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Gene NCOA3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
436 supporting clones for gene NCOA3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_181659.2   .a 1 to 7993 4 to 7996 exact RefSeq,   7996/7996
(100 %)
1 diff
(100.0 %id)
AK289683 amygdala .a 54 to 4559 1 to 4506 M892V S937P tiling clone,   4506/4506
(100 %)
5 diff
(99.9 %id)
AF016031   .a 68 to 4735 1 to 4668 exact tiling clone,   4668/4668
(100 %)
2 diff
(100.0 %id)
BE889466 leiomyosarcoma, uterus .a 3389 to 4012 1 to 628       628/927
(67 %)
12 diff
(98.8 %id)
DA476823   .a 3478 to 4055 2 to 579   capped   578/578
(100 %)
3 diff
(99.5 %id)
AK296810 tongue, tumor tissue .a 3590 to 4584 1 to 995       995/995
(100 %)
1 diff
(99.9 %id)
DC346426 tongue, tumor tissue .a 3590 to 4162 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
BF883699 lung_tumor .a 3678 to 3983 319 to 15     Submitted on the opposite strand 305/319
(95 %)
1 diff
(99.7 %id)
G64267   .a 3747 to 4282 1 to 536       536/536
(100 %)
0 diff
(100 %id)
NM_001174087.1   .b 1 to 7990 4 to 7993 exact RefSeq,   7993/7993
(100 %)
1 diff
(100.0 %id)
BC092516 Lymph, normal germinal center B cells .b 43 to 4828 1 to 4783 Q1275T T1276Q Q1277A A1278F F1279S ... tiling clone, AAA   4783/4783
(100 %)
4 diff
(100.0 %id)
AB209863 aorta endothelial cell .b 61 to 5316 1 to 5256 exact tiling clone,   5256/5256
(100 %)
1 diff
(100.0 %id)
BP241416 Liver .b 677 to 1246 1 to 570       570/570
(100 %)
5 diff
(99.2 %id)
BP352566   .b 724 to 1303 1 to 581       581/588
(98 %)
4 diff
(99.4 %id)
AK302588 testis .b 936 to 1952 1 to 1016       1016/1016
(100 %)
1 diff
(100.0 %id)
DC401250 testis .b 936 to 1488 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BP310003 brain .b 1041 to 1622 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA460913 tongue, tumor tissue .b 1214 to 1773 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA852472 placenta .b 1214 to 1760 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
AL603256 human skeletal muscle .b 1215 to 1822 1 to 608       608/608
(100 %)
1 diff
(99.9 %id)
BG433852 Kidney .b 2419 to 3128 1 to 711       711/806
(88 %)
19 diff
(97.7 %id)
BP352542   .b 2461 to 3047 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DA808237 brain .b 2525 to 3113 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA808298 brain .b 2525 to 3082 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BE735827 adenocarcinoma, Pancreas .b 2591 to 3339 1 to 757       755/1061
(71 %)
21 diff
(98.1 %id)
DA459147 tongue, tumor tissue .b 2613 to 3192 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
CB141685 Liver .b 2651 to 3156 1 to 506       506/506
(100 %)
1 diff
(99.9 %id)
DB060966 testis .b 2652 to 3169 2 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
BP237479 Liver .b 2657 to 3280 1 to 624       624/624
(100 %)
2 diff
(99.7 %id)
BP237530 Liver .b 2657 to 3280 1 to 624       624/624
(100 %)
1 diff
(99.9 %id)
BP352922   .b 2669 to 3249 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BG398036 B-cells, primary B-cells from tonsils (cell line) .b 2670 to 3435 1 to 763       763/923
(82 %)
15 diff
(98.4 %id)
BQ309184 breast .b 2757 to 3140 383 to 1       383/383
(100 %)
9 diff
(97.7 %id)
BP240106 Liver .b 2783 to 3335 1 to 553       553/553
(100 %)
2 diff
(99.7 %id)
BE733896 choriocarcinoma, placenta .b 2809 to 3499 1 to 700       700/947
(73 %)
24 diff
(97.5 %id)
BE408460 choriocarcinoma, placenta .b 2810 to 3465 1 to 663       663/701
(94 %)
19 diff
(97.3 %id)
BE733748 choriocarcinoma, placenta .b 2810 to 3579 1 to 762       764/906
(84 %)
16 diff
(98.3 %id)
BE902710 choriocarcinoma, placenta .b 2810 to 3640 1 to 828       828/949
(87 %)
20 diff
(97.9 %id)
BM464911 lymph, lymphoma, cell line .b 2817 to 3511 1 to 698       698/1157
(60 %)
5 diff
(99.6 %id)
CN355157 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 2881 to 3553 13 to 685       673/685
(98 %)
6 diff
(99.2 %id)
BP352690   .b 2885 to 3470 1 to 586       586/586
(100 %)
3 diff
(99.5 %id)
AL704798 human skeletal muscle .b 2924 to 3524 1 to 601       601/601
(100 %)
3 diff
(99.6 %id)
BM788403 stomach .b 2942 to 3612 1 to 671       671/671
(100 %)
1 diff
(99.9 %id)
AW889697 nervous_tumor .b 2967 to 3174 15 to 221       207/224
(92 %)
8 diff
(96.5 %id)
AA065272   .b 3661 to 4065 1 to 404     Submitted on the opposite strand 404/405
(99 %)
7 diff
(98.3 %id)
AW503332 lymph .b 3746 to 4298 18 to 567       550/567
(97 %)
9 diff
(98.5 %id)
TI_154159223   .b 3746 to 4414 98 to 761       664/676
(98 %)
19 diff
(97.2 %id)
AW390410 stomach .b 3764 to 4249 483 to 1       483/483
(100 %)
6 diff
(98.8 %id)
AW262809 brain, three pooled meningiomas .b 3790 to 4005 429 to 214       216/429
(50 %)
0 diff
(100 %id)
BM845526 lymph node, stomach .b 3814 to 4220 1 to 393       393/393
(100 %)
3 diff
(99.3 %id)
NM_006534.3   .c 1 to 7981 4 to 7984 exact RefSeq,   7984/7984
(100 %)
1 diff
(100.0 %id)
AF012108   .c 59 to 6871 1 to 6812 exact tiling clone, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 6812/6812
(100 %)
2 diff
(100.0 %id)
BC119001 PCR rescued clones .c 110 to 7546 1 to 7433 exact tiling clone,   7433/7433
(100 %)
4 diff
(100.0 %id)
AF010227   .c 174 to 4677 1 to 4495 D131E G132A Q1270T Q1272A T1273F ...     4495/4495
(100 %)
12 diff
(99.8 %id)
BC122547 PCR rescued clones .d 1 to 7433 1 to 7433 exact tiling clone,   7433/7433
(100 %)
3 diff
(100.0 %id)
BM450392 eye, retinoblastoma .d 3516 to 4298 1 to 786       786/952
(82 %)
13 diff
(98.7 %id)
AA300819 testis .d 3714 to 4018 1 to 305       305/305
(100 %)
1 diff
(99.7 %id)
BM263790 Pancreas, Purified pancreatic islet .d 3726 to 4284 1 to 559       559/559
(100 %)
4 diff
(99.3 %id)
CK824636 Pancreas, Purified pancreatic islet .d 3741 to 4304 1 to 564     Submitted on the opposite strand 564/564
(100 %)
0 diff
(100 %id)
NM_001174088.1   .e 1 to 7966 4 to 7969 exact RefSeq,   7969/7969
(100 %)
1 diff
(100.0 %id)
DB091786 testis .e 1 to 553 4 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA248756 brain .e 1 to 596 2 to 597   tiling clone, capped   596/596
(100 %)
1 diff
(99.9 %id)
BP310850 brain .e 24 to 605 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BP310851 brain .e 24 to 603 1 to 582       582/582
(100 %)
13 diff
(97.8 %id)
BP351331   .e 24 to 604 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
DB071966 testis .e 29 to 572 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BU429493 lymph .e 43 to 524 8 to 489       482/489
(98 %)
6 diff
(98.8 %id)
TI_154150566   .e 43 to 544 80 to 581       502/502
(100 %)
1 diff
(99.9 %id)
DB060916 testis .e 50 to 579 2 to 532   capped   531/531
(100 %)
3 diff
(99.5 %id)
BU588121 mixed (pool of 40 RNAs) .e 51 to 467 1 to 417       417/421
(99 %)
6 diff
(98.6 %id)
BP312096 brain .e 52 to 631 1 to 582       582/582
(100 %)
6 diff
(99.0 %id)
DA375387 thalamus .e 53 to 597 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
AK308346 thymus .e 54 to 1046 1 to 992       992/992
(100 %)
4 diff
(99.6 %id)
BP280749   .e 54 to 635 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP282535 bone marrow .e 54 to 636 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BP353869   .e 54 to 634 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DA189529 amygdala .e 55 to 640 2 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
DB067714 testis .e 55 to 626 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DB070018 testis .e 55 to 583 2 to 531   capped   530/530
(100 %)
2 diff
(99.7 %id)
DB134417 thymus .e 55 to 608 2 to 557   capped   556/556
(100 %)
3 diff
(99.5 %id)
CD657296 Embryonic Stem cells .e 65 to 896 11 to 839       829/843
(98 %)
18 diff
(97.9 %id)
BU428465 lymph .e 72 to 419 1 to 348       348/348
(100 %)
8 diff
(97.8 %id)
AF036892   .e 82 to 6831 7 to 6748 G470R Q1265T Q1267A T1268F Q1269S ... tiling clone,   6742/6754
(99 %)
17 diff
(99.8 %id)
DR005834 Prostate .e 83 to 748 1 to 665       665/665
(100 %)
6 diff
(99.1 %id)
BP315317 mammary gland .e 123 to 706 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
AL698932 human skeletal muscle .e 227 to 835 1 to 609       609/609
(100 %)
0 diff
(100 %id)
DA328439 hippocampus .e 238 to 720 83 to 566   capped   484/565
(85 %)
7 diff
(98.8 %id)
BM146766 leukopheresis .e 291 to 827 1 to 537       537/537
(100 %)
4 diff
(99.3 %id)
BX643165   .e 406 to 627 9 to 230       222/230
(96 %)
6 diff
(97.4 %id)
BQ940591 leiomyosarcoma, uterus .e 543 to 1091 1 to 556       556/1335
(41 %)
13 diff
(99.1 %id)
BE081143 breast .e 575 to 748 176 to 1     Submitted on the opposite strand 176/177
(99 %)
5 diff
(97.2 %id)
AW869102 stomach_normal .e 618 to 899 288 to 7       282/288
(97 %)
5 diff
(98.3 %id)
AL732145 breast .e 627 to 793 1 to 167       167/206
(81 %)
4 diff
(98.1 %id)
DA322074 hippocampus .e 1254 to 1915 2 to 664   capped   663/663
(100 %)
4 diff
(99.4 %id)
BG959700 colon .e 1262 to 1504 1 to 250       250/250
(100 %)
16 diff
(93.6 %id)
AW505045 lymph .e 1366 to 1613 1 to 248       248/248
(100 %)
5 diff
(98.0 %id)
BP250284 hippocampus .e 1368 to 1948 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA800022 brain .e 1371 to 1923 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA800052 brain .e 1371 to 1921 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BU430424 lymph .e 1446 to 1895 1 to 450       450/450
(100 %)
5 diff
(98.9 %id)
BP314712 mammary gland .e 1447 to 2027 1 to 581       581/581
(100 %)
0 diff
(100 %id)
TI_154151830   .e 1453 to 2130 80 to 754       675/675
(100 %)
24 diff
(96.5 %id)
BF880701 lung_tumor .e 1462 to 1689 243 to 15     Submitted on the opposite strand 229/243
(94 %)
0 diff
(100 %id)
BF833755 head_neck .e 1503 to 1649 1 to 146       146/146
(100 %)
4 diff
(97.3 %id)
BQ320145 colon .e 1505 to 2117 611 to 1       611/611
(100 %)
8 diff
(98.7 %id)
BP286748 lung .e 1515 to 2095 1 to 581       581/582
(99 %)
7 diff
(98.8 %id)
AL709631 human skeletal muscle .e 1534 to 1860 1 to 327       327/327
(100 %)
0 diff
(100 %id)
AW502754 lymph .e 1570 to 1810 1 to 241       241/241
(100 %)
8 diff
(96.7 %id)
AW502755 lymph .e 1576 to 1918 7 to 349       343/349
(98 %)
6 diff
(98.3 %id)
CF143515 lymph .e 1576 to 1927 7 to 358       352/358
(98 %)
9 diff
(97.5 %id)
TI_154158435   .e 1576 to 2111 81 to 616       536/536
(100 %)
23 diff
(95.8 %id)
TI_154158437   .e 1576 to 2104 82 to 610       529/535
(98 %)
14 diff
(97.4 %id)
TI_154174964   .e 1576 to 2087 79 to 591       513/683
(75 %)
33 diff
(95.2 %id)
BQ308439 breast .e 1588 to 2212 22 to 646       625/656
(95 %)
12 diff
(98.2 %id)
BQ307339 breast .e 1601 to 2213 612 to 6   tiling clone,   607/612
(99 %)
4 diff
(99.4 %id)
BP315558 mammary gland .e 1607 to 2184 1 to 577       577/582
(99 %)
2 diff
(99.7 %id)
BP314355 mammary gland .e 1737 to 2318 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CF137941 lymph .e 1808 to 2277 8 to 477       470/477
(98 %)
6 diff
(98.8 %id)
TI_154167618   .e 1808 to 2296 80 to 568       489/490
(99 %)
2 diff
(99.6 %id)
BF588628 breast, lobullar carcinoma in situ .e 1831 to 2107 1 to 277     Submitted on the opposite strand 277/285
(97 %)
2 diff
(99.3 %id)
BI043523 ovary .e 1888 to 2419 539 to 2       538/542
(99 %)
0 diff
(100 %id)
DA862661 placenta .e 1910 to 2476 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
AL707326 human skeletal muscle .e 1973 to 2552 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BQ307658 breast .e 2092 to 2722 29 to 657       629/657
(95 %)
9 diff
(98.7 %id)
BQ307789 breast .e 2100 to 2724 13 to 636       624/637
(97 %)
10 diff
(98.5 %id)
AW503706 lymph .e 2150 to 2597 1 to 448       448/448
(100 %)
5 diff
(98.9 %id)
TI_154159700   .e 2157 to 2753 80 to 669       590/631
(93 %)
14 diff
(97.8 %id)
BP249838 hippocampus .e 2174 to 2776 1 to 603       603/603
(100 %)
0 diff
(100 %id)
BF837578 head_neck .e 2434 to 2909 1 to 477       477/477
(100 %)
5 diff
(99.0 %id)
BQ367415 placenta_normal .e 2499 to 2920 437 to 16       422/447
(94 %)
16 diff
(96.5 %id)
BI050079 placenta_normal .e 2554 to 2800 247 to 1       247/248
(99 %)
10 diff
(96.0 %id)
BX475216   .e 2655 to 2975 1 to 323       323/323
(100 %)
2 diff
(99.4 %id)
BI053359 placenta_normal .e 3027 to 3252 1 to 227       227/228
(99 %)
6 diff
(97.4 %id)
BI053528 placenta_normal .e 3027 to 3525 1 to 498       498/498
(100 %)
4 diff
(99.2 %id)
BQ308206 breast .e 3187 to 3341 156 to 1       156/156
(100 %)
5 diff
(96.8 %id)
AW503271 lymph .e 3197 to 3648 19 to 470       452/475
(95 %)
7 diff
(98.6 %id)
TI_154159131   .e 3197 to 3685 94 to 582       489/582
(84 %)
7 diff
(98.8 %id)
AA065270   .e 3202 to 3603 1 to 401     Submitted on the opposite strand 401/405
(99 %)
5 diff
(98.8 %id)
AA488485   .e 3204 to 3751 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
BQ424449 leiomyosarcoma, uterus .e 3205 to 3966 1 to 768       768/889
(86 %)
17 diff
(98.1 %id)
CN355156 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 3209 to 3747 1 to 539       539/539
(100 %)
0 diff
(100 %id)
BQ309202 breast .e 3216 to 3456 264 to 24       241/271
(88 %)
3 diff
(98.9 %id)
BQ307771 breast .e 3218 to 3341 1 to 123       123/123
(100 %)
4 diff
(96.8 %id)
BQ307655 breast .e 3219 to 3341 1 to 120       120/120
(100 %)
5 diff
(95.9 %id)
BQ307773 breast .e 3219 to 3341 122 to 1       122/127
(96 %)
1 diff
(99.3 %id)
BI026642 marrow .e 3252 to 3341 90 to 1       90/108
(83 %)
0 diff
(100 %id)
BQ643858 hepatocellular carcinoma, cell line, Liver .e 3330 to 4183 1 to 865       865/873
(99 %)
16 diff
(98.2 %id)
BQ653563 hepatocellular carcinoma, cell line, Liver .e 3330 to 4240 1 to 910       910/910
(100 %)
10 diff
(99.0 %id)
BI026288 marrow .e 3360 to 3673 327 to 12       316/327
(96 %)
2 diff
(99.4 %id)
BI026641 marrow .e 3360 to 3697 357 to 19       339/357
(94 %)
0 diff
(100 %id)
BQ307668 breast .e 3360 to 3806 1 to 448       448/448
(100 %)
4 diff
(99.2 %id)
BQ307772 breast .e 3360 to 3745 401 to 15       387/401
(96 %)
1 diff
(99.8 %id)
BQ307788 breast .e 3360 to 3772 1 to 416       416/421
(98 %)
5 diff
(98.9 %id)
BQ308201 breast .e 3360 to 3753 399 to 5       395/399
(98 %)
9 diff
(97.8 %id)
AA150333.
matches multiple genes
uterus .e 3398 to 3790 1 to 395     also hits gene LRFN5 395/427
(92 %)
5 diff
(98.9 %id)
AW500998 lymph .e 3398 to 3675 1 to 278       278/279
(99 %)
15 diff
(94.7 %id)
AW500949 lymph .e 3398 to 3828 1 to 431       431/431
(100 %)
4 diff
(99.1 %id)
AW500950 lymph .e 3398 to 3735 1 to 338       338/338
(100 %)
22 diff
(93.5 %id)
CF121655 lymph .e 3398 to 4095 1 to 696       696/696
(100 %)
10 diff
(98.6 %id)
TI_154155403   .e 3405 to 3882 81 to 558       478/480
(99 %)
5 diff
(99.0 %id)
TI_154180855   .e 3405 to 4178 69 to 834       766/804
(95 %)
13 diff
(98.4 %id)
CF144067 lymph .e 3413 to 3789 10 to 386       377/392
(96 %)
22 diff
(94.4 %id)
BQ009202 Chondrosarcoma, Left Pubic Bone .e 3555 to 3979 698 to 277   AAA   422/680
(62 %)
0 diff
(100 %id)
AW502847 lymph .e 3723 to 4163 8 to 445       438/445
(98 %)
11 diff
(97.6 %id)
TI_154158542   .e 3723 to 4342 80 to 693       614/615
(99 %)
19 diff
(97.0 %id)
AU138524 placenta .e 3823 to 4580 2 to 760   capped   759/759
(100 %)
9 diff
(98.9 %id)
BF772699 epid_tumor .e 3942 to 4339 15 to 412       398/412
(96 %)
6 diff
(98.6 %id)
CN278411 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 3949 to 4198 1 to 250   tiling clone,   250/250
(100 %)
4 diff
(98.4 %id)
AA065271   .e 3964 to 4352 1 to 392     Submitted on the opposite strand 392/405
(96 %)
16 diff
(96.1 %id)
AA360136 lung .e 4009 to 4178 1 to 170       170/176
(96 %)
2 diff
(98.9 %id)
AW959705   .e 4010 to 4652 1 to 636       636/636
(100 %)
17 diff
(97.4 %id)
BF928020 nervous_tumor .e 4056 to 4342 1 to 295       295/295
(100 %)
24 diff
(91.9 %id)
AA114092   .e 4056 to 4483 1 to 425       425/425
(100 %)
5 diff
(98.9 %id)
BF903273 marrow .e 4059 to 4467 1 to 407       407/407
(100 %)
13 diff
(96.9 %id)
DA719390   .e 4084 to 4654 2 to 572   capped   571/573
(99 %)
2 diff
(99.7 %id)
CT004489 T-Lymphocytes .e 4099 to 4950 1 to 852       852/852
(100 %)
0 diff
(100 %id)
BF149319 skin .e 4109 to 4539 435 to 5       431/435
(99 %)
0 diff
(100 %id)
BI036978 nervous_tumor .e 4115 to 4498 405 to 14       392/405
(96 %)
12 diff
(97.1 %id)
AA045419 uterus .e 4158 to 4443 1 to 287       287/287
(100 %)
5 diff
(98.3 %id)
T77368 liver and spleen .e 4159 to 4488 1 to 333   fully sequenced,   333/333
(100 %)
3 diff
(99.1 %id)
W84822 liver and spleen .e 4159 to 4525 1 to 367   fully sequenced,   367/367
(100 %)
3 diff
(99.2 %id)
AI936766 anaplastic oligodendroglioma, brain .e 4174 to 4808 639 to 5       635/749
(84 %)
9 diff
(98.8 %id)
BG106752 lymph, lymphoma, cell line .e 4174 to 4889 4 to 724       721/1115
(64 %)
23 diff
(98.0 %id)
CR984727 T-Lymphocytes .e 4174 to 4639 41 to 510       470/513
(91 %)
12 diff
(97.7 %id)
BF110654 carcinoid, lung .e 4179 to 4350 1 to 172     Submitted on the opposite strand 172/172
(100 %)
10 diff
(94.2 %id)
BU431019 lymph .e 4192 to 4731 8 to 547       540/547
(98 %)
7 diff
(98.8 %id)
TI_154152808   .e 4192 to 4875 80 to 763       684/684
(100 %)
21 diff
(97.0 %id)
CA425060 cell lines, Chondrosarcoma .e 4193 to 4823 649 to 19   AAA   631/631
(100 %)
2 diff
(99.7 %id)
BQ694192 adipose .e 4204 to 4823 628 to 10     Submitted on the opposite strand 619/628
(98 %)
2 diff
(99.7 %id)
TI_154137037   .e 4205 to 4804 686 to 85   AAA   602/904
(66 %)
22 diff
(97.6 %id)
BU428526 lymph .e 4239 to 4860 1 to 622       622/622
(100 %)
5 diff
(99.2 %id)
TI_154149348   .e 4246 to 5047 80 to 886       807/810
(99 %)
23 diff
(97.2 %id)
BF900797 marrow .e 4263 to 4718 473 to 19     Submitted on the opposite strand 455/473
(96 %)
1 diff
(99.8 %id)
AW317012 adenocarcinoma, Pancreas .e 4278 to 4819 542 to 1       542/598
(90 %)
10 diff
(98.4 %id)
BQ024745 placenta .e 4303 to 4823 540 to 19   AAA   522/523
(99 %)
6 diff
(98.9 %id)
R21765 placenta .e 4309 to 4542 1 to 239   fully sequenced,   239/239
(100 %)
5 diff
(98.0 %id)
R28559 placenta .e 4310 to 4498 1 to 189       189/323
(58 %)
3 diff
(99.1 %id)
AA065268   .e 4313 to 4708 396 to 1       396/405
(97 %)
2 diff
(99.6 %id)
AI440499 B-cell, chronic lymphotic leukemia .e 4366 to 4823 460 to 3       458/460
(99 %)
0 diff
(100 %id)
BF902339 marrow .e 4403 to 4720 327 to 11     Submitted on the opposite strand 317/327
(96 %)
2 diff
(99.4 %id)
CN355158 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 4413 to 5066 1 to 654       654/654
(100 %)
1 diff
(99.9 %id)
AA065269   .e 4420 to 4823 405 to 1       405/405
(100 %)
4 diff
(99.1 %id)
BM708966 eye, RPE and Choroid .e 4426 to 4823 1 to 398   AAA   398/398
(100 %)
1 diff
(99.8 %id)
BF931900 nervous_tumor .e 4437 to 4687 254 to 2     Submitted on the opposite strand 253/254
(99 %)
0 diff
(100 %id)
BF992383 placenta_normal .e 4452 to 5036 598 to 11       588/605
(97 %)
3 diff
(99.6 %id)
T77062 liver and spleen .e 4458 to 4823 380 to 9   fully sequenced,   372/380
(97 %)
6 diff
(98.5 %id)
W84775 liver and spleen .e 4464 to 4823 361 to 1   fully sequenced,   361/361
(100 %)
1 diff
(99.8 %id)
AL705222 human skeletal muscle .e 4473 to 5026 1 to 555       555/559
(99 %)
6 diff
(99.0 %id)
BG528785 adenocarcinoma, Prostate .e 4480 to 5233 1 to 766       766/898
(85 %)
24 diff
(97.4 %id)
R67499 placenta .e 4495 to 4803 313 to 1       313/392
(79 %)
5 diff
(98.8 %id)
R21718 placenta .e 4512 to 4826 324 to 5   fully sequenced,   320/324
(98 %)
10 diff
(97.0 %id)
R28355 placenta .e 4517 to 4823 316 to 7       310/454
(68 %)
0 diff
(100 %id)
AW449795   .e 4523 to 4823 318 to 18   AAA   301/301
(100 %)
0 diff
(100 %id)
BQ361264 ovary .e 4538 to 4699 160 to 4       157/160
(98 %)
0 diff
(100 %id)
FN123862 breast carcinoma .e 4581 to 4685 1 to 105       105/105
(100 %)
1 diff
(99.1 %id)
AW500103 lymph .e 4598 to 5093 1 to 496       496/496
(100 %)
5 diff
(99.0 %id)
CV570500 cornea, eye .e 4601 to 5201 1 to 601       601/601
(100 %)
0 diff
(100 %id)
TI_154154197   .e 4605 to 5235 80 to 703       624/632
(98 %)
15 diff
(97.7 %id)
ES311609 frontal balding hair, skin .e 4611 to 4770 1 to 159       159/159
(100 %)
3 diff
(98.2 %id)
CA311503 Human Lung Epithelial cells, lung .e 4691 to 5412 739 to 19   AAA   721/721
(100 %)
2 diff
(99.8 %id)
AU135602 placenta .e 4722 to 5487 2 to 782   capped   781/783
(99 %)
27 diff
(96.6 %id)
BU163982 embryonal carcinoma, cell line, testis .e 4724 to 5621 1 to 906       906/906
(100 %)
26 diff
(97.2 %id)
BP872507 embryonal kidney .e 4752 to 5333 582 to 1     Submitted on the opposite strand 582/582
(100 %)
1 diff
(99.9 %id)
DA491019 brain .e 4776 to 5340 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BU568632 testis .e 4788 to 5441 1 to 665       665/862
(77 %)
16 diff
(98.2 %id)
BU852343 testis .e 4788 to 5527 1 to 745       745/817
(91 %)
11 diff
(98.7 %id)
BQ344164 nervous_tumor .e 4815 to 5013 1 to 193       193/202
(95 %)
6 diff
(97.1 %id)
DA960563 Spleen .e 4860 to 5430 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
CF136951 lymph .e 4873 to 5231 1 to 359       359/359
(100 %)
20 diff
(94.5 %id)
TI_154166242   .e 4880 to 5369 81 to 574       494/1100
(44 %)
33 diff
(97.0 %id)
DB378341 placenta .e 4902 to 5417 515 to 1       515/580
(88 %)
12 diff
(98.0 %id)
FN158684 breast carcinoma .e 4910 to 5013 1 to 105       105/105
(100 %)
2 diff
(98.1 %id)
C05232 heart .e 4914 to 5266 1 to 353       353/353
(100 %)
0 diff
(100 %id)
AL599202   .e 4935 to 5373 1 to 439       439/439
(100 %)
0 diff
(100 %id)
AA488354   .e 4954 to 5434 482 to 2       481/482
(99 %)
0 diff
(100 %id)
AU136948 placenta .e 4960 to 5625 2 to 681   capped   680/690
(98 %)
21 diff
(97.0 %id)
DN916168   .e 5093 to 5667 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
AA346493 heart .e 5129 to 5333 1 to 205       205/205
(100 %)
0 diff
(100 %id)
AW965232   .e 5130 to 5734 1 to 606       606/606
(100 %)
16 diff
(97.4 %id)
BE546344 cervical carcinoma cell line, cervix .e 5130 to 5897 1 to 773       773/800
(96 %)
49 diff
(93.9 %id)
TI_159723405   .e 5165 to 5846 684 to 3       682/1012
(67 %)
0 diff
(100 %id)
BF445476 Prostate .e 5197 to 5601 1 to 405     Submitted on the opposite strand 405/405
(100 %)
1 diff
(99.8 %id)
CX165752 human embryonic stem cells differentiated toan early endodermal cell type .e 5333 to 5977 1 to 647   tiling clone,   647/647
(100 %)
5 diff
(99.3 %id)
AA156793 uterus .e 5350 to 5787 1 to 435     Submitted on the opposite strand 435/435
(100 %)
5 diff
(98.9 %id)
AI146974 uterus .e 5350 to 5805 1 to 456     Submitted on the opposite strand 456/456
(100 %)
0 diff
(100 %id)
BE147795 head_neck .e 5356 to 5627 291 to 19     Submitted on the opposite strand 273/296
(92 %)
0 diff
(100 %id)
AI438999 B-cell, chronic lymphotic leukemia .e 5384 to 5849 477 to 12   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 466/466
(100 %)
0 diff
(100 %id)
AA922415 squamous cell carcinoma from base of tongue, tongue .e 5422 to 5852 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AU127850   .e 5438 to 5977 2 to 541   capped   540/543
(99 %)
4 diff
(99.3 %id)
AA809279 germinal center B cell .e 5475 to 5874 1 to 398     Submitted on the opposite strand 398/401
(99 %)
5 diff
(98.8 %id)
CB410063 maxilla, pooled .e 5488 to 5998 513 to 1     Submitted on the opposite strand 513/513
(100 %)
6 diff
(98.9 %id)
CV569979 cornea, eye .e 5504 to 6118 1 to 615       615/615
(100 %)
1 diff
(99.9 %id)
H51992 liver and spleen .e 5506 to 5822 1 to 322       322/353
(91 %)
7 diff
(98.1 %id)
AA665470   .e 5527 to 5765 239 to 1       239/239
(100 %)
0 diff
(100 %id)
AA767048 germinal center B cell .e 5531 to 5842 310 to 1       310/310
(100 %)
2 diff
(99.4 %id)
AA678419   .e 5534 to 5868 335 to 1       335/335
(100 %)
0 diff
(100 %id)
AW337430 lymph node, lymphoma, follicular mixed small and largecell .e 5552 to 5875 324 to 1       324/324
(100 %)
0 diff
(100 %id)
CD705699 normal nasopharynx .e 5553 to 5745 42 to 235       194/235
(82 %)
6 diff
(97.5 %id)
AA883388 pooled .e 5560 to 5839 278 to 1       278/278
(100 %)
1 diff
(99.7 %id)
AA678029 liver and spleen .e 5576 to 5849 272 to 1       272/272
(100 %)
1 diff
(99.7 %id)
W20355 lung .e 5606 to 5774 14 to 182       169/187
(90 %)
2 diff
(99.0 %id)
W46488 senescent fibroblast .e 5637 to 6047 1 to 418       418/418
(100 %)
3 diff
(99.3 %id)
AA811653 germinal center B cell .e 5658 to 6136 18 to 496     Submitted on the opposite strand 479/496
(96 %)
6 diff
(98.8 %id)
AA045313 uterus .e 5665 to 5849 185 to 1       185/190
(97 %)
3 diff
(98.5 %id)
BM193760 leukopheresis .e 5677 to 6054 377 to 1       377/403
(93 %)
5 diff
(98.8 %id)
BQ222560 leiomyosarcoma, uterus .e 5732 to 6585 12 to 870       859/1014
(84 %)
9 diff
(99.2 %id)
AI377118   .e 5763 to 6113 406 to 55   AAA   352/377
(93 %)
0 diff
(100 %id)
CB146006 Liver .e 5765 to 6233 11 to 478       468/478
(97 %)
6 diff
(98.8 %id)
BU942355 mixed (pool of 40 RNAs) .e 5814 to 6536 1 to 729       729/816
(89 %)
12 diff
(98.6 %id)
BE001795 breast_normal .e 5817 to 6169 21 to 374       354/379
(93 %)
4 diff
(99.0 %id)
BU171827 melanotic melanoma, skin .e 5842 to 6296 1 to 458       458/1060
(43 %)
12 diff
(98.9 %id)
AA384019 thyroid gland .e 5853 to 6170 1 to 323       323/323
(100 %)
6 diff
(98.2 %id)
AW954083   .e 5860 to 6486 1 to 630       630/632
(99 %)
24 diff
(96.3 %id)
CR746396 leiomyosarcoma, uterus .e 5895 to 6381 12 to 498       487/498
(97 %)
7 diff
(98.6 %id)
BQ437320 leiomyosarcoma, uterus .e 5896 to 6696 1 to 812   tiling clone,   812/816
(99 %)
16 diff
(98.1 %id)
AA305762 colon .e 5906 to 6256 1 to 354       354/354
(100 %)
3 diff
(99.2 %id)
BG435396 placenta .e 5923 to 6610 1 to 691       691/699
(98 %)
7 diff
(99.0 %id)
CB986168 Pooled-Glandular .e 5928 to 6578 1 to 665       665/803
(82 %)
25 diff
(96.9 %id)
BF672557 muscle (skeletal) .e 5935 to 6678 1 to 732       732/887
(82 %)
50 diff
(94.4 %id)
AA494062 liposarcoma .e 5939 to 6421 30 to 513       484/513
(94 %)
6 diff
(98.9 %id)
AA230072   .e 6027 to 6134 1 to 108       108/108
(100 %)
3 diff
(97.3 %id)
CB991156 placenta, pre-eclamptic placenta .e 6051 to 6694 20 to 663       644/674
(95 %)
6 diff
(99.2 %id)
AA346492 heart .e 6100 to 6458 359 to 1       359/361
(99 %)
2 diff
(99.5 %id)
AU135331 placenta .e 6103 to 6851 2 to 761   capped   760/768
(98 %)
15 diff
(98.1 %id)
BY996182   .e 6133 to 6759 10 to 636       627/636
(98 %)
6 diff
(99.1 %id)
FN107706 breast carcinoma .e 6190 to 6236 56 to 11     Submitted on the opposite strand 46/56
(82 %)
0 diff
(100 %id)
AU156165 placenta .e 6278 to 6844 564 to 1       564/564
(100 %)
10 diff
(98.3 %id)
AA156882 uterus .e 6291 to 6872 574 to 3     Submitted on the opposite strand 572/620
(92 %)
0 diff
(100 %id)
CK824637 Pancreas, Purified pancreatic islet .e 6293 to 6872 580 to 1     Submitted on the opposite strand 580/580
(100 %)
0 diff
(100 %id)
BM263477 Pancreas, Purified pancreatic islet .e 6295 to 6863 569 to 1       569/569
(100 %)
3 diff
(99.5 %id)
BF107056 placenta .e 6297 to 6869 1 to 566       566/824
(68 %)
16 diff
(98.1 %id)
AI809327 pooled .e 6319 to 6872 556 to 3       554/556
(99 %)
0 diff
(100 %id)
AI697692 carcinoid, lung .e 6322 to 6859 538 to 1       538/538
(100 %)
0 diff
(100 %id)
AI808698 pooled .e 6322 to 6862 541 to 1       541/541
(100 %)
3 diff
(99.5 %id)
AW390744 stomach .e 6343 to 6738 1 to 394       394/400
(98 %)
7 diff
(98.3 %id)
BI524017 pooled lung and spleen .e 6347 to 7131 1 to 790       790/790
(100 %)
28 diff
(96.5 %id)
TI_44159832   .e 6347 to 7131 38 to 827       790/827
(95 %)
6 diff
(99.3 %id)
AW378612 head_neck .e 6361 to 6738 1 to 378       378/384
(98 %)
3 diff
(99.3 %id)
AA729022 germinal center B-cells, tonsil .e 6364 to 6489 126 to 1       126/126
(100 %)
0 diff
(100 %id)
AW390745 stomach .e 6390 to 6738 1 to 348       348/352
(98 %)
6 diff
(98.3 %id)
AI927894 Kidney .e 6397 to 6844 458 to 11   AAA   448/448
(100 %)
0 diff
(100 %id)
DB375841 placenta .e 6405 to 6862 461 to 1       461/512
(90 %)
7 diff
(98.7 %id)
W46433 senescent fibroblast .e 6417 to 6862 454 to 1       454/456
(99 %)
5 diff
(99.0 %id)
AA738120 pooled germ cell tumors .e 6428 to 6841 414 to 1       414/414
(100 %)
2 diff
(99.6 %id)
AW083451 colon, moderately differentiated adenocarcinoma .e 6429 to 6850 423 to 1       423/423
(100 %)
1 diff
(99.8 %id)
BF593535 Kidney .e 6429 to 6844 426 to 11   AAA   416/416
(100 %)
5 diff
(98.8 %id)
AI571054 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .e 6441 to 6876 436 to 1   tiling clone,   436/436
(100 %)
0 diff
(100 %id)
AI471698 colon, moderately-differentiated adenocarcinoma .e 6443 to 6844 414 to 13   AAA   402/402
(100 %)
0 diff
(100 %id)
H52110 liver and spleen .e 6454 to 6838 398 to 1       398/414
(96 %)
14 diff
(96.7 %id)
AW015672   .e 6468 to 6862 406 to 12   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 395/395
(100 %)
4 diff
(99.0 %id)
AA905298 pooled .e 6470 to 6856 387 to 1       387/387
(100 %)
0 diff
(100 %id)
BQ362486 stomach .e 6493 to 6662 178 to 8       171/178
(96 %)
0 diff
(100 %id)
AA229716   .e 6508 to 6854 347 to 1       347/347
(100 %)
2 diff
(99.5 %id)
AA824532 germinal center B cell .e 6552 to 6865 314 to 1       314/314
(100 %)
1 diff
(99.7 %id)
BQ225626 large cell carcinoma, lung .e 6554 to 7423 12 to 883       872/883
(98 %)
7 diff
(99.3 %id)
BU566429 mixed (pool of 40 RNAs) .e 6574 to 6870 1 to 299       299/336
(88 %)
6 diff
(98.3 %id)
BE168160 head_neck .e 6579 to 7005 426 to 1     Submitted on the opposite strand 426/426
(100 %)
5 diff
(98.9 %id)
AI270423 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 6595 to 6860 266 to 1       266/266
(100 %)
0 diff
(100 %id)
DN916167   .e 6601 to 6752 153 to 1       153/153
(100 %)
2 diff
(98.7 %id)
BF791262 muscle (skeletal) .e 6626 to 7251 1 to 617       617/889
(69 %)
25 diff
(97.2 %id)
N92736 lung .e 6656 to 6855 204 to 1       204/204
(100 %)
5 diff
(97.6 %id)
AA828040 ovary .e 6657 to 6875 227 to 9       219/234
(93 %)
0 diff
(100 %id)
BG176600 lymph, lymphoma, cell line .e 6692 to 7255 1 to 566       566/968
(58 %)
22 diff
(97.8 %id)
BM692321 eye, human retina .e 6785 to 7408 9 to 634   tiling clone,   626/634
(98 %)
6 diff
(99.1 %id)
CD241926 Blood vessels - aorta, basilar and artery .e 6852 to 7342 1 to 498       498/849
(58 %)
28 diff
(96.8 %id)
AA300587 testis .e 6897 to 7220 1 to 324       324/324
(100 %)
1 diff
(99.7 %id)
BQ232932 large cell carcinoma, lung .e 6948 to 7894 1 to 966   AAA   966/1042
(92 %)
34 diff
(96.8 %id)
BX094220 placenta .e 7007 to 7713 1 to 709       709/709
(100 %)
2 diff
(99.8 %id)
BG286980 bladder, transitional cell papilloma, cell line .e 7030 to 7719 14 to 719       706/795
(88 %)
56 diff
(93.0 %id)
BF218331 brain, glioblastoma .e 7039 to 7618 1 to 589       589/865
(68 %)
61 diff
(93.0 %id)
R62184 placenta .e 7052 to 7265 1 to 214       214/214
(100 %)
0 diff
(100 %id)
R82563 placenta .e 7106 to 7472 1 to 373       373/399
(93 %)
7 diff
(98.3 %id)
CA450268 Human Lung Epithelial cells, lung .e 7159 to 7957 814 to 19   AAA   796/796
(100 %)
5 diff
(99.4 %id)
TI_149305492   .e 7167 to 7957 878 to 94   tiling clone, AAA   785/934
(84 %)
10 diff
(99.0 %id)
BM749313 Ascites, stomach .e 7172 to 7657 1 to 486       486/486
(100 %)
1 diff
(99.8 %id)
BM747245 Ascites, stomach .e 7172 to 7800 1 to 629       629/629
(100 %)
2 diff
(99.7 %id)
BM756630 Ascites, stomach .e 7172 to 7671 1 to 500       500/500
(100 %)
0 diff
(100 %id)
BM758198 Ascites, stomach .e 7172 to 7690 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
BM772538 Ascites, stomach .e 7172 to 7828 1 to 657       657/657
(100 %)
0 diff
(100 %id)
BM837011 Ascites, stomach .e 7180 to 7644 1 to 469       469/469
(100 %)
3 diff
(99.4 %id)
H02363 placenta .e 7187 to 7504 1 to 323       323/326
(99 %)
7 diff
(97.9 %id)
TI_149275039   .e 7212 to 7951 879 to 147   AAA   733/924
(79 %)
0 diff
(100 %id)
BU685837 lung, Primary Lung Epithelial Cells .e 7225 to 7957 751 to 19   AAA   733/733
(100 %)
0 diff
(100 %id)
AA173495   .e 7229 to 7509 1 to 281       281/281
(100 %)
1 diff
(99.7 %id)
W77872 heart .e 7230 to 7643 1 to 414       414/414
(100 %)
3 diff
(99.3 %id)
AA173520   .e 7230 to 7568 1 to 340       340/340
(100 %)
2 diff
(99.5 %id)
TI_157613252   .e 7230 to 7957 818 to 85   AAA   734/735
(99 %)
27 diff
(96.4 %id)
AA988130 carcinoid, lung .e 7231 to 7706 1 to 476     Submitted on the opposite strand 476/476
(100 %)
1 diff
(99.8 %id)
W17077 lung .e 7232 to 7575 1 to 344   fully sequenced,   344/344
(100 %)
0 diff
(100 %id)
AA625939 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 7232 to 7530 1 to 299     Submitted on the opposite strand 299/299
(100 %)
3 diff
(99.0 %id)
N21983 cochlea, ear .e 7233 to 7676 1 to 448     Submitted on the opposite strand 448/448
(100 %)
4 diff
(99.2 %id)
AI032197 carcinoid, lung .e 7233 to 7600 1 to 368     Submitted on the opposite strand 368/368
(100 %)
3 diff
(99.2 %id)
TI_159703123   .e 7270 to 7916 651 to 2       650/933
(69 %)
0 diff
(100 %id)
AA328359   .e 7278 to 7621 7 to 353       347/353
(98 %)
8 diff
(97.8 %id)
AW960481   .e 7278 to 7924 10 to 660       651/660
(98 %)
13 diff
(98.1 %id)
BG499295 adenocarcinoma, Prostate .e 7285 to 7859 1 to 574   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 574/574
(100 %)
2 diff
(99.7 %id)
BQ008205 Chondrosarcoma, Left Pubic Bone .e 7297 to 7957 679 to 19   AAA   661/661
(100 %)
0 diff
(100 %id)
BM717548 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 7307 to 7908 1 to 602       602/602
(100 %)
0 diff
(100 %id)
BG611865 adenocarcinoma, Prostate .e 7338 to 7842 1 to 507       507/527
(96 %)
7 diff
(98.7 %id)
AA651784 germinal center B cell .e 7357 to 7693 337 to 1       337/337
(100 %)
0 diff
(100 %id)
AI761748 pooled .e 7370 to 7961 597 to 6       592/597
(99 %)
0 diff
(100 %id)
R66167 placenta .e 7372 to 7686 1 to 317   fully sequenced,   317/317
(100 %)
5 diff
(98.5 %id)
CD641952 pooled .e 7382 to 7957 1 to 576   AAA   576/576
(100 %)
5 diff
(99.2 %id)
R32906 placenta .e 7384 to 7682 1 to 304   fully sequenced,   304/304
(100 %)
3 diff
(99.1 %id)
BQ006496 Chondrosarcoma, Left Pelvis .e 7384 to 7957 588 to 19   AAA   570/570
(100 %)
4 diff
(99.3 %id)
DB364897   .e 7415 to 7957 536 to 1       536/540
(99 %)
18 diff
(96.7 %id)
BQ023529 placenta .e 7423 to 7965 560 to 18   AAA   543/544
(99 %)
6 diff
(98.9 %id)
TI_151743361   .e 7425 to 7965 657 to 109   AAA   549/1113
(49 %)
22 diff
(98.1 %id)
BU940488 mixed (pool of 40 RNAs) .e 7432 to 7957 1 to 526   AAA   526/526
(100 %)
4 diff
(99.3 %id)
AI739670 colon, colon tumor, RER+ .e 7438 to 7818 382 to 1       382/382
(100 %)
7 diff
(98.2 %id)
AW084629 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .e 7451 to 7957 508 to 1       508/508
(100 %)
4 diff
(99.3 %id)
AA975377 2 pooled tumors (clear cell type), Kidney .e 7472 to 7961 490 to 1       490/490
(100 %)
0 diff
(100 %id)
AJ713117 bone marrow .e 7479 to 7869 1 to 393       393/393
(100 %)
6 diff
(98.5 %id)
AI860165 Kidney .e 7484 to 7957 498 to 25   AAA   474/474
(100 %)
6 diff
(98.8 %id)
AI760436 colon, colon tumor, RER+ .e 7498 to 7957 481 to 22   AAA   460/460
(100 %)
5 diff
(99.0 %id)
AI433009 lymph node, lymphoma, follicular mixed small and largecell .e 7510 to 7959 450 to 1       450/450
(100 %)
0 diff
(100 %id)
AI709217 aorta .e 7512 to 7965 455 to 1       455/455
(100 %)
1 diff
(99.8 %id)
AW043961 pooled .e 7516 to 7961 447 to 2       446/447
(99 %)
0 diff
(100 %id)
D51083   .e 7517 to 7957 437 to 1       437/437
(100 %)
5 diff
(98.9 %id)
BE465184 Kidney .e 7519 to 7960 447 to 4       444/447
(99 %)
0 diff
(100 %id)
AI921560 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 7522 to 7957 436 to 1       436/436
(100 %)
0 diff
(100 %id)
AA804198 germinal center B cell .e 7528 to 7892 367 to 1       367/367
(100 %)
1 diff
(99.8 %id)
AI925061 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 7529 to 7958 431 to 1       431/431
(100 %)
1 diff
(99.8 %id)
AI302669 2 pooled tumors (clear cell type), Kidney .e 7530 to 7961 433 to 2       432/433
(99 %)
0 diff
(100 %id)
AW237349 Kidney .e 7531 to 7957 429 to 1       429/429
(100 %)
3 diff
(99.4 %id)
AI468456 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 7533 to 7957 425 to 1       425/425
(100 %)
1 diff
(99.8 %id)
Z25162 leg muscle, skeletal muscle .e 7538 to 7871 1 to 335       335/336
(99 %)
4 diff
(98.9 %id)
N90850 lung .e 7545 to 7966 415 to 1   fully sequenced,   415/415
(100 %)
8 diff
(98.1 %id)
AA713695 germinal center B cell .e 7555 to 7957 419 to 15   AAA   405/405
(100 %)
1 diff
(99.8 %id)
AA830096 germinal center B cell .e 7556 to 7965 430 to 21   tiling clone, AAA   410/410
(100 %)
0 diff
(100 %id)
AI458839 colon, moderately-differentiated adenocarcinoma .e 7558 to 7957 436 to 37   AAA   400/400
(100 %)
2 diff
(99.5 %id)
AW589329 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 7564 to 7957 409 to 16   AAA   394/394
(100 %)
0 diff
(100 %id)
AI220501   .e 7572 to 7960 389 to 1       389/389
(100 %)
0 diff
(100 %id)
R82507 placenta .e 7573 to 7957 403 to 1       403/413
(97 %)
18 diff
(95.7 %id)
AA828355 germinal center B cell .e 7575 to 7957 420 to 36   AAA   385/385
(100 %)
1 diff
(99.8 %id)
AI761219 2 pooled tumors (clear cell type), Kidney .e 7576 to 7961 390 to 3       388/390
(99 %)
0 diff
(100 %id)
AI817332 normal prostate, Prostate .e 7587 to 7957 371 to 1       371/371
(100 %)
0 diff
(100 %id)
R67594 placenta .e 7595 to 7948 362 to 1       362/364
(99 %)
12 diff
(96.8 %id)
AA173446   .e 7598 to 7957 372 to 11   AAA   362/362
(100 %)
1 diff
(99.8 %id)
R66714.
matches multiple genes
placenta .e 7627 to 7952 338 to 8     also hits gene NEURL4andGPS2 331/340
(97 %)
0 diff
(100 %id)
H02265 placenta .e 7648 to 7941 295 to 1       295/295
(100 %)
3 diff
(99.0 %id)
W72628 heart .e 7648 to 7965 320 to 1       320/373
(85 %)
3 diff
(99.2 %id)
R32809 placenta .e 7652 to 7964 327 to 1   fully sequenced,   327/327
(100 %)
22 diff
(93.3 %id)
R67049 placenta .e 7656 to 7942 287 to 1   fully sequenced,   287/287
(100 %)
2 diff
(99.4 %id)
AI565219 pooled .e 7689 to 7957 269 to 1       269/269
(100 %)
0 diff
(100 %id)
D51094   .e 7696 to 7957 262 to 1       262/262
(100 %)
12 diff
(95.5 %id)
BF340640 brain, glioblastoma with EGFR amplification .e 7698 to 7957 1 to 264   AAA   264/264
(100 %)
9 diff
(96.6 %id)
D57675   .e 7700 to 7950 1 to 252       252/257
(98 %)
7 diff
(97.3 %id)
AU155977 placenta .e 7710 to 7957 248 to 1       248/250
(99 %)
0 diff
(100 %id)
BM477753 leiomyosarcoma, uterus .e 7724 to 7957 1 to 234   AAA   234/234
(100 %)
0 diff
(100 %id)
CV571348 cornea, eye .e 7729 to 7957 1 to 229   AAA   229/229
(100 %)
0 diff
(100 %id)
BU677059 lung, Primary Lung Epithelial Cells .e 7753 to 7957 223 to 19   AAA   205/205
(100 %)
0 diff
(100 %id)
BM907421 large cell carcinoma, lung .e 7772 to 7957 1 to 186   AAA   186/186
(100 %)
0 diff
(100 %id)
AI581492 aorta .e 7785 to 7957 184 to 12   AAA   173/173
(100 %)
0 diff
(100 %id)
AW080461 esophagus, squamous cell carcinoma .e 7870 to 7965 111 to 16   AAA   96/96
(100 %)
0 diff
(100 %id)
GD151231   .e 7873 to 7957 1 to 85   AAA   85/85
(100 %)
4 diff
(95.3 %id)
AK302595 testis .f 1 to 3942 1 to 3939 Q1100T T1101Q Q1102A A1103F F1104S ... tiling clone,   3939/3939
(100 %)
3 diff
(100.0 %id)
DC401280 testis .f 1 to 545 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
BE540872 cervix .g 1 to 769 1 to 760 F2I F93L A94P L95C S96L ... tiling clone,   762/764
(99 %)
16 diff
(98.0 %id)
BC036778 Blood, adult leukocytes .h-u 1 to 2529 1 to 2531 P114L tiling clone, available from MGC, AAA   2531/2531
(100 %)
5 diff
(99.9 %id)
BM922686 leukocyte .h-u 1 to 884 26 to 916 P114L available from MGC,   891/1049
(84 %)
35 diff
(96.7 %id)
DB133725 thymus .i 1 to 548 2 to 549 exact tiling clone, capped   548/548
(100 %)
1 diff
(99.9 %id)
CB410062 maxilla, pooled .i 164 to 775 28 to 639 exact tiling clone, Submitted on the opposite strand 612/639
(95 %)
6 diff
(99.1 %id)
BI911453 leukocyte .j 1 to 561 32 to 598 A15S P16T L17I T18D L19I ... tiling clone,   567/598
(94 %)
6 diff
(99.0 %id)
TI_57232299   .j 1 to 561 32 to 598 A15S P16T L17I T18D L19I ...     567/598
(94 %)
6 diff
(99.0 %id)
BG186464   .j 241 to 493 46 to 297       252/297
(84 %)
6 diff
(98.0 %id)
BG197764   .j 241 to 493 9 to 261       253/261
(96 %)
6 diff
(97.8 %id)
BG216623   .j 241 to 493 9 to 261       253/261
(96 %)
7 diff
(97.4 %id)
BG199837   .j 243 to 493 251 to 1   tiling clone, Submitted on the opposite strand 251/254
(98 %)
0 diff
(100 %id)
BG218157   .j 243 to 493 14 to 264       251/264
(95 %)
6 diff
(97.8 %id)
BG219703   .j 243 to 494 12 to 262       251/267
(94 %)
18 diff
(93.3 %id)
BG200739   .j 244 to 493 15 to 264       250/264
(94 %)
6 diff
(97.8 %id)
BG216624   .j 244 to 493 12 to 262       251/262
(95 %)
6 diff
(97.8 %id)
BG195218   .j 246 to 493 247 to 1     Submitted on the opposite strand 247/253
(97 %)
1 diff
(99.7 %id)
BG207112   .j 246 to 493 51 to 297       247/297
(83 %)
6 diff
(98.0 %id)
BG186962   .j 247 to 494 7 to 254       248/256
(96 %)
10 diff
(96.1 %id)
AI911111 pooled .k-u 1 to 601 600 to 1   tiling clone,   600/600
(100 %)
3 diff
(99.5 %id)
BP260829 small intestine .k-u 248 to 823 1 to 576 L53P G73R tiling clone,   576/576
(100 %)
4 diff
(99.4 %id)
BQ367235 placenta_normal .l-u 1 to 399 405 to 11 H55I L56F Q57R G58D Q59N ... tiling clone,   395/405
(97 %)
14 diff
(96.6 %id)
BG005103 placenta_normal .l-u 14 to 370 362 to 6   tiling clone,   357/362
(98 %)
0 diff
(100 %id)
AW877451 pnet .m-u 1 to 365 24 to 389 W4*     366/389
(94 %)
6 diff
(98.5 %id)
AW877500 pnet .m-u 1 to 371 381 to 12 exact     370/406
(91 %)
0 diff
(100 %id)
AW877507 pnet .m-u 1 to 372 373 to 2 Y6L R7Q R8A E9* tiling clone,   372/398
(93 %)
0 diff
(100 %id)
AW877512 pnet .m-u 1 to 371 374 to 7 exact tiling clone,   368/399
(92 %)
0 diff
(100 %id)
BQ333438 pnet .m-u 1 to 375 18 to 393 K2M R8A E9*     376/395
(95 %)
23 diff
(94.2 %id)
AW877498 pnet .m-u 22 to 350 1 to 328   tiling clone,   328/328
(100 %)
3 diff
(99.1 %id)
AW995512 breast_normal Gene NCOA3, variant not shown         This clone was ignored    
BE929537 placenta_normal Gene NCOA3, variant not shown         This clone was ignored    
BG186963   Gene NCOA3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BQ307784 breast Gene NCOA3, variant not shown         Suspected internal deletion, this clone was ignored    
BQ320116 colon Gene NCOA3, variant not shown         This clone was ignored    
AL600243   Gene NCOA3, variant not shown         Suspected internal deletion, this clone was ignored    
AV659963 corresponding non cancerous liver tissue Gene NCOA3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AI763412 B-cell, chronic lymphotic leukemia Gene NCOA3, variant not shown         Suspected internal deletion, this clone was ignored    
BP270139 small intestine Gene NCOA3, variant not shown         Suspected internal deletion, this clone was ignored    
BP351909   Gene NCOA3, variant not shown         Suspected internal deletion, this clone was ignored    
U80737 brain Gene NCOA3, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k-u, .l-u, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI