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Gene NCK1andIL20RBTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
332 supporting clones for gene NCK1andIL20RB back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_006153.4   .a 1 to 1935 2 to 1936 exact RefSeq, AAA   1936/1936
(100 %)
0 diff
(100 %id)
DB208167 trachea .a 1 to 545 3 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA265476 caudate nucleus .a 1 to 553 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB117533 thymus .a 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
DA825667 pericardium .a 11 to 565 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DN995002 brain, whole brain .a 12 to 751 32 to 771       740/771
(95 %)
7 diff
(99.1 %id)
BF686176 leiomyosarcoma cell line, uterus .a 22 to 762 1 to 754       754/820
(91 %)
31 diff
(96.3 %id)
DA961017 Spleen .a 22 to 563 2 to 543   capped   542/542
(100 %)
3 diff
(99.5 %id)
BC006403 Uterus, leiomyosarcoma .a 23 to 1935 1 to 1913 exact tiling clone, available from MGC, AAA   1913/1913
(100 %)
0 diff
(100 %id)
BP374700 umbilical cord .a 23 to 601 1 to 579       579/583
(99 %)
1 diff
(99.9 %id)
DB442693 testis .a 25 to 473 1 to 449       449/449
(100 %)
1 diff
(99.8 %id)
DB453876 testis .a 25 to 521 1 to 497       497/497
(100 %)
0 diff
(100 %id)
DB491348 hypothalamus .a 25 to 447 1 to 423       423/424
(99 %)
7 diff
(98.4 %id)
DB492537 hypothalamus .a 25 to 467 1 to 442       442/442
(100 %)
3 diff
(99.4 %id)
DA567702   .a 25 to 488 2 to 465   capped   464/464
(100 %)
0 diff
(100 %id)
AU100105   .a 25 to 324 1 to 300       300/300
(100 %)
1 diff
(99.7 %id)
AU107243   .a 25 to 74 1 to 50       50/50
(100 %)
0 diff
(100 %id)
BP292585 lung .a 25 to 605 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB150505 thymus .a 25 to 588 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA244386 brain .a 26 to 623 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA247347 brain .a 26 to 608 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA265787 caudate nucleus .a 26 to 577 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA327737 hippocampus .a 26 to 571 2 to 547   capped   546/547
(99 %)
1 diff
(99.9 %id)
DA372629 thalamus .a 26 to 568 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA752837   .a 26 to 593 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA824468 pericardium .a 26 to 547 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DB018253 esophageal, tumor tissue .a 26 to 591 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB062028 testis .a 26 to 580 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB139592 thymus .a 26 to 571 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DB152585 thymus .a 26 to 593 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB157605 thymus .a 26 to 619 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DB217982 trachea .a 26 to 526 2 to 503   capped   502/502
(100 %)
2 diff
(99.7 %id)
DA113449 cerebellum .a 27 to 563 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DA538104 Kidney .a 28 to 591 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA339321 hippocampus .a 30 to 617 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DB112785 thymus .a 33 to 606 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB280400 uterus .a 33 to 564 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
CD701152 normal nasopharynx .a 39 to 563 31 to 555       525/555
(94 %)
7 diff
(98.8 %id)
X17576   .a 44 to 1435 16 to 1407 exact     1392/1414
(98 %)
13 diff
(99.1 %id)
AL597174   .a 45 to 496 1 to 452       452/452
(100 %)
0 diff
(100 %id)
FN169184 breast carcinoma .a 50 to 117 1 to 65       65/65
(100 %)
5 diff
(92.4 %id)
DA546725   .a 51 to 547 2 to 498   capped   497/497
(100 %)
0 diff
(100 %id)
CF994948 Human Placenta, placenta .a 52 to 828 20 to 798       779/800
(97 %)
10 diff
(98.8 %id)
DB010940 colon, tumor tissue .a 53 to 638 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
AK312692   .a 56 to 1263 1 to 1208 G78V     1208/1208
(100 %)
1 diff
(100.0 %id)
BP275282 Kidney .a 56 to 635 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA009227 adrenal gland .a 57 to 613 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA715871   .a 57 to 590 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DB101553 thymus .a 57 to 623 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB146873 thymus .a 57 to 608 2 to 555   capped   554/554
(100 %)
4 diff
(99.3 %id)
DA129707 alzheimer cortex .a 60 to 594 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA824746 pericardium .a 60 to 622 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
CN371349 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 77 to 655 1 to 579       579/579
(100 %)
0 diff
(100 %id)
AI540619 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 78 to 490 1 to 413     Submitted on the opposite strand 413/413
(100 %)
1 diff
(99.8 %id)
N90137 lung .a 79 to 527 1 to 454     Submitted on the opposite strand 454/455
(99 %)
13 diff
(97.2 %id)
AA280214 germinal center B cell .a 79 to 435 1 to 357     Submitted on the opposite strand 357/358
(99 %)
1 diff
(99.8 %id)
AI204366   .a 79 to 617 1 to 539     Submitted on the opposite strand 539/539
(100 %)
0 diff
(100 %id)
AI358897 brain, glioblastoma (pooled) .a 79 to 580 1 to 502     Submitted on the opposite strand 502/502
(100 %)
0 diff
(100 %id)
AW007034 anaplastic oligodendroglioma, brain .a 79 to 344 1 to 266     Submitted on the opposite strand 266/266
(100 %)
0 diff
(100 %id)
AI056116 parathyroid gland, parathyroid tumor .a 81 to 696 2 to 614     Submitted on the opposite strand 613/614
(99 %)
12 diff
(98.1 %id)
DB094035 testis .a 94 to 632 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
AI160593 placenta .a 97 to 609 1 to 513     Submitted on the opposite strand 513/513
(100 %)
0 diff
(100 %id)
AI359563 brain, glioblastoma (pooled) .a 97 to 475 1 to 379     Submitted on the opposite strand 379/379
(100 %)
0 diff
(100 %id)
AW183308 pooled .a 106 to 383 1 to 279     Submitted on the opposite strand 279/309
(90 %)
13 diff
(95.8 %id)
AI149165 placenta .a 109 to 629 13 to 533     Submitted on the opposite strand 521/533
(97 %)
7 diff
(98.7 %id)
BI458772 testis .a 109 to 655 40 to 587       548/713
(76 %)
34 diff
(95.3 %id)
BU155347 melanotic melanoma, skin .a 109 to 842 757 to 26     Submitted on the opposite strand 732/779
(93 %)
2 diff
(99.8 %id)
TI_154136290   .a 109 to 930 90 to 915     Submitted on the opposite strand 826/915
(90 %)
40 diff
(95.7 %id)
AI377384 pooled .a 110 to 1046 14 to 949     Submitted on the opposite strand 936/988
(94 %)
58 diff
(94.2 %id)
BG715856 brain, hypothalamus .a 110 to 768 25 to 686       662/686
(96 %)
15 diff
(97.9 %id)
TI_45213298   .a 110 to 832 111 to 841       731/844
(86 %)
18 diff
(97.9 %id)
DB450709 testis .a 112 to 556 50 to 496       447/496
(90 %)
8 diff
(98.4 %id)
AI088699 brain, glioblastoma (pooled) .a 114 to 594 1 to 482     Submitted on the opposite strand 482/482
(100 %)
32 diff
(93.4 %id)
CV026910 mixed .a 130 to 720 1 to 587       587/587
(100 %)
5 diff
(99.2 %id)
TI_1948124014   .a 130 to 968 132 to 979       848/1372
(61 %)
34 diff
(97.6 %id)
TI_1948124015   .a 130 to 968 138 to 978       841/1461
(57 %)
44 diff
(97.0 %id)
TI_1948125057   .a 130 to 1248 134 to 1253       1118/1297
(86 %)
72 diff
(94.5 %id)
TI_1948125059   .a 130 to 830 128 to 833       706/1398
(50 %)
24 diff
(98.3 %id)
TI_1948124016   .a 132 to 822 133 to 823       691/1349
(51 %)
17 diff
(98.8 %id)
CD243888 testis .a 158 to 649 101 to 594       494/1186
(41 %)
12 diff
(99.0 %id)
AA767696 germinal center B cell .a 167 to 613 1 to 447     Submitted on the opposite strand 447/447
(100 %)
0 diff
(100 %id)
AA910439 pooled .a 168 to 737 1 to 562     Submitted on the opposite strand 562/562
(100 %)
33 diff
(94.2 %id)
TI_1948125061   .a 198 to 1262 1176 to 127       1050/1344
(78 %)
39 diff
(97.1 %id)
AA093920   .a 201 to 460 1 to 255       255/260
(98 %)
9 diff
(96.6 %id)
BM461671 leiomyosarcoma, uterus .a 219 to 768 1 to 551       551/1055
(52 %)
35 diff
(96.7 %id)
AA355775   .a 281 to 531 1 to 251       251/253
(99 %)
2 diff
(99.3 %id)
AA884880 pooled .a 283 to 717 1 to 430     Submitted on the opposite strand 430/434
(99 %)
17 diff
(96.1 %id)
BF802624 colon_ins .a 299 to 695 407 to 11     Submitted on the opposite strand 397/407
(97 %)
0 diff
(100 %id)
TI_1948125062   .a 354 to 1262 1029 to 124       906/1411
(64 %)
22 diff
(98.5 %id)
TI_1948125060   .a 355 to 1262 1040 to 123       918/1363
(67 %)
38 diff
(97.3 %id)
TI_1948124018   .a 363 to 1262 1034 to 128       907/1423
(63 %)
27 diff
(98.2 %id)
FN080601 breast carcinoma .a 379 to 472 94 to 1     Submitted on the opposite strand 94/94
(100 %)
0 diff
(100 %id)
BU959418 mixed (pool of 40 RNAs) .a 464 to 979 1 to 520       520/764
(68 %)
35 diff
(95.5 %id)
BP263999 small intestine .a 478 to 1062 1 to 585       585/585
(100 %)
2 diff
(99.7 %id)
TI_1948124017   .a 534 to 1262 854 to 123       732/1359
(53 %)
8 diff
(99.5 %id)
FN095643 breast carcinoma .a 570 to 665 1 to 93       93/94
(98 %)
4 diff
(95.8 %id)
C18884 placenta .a 618 to 996 1 to 377       377/377
(100 %)
7 diff
(98.2 %id)
D58896   .a 618 to 1034 1 to 417       417/417
(100 %)
0 diff
(100 %id)
BP250540 hippocampus .a 707 to 1288 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CB070168 Pancreas, Purified pancreatic islet .a 708 to 1154 1 to 447   fully sequenced,   447/447
(100 %)
4 diff
(99.2 %id)
CD709530 normal nasopharynx .a 734 to 1209 22 to 498       477/498
(95 %)
11 diff
(97.8 %id)
AA923473 pooled .a 755 to 1068 35 to 348     Submitted on the opposite strand 314/348
(90 %)
6 diff
(98.3 %id)
CR977181 T-Lymphocytes .a 775 to 1630 1 to 855       855/883
(96 %)
3 diff
(99.7 %id)
CB132726 Liver .a 852 to 1482 1 to 631       631/631
(100 %)
0 diff
(100 %id)
TI_149293348   .a 854 to 1673 892 to 84   AAA   809/945
(85 %)
18 diff
(98.1 %id)
BP292848 lung .a 865 to 1439 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
BQ354598 head_neck .a 909 to 1365 1 to 462       462/462
(100 %)
18 diff
(96.2 %id)
FN068111 breast carcinoma .a 915 to 972 1 to 58       58/59
(98 %)
1 diff
(98.4 %id)
AA151454   .a 950 to 1443 1 to 508   fully sequenced,   508/508
(100 %)
17 diff
(96.7 %id)
BM975093 lung .a 983 to 1673 708 to 19   AAA   690/690
(100 %)
1 diff
(99.9 %id)
AI433663 Kidney .a 985 to 1673 689 to 1       689/693
(99 %)
3 diff
(99.6 %id)
BF671694 muscle (skeletal) .a 989 to 1710 1 to 720       720/724
(99 %)
13 diff
(98.3 %id)
AA278867 germinal center B cell .a 995 to 1308 1 to 312   fully sequenced,   312/312
(100 %)
1 diff
(99.7 %id)
AW182810 pooled .a 1023 to 1682 682 to 24   AAA   659/659
(100 %)
7 diff
(99.0 %id)
BG432844 Kidney .a 1027 to 1698 1 to 679       679/895
(75 %)
14 diff
(98.5 %id)
CF135933 lymph .a 1030 to 1651 1 to 610       610/638
(95 %)
14 diff
(97.9 %id)
BU079139 Pancreas, Purified pancreatic islet .a 1030 to 1381 1 to 351   fully sequenced,   351/351
(100 %)
4 diff
(98.9 %id)
BQ002749 Chondrosarcoma, Left Pelvis .a 1033 to 1673 659 to 19   AAA   641/641
(100 %)
0 diff
(100 %id)
TI_154164609   .a 1036 to 1651 77 to 680       604/849
(71 %)
12 diff
(98.6 %id)
AI003628 pineal gland .a 1041 to 1669 633 to 2       632/640
(98 %)
2 diff
(99.7 %id)
BG402926 bladder, transitional cell papilloma, cell line .a 1092 to 1668 1 to 577   AAA   577/577
(100 %)
0 diff
(100 %id)
BX385016   .a 1103 to 1605 511 to 10       502/511
(98 %)
0 diff
(100 %id)
BI059131 placenta_normal .a 1104 to 1516 422 to 7       416/422
(98 %)
0 diff
(100 %id)
BF032608 adenocarcinoma, ovary .a 1105 to 1864 1 to 754       754/816
(92 %)
9 diff
(98.9 %id)
BF840437 head_neck .a 1108 to 1640 533 to 2     Submitted on the opposite strand 532/533
(99 %)
0 diff
(100 %id)
CB135080 Liver .a 1109 to 1694 11 to 596       586/596
(98 %)
6 diff
(99.0 %id)
AI992169 thymus, pooled .a 1123 to 1671 554 to 8       547/614
(89 %)
0 diff
(100 %id)
CB069676 Pancreas, Purified pancreatic islet .a 1124 to 1669 545 to 1   fully sequenced,   545/545
(100 %)
7 diff
(98.8 %id)
FN125648 breast carcinoma .a 1147 to 1235 93 to 5     Submitted on the opposite strand 89/94
(94 %)
0 diff
(100 %id)
BE925784 breast_normal .a 1175 to 1633 466 to 9       458/466
(98 %)
0 diff
(100 %id)
BE925791 breast_normal .a 1175 to 1604 430 to 3       428/430
(99 %)
0 diff
(100 %id)
AI935447 Kidney .a 1177 to 1935 779 to 22   AAA   758/758
(100 %)
20 diff
(97.4 %id)
AW023198 cochlea, ear .a 1197 to 1660 8 to 474       467/474
(98 %)
6 diff
(98.8 %id)
AI591085 normal gingiva (cell line from immortalizedkeratinocytes) .a 1201 to 1931 729 to 1       729/729
(100 %)
3 diff
(99.6 %id)
AI075925   .a 1203 to 1935 742 to 11   AAA   732/732
(100 %)
5 diff
(99.4 %id)
T40023 Liver .a 1210 to 1451 1 to 242       242/244
(99 %)
2 diff
(99.2 %id)
BM818262 stomach .a 1212 to 1743 1 to 531       531/531
(100 %)
1 diff
(99.9 %id)
CB999939 Pooled-Skin .a 1226 to 1930 1 to 706       706/711
(99 %)
7 diff
(99.1 %id)
DB573872 hypothalamus .a 1229 to 1681 1 to 453     Submitted on the opposite strand 453/454
(99 %)
1 diff
(99.8 %id)
TI_149304105   .a 1233 to 1935 790 to 88   AAA   703/707
(99 %)
1 diff
(99.9 %id)
BM981906 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1250 to 1935 704 to 19   AAA   686/686
(100 %)
0 diff
(100 %id)
BX281182 brain, hypothalamus .a 1260 to 1682 450 to 28   AAA Submitted on the opposite strand 423/423
(100 %)
1 diff
(99.8 %id)
FN049664 breast carcinoma .a 1269 to 1369 101 to 1     Submitted on the opposite strand 101/101
(100 %)
0 diff
(100 %id)
AA278763 germinal center B cell .a 1278 to 1684 407 to 1   fully sequenced,   407/407
(100 %)
0 diff
(100 %id)
AI671778 Kidney .a 1310 to 1931 648 to 26   AAA   623/623
(100 %)
7 diff
(98.9 %id)
TI_154139548   .a 1312 to 1933 702 to 80     Submitted on the opposite strand 623/624
(99 %)
22 diff
(96.5 %id)
AW262107 lung, two pooled squamous cell carcinomas .a 1313 to 1933 624 to 4       621/624
(99 %)
0 diff
(100 %id)
BF758671 colon .a 1320 to 1460 140 to 1     Submitted on the opposite strand 140/152
(92 %)
10 diff
(93.5 %id)
BE719975 head_neck .a 1325 to 1468 166 to 23       144/167
(86 %)
0 diff
(100 %id)
BF088270 head_neck .a 1345 to 1458 1 to 114       114/115
(99 %)
6 diff
(94.8 %id)
BU078859 Pancreas, Purified pancreatic islet .a 1351 to 1685 353 to 20   fully sequenced, AAA   334/334
(100 %)
11 diff
(96.8 %id)
AA151455   .a 1441 to 1930 500 to 3   fully sequenced,   498/500
(99 %)
0 diff
(100 %id)
BP424294 small intestine .a 1456 to 1932 1 to 477     Submitted on the opposite strand 477/479
(99 %)
1 diff
(99.8 %id)
W16804 lung .a 1484 to 1936 441 to 1     Submitted on the opposite strand 441/478
(92 %)
12 diff
(97.5 %id)
AI754384 bone marrow stroma .a 1485 to 1932 476 to 29   AAA   448/448
(100 %)
0 diff
(100 %id)
DB563558 hypothalamus .a 1490 to 1935 1 to 445     Submitted on the opposite strand 445/445
(100 %)
1 diff
(99.8 %id)
FN134807 breast carcinoma .a 1494 to 1606 108 to 1     Submitted on the opposite strand 108/117
(92 %)
6 diff
(94.9 %id)
CB962741 Blood vessels - aorta, basilar and artery .a 1495 to 1859 1 to 374       374/930
(40 %)
17 diff
(98.2 %id)
DB519331 testis .a 1502 to 1935 1 to 434     Submitted on the opposite strand 434/434
(100 %)
0 diff
(100 %id)
DB561832 hypothalamus .a 1503 to 1935 1 to 434     Submitted on the opposite strand 434/434
(100 %)
4 diff
(99.1 %id)
DB516173 testis .a 1505 to 1935 1 to 432     Submitted on the opposite strand 432/432
(100 %)
1 diff
(99.8 %id)
DB557312 hypothalamus .a 1506 to 1935 1 to 442     Submitted on the opposite strand 442/442
(100 %)
12 diff
(97.3 %id)
AW403036 lymph .a 1521 to 1935 420 to 6     Submitted on the opposite strand 415/420
(98 %)
0 diff
(100 %id)
AI360552 adenocarcinoma, Pancreas .a 1529 to 1931 412 to 10       403/412
(97 %)
0 diff
(100 %id)
AI150310   .a 1530 to 1936 408 to 3       406/408
(99 %)
0 diff
(100 %id)
AA746252 Kidney .a 1539 to 1931 403 to 11   AAA   393/393
(100 %)
0 diff
(100 %id)
DB507575 testis .a 1548 to 1935 1 to 388     Submitted on the opposite strand 388/388
(100 %)
1 diff
(99.8 %id)
BU752149 placenta .a 1567 to 1931 382 to 18   AAA   365/365
(100 %)
1 diff
(99.8 %id)
AW418577 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1574 to 1936 369 to 7       363/369
(98 %)
0 diff
(100 %id)
BF445782 sympathetic trunk .a 1597 to 1935 350 to 12   AAA   339/339
(100 %)
0 diff
(100 %id)
AA280548 germinal center B cell .a 1612 to 1935 324 to 1     Submitted on the opposite strand 324/324
(100 %)
0 diff
(100 %id)
AL702664 human skeletal muscle .a 1617 to 1928 1 to 312       312/312
(100 %)
6 diff
(98.1 %id)
AA724030 pooled .a 1663 to 1935 273 to 1       273/273
(100 %)
0 diff
(100 %id)
BF445915 breast, invasive ductal carcinoma, 3 pooled samples .a 1719 to 1936 227 to 9       219/227
(96 %)
0 diff
(100 %id)
FN054582 breast carcinoma .a 1737 to 1847 1 to 111       111/111
(100 %)
0 diff
(100 %id)
FN107183 breast carcinoma .a 1747 to 1822 75 to 2     Submitted on the opposite strand 74/89
(83 %)
0 diff
(100 %id)
BI253726 cervical carcinoma cell line, cervix .a 1748 to 1935 1 to 190   AAA   190/190
(100 %)
2 diff
(99.0 %id)
DA364391 subthalamic nucleus .b 1 to 576 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA539076 Kidney .b 1 to 584 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA855124 placenta .b 1 to 594 2 to 595   tiling clone, capped   594/594
(100 %)
0 diff
(100 %id)
DB105407 thymus .b 23 to 571 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA420797 cervix .b 26 to 578 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
TI_45212062   .b 26 to 636 80 to 689       610/689
(88 %)
7 diff
(99.0 %id)
BI598512 brain, hypothalamus .b 32 to 636 1 to 608       608/608
(100 %)
2 diff
(99.7 %id)
BP374255 umbilical cord .b 32 to 522 1 to 502       502/582
(86 %)
23 diff
(96.1 %id)
DA462167 tongue, tumor tissue .b 33 to 620 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
BG707342 brain, hypothalamus .b 36 to 786 8 to 775       768/775
(99 %)
45 diff
(94.2 %id)
DA597344   .b 53 to 573 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DA558477   .b 54 to 620 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
BX490501   .b 59 to 417 1 to 359       359/359
(100 %)
2 diff
(99.5 %id)
DA602208   .b 60 to 623 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA747943   .b 60 to 628 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB134398 thymus .b 60 to 483 2 to 426   capped   425/425
(100 %)
1 diff
(99.8 %id)
DB143601 thymus .b 60 to 624 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB245728 uterus, tumor tissue .b 60 to 638 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB464091 hippocampus .b 64 to 533 1 to 470       470/470
(100 %)
1 diff
(99.8 %id)
DB487881 hypothalamus .b 64 to 501 1 to 438       438/438
(100 %)
0 diff
(100 %id)
AA969601 pooled .b 79 to 496 1 to 418     Submitted on the opposite strand 418/418
(100 %)
0 diff
(100 %id)
DB502646 hypothalamus .b 128 to 588 4 to 464       461/464
(99 %)
0 diff
(100 %id)
BI598035 brain, hypothalamus .b 128 to 866 9 to 755       747/758
(98 %)
12 diff
(98.5 %id)
BG034772 adenocarcinoma, cell line, Liver .b 532 to 1221 1 to 687   tiling clone,   687/711
(96 %)
12 diff
(98.4 %id)
DB112237 thymus .c 1 to 586 2 to 588   tiling clone, capped   587/587
(100 %)
1 diff
(99.9 %id)
AI813646 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 108 to 800 1 to 692   tiling clone, Submitted on the opposite strand 692/692
(100 %)
21 diff
(97.0 %id)
BQ428732 testis .c 714 to 1508 1 to 800   tiling clone,   800/800
(100 %)
12 diff
(98.5 %id)
BI008984 kidney_tumor .c 874 to 1387 1 to 514       514/514
(100 %)
7 diff
(98.7 %id)
BI007404 kidney_tumor .c 883 to 1428 1 to 547   tiling clone,   547/547
(100 %)
4 diff
(99.3 %id)
BE221921 carcinoid, lung .c 916 to 1395 1 to 480     Submitted on the opposite strand 480/480
(100 %)
7 diff
(98.6 %id)
BF735087 amnion_normal .c 917 to 1240 340 to 19     Submitted on the opposite strand 322/344
(93 %)
0 diff
(100 %id)
BF735254 amnion_normal .c 927 to 1239 6 to 316       311/316
(98 %)
6 diff
(98.2 %id)
BF735398 amnion_normal .c 928 to 1193 266 to 1     Submitted on the opposite strand 266/266
(100 %)
1 diff
(99.7 %id)
DC345156 colon .d 1 to 506 1 to 507       507/507
(100 %)
1 diff
(99.9 %id)
NM_001190796.1   .d 1 to 1700 1 to 1700 exact RefSeq, AAA   1700/1700
(100 %)
0 diff
(100 %id)
DC368248   .d 1 to 574 1 to 575       575/575
(100 %)
2 diff
(99.7 %id)
BP339594 Spleen .d 1 to 585 1 to 586   tiling clone,   586/586
(100 %)
1 diff
(99.9 %id)
AL701783 human skeletal muscle .d 9 to 575 1 to 566       566/566
(100 %)
2 diff
(99.7 %id)
BQ890591 dorsal root ganglia .d 10 to 862 26 to 888       863/995
(86 %)
29 diff
(97.1 %id)
BM955754 tonsil .d 20 to 617 7 to 604       598/604
(99 %)
9 diff
(98.6 %id)
FN107684 breast carcinoma .d 25 to 100 1 to 75       75/84
(89 %)
4 diff
(95.3 %id)
CB268831 adipose .d 26 to 431 1 to 409       409/449
(91 %)
9 diff
(98.0 %id)
CD688343 normal nasopharynx .d 38 to 668 37 to 666       630/666
(94 %)
7 diff
(99.0 %id)
CD696089 normal nasopharynx .d 38 to 545 17 to 524       508/524
(96 %)
6 diff
(98.9 %id)
AK301460 synovial membrane tissue from rheumatoidarthritis .d 43 to 1459 1 to 1417 exact tiling clone,   1417/1417
(100 %)
0 diff
(100 %id)
DC295894 synovial membrane tissue from rheumatioidarthritis .d 43 to 586 1 to 544       544/544
(100 %)
0 diff
(100 %id)
CD690558 normal nasopharynx .d 61 to 655 24 to 618       595/618
(96 %)
10 diff
(98.4 %id)
BM955756 tonsil .d 70 to 625 16 to 571       556/645
(86 %)
12 diff
(98.2 %id)
BM955755 tonsil .d 70 to 625 16 to 571       556/645
(86 %)
12 diff
(98.2 %id)
BM955757 tonsil .d 70 to 625 16 to 571       556/645
(86 %)
12 diff
(98.2 %id)
AY358305   .e 1 to 2040 1 to 2040 exact tiling clone, AAA   2040/2040
(100 %)
0 diff
(100 %id)
NM_144717.2   .e 1 to 2040 1 to 2040 exact RefSeq, AAA   2040/2040
(100 %)
0 diff
(100 %id)
AL555655 placenta .e 120 to 1031 1 to 902       902/902
(100 %)
13 diff
(98.6 %id)
AK316084 thalamus .e 121 to 1614 1 to 1494 exact     1494/1494
(100 %)
0 diff
(100 %id)
DA373769 thalamus .e 122 to 664 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
AK296832 tongue, tumor tissue .e 129 to 1367 1 to 1239 exact     1239/1239
(100 %)
1 diff
(100.0 %id)
DA382146 thalamus .e 130 to 690 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BC063696 Skin, squamous cell carcinoma .e 137 to 2044 1 to 1908 exact available from MGC, AAA   1908/1908
(100 %)
3 diff
(99.9 %id)
BG675539 skin, squamous cell carcinoma .e 137 to 939 1 to 796       796/803
(99 %)
19 diff
(97.7 %id)
BQ934337 large cell carcinoma, lung .e 137 to 865 15 to 747       733/877
(83 %)
15 diff
(98.3 %id)
CR590848 HeLa cells Cot 25-normalized .e 138 to 2015 1 to 1878 exact     1878/1878
(100 %)
0 diff
(100 %id)
CR604488 HeLa cells Cot 25-normalized .e 138 to 2030 1 to 1893 exact     1893/1893
(100 %)
0 diff
(100 %id)
BX402918   .e 138 to 1195 1 to 1055 E73X D273B E291G V292G T297R ...     1055/1055
(100 %)
7 diff
(99.4 %id)
BX341656   .e 138 to 1046 1 to 907       907/907
(100 %)
4 diff
(99.6 %id)
DR423111 eye, Pterygium .e 230 to 824 1 to 595       595/595
(100 %)
2 diff
(99.7 %id)
EL737090 mixed .e 250 to 892 1 to 643       643/643
(100 %)
1 diff
(99.9 %id)
TI_1948230383   .e 250 to 686 138 to 574   fully sequenced,   437/574
(76 %)
6 diff
(99.0 %id)
TI_1948230552   .e 250 to 974 134 to 859       727/1224
(59 %)
28 diff
(97.8 %id)
TI_1948230713   .e 250 to 733 133 to 616   fully sequenced,   484/616
(78 %)
9 diff
(98.6 %id)
TI_1948230878   .e 250 to 930 135 to 824       690/1375
(50 %)
24 diff
(98.3 %id)
TI_1948230384   .e 625 to 1184 688 to 128   fully sequenced,   561/688
(81 %)
0 diff
(100 %id)
TI_1948070826   .e 672 to 1126 128 to 582       455/479
(94 %)
6 diff
(98.8 %id)
TI_1948071135   .e 672 to 1180 129 to 637       509/533
(95 %)
6 diff
(98.9 %id)
TI_1948071447   .e 672 to 1184 130 to 642       513/541
(94 %)
7 diff
(98.8 %id)
TI_1948071860   .e 672 to 1104 126 to 558       433/457
(94 %)
6 diff
(98.7 %id)
TI_1948072179   .e 672 to 1092 135 to 555       421/445
(94 %)
6 diff
(98.7 %id)
TI_1948072345   .e 672 to 1113 135 to 576       442/466
(94 %)
6 diff
(98.8 %id)
CV030325 mixed .e 676 to 1184 1 to 509       509/640
(79 %)
1 diff
(99.9 %id)
CU456984 epidermis .e 682 to 1337 21 to 676       656/684
(95 %)
13 diff
(98.1 %id)
TI_1948230714   .e 703 to 1184 592 to 111   fully sequenced,   482/592
(81 %)
0 diff
(100 %id)
BG678175 skin, squamous cell carcinoma .e 720 to 1539 1 to 829       827/969
(85 %)
19 diff
(98.1 %id)
CU445274 epidermis .e 840 to 1576 746 to 10     Submitted on the opposite strand 737/752
(98 %)
4 diff
(99.5 %id)
CU446456 epidermis .e 856 to 1576 730 to 10     Submitted on the opposite strand 721/730
(98 %)
0 diff
(100 %id)
BF912988 uterus_tumor .e 871 to 1159 303 to 14     Submitted on the opposite strand 290/316
(91 %)
5 diff
(98.5 %id)
BF913119 uterus_tumor .e 871 to 1159 303 to 14     Submitted on the opposite strand 290/316
(91 %)
5 diff
(98.5 %id)
CU456542 epidermis .e 912 to 1648 747 to 11     Submitted on the opposite strand 737/747
(98 %)
0 diff
(100 %id)
BX369660   .e 929 to 1833 1 to 901       901/904
(99 %)
17 diff
(98.2 %id)
BX402917   .e 932 to 2015 1073 to 1       1073/1073
(100 %)
14 diff
(98.7 %id)
BF353909 head_neck .e 1000 to 1329 5 to 334       330/334
(98 %)
7 diff
(98.0 %id)
BF353897 head_neck .e 1011 to 1277 1 to 267       267/267
(100 %)
3 diff
(98.9 %id)
BF353901 head_neck .e 1011 to 1341 1 to 331       331/331
(100 %)
2 diff
(99.4 %id)
BF353903 head_neck .e 1011 to 1356 1 to 346       346/346
(100 %)
2 diff
(99.5 %id)
BF353910 head_neck .e 1011 to 1292 1 to 282       282/282
(100 %)
1 diff
(99.7 %id)
BF353912 head_neck .e 1011 to 1334 1 to 324       324/324
(100 %)
7 diff
(97.9 %id)
BF353916 head_neck .e 1011 to 1394 1 to 385       385/385
(100 %)
5 diff
(98.8 %id)
BG675708 skin, squamous cell carcinoma .e 1013 to 1733 1 to 722       722/723
(99 %)
2 diff
(99.8 %id)
AL578102 placenta .e 1074 to 2017 953 to 9       945/953
(99 %)
0 diff
(100 %id)
BI334759 cervical carcinoma cell line, cervix .e 1110 to 1861 1 to 755       755/755
(100 %)
4 diff
(99.5 %id)
BX393202   .e 1145 to 1988 895 to 51       845/927
(91 %)
25 diff
(97.4 %id)
BQ333183 lung_tumor .e 1147 to 1625 496 to 18       479/496
(96 %)
0 diff
(100 %id)
AW796506 uterus .e 1148 to 1508 375 to 14       362/375
(96 %)
0 diff
(100 %id)
TI_149301657   .e 1188 to 2039 950 to 110   AAA   841/918
(91 %)
21 diff
(97.8 %id)
BQ333155 lung_tumor .e 1200 to 1625 426 to 5       422/426
(99 %)
0 diff
(100 %id)
CN261458 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1205 to 1762 1 to 558       558/558
(100 %)
0 diff
(100 %id)
BX425662 neuroblastoma .e 1224 to 2038 816 to 1       816/816
(100 %)
25 diff
(97.0 %id)
AA455558 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1247 to 1440 1 to 193       193/193
(100 %)
5 diff
(97.5 %id)
BQ300917 bladder_tumor .e 1389 to 1505 1 to 116       116/116
(100 %)
2 diff
(98.3 %id)
BQ380652 uterus_tumor .e 1460 to 1802 348 to 6       343/348
(98 %)
0 diff
(100 %id)
BE713183 head_neck .e 1472 to 1844 374 to 1       374/374
(100 %)
4 diff
(99.0 %id)
AI142832 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1478 to 2047 565 to 3       563/571
(98 %)
0 diff
(100 %id)
AW837836 leiomios .e 1490 to 1771 16 to 297       282/306
(92 %)
4 diff
(98.7 %id)
TI_149297973   .e 1495 to 2041 636 to 90   AAA   547/960
(56 %)
2 diff
(99.8 %id)
BM982958 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1495 to 2041 565 to 19   AAA   547/557
(98 %)
2 diff
(99.7 %id)
AI857959 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .e 1497 to 2041 549 to 5       545/549
(99 %)
0 diff
(100 %id)
AI591147 normal gingiva (cell line from primarykeratinocytes) .e 1517 to 2041 542 to 18   AAA   525/525
(100 %)
3 diff
(99.5 %id)
AA939178 pooled germ cell tumors .e 1529 to 2038 509 to 1       509/509
(100 %)
1 diff
(99.9 %id)
BU685217 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1534 to 2039 524 to 19   AAA   506/506
(100 %)
3 diff
(99.5 %id)
AI743474 pooled .e 1539 to 2038 504 to 4       501/504
(99 %)
0 diff
(100 %id)
BE713294 head_neck .e 1550 to 1844 295 to 1       295/295
(100 %)
0 diff
(100 %id)
BE713296 head_neck .e 1550 to 1852 310 to 8       303/310
(97 %)
0 diff
(100 %id)
BE713292 head_neck .e 1555 to 1844 290 to 1       290/290
(100 %)
1 diff
(99.7 %id)
AI139314 uterus .e 1564 to 2041 478 to 1       478/478
(100 %)
0 diff
(100 %id)
AW468680 pooled .e 1621 to 2047 428 to 2       427/428
(99 %)
0 diff
(100 %id)
AA455949 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1660 to 2041 381 to 1       381/381
(100 %)
4 diff
(99.0 %id)
AA875940 2 pooled tumors (clear cell type), Kidney .e 1672 to 2035 363 to 2       362/363
(99 %)
0 diff
(100 %id)
BI255868 cervical carcinoma cell line, cervix .e 1699 to 2041 1 to 343   AAA   343/343
(100 %)
0 diff
(100 %id)
BX090598 heart .e 1706 to 2041 1 to 336   AAA   336/336
(100 %)
0 diff
(100 %id)
AA025073 heart .e 1706 to 2041 1 to 340   fully sequenced,   340/340
(100 %)
5 diff
(98.6 %id)
AI242344 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1739 to 2041 305 to 3       303/305
(99 %)
0 diff
(100 %id)
AA583903 larynx .e 1747 to 2044 298 to 1       298/298
(100 %)
3 diff
(99.0 %id)
AA455950.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 1769 to 2041 272 to 1     also hits gene moylor 272/272
(100 %)
4 diff
(98.6 %id)
AI214745   .e 1827 to 2047 222 to 2       221/222
(99 %)
0 diff
(100 %id)
AA024977 heart .e 1875 to 2042 167 to 1   fully sequenced,   167/167
(100 %)
2 diff
(98.9 %id)
BM910612 astrocytoma grade IV, cell line, brain .f 1 to 914 1 to 915 C50F A189G F191X A192C F193L ... tiling clone,   915/1052
(86 %)
8 diff
(99.3 %id)
BP262871 small intestine .g 1 to 581 1 to 583 E56* tiling clone,   583/583
(100 %)
10 diff
(98.3 %id)
BC027449 Cervix, carcinoma .h 1 to 1787 1 to 1787 exact tiling clone, available from MGC, AAA   1787/1787
(100 %)
0 diff
(100 %id)
BI261038 cervical carcinoma cell line, cervix .h 3 to 816 1 to 811   available from MGC,   811/837
(96 %)
13 diff
(98.5 %id)
BF001207 Prostate .i 1 to 522 5 to 526 exact tiling clone, Submitted on the opposite strand 526/526
(100 %)
0 diff
(100 %id)
DA372274 thalamus .j 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DA394874 thalamus .j 4 to 598 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
AA732569 germinal center B cell .j 368 to 789 1 to 422   tiling clone, Submitted on the opposite strand 422/422
(100 %)
1 diff
(99.8 %id)
BC033292 Skin, squamous cell carcinoma .k 1 to 1884 1 to 1884 exact tiling clone, available from MGC, AAA   1884/1884
(100 %)
0 diff
(100 %id)
BG678409 skin, squamous cell carcinoma .k 1 to 907 1 to 903 T59L V60C P61H Y62T N63T ... available from MGC,   903/940
(96 %)
19 diff
(98.0 %id)
BX432948 neuroblastoma .k 351 to 1232 881 to 4 K2E P13A T16P   Submitted on the opposite strand 878/881
(99 %)
10 diff
(98.9 %id)
CV029830 mixed .k 382 to 824 1 to 443       443/539
(82 %)
2 diff
(99.7 %id)
BF094861 uterus_tumor .l 1 to 423 426 to 4 M5L V12L tiling clone,   423/426
(99 %)
6 diff
(98.6 %id)
AJ431617 cervical tumor .l 375 to 725 1 to 347       347/385
(90 %)
19 diff
(95.1 %id)
TI_1948072018   .l 390 to 792 136 to 538   tiling clone, AAA   403/427
(94 %)
6 diff
(98.6 %id)
BG540216 lung .m-u 1 to 713 1 to 728 exact tiling clone,   728/900
(80 %)
20 diff
(97.8 %id)
BF681342 Prostate .n 1 to 707 1 to 707 exact tiling clone,   707/876
(80 %)
25 diff
(97.2 %id)
AW014380   .n 23 to 529 1 to 507 exact tiling clone, Submitted on the opposite strand 507/507
(100 %)
0 diff
(100 %id)
BP230881 brain .o 1 to 580 1 to 579 D36E G37A R38E R39E S40V ... tiling clone,   579/582
(99 %)
20 diff
(96.6 %id)
CV574608 cornea, eye .p-u 1 to 577 1 to 577 exact tiling clone,   577/577
(100 %)
0 diff
(100 %id)
BX473677   .q 1 to 522 9 to 530 exact tiling clone,   528/530
(99 %)
6 diff
(98.9 %id)
AW007914 thymus, pooled .r 1 to 418 1 to 418 exact tiling clone, Submitted on the opposite strand 418/418
(100 %)
0 diff
(100 %id)
CV357151 stomach .s-u 1 to 120 11 to 129 K2Q F4S E28* tiling clone,   119/130
(91 %)
8 diff
(93.9 %id)
BE085294 breast Gene NCK1andIL20RB, variant not shown         Submitted on the opposite strand    
BF889404 testis_normal Gene NCK1andIL20RB, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
DA159431 amygdala Gene NCK1andIL20RB, variant not shown       capped This clone was ignored    
DC346651.
matches multiple genes
tongue, tumor tissue Gene pladybu, variant not shown         This clone was ignored, also hits gene pladybu    
DC346651.
matches multiple genes
tongue, tumor tissue Gene NCK1andIL20RB, variant not shown         This clone was ignored, also hits gene pladybu    
DC425989.
matches multiple genes
tongue, tumor tissue Gene pladybu, variant not shown         This clone was ignored, also hits gene pladybu    
DC425989.
matches multiple genes
tongue, tumor tissue Gene NCK1andIL20RB, variant not shown         This clone was ignored, also hits gene pladybu    
BJ992214 hepatoblastoma Gene NCK1andIL20RB, variant not shown              
BJ992215 hepatoblastoma Gene NCK1andIL20RB, variant not shown              
BP257159 heart Gene NCK1andIL20RB, variant not shown         Suspected internal deletion, this clone was ignored    
AW613764 2 pooled high-grade transitional celltumors, genitourinary tract Gene NCK1andIL20RB, variant not shown              
CB114539 Liver Gene NCK1andIL20RB, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n, .o, .p-u, .q, .r, .s-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI