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Gene NCOA2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
307 supporting clones for gene NCOA2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AL712418 human skeletal muscle .a 1 to 506 1 to 506   tiling clone,   506/506
(100 %)
0 diff
(100 %id)
BP201018 amygdala .a 14 to 596 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DA803958 brain .a 14 to 553 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA338276 hippocampus .a 15 to 602 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA806940 brain .a 21 to 579 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BP200835 amygdala .a 33 to 614 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA671820   .a 34 to 625 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
AK308426 trachea .a 36 to 3306 1 to 3271       3271/3271
(100 %)
9 diff
(99.8 %id)
DB149877 thymus .a 36 to 579 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BP200591 amygdala .a 38 to 614 5 to 582       578/582
(99 %)
7 diff
(98.8 %id)
BP358567 mammary gland .a 38 to 615 5 to 582       578/583
(99 %)
7 diff
(98.8 %id)
BP278507   .a 39 to 615 3 to 579       577/583
(98 %)
8 diff
(98.7 %id)
DA316239 hippocampus .a 44 to 596 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
NM_006540.2   .a 56 to 6212 1 to 6157 exact RefSeq,   6157/6157
(100 %)
0 diff
(100 %id)
X97674 placenta .a 56 to 6212 1 to 6156 exact tiling clone,   6156/6156
(100 %)
7 diff
(99.9 %id)
DB456604 testis .a 71 to 554 1 to 484       484/484
(100 %)
0 diff
(100 %id)
BC114383 PCR rescued clones .a 134 to 4716 1 to 4583 M1282I     4583/4583
(100 %)
1 diff
(100.0 %id)
BC092442 Spinal cord .a 140 to 1280 55 to 1195   AAA   1142/1295
(88 %)
7 diff
(99.5 %id)
CK002637 brain/CNS, Bulk tissue from Human Spinal cord .a 140 to 682 58 to 600       544/600
(90 %)
8 diff
(98.7 %id)
DB236419 trachea .a 197 to 579 163 to 545   capped   383/544
(70 %)
7 diff
(98.8 %id)
BU941685 mixed (pool of 40 RNAs) .a 354 to 947 1 to 597       597/806
(74 %)
8 diff
(99.1 %id)
C03652 heart .a 586 to 763 1 to 181       181/181
(100 %)
10 diff
(94.5 %id)
C03704 heart .a 587 to 972 1 to 387       387/387
(100 %)
3 diff
(99.3 %id)
BE170360 head_neck .a 1089 to 1628 18 to 555       538/555
(96 %)
9 diff
(98.4 %id)
BE170504 head_neck .a 1089 to 1589 549 to 46     Submitted on the opposite strand 504/564
(89 %)
0 diff
(100 %id)
BP232231 muscle .a 1225 to 1807 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA810312 brain .a 1229 to 1786 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BF918379 nervous_tumor .a 1291 to 1626 1 to 339       339/339
(100 %)
12 diff
(96.5 %id)
BF873081 lung_tumor .a 1632 to 1945 317 to 4     Submitted on the opposite strand 314/334
(94 %)
0 diff
(100 %id)
AL707041 human skeletal muscle .a 1676 to 2171 1 to 496       496/496
(100 %)
1 diff
(99.8 %id)
DW435629 Liver .a 1797 to 2035 17 to 255       239/255
(93 %)
6 diff
(97.7 %id)
BU159029 embryonal carcinoma, cell line, testis .a 1817 to 2584 1 to 766       766/766
(100 %)
2 diff
(99.8 %id)
BG990265 head_neck .a 1844 to 2424 4 to 590       587/592
(99 %)
39 diff
(93.5 %id)
BG987973 head_neck .a 1860 to 2423 1 to 566       566/566
(100 %)
33 diff
(94.2 %id)
BP222938   .a 2009 to 2592 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BE831621 marrow .a 2138 to 2257 124 to 6       119/126
(94 %)
0 diff
(100 %id)
AW298513   .a 2177 to 2660 1 to 484     Submitted on the opposite strand 484/484
(100 %)
3 diff
(99.4 %id)
AA740705 germinal center B cell .a 2202 to 2725 1 to 524     Submitted on the opposite strand 524/524
(100 %)
2 diff
(99.7 %id)
AA744255 germinal center B cell .a 2284 to 2750 1 to 467     Submitted on the opposite strand 467/467
(100 %)
3 diff
(99.4 %id)
BP361599 thalamus .a 2503 to 3085 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BE844038 testis_normal .a 2590 to 2892 314 to 15       300/314
(95 %)
2 diff
(99.4 %id)
EF374064   .a 2822 to 3223 75 to 476       403/476
(84 %)
6 diff
(98.8 %id)
BP348469 brain .a 3010 to 3591 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA447571 tongue, tumor tissue .a 3261 to 3843 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DB084032 testis .a 3301 to 3846 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BM459228 lymph, lymphoma, cell line .a 3549 to 4476 1 to 939       939/1003
(93 %)
19 diff
(98.2 %id)
CB266001 adipose .a 3860 to 4479 1 to 620       620/620
(100 %)
1 diff
(99.9 %id)
DA099971 cerebellum .a 3904 to 4454 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA671604   .a 3904 to 4488 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
CN355154 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4237 to 4983 14 to 759       746/759
(98 %)
7 diff
(99.1 %id)
BG008410 placenta_normal .a 4242 to 4615 17 to 390       374/390
(95 %)
7 diff
(98.3 %id)
CR999481 T-Lymphocytes .a 4301 to 5147 1 to 847       847/847
(100 %)
0 diff
(100 %id)
BF350089 head_neck .a 4311 to 4675 365 to 1       365/399
(91 %)
2 diff
(99.5 %id)
BM451917 eye, retinoblastoma .a 4353 to 5208 1 to 863       863/918
(94 %)
25 diff
(97.3 %id)
T85561 liver and spleen .a 4505 to 4794 11 to 316     Submitted on the opposite strand 317/316
(100 %)
62 diff
(80.4 %id)
R77864 placenta .a 4516 to 4934 17 to 445       429/445
(96 %)
20 diff
(95.6 %id)
BQ716785 sympathetic trunk .a 4517 to 5458 1 to 951       951/952
(99 %)
31 diff
(96.8 %id)
T77249 liver and spleen .a 4617 to 5119 1 to 518       518/518
(100 %)
22 diff
(95.8 %id)
CR745451 liver and spleen .a 4618 to 5396 1 to 777       777/777
(100 %)
6 diff
(99.3 %id)
AI114474 Liver .a 4640 to 5341 1 to 710       710/742
(95 %)
18 diff
(97.6 %id)
AA092754   .a 4690 to 4987 1 to 293       293/311
(94 %)
14 diff
(95.5 %id)
TI_157601089   .a 4747 to 5589 910 to 84   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 827/960
(86 %)
18 diff
(98.2 %id)
AW854255 colon .a 4801 to 5417 1 to 618       618/618
(100 %)
19 diff
(97.0 %id)
AW504723 lymph .a 4816 to 5281 1 to 466   tiling clone,   466/466
(100 %)
6 diff
(98.8 %id)
TI_154160991   .a 4823 to 5556 72 to 795       724/734
(98 %)
33 diff
(95.6 %id)
DA042066 bladder .a 4919 to 5488 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA107103 cerebellum .a 4932 to 5484 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB145851 thymus .a 4941 to 5483 2 to 544   capped   543/552
(98 %)
3 diff
(99.5 %id)
BP295569   .a 4942 to 5521 1 to 579       579/579
(100 %)
4 diff
(99.4 %id)
AI811101 ovary, tumor, 5 pooled (see description) .a 4946 to 5076 131 to 1       131/135
(97 %)
0 diff
(100 %id)
AA994479 pooled .a 4967 to 5366 401 to 2       400/401
(99 %)
0 diff
(100 %id)
FN137463 breast carcinoma .a 4999 to 5111 1 to 112       112/112
(100 %)
3 diff
(97.4 %id)
BI462410 testis .a 5035 to 5887 1 to 860       860/891
(96 %)
33 diff
(96.3 %id)
CF138858 lymph .a 5071 to 5487 8 to 424       417/424
(98 %)
6 diff
(98.6 %id)
TI_154168997   .a 5071 to 5596 78 to 606       529/529
(100 %)
16 diff
(97.0 %id)
DA233077 brain .a 5074 to 5652 2 to 581   capped   580/580
(100 %)
3 diff
(99.5 %id)
DA416673 thalamus .a 5075 to 5612 2 to 538   capped   537/537
(100 %)
3 diff
(99.5 %id)
DB151968 thymus .a 5077 to 5678 2 to 603   capped   602/603
(99 %)
1 diff
(99.9 %id)
DA226110 brain .a 5082 to 5394 2 to 314   capped   313/313
(100 %)
0 diff
(100 %id)
DA531833 brain .a 5082 to 5701 2 to 622   capped   621/621
(100 %)
1 diff
(99.9 %id)
DA248519 brain .a 5086 to 5628 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB089721 testis .a 5089 to 5646 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
TI_157606389   .a 5091 to 5589 606 to 114   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 493/510
(96 %)
45 diff
(91.2 %id)
DA247754 brain .a 5100 to 5690 2 to 594   capped   593/593
(100 %)
3 diff
(99.5 %id)
DA225624 brain .a 5101 to 5657 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
AW027474 pooled germ cell tumors .a 5141 to 5589 448 to 1       448/448
(100 %)
4 diff
(99.2 %id)
AI654689 pooled germ cell tumors .a 5151 to 5589 440 to 1       440/440
(100 %)
3 diff
(99.4 %id)
AI127080 heart .a 5153 to 5587 435 to 1       435/435
(100 %)
1 diff
(99.8 %id)
AU185018 skin .a 5176 to 5559 384 to 1       384/384
(100 %)
1 diff
(99.8 %id)
AI393449 pooled .a 5177 to 5589 413 to 1       413/413
(100 %)
0 diff
(100 %id)
DA196328 amygdala .a 5178 to 5740 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
AI698694 pooled .a 5181 to 5589 410 to 1       410/410
(100 %)
1 diff
(99.8 %id)
AW242622 Kidney .a 5226 to 5589 364 to 1       364/364
(100 %)
1 diff
(99.8 %id)
DA121689 cerebellum .a 5229 to 5783 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA474332   .a 5248 to 5797 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
T77464 liver and spleen .a 5248 to 5589 345 to 1       345/345
(100 %)
3 diff
(99.2 %id)
AA972014 pooled .a 5265 to 5589 325 to 1       325/325
(100 %)
0 diff
(100 %id)
R77770 placenta .a 5271 to 5589 320 to 1       320/320
(100 %)
5 diff
(98.5 %id)
CN355155 embryonic stem cells, cell lines H1, H7, andH9 .a 5294 to 5749 134 to 589       456/589
(77 %)
6 diff
(99.0 %id)
R08880 liver and spleen .a 5307 to 5576 270 to 1       270/270
(100 %)
0 diff
(100 %id)
AA885068 pooled .a 5311 to 5496 186 to 1       186/187
(99 %)
0 diff
(100 %id)
CN355153 embryonic stem cells, cell lines H1, H7, andH9 .a 5349 to 5788 1 to 440       440/440
(100 %)
0 diff
(100 %id)
CK141607 embryonic stem cell, Embryonic stem cells pooled from H7 ES cellline, passage 22 .a 5387 to 6175 22 to 805       784/806
(97 %)
13 diff
(98.4 %id)
AW294916   .a 5431 to 5589 176 to 18   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 159/160
(99 %)
5 diff
(96.9 %id)
FN171163 breast carcinoma .a 5508 to 5585 78 to 4     Submitted on the opposite strand 75/78
(96 %)
0 diff
(100 %id)
DB133821 thymus .a 5536 to 6084 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA311052 hippocampus .a 5589 to 6160 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
AA947176 pooled .a 5635 to 5973 341 to 3       339/341
(99 %)
0 diff
(100 %id)
DA938295 Spleen .a 5678 to 6271 2 to 596   capped   595/595
(100 %)
3 diff
(99.5 %id)
DA443601 tongue, tumor tissue .a 5682 to 6247 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA691975   .a 5710 to 6280 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA307489 hippocampus .a 5739 to 6333 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA531955 brain .a 5740 to 6335 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
BM664556 eye, human retina .a 5812 to 6479 673 to 7       667/673
(99 %)
0 diff
(100 %id)
AA382415 testis .a 5815 to 6110 1 to 296       296/296
(100 %)
1 diff
(99.7 %id)
AA382384 testis .a 5816 to 6080 1 to 265       265/265
(100 %)
0 diff
(100 %id)
AA382440 testis .a 5816 to 6142 1 to 327       327/327
(100 %)
0 diff
(100 %id)
AA382443 testis .a 5816 to 6118 1 to 303       303/303
(100 %)
0 diff
(100 %id)
AA382503 testis .a 5816 to 6100 1 to 286       286/287
(99 %)
2 diff
(99.4 %id)
DA789783 brain .a 5883 to 6461 2 to 580   capped   579/581
(99 %)
2 diff
(99.7 %id)
DA150390 amygdala .a 5902 to 6423 2 to 522   capped   521/521
(100 %)
2 diff
(99.7 %id)
DA521310 brain .a 5902 to 6460 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA882780   .a 5978 to 6522 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA782642 brain .a 5997 to 6585 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA959777 Spleen .a 6021 to 6594 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
CB151315 cervix, Uterine .a 6063 to 6652 1 to 590       590/590
(100 %)
0 diff
(100 %id)
BG388902 embryonal carcinoma, cell line, testis .a 6123 to 6779 1 to 649       649/847
(76 %)
29 diff
(96.6 %id)
DA812727 ovary, tumor tissue .a 6130 to 6969 8 to 845   capped   838/844
(99 %)
7 diff
(99.2 %id)
DA307306 hippocampus .a 6144 to 6613 2 to 472   capped   471/471
(100 %)
1 diff
(99.8 %id)
DA632402 Kidney .a 6156 to 6708 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
AA284434 germinal center B cell .a 6160 to 6602 1 to 443       443/443
(100 %)
1 diff
(99.8 %id)
BM720735 eye, fetal eye .a 6230 to 6881 1 to 652       652/652
(100 %)
1 diff
(99.9 %id)
CN291204 embryonic stem cells, DMSO-treated H9 cellline .a 6256 to 6919 9 to 673       665/673
(98 %)
1 diff
(99.9 %id)
DR422017 eye, Pterygium .a 6269 to 7018 1 to 750   tiling clone,   750/750
(100 %)
1 diff
(99.9 %id)
CN293183 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 6285 to 6947 1 to 663       663/663
(100 %)
0 diff
(100 %id)
N73243 liver and spleen .a 6301 to 6622 1 to 332       332/336
(98 %)
16 diff
(95.3 %id)
N77455 liver and spleen .a 6301 to 6652 1 to 356       356/356
(100 %)
2 diff
(99.5 %id)
BG288277 bladder, transitional cell papilloma, cell line .a 6356 to 7124 1 to 758       758/798
(94 %)
23 diff
(97.2 %id)
DA278168 corpus callosum .a 6381 to 6931 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
ES311904 frontal balding hair, skin .a 6413 to 6674 1 to 257       257/257
(100 %)
7 diff
(97.3 %id)
DA928192 small intestine .a 6438 to 7000 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AU310153 neuroblastoma .a 6444 to 7014 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DA384395 thalamus .a 6456 to 7073 2 to 619   capped   618/618
(100 %)
2 diff
(99.7 %id)
BX483173   .a 6458 to 6952 1 to 496       496/496
(100 %)
2 diff
(99.6 %id)
DA040635 bladder .a 6461 to 7014 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
FN046523 breast carcinoma .a 6478 to 6579 101 to 1     Submitted on the opposite strand 101/102
(99 %)
5 diff
(95.1 %id)
FN047718 breast carcinoma .a 6483 to 6579 95 to 1     Submitted on the opposite strand 95/100
(95 %)
2 diff
(98.0 %id)
BF217703 brain, glioblastoma .a 6615 to 7179 1 to 558       558/1394
(40 %)
16 diff
(98.9 %id)
BI669018 brain, hypothalamus .a 6653 to 7184 1 to 531   available from MGC,   531/690
(76 %)
17 diff
(97.6 %id)
BC047111 Brain, hypothalamus .a 6658 to 8468 1 to 1809   tiling clone, available from MGC, AAA   1809/1809
(100 %)
3 diff
(99.9 %id)
TI_44345814   .a 6658 to 7184 90 to 615       526/774
(67 %)
14 diff
(98.2 %id)
CB270668 adipose .a 6725 to 7216 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
BG034089 breast, mammary adenocarcinoma, cell line .a 6740 to 7477 1 to 741       741/963
(76 %)
16 diff
(98.4 %id)
AA338057 endometrium .a 6763 to 7070 1 to 308       308/308
(100 %)
0 diff
(100 %id)
AA382803 testis .a 6870 to 7102 1 to 233       233/233
(100 %)
0 diff
(100 %id)
AL048856 testis .a 6900 to 7389 14 to 503       490/506
(96 %)
1 diff
(99.9 %id)
TI_151771069   .a 6911 to 7623 106 to 828       723/1002
(72 %)
25 diff
(97.6 %id)
DA832232 placenta .a 6998 to 7687 2 to 691   capped   690/692
(99 %)
9 diff
(98.7 %id)
BF352619 head_neck .a 7007 to 7461 16 to 470       455/470
(96 %)
6 diff
(98.8 %id)
DA366705 subthalamic nucleus .a 7008 to 7574 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
CK903771 Islets of Langerhans, Pancreas .a 7010 to 7588 1 to 579   tiling clone,   579/579
(100 %)
0 diff
(100 %id)
CN292689 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 7026 to 7343 1 to 318       318/318
(100 %)
2 diff
(99.4 %id)
BI964140 Islets of Langerhans, Pancreas .a 7026 to 7600 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
BF335313 colon .a 7137 to 7231 14 to 109       96/109
(88 %)
6 diff
(94.5 %id)
FN111221 breast carcinoma .a 7139 to 7219 1 to 81       81/81
(100 %)
2 diff
(97.6 %id)
AA371190 Prostate .a 7201 to 7480 1 to 282       282/285
(98 %)
5 diff
(98.3 %id)
BF693167 muscle (skeletal) .a 7212 to 7860 1 to 640       640/648
(98 %)
23 diff
(96.5 %id)
BG497765 adenocarcinoma, Prostate .a 7218 to 7918 1 to 698       698/824
(84 %)
9 diff
(99.0 %id)
BF667806 brain, primitive neuroectoderm .a 7299 to 7901 1 to 596       596/852
(69 %)
25 diff
(97.1 %id)
BM728417 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 7314 to 7516 1 to 203       203/203
(100 %)
0 diff
(100 %id)
BQ420460 embryonal carcinoma, cell line, testis .a 7316 to 8097 1 to 787       787/877
(89 %)
6 diff
(99.4 %id)
CB141963 Liver .a 7338 to 7736 1 to 399       399/399
(100 %)
6 diff
(98.5 %id)
CB141862 Liver .a 7340 to 7568 1 to 229       229/229
(100 %)
4 diff
(98.3 %id)
CA395894 eye, RPE/choroid .a 7343 to 7873 1 to 531       531/531
(100 %)
0 diff
(100 %id)
CB130707 Liver .a 7396 to 7944 1 to 549       549/549
(100 %)
2 diff
(99.7 %id)
AA834664 ovary .a 7432 to 7786 8 to 362       355/362
(98 %)
6 diff
(98.4 %id)
BE177861 head_neck .a 7470 to 7979 20 to 525       506/526
(96 %)
6 diff
(98.9 %id)
BE178044 head_neck .a 7470 to 7987 31 to 547       517/547
(94 %)
6 diff
(99.0 %id)
BG618260 Liver .a 7478 to 8236 1 to 758       758/760
(99 %)
7 diff
(99.1 %id)
AA235759 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7492 to 7898 1 to 407       407/407
(100 %)
1 diff
(99.8 %id)
AA625539 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7492 to 8007 1 to 517       517/517
(100 %)
3 diff
(99.5 %id)
TI_151733971   .a 7497 to 8112 701 to 86   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 616/900
(68 %)
8 diff
(99.2 %id)
BF693262 muscle (skeletal) .a 7505 to 8139 1 to 643       643/825
(77 %)
20 diff
(97.6 %id)
DN918474   .a 7511 to 8146 1 to 635       635/639
(99 %)
2 diff
(99.7 %id)
CB156018 Liver .a 7518 to 8084 1 to 567       567/567
(100 %)
0 diff
(100 %id)
H13061 placenta .a 7545 to 7997 1 to 462       462/464
(99 %)
16 diff
(96.6 %id)
FN173523 breast carcinoma .a 7551 to 7651 1 to 102       102/102
(100 %)
1 diff
(99.1 %id)
DT220622 brain .a 7564 to 8278 1 to 714       714/714
(100 %)
4 diff
(99.5 %id)
N50469 multiple sclerosis lesions .a 7576 to 7911 1 to 343       343/359
(95 %)
11 diff
(97.0 %id)
CK300472 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 7578 to 8112 552 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 534/534
(100 %)
1 diff
(99.9 %id)
BQ370389 placenta_normal .a 7626 to 7877 7 to 255       249/260
(95 %)
19 diff
(92.7 %id)
R70814 placenta .a 7636 to 8077 1 to 444       444/444
(100 %)
11 diff
(97.6 %id)
CB145903 Liver .a 7649 to 8139 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
BF573524 melanotic melanoma, high MDR, skin .a 7690 to 8355 1 to 661       661/666
(99 %)
19 diff
(97.2 %id)
CB242420 Human Lung Epithelial cells, lung .a 7708 to 8456 765 to 19   AAA   747/747
(100 %)
3 diff
(99.6 %id)
TI_149299137   .a 7720 to 8431 795 to 94   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 702/762
(92 %)
21 diff
(97.3 %id)
TI_149312445   .a 7737 to 8467 840 to 120   AAA   721/883
(81 %)
39 diff
(95.6 %id)
BU742199 eye, fetal eye .a 7738 to 8438 716 to 16   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 701/701
(100 %)
0 diff
(100 %id)
BX113045 ovarian tumor, ovary .a 7764 to 8421 1 to 658       658/661
(99 %)
1 diff
(99.9 %id)
CR740261 ovarian tumor, ovary .a 7764 to 8210 1 to 447       447/447
(100 %)
2 diff
(99.6 %id)
BU570870 testis .a 7765 to 8465 1 to 704       704/905
(77 %)
9 diff
(99.1 %id)
BU198919   .a 7780 to 8464 1 to 685       685/868
(78 %)
15 diff
(98.3 %id)
BU632095 cell lines, Chondrosarcoma .a 7797 to 8461 681 to 19   AAA   663/668
(99 %)
3 diff
(99.6 %id)
AA292969 ovarian tumor, ovary .a 7802 to 8071 1 to 270   fully sequenced,   270/270
(100 %)
0 diff
(100 %id)
AA464989 ovarian tumor, ovary .a 7802 to 8169 1 to 368   fully sequenced,   368/368
(100 %)
1 diff
(99.8 %id)
BQ024776 placenta .a 7820 to 8468 665 to 19   AAA   647/647
(100 %)
2 diff
(99.7 %id)
TI_154154508   .a 7826 to 8468 731 to 89     Submitted on the opposite strand 643/653
(98 %)
0 diff
(100 %id)
BI494868 cochlea, ear .a 7847 to 8386 1 to 540       540/540
(100 %)
4 diff
(99.3 %id)
DN918473   .a 7850 to 8465 617 to 2       616/617
(99 %)
0 diff
(100 %id)
AW500304 lymph .a 7851 to 8468 634 to 17     Submitted on the opposite strand 618/634
(97 %)
0 diff
(100 %id)
BF094221 uterus_tumor .a 7855 to 8093 416 to 178       239/416
(57 %)
3 diff
(99.3 %id)
BU733925 eye, Retina Foveal and Macular .a 7879 to 8475 613 to 17   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 597/597
(100 %)
4 diff
(99.4 %id)
AI040324 parathyroid gland, parathyroid tumor .a 7890 to 8461 584 to 13   AAA   572/572
(100 %)
1 diff
(99.9 %id)
AI935460 Kidney .a 7891 to 8468 584 to 6       579/584
(99 %)
0 diff
(100 %id)
BM975601 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 7904 to 8431 546 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 528/528
(100 %)
0 diff
(100 %id)
CK903770 Islets of Langerhans, Pancreas .a 7906 to 8473 579 to 12   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 568/568
(100 %)
0 diff
(100 %id)
BF000664 colon, colon tumor, RER+ .a 7907 to 8462 560 to 5       556/560
(99 %)
0 diff
(100 %id)
BF446910 Prostate .a 7907 to 8462 556 to 1       556/556
(100 %)
1 diff
(99.9 %id)
DB378312 placenta .a 7913 to 8467 553 to 2       552/553
(99 %)
0 diff
(100 %id)
BI963844 Islets of Langerhans, Pancreas .a 7915 to 8473 570 to 12   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 559/559
(100 %)
0 diff
(100 %id)
AI796981 carcinoid, lung .a 7921 to 8467 547 to 1       547/547
(100 %)
3 diff
(99.5 %id)
BF088004 head_neck .a 7930 to 8205 292 to 18       275/307
(89 %)
0 diff
(100 %id)
DB372194 ovary, tumor tissue .a 7931 to 8478 546 to 1       546/553
(98 %)
21 diff
(96.3 %id)
BF087018 head_neck .a 7934 to 8210 280 to 1       280/282
(99 %)
22 diff
(92.2 %id)
BF087023 head_neck .a 7934 to 8185 262 to 11       252/264
(95 %)
0 diff
(100 %id)
BF087025 head_neck .a 7934 to 8213 297 to 18       280/299
(93 %)
0 diff
(100 %id)
BF087026 head_neck .a 7934 to 8215 289 to 5       285/291
(97 %)
0 diff
(100 %id)
BF087028 head_neck .a 7934 to 8160 230 to 5       226/232
(97 %)
0 diff
(100 %id)
BF087029 head_neck .a 7934 to 8193 259 to 1       259/261
(99 %)
5 diff
(98.1 %id)
BF087030 head_neck .a 7934 to 8199 310 to 41       270/312
(86 %)
0 diff
(100 %id)
BF087031 head_neck .a 7934 to 8195 267 to 5       263/269
(97 %)
0 diff
(100 %id)
BF087951 head_neck .a 7934 to 8215 280 to 4       277/282
(98 %)
0 diff
(100 %id)
BF087989 head_neck .a 7934 to 8140 213 to 7       207/215
(96 %)
0 diff
(100 %id)
BF087994 head_neck .a 7934 to 8210 281 to 5       277/283
(97 %)
0 diff
(100 %id)
BF088002 head_neck .a 7934 to 8210 277 to 2       276/279
(98 %)
0 diff
(100 %id)
BQ358590 head_neck .a 7934 to 8153 220 to 1       220/222
(99 %)
12 diff
(94.6 %id)
BQ358595 head_neck .a 7934 to 8205 281 to 10       272/283
(96 %)
0 diff
(100 %id)
BF087015 head_neck .a 7935 to 8185 254 to 1       254/257
(98 %)
16 diff
(93.8 %id)
AI890157 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 7935 to 8468 542 to 9       534/542
(98 %)
0 diff
(100 %id)
DB332207 small intestine .a 7937 to 8461 525 to 1       525/525
(100 %)
0 diff
(100 %id)
AI949973 2 pooled tumors (clear cell type), Kidney .a 7949 to 8451 503 to 1       503/503
(100 %)
4 diff
(99.3 %id)
DB310746 subthalamic nucleus .a 7954 to 8461 509 to 1       509/509
(100 %)
2 diff
(99.7 %id)
BF087979 head_neck .a 7965 to 8199 237 to 1       237/237
(100 %)
9 diff
(96.3 %id)
BU153032 embryonal carcinoma, cell line, testis .a 7970 to 8461 1 to 494       494/1186
(41 %)
12 diff
(99.0 %id)
AI652063 pooled germ cell tumors .a 7980 to 8480 515 to 15   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 501/501
(100 %)
0 diff
(100 %id)
BF087013 head_neck .a 7984 to 8155 179 to 6       174/179
(97 %)
0 diff
(100 %id)
BQ022255 placenta .a 8003 to 8467 482 to 18   AAA   465/465
(100 %)
1 diff
(99.8 %id)
AA557462 germ cell tumor .a 8010 to 8468 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AI078795 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 8011 to 8467 457 to 1       457/457
(100 %)
0 diff
(100 %id)
AW080589 colon, moderately differentiated adenocarcinoma .a 8013 to 8468 462 to 9       454/462
(98 %)
0 diff
(100 %id)
AI804213 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 8015 to 8467 452 to 1       452/452
(100 %)
1 diff
(99.8 %id)
AI887296 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 8020 to 8467 480 to 33   AAA   448/448
(100 %)
3 diff
(99.4 %id)
AA976310 2 pooled tumors (clear cell type), Kidney .a 8025 to 8468 448 to 5       444/448
(99 %)
0 diff
(100 %id)
AI016158   .a 8039 to 8462 427 to 4       424/427
(99 %)
0 diff
(100 %id)
AA398376 ovarian tumor, ovary .a 8041 to 8428 388 to 1   fully sequenced,   388/388
(100 %)
0 diff
(100 %id)
BG500201 adenocarcinoma, Prostate .a 8042 to 8457 1 to 415   AAA   415/415
(100 %)
1 diff
(99.8 %id)
AW241303 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .a 8048 to 8476 429 to 1       429/429
(100 %)
0 diff
(100 %id)
AA364617 pineal body .a 8049 to 8349 1 to 302       302/302
(100 %)
1 diff
(99.7 %id)
AI635593 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 8061 to 8461 419 to 18   AAA   402/402
(100 %)
1 diff
(99.8 %id)
AI208885   .a 8062 to 8462 403 to 3       401/403
(99 %)
0 diff
(100 %id)
BF059706 pooled germ cell tumors .a 8062 to 8480 433 to 15   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 419/419
(100 %)
1 diff
(99.8 %id)
AA235760 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 8068 to 8468 401 to 1       401/401
(100 %)
0 diff
(100 %id)
AW959848   .a 8074 to 8461 1 to 388   AAA   388/388
(100 %)
0 diff
(100 %id)
BG623287 placenta .a 8077 to 8468 1 to 391   AAA   391/391
(100 %)
1 diff
(99.8 %id)
AI333957 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 8078 to 8457 384 to 5       380/384
(98 %)
0 diff
(100 %id)
AA292711 germinal center B cell .a 8080 to 8471 391 to 1       391/391
(100 %)
1 diff
(99.8 %id)
AA701078 pineal gland .a 8088 to 8461 388 to 15   AAA   374/374
(100 %)
1 diff
(99.8 %id)
AA767950 germinal center B cell .a 8098 to 8461 377 to 14   AAA   364/364
(100 %)
2 diff
(99.5 %id)
R70764 placenta .a 8101 to 8450 359 to 5       355/361
(98 %)
0 diff
(100 %id)
H13268 placenta .a 8106 to 8467 373 to 2       372/385
(96 %)
0 diff
(100 %id)
N53058 liver and spleen .a 8122 to 8459 353 to 15   AAA   339/351
(96 %)
5 diff
(98.6 %id)
AA455270 ovarian tumor, ovary .a 8139 to 8428 290 to 1   fully sequenced,   290/290
(100 %)
0 diff
(100 %id)
AA995091 Kidney .a 8158 to 8467 309 to 1       309/309
(100 %)
2 diff
(99.4 %id)
AI566674 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 8169 to 8467 323 to 25   AAA   299/299
(100 %)
3 diff
(99.0 %id)
BF086143 placenta_normal .a 8171 to 8465 297 to 4       294/300
(98 %)
0 diff
(100 %id)
BF086161 placenta_normal .a 8171 to 8465 297 to 4       294/300
(98 %)
0 diff
(100 %id)
BF092891 testis_normal .a 8171 to 8395 231 to 4       228/234
(97 %)
0 diff
(100 %id)
BQ376491 testis_normal .a 8171 to 8472 309 to 10       300/311
(96 %)
0 diff
(100 %id)
CV357831 testis_normal .a 8171 to 8403 254 to 31     Submitted on the opposite strand 224/257
(87 %)
0 diff
(100 %id)
BF092881 testis_normal .a 8173 to 8465 8 to 292       285/304
(93 %)
13 diff
(95.8 %id)
BF089187 head_neck .a 8184 to 8465 292 to 11       282/292
(96 %)
0 diff
(100 %id)
D52194   .a 8188 to 8475 287 to 1       287/287
(100 %)
3 diff
(99.0 %id)
R77646 placenta .a 8189 to 8450 265 to 2       264/266
(99 %)
0 diff
(100 %id)
AW770208 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 8203 to 8470 267 to 1       267/267
(100 %)
1 diff
(99.7 %id)
AI208878   .a 8237 to 8462 227 to 2       226/227
(99 %)
0 diff
(100 %id)
AA382439 testis .a 8264 to 8468 204 to 1       204/204
(100 %)
1 diff
(99.6 %id)
AA382328 testis .a 8269 to 8468 199 to 1       199/199
(100 %)
1 diff
(99.5 %id)
BF800049 colon_ins .a 8269 to 8402 154 to 21     Submitted on the opposite strand 134/154
(87 %)
0 diff
(100 %id)
AW511729 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 8270 to 8656 387 to 1   tiling clone,   387/387
(100 %)
1 diff
(99.8 %id)
AA587992 adrenal adenoma, adrenal gland .a 8279 to 8460 182 to 1       182/182
(100 %)
1 diff
(99.5 %id)
N50415 multiple sclerosis lesions .a 8296 to 8450 160 to 6       155/160
(96 %)
0 diff
(100 %id)
AA382442 testis .a 8326 to 8468 142 to 1       142/142
(100 %)
1 diff
(99.3 %id)
AA382502 testis .a 8326 to 8468 142 to 1       142/142
(100 %)
1 diff
(99.3 %id)
AA382393 testis .a 8337 to 8468 131 to 1       131/131
(100 %)
1 diff
(99.3 %id)
DA324329 hippocampus .b 1 to 437 2 to 438   tiling clone, capped   437/437
(100 %)
0 diff
(100 %id)
DB309289 hippocampus .b 3830 to 4412 583 to 1   tiling clone,   583/583
(100 %)
0 diff
(100 %id)
AL596748 human spinal cord .c 1 to 606 12 to 618   tiling clone,   607/619
(98 %)
11 diff
(98.3 %id)
AK298528   .c 89 to 1848 1 to 1760   tiling clone,   1760/1760
(100 %)
2 diff
(99.9 %id)
DC363570   .c 89 to 658 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
CB989225 Human Placenta, placenta .d 1 to 702 27 to 731   tiling clone,   705/784
(89 %)
12 diff
(98.5 %id)
CD109391 Human Placenta, placenta .d 1 to 716 27 to 743 L222F T227N E228* tiling clone,   717/787
(91 %)
12 diff
(98.5 %id)
DA232289 brain .e 1 to 562 2 to 564 L29X A30G Q31P R32E Q33T ... tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
BI040613 nervous_tumor .f 1 to 419 1 to 419 I50V tiling clone,   419/420
(99 %)
3 diff
(99.3 %id)
DA571154 whole embryo, mainly head .g-u 1 to 832 2 to 832   tiling clone, capped   831/832
(99 %)
8 diff
(99.1 %id)
AA308887 brain, cerebellum .g-u 751 to 1063 1 to 313   tiling clone,   313/313
(100 %)
1 diff
(99.7 %id)
CD245949 White Matter .g-u 963 to 1565 18 to 620 exact tiling clone, AAA   603/620
(97 %)
6 diff
(99.1 %id)
DB357985 whole embryo, mainly head .g-u 991 to 1564 573 to 1 Q2X G3X D8X D28A R29G ...     573/575
(99 %)
15 diff
(97.4 %id)
BQ023970 placenta .g-u 1108 to 1582 475 to 1       475/475
(100 %)
0 diff
(100 %id)
AK021838 whole embryo, mainly head .g-u 1236 to 2599 1 to 1367   tiling clone, available from FLJ,   1367/1367
(100 %)
3 diff
(99.8 %id)
AU119472 whole embryo, mainly head .g-u 1237 to 1998 2 to 767   capped   766/766
(100 %)
4 diff
(99.5 %id)
AU145806 whole embryo, mainly head .g-u 2035 to 2599 550 to 1   tiling clone,   550/550
(100 %)
34 diff
(93.9 %id)
FN150294 breast carcinoma .g-u 2203 to 2302 1 to 99       99/99
(100 %)
7 diff
(93.0 %id)
AA522862 metastatic prostate bone lesion .g-u 2351 to 2608 258 to 1   tiling clone,   258/262
(98 %)
1 diff
(99.7 %id)
FN066476 breast carcinoma .g-u 2531 to 2597 70 to 4     Submitted on the opposite strand 67/70
(95 %)
0 diff
(100 %id)
FN067906 breast carcinoma .g-u 2531 to 2599 68 to 1     Submitted on the opposite strand 68/68
(100 %)
3 diff
(95.6 %id)
AL042565 testis .h-u 1 to 660 1 to 660   tiling clone,   660/660
(100 %)
0 diff
(100 %id)
DA806139 brain .h-u 507 to 1073 2 to 568 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
AW367814 head_neck .i-u 1 to 632 1 to 633 V12G L13T H14P G15R L16S ... tiling clone,   633/633
(100 %)
12 diff
(98.2 %id)
DB522023 testis .i-u 62 to 770 1 to 701 H14P L16S L17A R19* tiling clone, Submitted on the opposite strand 701/701
(100 %)
25 diff
(96.5 %id)
BF349618 head_neck .i-u 65 to 387 94 to 418       325/418
(77 %)
10 diff
(97.7 %id)
BE144503 head_neck .i-u 137 to 696 557 to 3 G2P A3E E4V V5P S6F ... tiling clone, Submitted on the opposite strand 555/559
(99 %)
0 diff
(100 %id)
FN088480 breast carcinoma .i-u 505 to 613 1 to 111       111/111
(100 %)
2 diff
(98.2 %id)
AA505042   .j-u 1 to 293 1 to 292 exact tiling clone,   292/292
(100 %)
6 diff
(98.0 %id)
BF330019 breast_normal Gene NCOA2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h-u, .i-u, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI