AceView: Gene:NEDD4L, a comprehensive annotation of human, mouse and worm genes with mRNAs or ESTsAceView.

cDNA accession Links to the sequence	Tissue most 5' clones in red	Match mRNA	From bp to bp in mRNA	From bp to bp in accs.	Clone encodes complete protein (with AA variation)	Features	Anomalies detected by AceView	Accession match over (% length)	Base differences relative to genome (% identity)
DB473368	hippocampus	.a	1 to 400	1 to 399		tiling clone,		399/494 (80 %)	4 diff (99.2 %id)
NM_001144967.1		.a	1 to 8473	1 to 8473	exact	RefSeq,		8473/8473 (100 %)	0 diff (100 %id)
DR006335	Prostate	.a	213 to 960	1 to 748				748/748 (100 %)	4 diff (99.5 %id)
TI_1948087573		.a	274 to 1171	140 to 1043				904/1461 (61 %)	39 diff (97.4 %id)
TI_1948087735		.a	274 to 1087	137 to 950		tiling clone,		814/1427 (57 %)	20 diff (98.6 %id)
TI_1948088087		.a	274 to 1087	133 to 949				811/1387 (58 %)	7 diff (99.5 %id)
AY312514		.a	275 to 3202	1 to 2928		tiling clone,		2928/2928 (100 %)	2 diff (100.0 %id)
CV030811	mixed	.a	275 to 920	1 to 642				642/644 (99 %)	9 diff (98.7 %id)
DC376664	brain	.a	309 to 802	68 to 561				494/561 (88 %)	6 diff (99.0 %id)
DC377002	brain	.a	315 to 800	84 to 569				486/573 (84 %)	8 diff (98.7 %id)
DA698104		.a	320 to 859	20 to 559		capped		540/558 (96 %)	7 diff (98.8 %id)
AY243320	lung	.a	321 to 591	216 to 486				271/486 (55 %)	6 diff (98.8 %id)
DC348039	tongue, tumor tissue	.a	322 to 741	137 to 556				420/540 (77 %)	7 diff (98.8 %id)
DC376936	brain	.a	323 to 787	86 to 550				465/553 (84 %)	8 diff (98.6 %id)
DC377093	brain	.a	323 to 789	86 to 552				467/552 (84 %)	6 diff (99.0 %id)
DR002211	fetal brain	.a	340 to 1071	2 to 735				734/737 (99 %)	7 diff (99.1 %id)
CN314396	embryonic stem cells, cell lines H1, H7, andH9	.a	386 to 883	45 to 542				498/542 (91 %)	10 diff (98.2 %id)
BG476976	melanotic melanoma, skin	.a	574 to 1120	1 to 574				574/694 (82 %)	37 diff (94.7 %id)
CN314401	embryonic stem cells, DMSO-treated H9 cellline	.a	577 to 1000	1 to 425				425/425 (100 %)	1 diff (99.8 %id)
BE275776	melanotic melanoma, skin	.a	594 to 1179	1 to 583		available from MGC,		583/584 (99 %)	4 diff (99.4 %id)
BE391640	endometrium, adenocarcinoma cell line, uterus	.a	613 to 1134	66 to 588		available from MGC,		523/588 (88 %)	1 diff (99.9 %id)
CN314400	embryonic stem cells, cell lines H1, H7, andH9	.a	641 to 1153	1 to 514				514/514 (100 %)	1 diff (99.9 %id)
DA033772		.a	656 to 1230	2 to 576		capped		575/575 (100 %)	0 diff (100 %id)
BG468573	adenocarcinoma cell line, colon	.a	680 to 1542	1 to 858				858/858 (100 %)	19 diff (97.8 %id)
DA723953		.a	715 to 960	2 to 248		capped		247/250 (98 %)	4 diff (98.4 %id)
DA233323	brain	.a	719 to 1288	2 to 571		capped		570/570 (100 %)	1 diff (99.9 %id)
DA804923	brain	.a	749 to 1277	2 to 530		capped		529/529 (100 %)	0 diff (100 %id)
BP270109	small intestine	.a	901 to 1480	1 to 581				581/581 (100 %)	4 diff (99.4 %id)
BI049817	placenta_normal	.a	922 to 1229	317 to 11				307/317 (96 %)	1 diff (99.7 %id)
BF772767	epid_tumor	.a	927 to 1491	1 to 564				564/564 (100 %)	6 diff (99.0 %id)
BX370160	Placenta Cot 25-normalized	.a	960 to 1268	13 to 325				313/422 (74 %)	17 diff (96.0 %id)
CV376522	testis_normal	.a	1111 to 1325	216 to 2			Submitted on the opposite strand	215/216 (99 %)	14 diff (93.6 %id)
DC310841	cerebellum	.a	1208 to 1787	1 to 580				580/580 (100 %)	0 diff (100 %id)
EC496660	Prostate	.a	1267 to 1356	92 to 5				88/94 (93 %)	1 diff (99.0 %id)
BG540865	lung	.a	1313 to 1927	1 to 611				611/920 (66 %)	12 diff (98.7 %id)
BP333150	salivary gland	.a	1361 to 1938	1 to 578				578/578 (100 %)	0 diff (100 %id)
BX490418		.a	1418 to 2032	1 to 615				615/615 (100 %)	3 diff (99.6 %id)
DA803839	brain	.a	1454 to 1997	2 to 545		capped		544/544 (100 %)	0 diff (100 %id)
BG527782	lung, mucoepidermoid carcinoma	.a	1463 to 2149	1 to 687				687/687 (100 %)	2 diff (99.8 %id)
BX486688		.a	1486 to 2182	1 to 697				697/697 (100 %)	1 diff (99.9 %id)
BP283351	bone marrow	.a	1487 to 2068	1 to 583				583/583 (100 %)	7 diff (98.8 %id)
DA188888	amygdala	.a	1500 to 2057	2 to 559		capped		558/558 (100 %)	1 diff (99.9 %id)
BG769727	melanotic melanoma, high MDR (cell line), skin	.a	1503 to 2403	1 to 915				873/918 (95 %)	24 diff (97.4 %id)
DA186455	amygdala	.a	1511 to 2068	2 to 559		capped		558/558 (100 %)	1 diff (99.9 %id)
DA376798	thalamus	.a	1522 to 1869	2 to 349		capped		348/348 (100 %)	0 diff (100 %id)
BF690597	melanotic melanoma, high MDR, skin	.a	1522 to 2157	1 to 636				636/915 (69 %)	16 diff (98.3 %id)
AW363240	colon	.a	1534 to 1908	13 to 395				383/428 (89 %)	30 diff (93.0 %id)
BQ223500	large cell carcinoma, lung	.a	1551 to 2181	12 to 647				636/761 (83 %)	21 diff (97.3 %id)
BF978511	melanotic melanoma, high MDR, skin	.a	1565 to 2284	1 to 722				722/848 (85 %)	15 diff (98.3 %id)
BG496356	lung, mucoepidermoid carcinoma	.a	1570 to 2444	1 to 881				879/881 (99 %)	22 diff (97.6 %id)
BF976829	melanotic melanoma, high MDR, skin	.a	1613 to 2334	1 to 726				727/858 (84 %)	46 diff (94.7 %id)
BF697220	brain, primitive neuroectoderm	.a	1621 to 2223	1 to 605				605/858 (70 %)	15 diff (98.3 %id)
BI862468	breast, mammary adenocarcinoma, cell line	.a	1651 to 2391	28 to 767				740/767 (96 %)	9 diff (98.9 %id)
TI_57193343		.a	1651 to 2391	83 to 822				740/767 (96 %)	9 diff (98.9 %id)
BE961080	melanotic melanoma, high MDR, skin	.a	1677 to 2114	1 to 438				438/607 (72 %)	15 diff (97.6 %id)
AI424022	brain, glioblastoma (pooled)	.a	1715 to 1829	115 to 1				115/115 (100 %)	7 diff (94.0 %id)
BF979184	melanotic melanoma, high MDR, skin	.a	1745 to 2429	1 to 680				680/914 (74 %)	11 diff (98.8 %id)
AU119079	whole embryo, mainly head	.a	1748 to 2525	2 to 780		capped		779/779 (100 %)	7 diff (99.2 %id)
BF350618	head_neck	.a	1751 to 1958	1 to 206				206/208 (99 %)	7 diff (96.7 %id)
BI051922	placenta_normal	.a	1753 to 2175	1 to 422				422/422 (100 %)	1 diff (99.8 %id)
DA507391	brain	.a	1767 to 2316	2 to 550		capped		549/549 (100 %)	1 diff (99.9 %id)
AW860568	colon	.a	1780 to 2111	14 to 344				331/344 (96 %)	7 diff (98.0 %id)
AA838301	colon, colon tumor	.a	1812 to 2088	1 to 277				277/277 (100 %)	0 diff (100 %id)
DA770969	brain	.a	1828 to 2411	2 to 585		capped		584/584 (100 %)	2 diff (99.7 %id)
DA121210	cerebellum	.a	1849 to 2387	2 to 541		capped		540/540 (100 %)	1 diff (99.9 %id)
DA021698		.a	1859 to 2438	2 to 581		capped		580/580 (100 %)	0 diff (100 %id)
DA754970		.a	1865 to 2399	2 to 536		capped		535/535 (100 %)	0 diff (100 %id)
CN314397	embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells	.a	1992 to 2527	1 to 536				536/536 (100 %)	0 diff (100 %id)
BF573210	melanotic melanoma, high MDR, skin	.a	2045 to 2622	1 to 573				573/872 (65 %)	6 diff (99.4 %id)
CB152874	Liver	.a	2062 to 2604	1 to 543				543/543 (100 %)	0 diff (100 %id)
AA469388		.a	2068 to 2431	1 to 364				364/364 (100 %)	8 diff (97.9 %id)
AA579307		.a	2068 to 2370	1 to 303				303/304 (99 %)	7 diff (97.7 %id)
BP316994	pericardium	.a	2068 to 2650	1 to 582				582/583 (99 %)	11 diff (98.2 %id)
DA792115	brain	.a	2088 to 2642	2 to 555		capped		554/554 (100 %)	1 diff (99.9 %id)
CB149311	Liver	.a	2098 to 2724	1 to 627				627/627 (100 %)	1 diff (99.9 %id)
BX362375		.a	2108 to 2864	1 to 757				757/757 (100 %)	60 diff (92.1 %id)
BQ220579	embryonal carcinoma, cell line, testis	.a	2132 to 2930	1 to 804				804/864 (93 %)	15 diff (98.3 %id)
BE799929	lung, small cell carcinoma	.a	2144 to 2802	1 to 674				674/952 (70 %)	34 diff (96.5 %id)
DA781196	brain	.a	2170 to 2651	2 to 484		capped		483/483 (100 %)	1 diff (99.8 %id)
FN116732	breast carcinoma	.a	2197 to 2297	1 to 103				103/103 (100 %)	3 diff (97.1 %id)
BG122589	adenocarcinoma, cell line, Liver	.a	2198 to 2829	1 to 632				632/878 (71 %)	13 diff (98.6 %id)
CF140426	CNCAP(3)T-225 cell line, Prostate	.a	2230 to 2541	8 to 320				313/320 (97 %)	12 diff (96.3 %id)
T63391	lung	.a	2236 to 2338	1 to 103				103/109 (94 %)	2 diff (98.2 %id)
BM694251	eye, RPE and Choroid	.a	2265 to 2726	1 to 462			Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	462/462 (100 %)	0 diff (100 %id)
BP256830	Kidney	.a	2277 to 2858	1 to 582				582/582 (100 %)	1 diff (99.9 %id)
BF748562	breast_normal	.a	2278 to 2650	34 to 402				369/404 (91 %)	10 diff (97.6 %id)
AA469387		.a	2279 to 2626	380 to 33				347/380 (91 %)	0 diff (100 %id)
CB148891	Liver	.a	2281 to 2696	1 to 416				416/416 (100 %)	2 diff (99.6 %id)
BG251196	adenocarcinoma, cell line, Liver	.a	2294 to 3101	1 to 794				796/966 (82 %)	30 diff (96.9 %id)
BF689445	melanotic melanoma, high MDR (cell line), skin	.a	2296 to 2878	1 to 579		fully sequenced,		579/579 (100 %)	2 diff (99.7 %id)
TI_1948087574		.a	2336 to 3197	858 to 1				859/1188 (72 %)	33 diff (97.3 %id)
BE077637	breast	.a	2363 to 2739	25 to 402				378/402 (94 %)	10 diff (97.6 %id)
DA500284	brain	.a	2398 to 2971	2 to 575		capped		574/574 (100 %)	0 diff (100 %id)
BX282031	melanotic melanoma, skin	.a	2426 to 2918	1 to 493				493/493 (100 %)	0 diff (100 %id)
BQ215431	melanotic melanoma, skin	.a	2428 to 3266	1 to 844				844/845 (99 %)	9 diff (99.0 %id)
DA505908	brain	.a	2440 to 2985	2 to 548		capped		547/547 (100 %)	1 diff (99.9 %id)
BE708370	head_neck	.a	2442 to 2706	284 to 19				266/284 (93 %)	1 diff (99.7 %id)
DA513862	brain	.a	2482 to 3033	2 to 553		capped		552/552 (100 %)	1 diff (99.9 %id)
BE091676	breast	.a	2494 to 2815	1 to 322				322/322 (100 %)	3 diff (99.1 %id)
BG761215	melanotic melanoma, high MDR (cell line), skin	.a	2508 to 3443	1 to 948				948/970 (97 %)	29 diff (97.1 %id)
TI_1948087736		.a	2524 to 3205	810 to 127				684/1365 (50 %)	13 diff (99.1 %id)
TI_1948088088		.a	2524 to 3205	811 to 126				686/1354 (50 %)	12 diff (99.2 %id)
AA341248	Kidney	.a	2577 to 2882	9 to 314				306/314 (97 %)	6 diff (98.1 %id)
BG546670	lung	.a	2581 to 3088	1 to 507				507/507 (100 %)	1 diff (99.9 %id)
H06012	whole brain	.a	2587 to 2884	1 to 298			Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	298/298 (100 %)	0 diff (100 %id)
BE391083	endometrium, adenocarcinoma cell line, uterus	.a	2615 to 3185	1 to 571				571/572 (99 %)	1 diff (99.9 %id)
BE390022	endometrium, adenocarcinoma cell line, uterus	.a	2616 to 3225	1 to 609				609/611 (99 %)	4 diff (99.4 %id)
DA510755	brain	.a	2620 to 3189	2 to 572		capped		571/571 (100 %)	1 diff (99.9 %id)
R19498	whole brain	.a	2645 to 3018	1 to 374				374/374 (100 %)	2 diff (99.5 %id)
TI_149309079		.a	2646 to 3508	937 to 85		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	853/970 (87 %)	15 diff (98.5 %id)
BG534244	lung	.a	2663 to 3320	1 to 666				666/666 (100 %)	34 diff (94.9 %id)
T74302	whole brain	.a	2665 to 3187	1 to 526				524/528 (99 %)	9 diff (98.3 %id)
BE792440	lung, small cell carcinoma	.a	2673 to 3370	1 to 697		tiling clone,		697/697 (100 %)	2 diff (99.8 %id)
R07229	liver and spleen	.a	2676 to 3023	1 to 365				365/382 (95 %)	17 diff (95.6 %id)
W87678	liver and spleen	.a	2676 to 3146	1 to 479				477/479 (99 %)	8 diff (98.4 %id)
BM853023	Ascites, stomach	.a	2701 to 3226	1 to 525				525/525 (100 %)	5 diff (99.1 %id)
BX330935		.a	2706 to 3484	783 to 1				783/783 (100 %)	31 diff (96.1 %id)
DA796647	brain	.a	2715 to 3280	2 to 568		capped		567/567 (100 %)	2 diff (99.7 %id)
BX327480		.a	2730 to 3507	1 to 777				777/778 (99 %)	5 diff (99.4 %id)
TI_159719850		.a	2736 to 3521	915 to 132				784/1084 (72 %)	22 diff (98.0 %id)
TI_158432766		.a	2753 to 3507	838 to 86		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	753/917 (82 %)	17 diff (98.2 %id)
TI_157599955		.a	2762 to 3507	832 to 88		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	745/791 (94 %)	6 diff (99.3 %id)
DA172946	amygdala	.a	2793 to 3365	2 to 574		capped		573/573 (100 %)	0 diff (100 %id)
DA786348	brain	.a	2793 to 3370	2 to 579		capped		578/578 (100 %)	0 diff (100 %id)
CB108717	Liver	.a	2794 to 3281	1 to 488				488/488 (100 %)	0 diff (100 %id)
TI_154099689		.a	2797 to 3513	783 to 63		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	721/722 (99 %)	10 diff (98.7 %id)
AI810999	Prostate	.a	2798 to 2894	97 to 1				97/97 (100 %)	2 diff (98.0 %id)
BM999213	lung, Lung Focal Fibrosis	.a	2804 to 3428	19 to 637			Submitted on the opposite strand	619/623 (99 %)	9 diff (98.6 %id)
BU687509	lung	.a	2804 to 3508	724 to 19		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	706/706 (100 %)	1 diff (99.9 %id)
TI_149276618		.a	2820 to 3515	786 to 91		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	696/893 (77 %)	2 diff (99.8 %id)
BU677301	lung, Primary Lung Epithelial Cells	.a	2844 to 3515	688 to 17		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	672/672 (100 %)	1 diff (99.9 %id)
BF690387	melanotic melanoma, high MDR (cell line), skin	.a	2848 to 3592	746 to 1		fully sequenced,		746/746 (100 %)	13 diff (98.3 %id)
AA443004	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	2853 to 3288	1 to 436		fully sequenced,		436/436 (100 %)	2 diff (99.6 %id)
BM714998	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	2876 to 3506	1 to 631		fully sequenced, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	631/631 (100 %)	0 diff (100 %id)
AA621164	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	2879 to 3509	640 to 11		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	630/630 (100 %)	13 diff (98.0 %id)
CA441150	Fibrosarcoma	.a	2906 to 3513	628 to 19		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	610/610 (100 %)	2 diff (99.7 %id)
CF529208	placenta	.a	2909 to 3507	617 to 19		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	599/599 (100 %)	0 diff (100 %id)
TI_149307514		.a	2928 to 3506	667 to 91		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	577/962 (59 %)	16 diff (98.4 %id)
AW873034	adrenal gland, neuroblastoma	.a	2931 to 3517	587 to 1				587/591 (99 %)	2 diff (99.7 %id)
CF528594	placenta	.a	2937 to 3507	588 to 18		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	571/571 (100 %)	0 diff (100 %id)
BQ008198	Chondrosarcoma, Left Pubic Bone	.a	2940 to 3635	709 to 19		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	691/695 (99 %)	5 diff (99.3 %id)
AA778109	heart	.a	2968 to 3507	551 to 13		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	539/539 (100 %)	12 diff (97.8 %id)
CB113084	Liver	.a	2977 to 3234	1 to 258				258/258 (100 %)	3 diff (98.9 %id)
AW952846		.a	2986 to 3508	524 to 1			Submitted on the opposite strand	524/524 (100 %)	3 diff (99.5 %id)
BP239924	Liver	.a	3006 to 3620	1 to 615				615/615 (100 %)	7 diff (98.9 %id)
BG122854	adenocarcinoma, cell line, Liver	.a	3017 to 3659	1 to 644				644/946 (68 %)	10 diff (99.0 %id)
AA278729	germinal center B cell	.a	3033 to 3446	414 to 1				414/415 (99 %)	4 diff (99.1 %id)
DB542138	hippocampus	.a	3039 to 3515	1 to 477			Submitted on the opposite strand	477/477 (100 %)	1 diff (99.8 %id)
AW471484	colon, moderately-differentiated adenocarcinoma	.a	3039 to 3509	471 to 1				471/472 (99 %)	0 diff (100 %id)
BU733122	eye, RPE and Choroid	.a	3041 to 3509	487 to 19		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	469/469 (100 %)	1 diff (99.8 %id)
BM719578	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	3047 to 3517	1 to 471		fully sequenced,	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	471/471 (100 %)	1 diff (99.8 %id)
BM931700	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	3047 to 3515	1 to 469		fully sequenced,	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	469/469 (100 %)	0 diff (100 %id)
BP256666	Kidney	.a	3056 to 3638	1 to 583				583/583 (100 %)	0 diff (100 %id)
BM676699	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	3069 to 3506	457 to 19		fully sequenced, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	439/439 (100 %)	1 diff (99.8 %id)
AA610291	breast	.a	3077 to 3506	433 to 4				430/433 (99 %)	0 diff (100 %id)
BU558238	adenocarcinoma, cell line, breast	.a	3078 to 3506	1 to 430		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	430/430 (100 %)	5 diff (98.9 %id)
EC536489	Prostate	.a	3083 to 3184	1 to 101				101/101 (100 %)	3 diff (97.1 %id)
EC520451	Prostate	.a	3085 to 3184	1 to 97				97/97 (100 %)	3 diff (97.0 %id)
C75504		.a	3097 to 3511	413 to 4				410/414 (99 %)	0 diff (100 %id)
AU145505	whole embryo, mainly head	.a	3097 to 3635	534 to 1				534/581 (91 %)	8 diff (98.7 %id)
AW352301	head_neck	.a	3099 to 3417	21 to 337				317/337 (94 %)	6 diff (98.3 %id)
AW352302	head_neck	.a	3099 to 3417	317 to 1				317/320 (99 %)	2 diff (99.4 %id)
BF349410	head_neck	.a	3099 to 3403	315 to 12				304/318 (95 %)	0 diff (100 %id)
AA530951	normal prostatic epithelial cells, Prostate	.a	3099 to 3401	307 to 1				307/311 (98 %)	11 diff (96.5 %id)
DB537317	hippocampus	.a	3100 to 3515	1 to 416			Submitted on the opposite strand	416/416 (100 %)	3 diff (99.3 %id)
AI357376	brain, glioblastoma (pooled)	.a	3100 to 3506	418 to 11		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	408/691 (59 %)	13 diff (98.2 %id)
AW386064	pnet	.a	3103 to 3252	1 to 150				150/150 (100 %)	3 diff (98.0 %id)
BE928585	denis_drash	.a	3103 to 3252	1 to 150				150/150 (100 %)	3 diff (98.0 %id)
AI240561	liver and spleen	.a	3104 to 3511	410 to 3				408/410 (99 %)	0 diff (100 %id)
AA743916	Kidney	.a	3113 to 3629	517 to 1				517/517 (100 %)	5 diff (99.1 %id)
AI383935	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	3114 to 3509	406 to 11		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	396/396 (100 %)	0 diff (100 %id)
AI805240	Prostate	.a	3114 to 3515	402 to 1				402/402 (100 %)	0 diff (100 %id)
AW235527	Kidney	.a	3114 to 3518	408 to 4				405/408 (99 %)	0 diff (100 %id)
BF740124	brain, glioblastoma (pooled)	.a	3114 to 3506	393 to 1				393/393 (100 %)	1 diff (99.8 %id)
AI950165	anaplastic oligodendroglioma, brain	.a	3116 to 3511	414 to 19				396/414 (95 %)	0 diff (100 %id)
BF349406	head_neck	.a	3119 to 3417	1 to 297				297/297 (100 %)	2 diff (99.4 %id)
BP260852	small intestine	.a	3130 to 3704	1 to 575		tiling clone,		575/575 (100 %)	2 diff (99.7 %id)
BG399173	Kidney	.a	3132 to 3657	1 to 525				525/805 (65 %)	4 diff (99.6 %id)
AI377528	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	3133 to 3517	385 to 1				385/385 (100 %)	0 diff (100 %id)
BM998044	lung, Metastatic Chondrosarcoma	.a	3139 to 3635	515 to 19		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	497/497 (100 %)	0 diff (100 %id)
AI202695	Prostate	.a	3140 to 3629	490 to 1				490/490 (100 %)	0 diff (100 %id)
EC555523	Prostate	.a	3155 to 3256	1 to 101				101/105 (96 %)	3 diff (97.2 %id)
W87762	liver and spleen	.a	3163 to 3506	344 to 1				344/345 (99 %)	5 diff (98.6 %id)
CN314398	embryonic stem cells, DMSO-treated H9 cellline	.a	3165 to 3515	1 to 351		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	351/351 (100 %)	4 diff (98.9 %id)
BE275030	melanotic melanoma, skin	.a	3169 to 3511	1 to 343				343/345 (99 %)	1 diff (99.8 %id)
AI868734	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	3170 to 3509	340 to 1				340/340 (100 %)	0 diff (100 %id)
C15964		.a	3171 to 3471	1 to 300				300/300 (100 %)	2 diff (99.4 %id)
AI670111	Prostate	.a	3177 to 3639	465 to 3				463/465 (99 %)	0 diff (100 %id)
R07177	liver and spleen	.a	3180 to 3507	335 to 4				332/337 (98 %)	0 diff (100 %id)
BF589563	Prostate	.a	3186 to 3635	452 to 3				450/452 (99 %)	0 diff (100 %id)
TI_57242470		.a	3191 to 3660	24 to 493				470/827 (56 %)	4 diff (99.6 %id)
AA443082		.a	3195 to 3587	1 to 392				392/392 (100 %)	1 diff (99.8 %id)
BI917877	brain	.a	3196 to 3660	1 to 465				465/799 (58 %)	4 diff (99.5 %id)
BQ679080	melanotic melanoma, cell line, skin	.a	3197 to 3509	1 to 313		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	313/313 (100 %)	0 diff (100 %id)
AA737673	germinal center B cell	.a	3213 to 3639	430 to 5				426/430 (99 %)	0 diff (100 %id)
AA825696	germinal center B cell	.a	3236 to 3639	408 to 5				404/408 (99 %)	0 diff (100 %id)
AI826248	normal prostate, Prostate	.a	3238 to 3629	415 to 24		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	392/392 (100 %)	1 diff (99.8 %id)
AA564169	normal prostate, Prostate	.a	3251 to 3510	258 to 1				258/258 (100 %)	2 diff (99.3 %id)
AA463445	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	3258 to 3519	260 to 1		fully sequenced,		260/260 (100 %)	7 diff (97.4 %id)
BM675510	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	3292 to 3515	242 to 19		fully sequenced, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	224/224 (100 %)	0 diff (100 %id)
AI961598	uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors	.a	3293 to 3636	343 to 1				343/343 (100 %)	1 diff (99.8 %id)
BM682883	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	3293 to 3515	242 to 19		fully sequenced, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	224/224 (100 %)	1 diff (99.6 %id)
AI434837	Kidney	.a	3298 to 3637	341 to 1				341/341 (100 %)	3 diff (99.2 %id)
BG272030	normal head/neck tissue	.a	3308 to 3505	261 to 64		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	198/223 (88 %)	0 diff (100 %id)
BU072968	insulinoma, Pancreas	.a	3312 to 3839	3 to 529		fully sequenced,		527/529 (99 %)	6 diff (98.9 %id)
AA705020	liver and spleen	.a	3326 to 3506	181 to 2				180/181 (99 %)	0 diff (100 %id)
T63535	lung	.a	3340 to 3465	129 to 3				127/129 (98 %)	0 diff (100 %id)
BE327823	malignant melanoma, metastatic to lymphnode, skin	.a	3343 to 3509	181 to 13		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	169/170 (99 %)	5 diff (97.1 %id)
AW992108	breast_normal	.a	3354 to 3575	1 to 222				222/222 (100 %)	2 diff (99.1 %id)
BF816627	colon_ins	.a	3374 to 3923	553 to 6			Submitted on the opposite strand	548/553 (99 %)	37 diff (93.4 %id)
AV727203	hypothalamus	.a	3386 to 4044	1 to 661				661/661 (100 %)	14 diff (97.9 %id)
EC446361	Prostate	.a	3399 to 3506	118 to 11		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	108/108 (100 %)	3 diff (97.3 %id)
T25138		.a	3403 to 3507	107 to 4				104/107 (97 %)	0 diff (100 %id)
DA082744	cerebellum	.a	3403 to 3978	2 to 579		capped		578/578 (100 %)	2 diff (99.7 %id)
H05963	whole brain	.a	3410 to 3635	246 to 21		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	226/226 (100 %)	2 diff (99.2 %id)
EC577811	Prostate	.a	3412 to 3515	102 to 1				102/102 (100 %)	2 diff (98.1 %id)
BG055218	Prostate	.a	3425 to 3639	219 to 5				215/219 (98 %)	0 diff (100 %id)
AW630620	2 pooled high-grade transitional celltumors, genitourinary tract	.a	3437 to 3864	1 to 429				429/429 (100 %)	1 diff (99.8 %id)
EC527519	Prostate	.a	3450 to 3506	1 to 58				58/59 (98 %)	3 diff (95.0 %id)
AF070601	brain	.a	3468 to 5090	1 to 1624		tiling clone, AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	1624/1624 (100 %)	3 diff (99.9 %id)
EC553758	Prostate	.a	3469 to 3569	96 to 1				96/101 (95 %)	7 diff (93.1 %id)
BQ000605	Fibrosarcoma	.a	3530 to 4337	819 to 19		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	801/804 (99 %)	8 diff (99.1 %id)
AA902439	carcinoid, lung	.a	3659 to 4075	1 to 417			Submitted on the opposite strand	417/417 (100 %)	1 diff (99.8 %id)
T82420	lung	.a	3660 to 3892	1 to 236				236/236 (100 %)	3 diff (98.8 %id)
AI700448	pooled	.a	3660 to 4179	1 to 521			Submitted on the opposite strand	521/521 (100 %)	4 diff (99.3 %id)
DA416288	thalamus	.a	3667 to 4199	2 to 534		capped		533/533 (100 %)	1 diff (99.9 %id)
AI247502	liver and spleen	.a	3682 to 4031	1 to 350			Submitted on the opposite strand	350/350 (100 %)	1 diff (99.8 %id)
H54325	liver and spleen	.a	3711 to 4081	1 to 372			Submitted on the opposite strand	372/377 (98 %)	2 diff (99.5 %id)
AI222939	carcinoid, lung	.a	3714 to 4139	1 to 426			Submitted on the opposite strand	426/426 (100 %)	1 diff (99.8 %id)
BU070956	insulinoma, Pancreas	.a	3809 to 4327	547 to 30		fully sequenced, AAA		518/529 (97 %)	5 diff (99.1 %id)
CA312089	Human Lung Epithelial cells, lung	.a	3818 to 4494	695 to 19		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	677/677 (100 %)	0 diff (100 %id)
CB120066	Liver	.a	3819 to 4267	1 to 449				449/449 (100 %)	1 diff (99.8 %id)
DB560788	hypothalamus	.a	3881 to 4337	1 to 457			Submitted on the opposite strand	457/457 (100 %)	8 diff (98.3 %id)
U57844	eye	.a	3886 to 4645	1 to 762				762/762 (100 %)	3 diff (99.7 %id)
R52394	whole brain	.a	3886 to 4275	1 to 392				392/392 (100 %)	4 diff (99.0 %id)
BF207897	bladder, carcinoma, cell line	.a	3904 to 4619	1 to 708				708/708 (100 %)	26 diff (96.4 %id)
TI_149283582		.a	3906 to 4584	774 to 96		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	679/679 (100 %)	2 diff (99.8 %id)
BU680215	lung, Primary Lung Epithelial Cells	.a	3927 to 4584	674 to 17		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	658/658 (100 %)	0 diff (100 %id)
DA800863	brain	.a	4008 to 4501	2 to 496		capped		495/495 (100 %)	1 diff (99.8 %id)
EC565798	Prostate	.a	4015 to 4122	9 to 116				108/116 (93 %)	0 diff (100 %id)
AV749561	Pituitary	.a	4072 to 4612	1 to 540				540/547 (98 %)	19 diff (96.6 %id)
BM930532	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	4078 to 4590	520 to 8			Submitted on the opposite strand	513/523 (98 %)	0 diff (100 %id)
TI_151761684		.a	4078 to 4596	61 to 580			Submitted on the opposite strand	520/982 (52 %)	6 diff (99.4 %id)
FN073799	breast carcinoma	.a	4153 to 4205	53 to 1			Submitted on the opposite strand	53/54 (98 %)	0 diff (100 %id)
AL533812	brain, fetal brain	.a	4164 to 5090	1 to 927		AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	927/927 (100 %)	2 diff (99.8 %id)
D12450	Liver	.a	4177 to 4330	12 to 165				154/165 (93 %)	6 diff (96.4 %id)
AA234837	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	4188 to 4593	1 to 406				406/406 (100 %)	0 diff (100 %id)
FN132570	breast carcinoma	.a	4207 to 4290	1 to 85				85/85 (100 %)	5 diff (94.2 %id)
R43846	whole brain	.a	4210 to 4407	207 to 10				198/207 (95 %)	0 diff (100 %id)
TI_154100690		.a	4259 to 5090	913 to 84		AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	830/830 (100 %)	14 diff (98.4 %id)
T87668	liver and spleen	.a	4299 to 4494	1 to 200				200/200 (100 %)	4 diff (98.0 %id)
W02425	liver and spleen	.a	4299 to 4841	1 to 544		fully sequenced,		544/544 (100 %)	5 diff (99.1 %id)
AA203683	liver and spleen	.a	4299 to 4929	1 to 621				621/625 (99 %)	14 diff (97.8 %id)
BU608769	Human Lung Epithelial cells, lung	.a	4301 to 5108	806 to 1				806/806 (100 %)	2 diff (99.8 %id)
BU861297	mixed (pool of 40 RNAs)	.a	4317 to 5055	1 to 750		AAA		750/793 (94 %)	15 diff (98.2 %id)
BG282803	adenocarcinoma, cell line, Prostate	.a	4323 to 5107	1 to 775				775/977 (79 %)	20 diff (98.0 %id)
AA329323		.a	4326 to 4643	1 to 319				319/319 (100 %)	1 diff (99.7 %id)
AW958128		.a	4327 to 4644	1 to 318				318/476 (66 %)	1 diff (99.8 %id)
BQ019007	lung, Metastatic Chondrosarcoma	.a	4338 to 5108	770 to 1				770/770 (100 %)	1 diff (99.9 %id)
DA400526	thalamus	.a	4357 to 4902	2 to 548		capped		547/547 (100 %)	1 diff (99.9 %id)
AA011264	liver and spleen	.a	4381 to 4726	10 to 361		fully sequenced,		352/361 (97 %)	6 diff (98.4 %id)
BE172039	head_neck	.a	4406 to 4725	325 to 7			Submitted on the opposite strand	319/408 (78 %)	0 diff (100 %id)
N28958	melanocyte	.a	4408 to 4811	1 to 408				408/502 (81 %)	11 diff (97.9 %id)
FN080889	breast carcinoma	.a	4420 to 4521	105 to 1			Submitted on the opposite strand	105/105 (100 %)	5 diff (95.3 %id)
AA025995	heart	.a	4450 to 4814	1 to 370		fully sequenced,		370/370 (100 %)	6 diff (98.4 %id)
W27827	eye, retina	.a	4453 to 4954	20 to 526				507/572 (88 %)	14 diff (97.6 %id)
BF678730	Prostate	.a	4477 to 5112	1 to 635				635/749 (84 %)	14 diff (98.2 %id)
CA441492	Fibrosarcoma	.a	4492 to 5108	617 to 1				617/617 (100 %)	0 diff (100 %id)
AA026694	heart	.a	4497 to 4726	1 to 231		fully sequenced,		231/231 (100 %)	0 diff (100 %id)
CB163112	Liver	.a	4513 to 5082	570 to 1			Submitted on the opposite strand	570/570 (100 %)	0 diff (100 %id)
T70131	lung	.a	4519 to 4949	1 to 439				439/443 (99 %)	15 diff (96.7 %id)
BF001583	colon, colon tumor, RER+	.a	4532 to 5092	561 to 1				561/561 (100 %)	2 diff (99.7 %id)
AW195564	pooled	.a	4543 to 5091	549 to 1				549/549 (100 %)	0 diff (100 %id)
AI927330	Kidney	.a	4545 to 5090	547 to 1				547/547 (100 %)	7 diff (98.8 %id)
DB310057. matches multiple genes	hippocampus	.a	4551 to 5090	540 to 1			also hits gene foger	540/540 (100 %)	1 diff (99.9 %id)
AI470245	pooled	.a	4551 to 5089	534 to 1				534/535 (99 %)	19 diff (96.5 %id)
AI193021	lung	.a	4561 to 5089	529 to 1				529/532 (99 %)	0 diff (100 %id)
BM931496	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	4562 to 4831	1 to 270				270/271 (99 %)	1 diff (99.7 %id)
AW006880	Kidney	.a	4574 to 5090	518 to 1				518/518 (100 %)	1 diff (99.9 %id)
AW466909	2 pooled tumors (clear cell type), Kidney	.a	4575 to 5059	485 to 1				485/485 (100 %)	4 diff (99.2 %id)
H54115	liver and spleen	.a	4579 to 5024	453 to 1			Submitted on the opposite strand	453/455 (99 %)	23 diff (95.0 %id)
AI261929	Kidney	.a	4631 to 5092	462 to 1				462/462 (100 %)	0 diff (100 %id)
AI830864	lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic)	.a	4631 to 5103	474 to 1				474/474 (100 %)	3 diff (99.4 %id)
BF431697	Kidney	.a	4632 to 5093	462 to 1				462/462 (100 %)	8 diff (98.3 %id)
AI141446	heart	.a	4634 to 5091	458 to 1				458/458 (100 %)	0 diff (100 %id)
BE857409	brain, glioblastoma (pooled)	.a	4641 to 5086	446 to 1				446/446 (100 %)	2 diff (99.6 %id)
AA680108	liver and spleen	.a	4643 to 5090	449 to 1				449/449 (100 %)	5 diff (98.9 %id)
DA121096	cerebellum	.a	4647 to 5092	2 to 447		capped		446/446 (100 %)	0 diff (100 %id)
AI248492	liver and spleen	.a	4653 to 5092	440 to 1				440/440 (100 %)	0 diff (100 %id)
AW295781		.a	4682 to 5107	426 to 1				426/436 (97 %)	3 diff (99.4 %id)
BM716759	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	4687 to 5090	1 to 404		fully sequenced, AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	404/404 (100 %)	0 diff (100 %id)
AI635710	Kidney	.a	4692 to 5090	397 to 1				397/397 (100 %)	4 diff (99.0 %id)
AW299645	Kidney	.a	4694 to 5102	409 to 1				409/409 (100 %)	3 diff (99.3 %id)
AA026600	heart	.a	4696 to 5091	395 to 1		fully sequenced,		395/395 (100 %)	6 diff (98.5 %id)
AA723458	heart	.a	4701 to 5109	409 to 1				409/412 (99 %)	7 diff (98.4 %id)
AA011345	liver and spleen	.a	4711 to 5090	385 to 1		fully sequenced,		385/385 (100 %)	7 diff (98.2 %id)
AI610777	serous papillary carcinoma, high grade, 2pooled tumors, uterus	.a	4713 to 5111	399 to 1				399/399 (100 %)	2 diff (99.5 %id)
AW613877	2 pooled high-grade transitional celltumors, genitourinary tract	.a	4715 to 5091	377 to 1				377/377 (100 %)	0 diff (100 %id)
AW182269	pooled	.a	4718 to 5111	394 to 1				394/394 (100 %)	6 diff (98.5 %id)
AI141085	lung	.a	4719 to 5110	392 to 1				392/392 (100 %)	1 diff (99.8 %id)
AA522637	metastatic prostate bone lesion	.a	4726 to 5113	390 to 1				390/391 (99 %)	3 diff (99.3 %id)
R52395	whole brain	.a	4730 to 5086	365 to 1				365/367 (99 %)	21 diff (94.3 %id)
AA887169	metastatic prostate bone lesion	.a	4733 to 5101	369 to 1				369/369 (100 %)	4 diff (99.0 %id)
AA522666	metastatic prostate bone lesion	.a	4737 to 5115	379 to 1				379/379 (100 %)	7 diff (98.2 %id)
AI264097	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	4743 to 5106	364 to 1				364/364 (100 %)	0 diff (100 %id)
N67852	melanocyte	.a	4747 to 5095	352 to 1				352/352 (100 %)	8 diff (97.8 %id)
BM724126	eye, fetal eye	.a	4747 to 5093	347 to 1			Submitted on the opposite strand	347/355 (97 %)	0 diff (100 %id)
TI_151757336		.a	4750 to 5093	70 to 413			Submitted on the opposite strand	344/967 (35 %)	2 diff (99.8 %id)
AA669439	lung, lung carcinoma	.a	4775 to 5055	280 to 1				280/280 (100 %)	1 diff (99.7 %id)
AA025936	heart	.a	4784 to 5118	336 to 1		fully sequenced,		336/336 (100 %)	1 diff (99.8 %id)
AA235280	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	4790 to 5084	298 to 4				295/298 (98 %)	0 diff (100 %id)
AA927208	pooled	.a	4790 to 5107	317 to 1				317/317 (100 %)	2 diff (99.4 %id)
AA723696	pooled	.a	4807 to 5090	284 to 1				284/284 (100 %)	4 diff (98.6 %id)
T82421	lung	.a	4809 to 5065	255 to 1				255/255 (100 %)	3 diff (98.9 %id)
N73589	liver and spleen	.a	4811 to 5086	279 to 1		fully sequenced,		279/279 (100 %)	9 diff (96.8 %id)
DA105175	cerebellum	.a	4813 to 5363	2 to 552		capped		551/551 (100 %)	1 diff (99.9 %id)
DA403162	thalamus	.a	4813 to 5132	2 to 320		capped		319/319 (100 %)	1 diff (99.7 %id)
AA777894	liver and spleen	.a	4830 to 5086	257 to 1				257/257 (100 %)	1 diff (99.7 %id)
AA458578		.a	4831 to 5107	277 to 1				277/277 (100 %)	1 diff (99.7 %id)
AI202377	Prostate	.a	4833 to 5110	278 to 1				278/278 (100 %)	2 diff (99.3 %id)
AI373225	Kidney	.a	4842 to 5101	260 to 1				260/260 (100 %)	0 diff (100 %id)
AI699943	pooled germ cell tumors	.a	4845 to 5096	252 to 1				252/252 (100 %)	2 diff (99.3 %id)
DA809837	brain	.a	4868 to 5232	2 to 366		capped		365/365 (100 %)	0 diff (100 %id)
BM674388	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.a	4873 to 5108	236 to 1		fully sequenced,	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	236/236 (100 %)	0 diff (100 %id)
AA777465	liver and spleen	.a	4880 to 5086	207 to 1				207/207 (100 %)	0 diff (100 %id)
AA327282	colon	.a	4891 to 5090	1 to 200				200/200 (100 %)	0 diff (100 %id)
AW952304		.a	4906 to 5090	1 to 185		AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	185/185 (100 %)	0 diff (100 %id)
AA775172	lung	.a	4912 to 5059	148 to 1				148/148 (100 %)	0 diff (100 %id)
AI971337	Prostate	.a	4915 to 5091	177 to 1				177/177 (100 %)	3 diff (98.4 %id)
DA759940		.a	4956 to 5251	2 to 297		capped		296/296 (100 %)	0 diff (100 %id)
DA127964	cerebellum	.a	4994 to 5605	2 to 616		capped		615/615 (100 %)	4 diff (99.4 %id)
AA807359	brain, substantia nigra	.a	5006 to 5090	85 to 1				85/85 (100 %)	0 diff (100 %id)
DB220184	trachea	.a	5007 to 5232	2 to 229		capped		228/228 (100 %)	2 diff (99.2 %id)
AI694733	carcinoid, lung	.a	5051 to 5370	1 to 319			Submitted on the opposite strand	319/319 (100 %)	3 diff (99.1 %id)
DA798209	brain	.a	5088 to 5657	2 to 571		tiling clone, capped		570/570 (100 %)	0 diff (100 %id)
BF947711	nervous_normal	.a	5097 to 5267	171 to 1				171/212 (80 %)	1 diff (99.6 %id)
BF947673	nervous_normal	.a	5110 to 5267	160 to 1				160/160 (100 %)	3 diff (98.2 %id)
DA721262		.a	5110 to 5653	2 to 547		capped		546/547 (99 %)	3 diff (99.5 %id)
CR596491	fetal brain	.a	5132 to 8432	1 to 3301		tiling clone,		3301/3301 (100 %)	0 diff (100 %id)
AL536554	brain, fetal brain	.a	5132 to 6061	1 to 924				924/924 (100 %)	34 diff (96.4 %id)
DA399740	thalamus	.a	5157 to 5722	2 to 567		capped		566/566 (100 %)	3 diff (99.5 %id)
DA298006	hippocampus	.a	5218 to 5789	2 to 573		capped		572/572 (100 %)	0 diff (100 %id)
DA519095	brain	.a	5281 to 5832	2 to 553		capped		552/552 (100 %)	0 diff (100 %id)
DA744208		.a	5316 to 5858	2 to 545		capped		544/544 (100 %)	3 diff (99.5 %id)
DA505801	brain	.a	5414 to 5977	2 to 566		capped		565/565 (100 %)	2 diff (99.7 %id)
DA804970	brain	.a	5440 to 5947	2 to 509		capped		508/508 (100 %)	2 diff (99.7 %id)
DA776915	brain	.a	5448 to 6020	2 to 574		capped		573/573 (100 %)	2 diff (99.7 %id)
DA125893	cerebellum	.a	5478 to 6054	2 to 578		capped		577/577 (100 %)	0 diff (100 %id)
R06676	liver and spleen	.a	5556 to 5837	1 to 291				291/300 (97 %)	15 diff (95.0 %id)
DA770862	brain	.a	5568 to 6019	2 to 453		capped		452/452 (100 %)	0 diff (100 %id)
DA771165	brain	.a	5571 to 6130	2 to 561		capped		560/560 (100 %)	1 diff (99.9 %id)
CN411821	embryonic stem cells, cell lines H1, H7, andH9	.a	5587 to 6188	1 to 601				601/601 (100 %)	2 diff (99.7 %id)
DA252005	caudate nucleus	.a	5609 to 6125	2 to 518		capped		517/517 (100 %)	2 diff (99.7 %id)
DA789230	brain	.a	5611 to 6188	2 to 580		capped		579/579 (100 %)	3 diff (99.5 %id)
AA865857	pooled germ cell tumors	.a	5671 to 6019	357 to 6				352/357 (98 %)	0 diff (100 %id)
DA538198	Kidney	.a	5689 to 6285	2 to 598		capped		597/597 (100 %)	2 diff (99.7 %id)
DA732786		.a	5704 to 6454	2 to 767		capped		766/811 (94 %)	30 diff (96.4 %id)
DA493614	brain	.a	5718 to 6213	2 to 498		capped		497/497 (100 %)	4 diff (99.2 %id)
BM450162	melanotic melanoma, skin	.a	5949 to 6848	1 to 912				912/1053 (86 %)	23 diff (97.9 %id)
BX451725	brain, fetal brain	.a	5958 to 6887	1 to 918				918/918 (100 %)	31 diff (96.7 %id)
DA174698	amygdala	.a	6031 to 6566	2 to 537		capped		536/536 (100 %)	1 diff (99.9 %id)
DA285656	corpus callosum	.a	6244 to 6733	2 to 491		capped		490/490 (100 %)	1 diff (99.8 %id)
DA279966	corpus callosum	.a	6304 to 6871	2 to 569		capped		568/568 (100 %)	1 diff (99.9 %id)
BF130205	hypernephroma, Kidney	.a	6396 to 6973	1 to 570				570/811 (70 %)	36 diff (95.6 %id)
BX477901		.a	6432 to 6928	1 to 497				497/497 (100 %)	1 diff (99.8 %id)
N20570	melanocyte	.a	6432 to 6611	350 to 172				179/350 (51 %)	0 diff (100 %id)
BG433889	Kidney	.a	6482 to 7217	1 to 740				740/840 (88 %)	24 diff (97.2 %id)
BU189172	melanotic melanoma, skin	.a	6487 to 7320	1 to 841				841/841 (100 %)	14 diff (98.4 %id)
DA009377	adrenal gland	.a	6497 to 7053	2 to 558		capped		557/562 (99 %)	2 diff (99.7 %id)
AL534493	brain, fetal brain	.a	6577 to 7375	1 to 801				801/801 (100 %)	7 diff (99.2 %id)
BM697669	eye, fetal eyes	.a	6791 to 7250	1 to 460				460/460 (100 %)	0 diff (100 %id)
BX433254	brain, fetal brain	.a	6817 to 7670	853 to 1				853/854 (99 %)	3 diff (99.7 %id)
Z44547	brain, total brain	.a	6830 to 7091	1 to 262				262/262 (100 %)	0 diff (100 %id)
BG565914	Liver	.a	6862 to 7588	1 to 740				740/745 (99 %)	27 diff (96.4 %id)
BF738151	bladder_tumor	.a	6864 to 7155	13 to 306				294/306 (96 %)	6 diff (98.1 %id)
BF822549	kidney_tumor	.a	6864 to 7155	13 to 306				294/306 (96 %)	6 diff (98.1 %id)
BI860472	breast, mammary adenocarcinoma, cell line	.a	6871 to 7599	1 to 730				730/730 (100 %)	9 diff (98.8 %id)
TI_57189426		.a	6871 to 7599	49 to 778				730/730 (100 %)	9 diff (98.8 %id)
BM757845	stomach	.a	6875 to 7449	1 to 575				575/575 (100 %)	0 diff (100 %id)
BM783736	stomach	.a	6875 to 7583	1 to 709				709/709 (100 %)	0 diff (100 %id)
H19222	whole brain	.a	6876 to 7309	1 to 442			Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	442/445 (99 %)	12 diff (97.4 %id)
H23299	whole brain	.a	6912 to 7409	1 to 503				503/504 (99 %)	10 diff (98.1 %id)
Z45896	brain, total brain	.a	6917 to 7147	1 to 231				231/231 (100 %)	0 diff (100 %id)
W27737	eye, retina	.a	6924 to 7389	25 to 489				465/523 (88 %)	26 diff (95.1 %id)
BG334421	melanotic melanoma, skin	.a	7081 to 7792	1 to 719				719/929 (77 %)	28 diff (97.0 %id)
H65137	nose, olfactory epithelium	.a	7133 to 7569	1 to 441				441/446 (98 %)	26 diff (94.2 %id)
AA425069	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.a	7138 to 7588	1 to 451				451/451 (100 %)	0 diff (100 %id)
AA089790		.a	7180 to 7446	1 to 268				268/269 (99 %)	10 diff (96.3 %id)
AL565536	brain, fetal brain	.a	7586 to 8406	856 to 36				821/860 (95 %)	0 diff (100 %id)
DB364413		.a	7886 to 8461	573 to 1				573/575 (99 %)	12 diff (98.0 %id)
DB317092	brain	.a	7919 to 8473	555 to 1		tiling clone,		555/555 (100 %)	0 diff (100 %id)
DB295215	adrenal gland	.a	7923 to 8461	539 to 1				539/539 (100 %)	0 diff (100 %id)
H19223	whole brain	.a	8036 to 8471	469 to 13		AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	457/459 (99 %)	28 diff (93.9 %id)
H23185	whole brain	.a	8069 to 8478	423 to 2				422/480 (87 %)	0 diff (100 %id)
Z41523	brain, total brain	.a	8198 to 8461	264 to 1				264/264 (100 %)	0 diff (100 %id)
H65091	nose, olfactory epithelium	.a	8286 to 8441	156 to 1				156/156 (100 %)	0 diff (100 %id)
NM_015277.4		.b	1 to 8413	1 to 8413	exact	RefSeq,		8413/8413 (100 %)	0 diff (100 %id)
AB071179		.b	161 to 5030	1 to 4871		tiling clone,		4871/4871 (100 %)	3 diff (100.0 %id)
BC000621	Skin, melanotic melanoma.	.b	575 to 3575	1 to 3001		tiling clone, available from MGC, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	3001/3001 (100 %)	0 diff (100 %id)
BC019345	Uterus, endometrium adenocarcinoma	.b	575 to 3575	1 to 3001		available from MGC, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	3001/3001 (100 %)	0 diff (100 %id)
BM557441	melanotic melanoma, skin	.b	592 to 1469	22 to 913				892/1076 (82 %)	32 diff (97.1 %id)
BG490588	large cell carcinoma, lung	.b	879 to 1592	1 to 721				717/848 (84 %)	20 diff (97.7 %id)
AW996429	breast_normal	.b	994 to 1388	1 to 395				395/395 (100 %)	4 diff (99.0 %id)
DA244881	brain	.b	1107 to 1637	2 to 532		capped		531/531 (100 %)	0 diff (100 %id)
DA046787		.b	1146 to 1922	2 to 778		capped		777/785 (98 %)	1 diff (99.9 %id)
BG770416	melanotic melanoma, high MDR (cell line), skin	.b	1154 to 2058	1 to 902				902/950 (94 %)	22 diff (97.7 %id)
CD655521	Embryonic Stem cells	.b	1249 to 2058	5 to 813				809/814 (99 %)	11 diff (98.7 %id)
DA092274	cerebellum	.b	1260 to 1825	2 to 568		capped		567/567 (100 %)	6 diff (99.0 %id)
BF196851	brain, glioblastoma (pooled)	.b	1276 to 1772	497 to 1				497/497 (100 %)	0 diff (100 %id)
BQ643568	hepatocellular carcinoma, cell line, Liver	.c	1 to 359	1 to 359		tiling clone,		359/1302 (27 %)	2 diff (99.9 %id)
BC032597	Skin, melanotic melanoma.	.c	13 to 3351	11 to 3351		tiling clone, available from MGC, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	3341/3341 (100 %)	10 diff (99.8 %id)
BM453891	melanotic melanoma, skin	.c	14 to 821	1 to 813				813/879 (92 %)	17 diff (98.1 %id)
DR003384	fetal brain	.c	21 to 364	1 to 345				345/609 (56 %)	12 diff (98.1 %id)
BG122821	adenocarcinoma, cell line, Liver	.c	526 to 1235	1 to 731				645/964 (66 %)	48 diff (95.1 %id)
AY112984		.d	1 to 3411	1 to 3410	A44P	tiling clone,		3410/3410 (100 %)	2 diff (100.0 %id)
NM_001144968.1		.d	1 to 8378	1 to 8378	exact	RefSeq,		8378/8378 (100 %)	0 diff (100 %id)
BF965237	muscle (skeletal)	.e	1 to 329	1 to 329		tiling clone,		329/701 (46 %)	4 diff (99.5 %id)
DQ181796		.e	15 to 3431	1 to 3417	exact	tiling clone,		3417/3417 (100 %)	0 diff (100 %id)
NM_001144971.1		.e	15 to 8420	1 to 8406	exact	RefSeq,		8406/8406 (100 %)	0 diff (100 %id)
BF678906	Prostate	.f	1 to 653	1 to 649		tiling clone, AAA		649/649 (100 %)	11 diff (98.4 %id)
NM_001144969.1		.f	15 to 8332	1 to 8318	exact	RefSeq,		8318/8318 (100 %)	0 diff (100 %id)
AY112985		.f	19 to 3365	9 to 3354	A44P	tiling clone,		3346/3354 (99 %)	9 diff (99.8 %id)
AY112983		.g	1 to 3421	1 to 3420	A18P	tiling clone,		3420/3420 (100 %)	2 diff (100.0 %id)
NM_001144965.1		.g	1 to 8388	1 to 8388	exact	RefSeq,		8388/8388 (100 %)	0 diff (100 %id)
DC381911	placenta	.h	1 to 554	1 to 554		tiling clone,		554/554 (100 %)	0 diff (100 %id)
AY243319	lung	.h	14 to 431	1 to 418				418/418 (100 %)	0 diff (100 %id)
DC363885		.h	14 to 576	1 to 563				563/563 (100 %)	0 diff (100 %id)
NM_001144966.1		.h	14 to 8313	1 to 8300	exact	RefSeq,		8300/8300 (100 %)	0 diff (100 %id)
DC416485	trachea	.h	17 to 577	1 to 561				561/561 (100 %)	0 diff (100 %id)
DC299395		.h	47 to 609	1 to 563				563/563 (100 %)	0 diff (100 %id)
AK300444	placenta	.h	50 to 3351	1 to 3302	N524S	tiling clone,		3302/3307 (99 %)	4 diff (99.9 %id)
DC299077		.h	50 to 610	1 to 562				562/562 (100 %)	1 diff (99.9 %id)
DC300340		.h	50 to 617	1 to 568				568/568 (100 %)	0 diff (100 %id)
DC300402		.h	50 to 578	1 to 529				529/529 (100 %)	0 diff (100 %id)
DW447811	Liver	.h	50 to 236	17 to 203				187/211 (88 %)	3 diff (98.6 %id)
BP237554	Liver	.h	50 to 672	1 to 623				623/623 (100 %)	0 diff (100 %id)
CB108765	Liver	.h	50 to 650	1 to 601				601/601 (100 %)	2 diff (99.7 %id)
DC381620	placenta	.h	50 to 640	1 to 591				591/593 (99 %)	1 diff (99.9 %id)
DC381975	placenta	.h	50 to 590	1 to 541				541/541 (100 %)	0 diff (100 %id)
DC382211	placenta	.h	50 to 595	1 to 547				547/547 (100 %)	1 diff (99.9 %id)
DC382536	placenta	.h	50 to 687	1 to 638				638/638 (100 %)	1 diff (99.9 %id)
DC383549	Prostate	.h	50 to 610	1 to 561				561/561 (100 %)	0 diff (100 %id)
BP364037	lung	.h	50 to 631	1 to 582				582/582 (100 %)	1 diff (99.9 %id)
DC417164	trachea	.h	58 to 637	1 to 580				580/580 (100 %)	1 diff (99.9 %id)
BG252484	adenocarcinoma, cell line, Liver	.h	62 to 743	1 to 688				648/996 (65 %)	27 diff (97.3 %id)
DC358947	lung	.h	64 to 625	1 to 562				562/562 (100 %)	0 diff (100 %id)
CN314402	embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7	.h	66 to 795	1 to 731				731/735 (99 %)	2 diff (99.8 %id)
BX361117	Placenta Cot 25-normalized	.h	67 to 1101	1 to 1032				1032/1032 (100 %)	34 diff (96.8 %id)
Z20619		.h	71 to 287	1 to 217				217/219 (99 %)	7 diff (96.9 %id)
AF210730		.h	101 to 3346	1 to 3246	exact	tiling clone, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	3246/3246 (100 %)	2 diff (100.0 %id)
TI_57228572		.h	108 to 991	52 to 934				883/897 (98 %)	15 diff (98.4 %id)
BI869524	adenocarcinoma, cell line, Liver	.h	109 to 991	1 to 882				882/896 (98 %)	15 diff (98.4 %id)
DC414659	trachea	.h	165 to 752	1 to 588				588/588 (100 %)	2 diff (99.7 %id)
DC415969	trachea	.i	1 to 500	6 to 505		tiling clone,		505/505 (100 %)	0 diff (100 %id)
AL137469	testis	.i	186 to 2952	1 to 2767		tiling clone, available from DKFZ, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	2767/2767 (100 %)	0 diff (100 %id)
BY799685	eye	.i	657 to 1231	1 to 574				574/574 (100 %)	2 diff (99.7 %id)
DA243227	brain	.j	1 to 589	2 to 590		tiling clone, capped		589/589 (100 %)	2 diff (99.7 %id)
AF385931		.j	62 to 3659	1 to 3599		tiling clone, AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	3599/3599 (100 %)	3 diff (100.0 %id)
NM_001144964.1		.j	62 to 8497	1 to 8436		RefSeq,		8436/8436 (100 %)	0 diff (100 %id)
BE000802	breast_normal	.j	124 to 368	282 to 32			Submitted on the opposite strand	251/295 (85 %)	0 diff (100 %id)
BE000845	breast_normal	.j	124 to 354	232 to 2			Submitted on the opposite strand	231/245 (94 %)	0 diff (100 %id)
DA819220		.k	1 to 554	2 to 555		tiling clone, capped		554/554 (100 %)	1 diff (99.9 %id)
NM_001144970.1		.k	15 to 8360	1 to 8346		RefSeq,		8346/8346 (100 %)	0 diff (100 %id)
BP350606		.k	15 to 597	1 to 583				583/583 (100 %)	1 diff (99.9 %id)
DA220385	brain	.k	16 to 566	2 to 552		capped		551/551 (100 %)	0 diff (100 %id)
DA248109	brain	.k	16 to 598	2 to 584		capped		583/583 (100 %)	0 diff (100 %id)
DA457548	tongue, tumor tissue	.k	16 to 456	2 to 442		capped		441/441 (100 %)	0 diff (100 %id)
DA183003	amygdala	.k	18 to 566	2 to 550		capped		549/549 (100 %)	1 diff (99.9 %id)
DA328074	hippocampus	.k	22 to 518	2 to 499		capped		498/512 (97 %)	2 diff (99.7 %id)
DA216983	brain	.k	33 to 513	2 to 486		capped		485/485 (100 %)	5 diff (99.0 %id)
AK294963	brain	.k	51 to 3726	1 to 3680	K22R L166R E185G A449K V450A ...	tiling clone,		3678/3680 (99 %)	7 diff (99.9 %id)
DC323126	brain	.k	51 to 612	1 to 562				562/562 (100 %)	0 diff (100 %id)
DC342827	thalamus	.k	51 to 619	1 to 569				569/570 (99 %)	2 diff (99.7 %id)
BP218498	caudate nucleus	.k	51 to 518	1 to 468				468/580 (80 %)	6 diff (99.0 %id)
DA226067	brain	.k	52 to 566	2 to 516		capped		515/515 (100 %)	1 diff (99.9 %id)
AY243318	lung	.k	60 to 538	1 to 479				479/479 (100 %)	1 diff (99.8 %id)
AB007899	brain	.k	100 to 4977	1 to 4879		tiling clone, available from KIAA,		4879/4879 (100 %)	3 diff (100.0 %id)
DA192505	amygdala	.k	232 to 791	2 to 561		capped		560/560 (100 %)	4 diff (99.3 %id)
DA100948	cerebellum	.k	252 to 838	2 to 588		capped		587/587 (100 %)	0 diff (100 %id)
DB229842	trachea	.k	268 to 839	2 to 573		capped		572/572 (100 %)	0 diff (100 %id)
DA193303	amygdala	.k	318 to 839	2 to 523		capped		522/522 (100 %)	0 diff (100 %id)
AA489302		.l	1 to 479	1 to 478		tiling clone,		478/478 (100 %)	1 diff (99.8 %id)
CF121144	CNCAP(3)T-225 cell line, Prostate	.l	501 to 1210	8 to 717		tiling clone,		710/717 (99 %)	8 diff (98.9 %id)
TI_154180143		.l	501 to 1337	76 to 909		tiling clone,		834/835 (99 %)	11 diff (98.7 %id)
BX497814	Liver	.l	1049 to 1540	1 to 492		tiling clone,		492/492 (100 %)	8 diff (98.4 %id)
AA486281		.l	1286 to 1734	447 to 1				447/447 (100 %)	3 diff (99.4 %id)
BM930263	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.l	1296 to 1739	444 to 1		tiling clone,	Submitted on the opposite strand	444/447 (99 %)	2 diff (99.6 %id)
BM683738	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.l	1297 to 1745	1 to 449			Submitted on the opposite strand	449/452 (99 %)	6 diff (98.7 %id)
BP274300	Kidney	.m	1 to 579	1 to 581		tiling clone,		579/581 (99 %)	4 diff (99.4 %id)
AY751751	Liver	.m	478 to 1244	1 to 767		tiling clone,		767/767 (100 %)	2 diff (99.8 %id)
AV729150	hypothalamus	.n	1 to 406	10 to 415		tiling clone,		406/415 (97 %)	7 diff (98.4 %id)
CD109507	Human Placenta, placenta	.n	321 to 1034	18 to 745		tiling clone,		728/771 (94 %)	41 diff (94.7 %id)
AI637786	pooled germ cell tumors	.n	750 to 1273	524 to 1		tiling clone,		524/524 (100 %)	1 diff (99.9 %id)
BX501711	Liver	.n	849 to 1273	57 to 481		AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	425/481 (88 %)	6 diff (98.8 %id)
BF574344	muscle (skeletal)	.o	1 to 660	1 to 706		tiling clone,		706/820 (86 %)	29 diff (96.5 %id)
CR598386	T cells (Jurkat cell line) Cot10-normalized	.o	430 to 1540	1 to 1111	exact	tiling clone,		1111/1111 (100 %)	0 diff (100 %id)
BP238150	Liver	.p	1 to 610	1 to 610	R23F	tiling clone,		610/610 (100 %)	3 diff (99.6 %id)
DC321782	brain	.q	1 to 572	1 to 572	exact	tiling clone,		572/572 (100 %)	0 diff (100 %id)
BP329429	rectum	.r	1 to 582	1 to 582	exact	tiling clone,		582/582 (100 %)	0 diff (100 %id)
TI_57152993		.s	1 to 687	84 to 774				691/936 (73 %)	14 diff (98.6 %id)
BI765101	pooled colon, kidney, stomach	.s	7 to 687	1 to 685		tiling clone,		685/847 (80 %)	10 diff (98.9 %id)
BG540188	lung	.s	9 to 651	1 to 642				642/642 (100 %)	15 diff (97.7 %id)
BI762849	pooled colon, kidney, stomach	.s	19 to 633	1 to 636				636/966 (65 %)	38 diff (96.1 %id)
BI762734	pooled colon, kidney, stomach	.s	19 to 777	1 to 775	I41L I44L E49D E58A W59L ...	tiling clone,		775/784 (98 %)	36 diff (95.5 %id)
BI762938	pooled colon, kidney, stomach	.s	19 to 890	1 to 899	F80S W96L K97E L98T G99W ...	tiling clone,		899/899 (100 %)	49 diff (94.6 %id)
TI_57150397		.s	19 to 777	64 to 838	I41L I44L E49D E58A W59L ...			775/847 (91 %)	44 diff (94.9 %id)
TI_57150540		.s	19 to 890	27 to 925	F80S W96L K97E L98T G99W ...			899/925 (97 %)	34 diff (96.4 %id)
TI_57150318		.s	20 to 633	59 to 693				635/1023 (62 %)	29 diff (97.2 %id)
AI620533	Prostate	.s	339 to 736	405 to 8		tiling clone,		398/405 (98 %)	0 diff (100 %id)
AI620532	Prostate	.s	393 to 736	347 to 4				344/347 (99 %)	0 diff (100 %id)
AA662143	normal prostate, Prostate	.s	401 to 730	333 to 8		tiling clone,		326/333 (97 %)	0 diff (100 %id)
BF514087		.s	432 to 758	14 to 340		tiling clone,	Submitted on the opposite strand	327/352 (92 %)	11 diff (96.9 %id)
AW183334	pooled	.s	446 to 728	313 to 29				285/313 (91 %)	0 diff (100 %id)
AW193035	adenocarcinoma, Pancreas	.s	504 to 728	262 to 38				225/262 (85 %)	0 diff (100 %id)
BP340588	Spleen	.t	1 to 581	1 to 581	exact	tiling clone,		581/581 (100 %)	0 diff (100 %id)
AK130420	rectum	.u	1 to 2066	1 to 2066	exact	tiling clone, available from FLJ,		2066/2066 (100 %)	1 diff (100.0 %id)
BQ007027	Chondrosarcoma, Left Pelvis	.u	1333 to 2059	745 to 19	G3A E42X R44A I45Y R46P ...	AAA	Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base)	727/727 (100 %)	3 diff (99.6 %id)
DC357667		.va	1 to 553	1 to 553	exact	tiling clone,		553/553 (100 %)	0 diff (100 %id)
AK091189	tongue, tumor tissue	.vb	1 to 2742	2 to 2747	exact	tiling clone, available from FLJ,		2747/2747 (100 %)	2 diff (100.0 %id)
DA438772	tongue, tumor tissue	.vb	1 to 597	2 to 598		capped		597/597 (100 %)	0 diff (100 %id)
DB313547	tongue, tumor tissue	.vb	2208 to 2742	535 to 1				535/535 (100 %)	0 diff (100 %id)
BF673328	Prostate	.vc	1 to 139	1 to 139	exact	tiling clone,		744/900 (82 %)	43 diff (95.3 %id)
CV373443	prostate_tumor	.vd	1 to 271	154 to 428		tiling clone,		271/428 (63 %)	6 diff (98.6 %id)
BY797839	eye	.vd	39 to 651	1 to 613		tiling clone,		613/613 (100 %)	0 diff (100 %id)
CV399297	prostate_tumor	.vd	162 to 418	6 to 263				258/263 (98 %)	20 diff (92.4 %id)
AY243316	lung	.vd	476 to 769	1 to 297				297/310 (95 %)	5 diff (98.4 %id)
AY243314	lung	.vd	520 to 927	1 to 408		tiling clone,		408/408 (100 %)	1 diff (99.8 %id)
DC351044	brain	.vd	869 to 1281	71 to 484	exact	tiling clone,		414/484 (85 %)	6 diff (98.8 %id)
DA646473	mammary gland	.ve-u	1 to 772	2 to 769	C28X A50X	tiling clone, capped		768/776 (98 %)	6 diff (99.3 %id)
AK096812	Prostate	.ve-u	229 to 2744	1 to 2516	D4Y	tiling clone, available from FLJ,		2516/2516 (100 %)	2 diff (100.0 %id)
DA877808	Prostate	.ve-u	230 to 786	2 to 558	D4Y	capped		557/557 (100 %)	1 diff (99.9 %id)
DB361157	mammary gland	.ve-u	2182 to 2744	562 to 1				562/562 (100 %)	2 diff (99.7 %id)
DB330211	Prostate	.ve-u	2212 to 2744	534 to 1				534/534 (100 %)	1 diff (99.9 %id)
BG480445	choriocarcinoma, placenta	.vf-u	1 to 673	1 to 708		tiling clone,		708/708 (100 %)	32 diff (95.5 %id)
CV362614	ovary	.vf-u	700 to 997	306 to 6		tiling clone,	Submitted on the opposite strand	301/314 (95 %)	0 diff (100 %id)
BX642806		.vf-u	750 to 1178	1 to 429	exact	tiling clone,		429/429 (100 %)	0 diff (100 %id)
BG432676	Kidney	.vf-u	894 to 1648	1 to 766				766/776 (98 %)	44 diff (94.4 %id)
AW376914	colon	.vf-u	1022 to 1632	1 to 612		tiling clone,		612/612 (100 %)	5 diff (99.2 %id)
AW856882	colon	.vf-u	1036 to 1223	192 to 6				187/193 (96 %)	0 diff (100 %id)
AW604320	colon	.vf-u	1194 to 1822	649 to 23		tiling clone,		627/649 (96 %)	0 diff (100 %id)
AW752814	colon	.vf-u	1331 to 1831	513 to 13		tiling clone,		501/513 (97 %)	0 diff (100 %id)
AW752817	colon	.vf-u	1365 to 1818	454 to 1		tiling clone,		454/454 (100 %)	0 diff (100 %id)
AI904428	breast	.vf-u	1416 to 1817	418 to 15				404/419 (96 %)	0 diff (100 %id)
DA727948		.vg-u	1 to 743	2 to 744	exact	tiling clone, capped		743/744 (99 %)	1 diff (99.9 %id)
CK003868	brain/CNS, Human Brain - Cerebellar Cortex	.vg-u	12 to 671	1 to 661	exact			661/661 (100 %)	3 diff (99.6 %id)
W03535. matches multiple genes	melanocyte	.vg-u	25 to 412	1 to 385	S75P V76F R77V W78G S80C ...		also hits gene HPS3	385/385 (100 %)	3 diff (99.3 %id)
CK904399	Islets of Langerhans, Pancreas	.vg-u	35 to 612	1 to 578	exact			578/578 (100 %)	0 diff (100 %id)
BM023475	Islets of Langerhans, Pancreas	.vg-u	35 to 613	1 to 578	R37I K38*			578/578 (100 %)	4 diff (99.4 %id)
BM023376	Islets of Langerhans, Pancreas	.vg-u	51 to 619	1 to 569	R37I K38L G39W			569/569 (100 %)	4 diff (99.3 %id)
DT218192	brain	.vg-u	55 to 679	1 to 625	exact			625/625 (100 %)	1 diff (99.9 %id)
AA426629	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.vg-u	203 to 709	14 to 519				506/519 (97 %)	6 diff (98.9 %id)
BM714082	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.vg-u	288 to 708	1 to 421		fully sequenced,	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	421/421 (100 %)	0 diff (100 %id)
AL596790	human spinal cord	.vg-u	328 to 941	615 to 1			Submitted on the opposite strand	615/615 (100 %)	1 diff (99.9 %id)
BU943808	mixed (pool of 40 RNAs)	.vg-u	349 to 1119	1 to 775				775/776 (99 %)	13 diff (98.4 %id)
BF082988	colon_normal	.vg-u	355 to 453	101 to 4				98/101 (97 %)	0 diff (100 %id)
AL121228	melanoma (MeWo cell line)	.vg-u	382 to 666	112 to 396				285/396 (71 %)	6 diff (98.5 %id)
BF217451	brain, glioblastoma	.vg-u	520 to 1149	1 to 614				614/876 (70 %)	27 diff (97.0 %id)
BM716484	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.vg-u	586 to 1265	690 to 12			Submitted on the opposite strand	679/693 (97 %)	0 diff (100 %id)
BU738543	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.vg-u	587 to 1201	1 to 614			Submitted on the opposite strand	614/614 (100 %)	4 diff (99.4 %id)
BM673992	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.vg-u	587 to 1258	1 to 671		AAA	Submitted on the opposite strand	671/671 (100 %)	7 diff (99.0 %id)
BM715529	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.vg-u	597 to 1265	679 to 12		tiling clone, AAA	Submitted on the opposite strand	668/690 (96 %)	0 diff (100 %id)
BE622143	melanotic melanoma, skin	.vg-u	625 to 1255	1 to 637				637/637 (100 %)	7 diff (99.0 %id)
BQ214305	large cell carcinoma, lung	.vg-u	647 to 1200	1 to 559				559/1088 (51 %)	16 diff (98.6 %id)
FN050713	breast carcinoma	.vg-u	652 to 705	54 to 1			Submitted on the opposite strand	54/55 (98 %)	0 diff (100 %id)
BM023118	Islets of Langerhans, Pancreas	.vg-u	669 to 1248	580 to 1				580/580 (100 %)	1 diff (99.9 %id)
CK904398	Islets of Langerhans, Pancreas	.vg-u	678 to 1248	571 to 1				571/571 (100 %)	0 diff (100 %id)
BM675266	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.vg-u	678 to 1258	599 to 19		fully sequenced, AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	581/581 (100 %)	0 diff (100 %id)
AI763298	Kidney	.vg-u	687 to 1248	562 to 1				562/569 (98 %)	5 diff (99.2 %id)
AL536553	brain, fetal brain	.vg-u	688 to 1219	532 to 1				953/986 (96 %)	67 diff (93.3 %id)
AI765473	2 pooled tumors (clear cell type), Kidney	.vg-u	696 to 1250	560 to 6				555/560 (99 %)	0 diff (100 %id)
BX395199	Neuroblastoma Cot 50-normalized	.vg-u	697 to 1250	155 to 711				557/711 (78 %)	6 diff (99.2 %id)
DB326220. matches multiple genes	brain	.vg-u	715 to 1258	544 to 1			also hits gene miriri	544/544 (100 %)	1 diff (99.9 %id)
FN133573	breast carcinoma	.vg-u	733 to 838	1 to 107				107/107 (100 %)	1 diff (99.1 %id)
AW663926	pooled	.vg-u	735 to 1255	526 to 6				521/526 (99 %)	0 diff (100 %id)
AI805904	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.vg-u	761 to 1257	497 to 1				497/497 (100 %)	0 diff (100 %id)
AI418006	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.vg-u	792 to 1258	477 to 11		AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	467/467 (100 %)	0 diff (100 %id)
AI376713		.vg-u	799 to 1250	454 to 2				453/454 (99 %)	0 diff (100 %id)
BQ030227	lung, Metastatic Chondrosarcoma	.vg-u	799 to 1258	478 to 19		AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	460/460 (100 %)	0 diff (100 %id)
N26256	melanocyte	.vg-u	825 to 1248	424 to 1				424/424 (100 %)	0 diff (100 %id)
AI243456	pooled	.vg-u	825 to 1258	434 to 1				434/434 (100 %)	0 diff (100 %id)
D44900	brain	.vg-u	832 to 1247	417 to 1			Submitted on the opposite strand	417/417 (100 %)	1 diff (99.8 %id)
AA424849	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.vg-u	832 to 1244	418 to 6				413/418 (98 %)	0 diff (100 %id)
BU945204	mixed (pool of 40 RNAs)	.vg-u	836 to 1264	1 to 429		tiling clone,		429/433 (99 %)	3 diff (99.4 %id)
AI358418	poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus	.vg-u	840 to 1248	409 to 1				409/409 (100 %)	0 diff (100 %id)
N33507	melanocyte	.vg-u	845 to 1260	418 to 1				418/418 (100 %)	3 diff (99.3 %id)
BM023192	Islets of Langerhans, Pancreas	.vg-u	854 to 1248	395 to 1				395/395 (100 %)	1 diff (99.8 %id)
N67688. matches multiple genes	melanocyte	.vg-u	860 to 1260	406 to 1			also hits gene HPS3	406/406 (100 %)	5 diff (98.8 %id)
AI433991	adenocarcinoma, Pancreas	.vg-u	875 to 1260	384 to 1				384/384 (100 %)	2 diff (99.5 %id)
AA975075	Kidney	.vg-u	878 to 1261	388 to 5				384/388 (98 %)	0 diff (100 %id)
AA907398	carcinoid, lung	.vg-u	894 to 1250	359 to 3				357/359 (99 %)	0 diff (100 %id)
BU680325	lung, Primary Lung Epithelial Cells	.vg-u	961 to 1258	316 to 19		AAA	Possibly primed on the genome, locally A rich (37/37 A in genome downstream of last aligned base)	298/306 (97 %)	0 diff (100 %id)
BM713114	eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid	.vg-u	968 to 1265	309 to 12			Submitted on the opposite strand	298/309 (96 %)	0 diff (100 %id)
AI559921	mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus	.vg-u	1002 to 1248	247 to 1				247/247 (100 %)	0 diff (100 %id)
BX369797	Neuroblastoma Cot 50-normalized	.vg-u	1116 to 1250	1 to 136				136/139 (97 %)	3 diff (97.9 %id)
D11900	Liver	.vg-u	1129 to 1250	1 to 122				122/123 (99 %)	1 diff (99.2 %id)
DC336209	hippocampus	.vh	1 to 594	1 to 594		tiling clone,		594/594 (100 %)	1 diff (99.9 %id)
DC418883	trachea	.vh	36 to 628	1 to 593		tiling clone,		593/593 (100 %)	0 diff (100 %id)
DB247002		.vh	323 to 868	2 to 548	exact	tiling clone, capped		547/547 (100 %)	1 diff (99.9 %id)
BU183524	melanotic melanoma, skin	.vi	1 to 827	12 to 840	G146R D147G V148M P149S	tiling clone,		829/878 (94 %)	9 diff (99.0 %id)
BU839569	hepatocellular carcinoma, cell line, Liver	.vj	1 to 752	1 to 754	exact	tiling clone,		754/937 (80 %)	25 diff (97.4 %id)
BU189167	melanotic melanoma, skin	.vk	1 to 667	1 to 667	exact	tiling clone,		667/864 (77 %)	1 diff (99.9 %id)
BG994392	head_neck	.vl-u	1 to 561	16 to 576	exact	tiling clone,		561/576 (97 %)	6 diff (99.0 %id)
BG996301	head_neck	.vl-u	11 to 451	1 to 439	exact			439/439 (100 %)	4 diff (99.1 %id)
DC299844		.vm	1 to 555	1 to 555	exact	tiling clone,		555/555 (100 %)	0 diff (100 %id)
AY243313	lung	.vn	1 to 172	1 to 173		tiling clone,		173/185 (93 %)	4 diff (97.9 %id)
AY256662	lung	.vn	113 to 551	1 to 439	exact	tiling clone,		439/439 (100 %)	1 diff (99.8 %id)
CN314399	embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7	.vo	1 to 488	1 to 488	F49L	tiling clone,		488/490 (99 %)	5 diff (99.0 %id)
BF882998	lung_tumor	.vp-u	-8 to 485	1 to 494	H4R G17N Q20*	tiling clone,		494/494 (100 %)	23 diff (95.4 %id)
AY243321	lung	.vq	1 to 381	1 to 381	L49F	tiling clone,		381/381 (100 %)	8 diff (98.0 %id)
AW948750	prostate_tumor	.vr-u	1 to 370	7 to 375	I2L R4T G5S M8*			369/375 (98 %)	6 diff (98.4 %id)
AW948748	prostate_tumor	.vr-u	4 to 365	17 to 378		tiling clone,		362/378 (95 %)	6 diff (98.5 %id)
AW948753	prostate_tumor	.vr-u	4 to 346	8 to 351		tiling clone,		344/351 (98 %)	6 diff (98.3 %id)
AW025620	Kidney	.vs	1 to 314	314 to 1	exact	tiling clone,		314/314 (100 %)	0 diff (100 %id)
FN097947	breast carcinoma	.vt-u	1 to 103	1 to 99		tiling clone,		99/101 (98 %)	5 diff (95.1 %id)
AI972462	Prostate	.vt-u	78 to 284	226 to 19		tiling clone, AAA	Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base)	208/208 (100 %)	3 diff (98.6 %id)
AV709004	adrenal gland	Gene NEDD4L, variant not shown					Suspected internal deletion, this clone was ignored
DA052588		Gene NEDD4L, variant not shown				capped	Suspected internal deletion, this clone was ignored
EC476277	Prostate	Gene NEDD4L, variant not shown
H05550	whole brain	Gene NEDD4L, variant not shown					Suspected internal deletion, this clone was ignored
AW015258		Gene NEDD4L, variant not shown				AAA	Suspected internal deletion, this clone was ignored
BF436834	Prostate	Gene NEDD4L, variant not shown					Suspected internal deletion, this clone was ignored
BM545141	ovary (pool of 3)	Gene NEDD4L, variant not shown					Suspected internal deletion, this clone was ignored
CD652895	Embryonic Stem cells	Gene NEDD4L, variant not shown					This clone was ignored
DB374846	placenta	Gene NEDD4L, variant not shown					This clone was ignored
AU136332	placenta	Gene NEDD4L, variant not shown				capped	This clone was ignored
DA869743	Prostate	Gene NEDD4L, variant not shown				capped	This clone was ignored
DB329847	Prostate	Gene NEDD4L, variant not shown					This clone was ignored
DC383304	Prostate	Gene NEDD4L, variant not shown					Suspected internal deletion, this clone was ignored
DC426511	Prostate	Gene NEDD4L, variant not shown					Suspected internal deletion, this clone was ignored
TI_154103538		Gene NEDD4L, variant not shown				AAA	Suspected internal deletion, this clone was ignored
CK725192	Chondrosarcoma, Left Pubic Bone	Gene NEDD4L, variant not shown				AAA	Suspected internal deletion, this clone was ignored