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Gene NCF4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
164 supporting clones for gene NCF4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI755764 brain .a 1 to 849 1 to 849   tiling clone,   849/849
(100 %)
1 diff
(99.9 %id)
TI_57217192   .a 1 to 849 35 to 883       849/883
(96 %)
7 diff
(99.3 %id)
BC002798 Lymph, Burkitt lymphoma .a 19 to 1659 1 to 1641 L272P tiling clone, available from MGC, AAA   1641/1641
(100 %)
3 diff
(99.9 %id)
NM_013416.3   .a 19 to 1664 1 to 1646 exact RefSeq,   1646/1646
(100 %)
3 diff
(99.9 %id)
BQ073024 leukocyte .a 23 to 970 1 to 970       970/1065
(91 %)
47 diff
(95.6 %id)
BM466249 embryonal carcinoma, cell line, testis .a 24 to 830 1 to 814       814/1186
(68 %)
21 diff
(98.3 %id)
TI_57164871   .a 29 to 804 25 to 808       782/808
(96 %)
20 diff
(97.6 %id)
BG503318 embryonal carcinoma, testis .a 33 to 708 1 to 675       675/675
(100 %)
10 diff
(98.6 %id)
BG614157 embryonal carcinoma, testis .a 33 to 788 1 to 765       765/766
(99 %)
24 diff
(96.9 %id)
BX480406   .a 36 to 499 1 to 464       464/464
(100 %)
2 diff
(99.6 %id)
BI835945 pooled pancreas and spleen .a 36 to 804 1 to 777       775/777
(99 %)
15 diff
(98.1 %id)
BI906110 leukocyte .a 40 to 838 1 to 805       766/878
(87 %)
26 diff
(97.1 %id)
TI_57231573   .a 40 to 838 34 to 838       766/911
(84 %)
32 diff
(96.5 %id)
BE513780 Burkitt lymphoma, lymph .a 46 to 672 1 to 625       625/675
(92 %)
4 diff
(99.5 %id)
CD609269   .a 47 to 408 8 to 369       362/370
(97 %)
7 diff
(98.2 %id)
CD609270   .a 47 to 408 359 to 1       359/366
(98 %)
7 diff
(98.1 %id)
BI521086 pooled pancreas and spleen .a 47 to 822 1 to 777       777/777
(100 %)
3 diff
(99.7 %id)
TI_57184075   .a 47 to 527 31 to 514       484/517
(93 %)
13 diff
(97.5 %id)
TI_57163174   .a 47 to 800 29 to 782       754/782
(96 %)
7 diff
(99.2 %id)
BX349544 Placenta Cot 25-normalized .a 49 to 933 1 to 892       892/892
(100 %)
16 diff
(98.3 %id)
BX371614 Placenta Cot 25-normalized .a 49 to 660 611 to 1       611/611
(100 %)
1 diff
(99.9 %id)
BI832805 pooled pancreas and spleen .a 49 to 961 1 to 914       914/951
(96 %)
12 diff
(98.8 %id)
TI_57162470   .a 49 to 961 35 to 948       914/985
(92 %)
18 diff
(98.2 %id)
BI770711 pooled lung and spleen .a 50 to 527 1 to 481       481/484
(99 %)
7 diff
(98.6 %id)
BI837822 pooled pancreas and spleen .a 50 to 800 1 to 751       751/751
(100 %)
2 diff
(99.8 %id)
BI909237 leukocyte .a 51 to 893 1 to 857       854/858
(99 %)
26 diff
(97.0 %id)
BI521304 pooled pancreas and spleen .a 51 to 618 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
BM919215 pooled pancreas and spleen .a 51 to 985 1 to 938       938/1080
(86 %)
20 diff
(98.2 %id)
TI_57237453   .a 51 to 893 97 to 953       854/954
(89 %)
31 diff
(96.8 %id)
BI918063 brain .a 53 to 732 1 to 689       687/883
(77 %)
18 diff
(98.0 %id)
TI_57242664   .a 53 to 732 36 to 724       687/918
(74 %)
20 diff
(97.9 %id)
CD609265   .a 56 to 408 353 to 1       353/353
(100 %)
5 diff
(98.6 %id)
CD609266   .a 56 to 408 1 to 353       353/354
(99 %)
4 diff
(98.9 %id)
BM919780 pooled pancreas and spleen .a 56 to 720 11 to 681       671/1154
(58 %)
12 diff
(99.0 %id)
TI_57202953   .a 58 to 909 65 to 918       854/922
(92 %)
10 diff
(99.0 %id)
CD609267   .a 59 to 408 1 to 357       357/358
(99 %)
10 diff
(97.3 %id)
CD609268   .a 59 to 408 356 to 1       356/356
(100 %)
12 diff
(96.7 %id)
BQ706513 Spleen .a 59 to 913 1 to 860       860/932
(92 %)
18 diff
(98.1 %id)
DN998405 bone marrow .a 59 to 785 1 to 723       723/723
(100 %)
12 diff
(98.4 %id)
TI_151772271   .a 60 to 732 104 to 774       671/1083
(61 %)
20 diff
(98.2 %id)
BI819859 pooled brain, lung, testis .a 61 to 909 1 to 851       851/855
(99 %)
6 diff
(99.3 %id)
BI834138 pooled pancreas and spleen .a 65 to 969 1 to 905       905/916
(98 %)
16 diff
(98.3 %id)
TI_57164468   .a 65 to 969 63 to 967       905/978
(92 %)
27 diff
(97.3 %id)
BI835122 pooled pancreas and spleen .a 67 to 764 1 to 698       698/698
(100 %)
1 diff
(99.9 %id)
BQ072923 leukocyte .a 67 to 961 19 to 914       896/1044
(85 %)
10 diff
(99.1 %id)
TI_57166296   .a 67 to 764 29 to 726       698/726
(96 %)
6 diff
(99.2 %id)
BG545408 lung .a 69 to 297 1 to 229       229/230
(99 %)
4 diff
(98.3 %id)
BM906884 brain, hippocampus .a 69 to 828 14 to 772       759/1171
(64 %)
17 diff
(98.6 %id)
BM171951 lung .a 70 to 646 1 to 581       581/581
(100 %)
23 diff
(96.1 %id)
BI911965 leukocyte .a 71 to 722 36 to 691       656/691
(94 %)
13 diff
(98.2 %id)
TI_57234206   .a 71 to 722 36 to 691       656/691
(94 %)
13 diff
(98.2 %id)
BU929769 placenta .a 79 to 830 1 to 757       757/795
(95 %)
9 diff
(98.9 %id)
DN998639 bone marrow .a 81 to 789 36 to 744       709/744
(95 %)
5 diff
(99.4 %id)
BQ708648 Spleen .a 83 to 961 27 to 907       881/953
(92 %)
22 diff
(97.7 %id)
CD689455 normal nasopharynx .a 88 to 573 26 to 514       489/514
(95 %)
7 diff
(98.7 %id)
BX443144 B cells (Ramos cell line) .a 90 to 1151 1 to 1062       1062/1062
(100 %)
9 diff
(99.2 %id)
BX446254 B cells (Ramos cell line) .a 90 to 1036 1 to 947       947/947
(100 %)
3 diff
(99.7 %id)
BX446255 B cells (Ramos cell line) .a 90 to 658 1 to 569       569/569
(100 %)
23 diff
(96.0 %id)
BX465113 B cells (Ramos cell line) .a 92 to 954 1 to 862       862/862
(100 %)
2 diff
(99.8 %id)
BX465114 B cells (Ramos cell line) .a 92 to 607 1 to 516       516/551
(93 %)
16 diff
(97.1 %id)
AK290924   .a 97 to 1600 1 to 1504 exact tiling clone,   1504/1504
(100 %)
0 diff
(100 %id)
DA676669   .a 98 to 667 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BI837038 pooled pancreas and spleen .a 108 to 912 1 to 806       806/807
(99 %)
3 diff
(99.7 %id)
TI_57164069   .a 108 to 912 104 to 909       806/910
(88 %)
9 diff
(99.1 %id)
AB025219   .a 167 to 1467 1 to 1301 L272P     1301/1301
(100 %)
1 diff
(100.0 %id)
BT007346   .a 203 to 1247 1 to 1045       1045/1047
(99 %)
2 diff
(99.9 %id)
EL733246 mixed .a 203 to 571 1 to 369       369/369
(100 %)
0 diff
(100 %id)
BQ695254 adipose .a 234 to 473 1 to 240       240/246
(97 %)
2 diff
(99.2 %id)
CD609263   .a 295 to 408 5 to 118       114/119
(95 %)
7 diff
(94.2 %id)
CD609264   .a 295 to 408 114 to 1       114/118
(96 %)
2 diff
(98.4 %id)
BX371615 Placenta Cot 25-normalized .a 314 to 672 354 to 1       354/432
(81 %)
14 diff
(96.8 %id)
CD517260 White Matter .a 316 to 1022 83 to 799       717/1015
(70 %)
28 diff
(97.3 %id)
AV743206 cord Blood .a 325 to 830 20 to 527       508/616
(82 %)
32 diff
(94.9 %id)
BX335493 Placenta Cot 25-normalized .a 476 to 1630 1149 to 1       1149/1149
(100 %)
17 diff
(98.6 %id)
BX443143 B cells (Ramos cell line) .a 568 to 1609 1049 to 9       1041/1058
(98 %)
16 diff
(98.5 %id)
TI_57164479   .a 601 to 1132 21 to 576       556/932
(59 %)
40 diff
(95.8 %id)
BI834149 pooled pancreas and spleen .a 610 to 1132 1 to 547       547/903
(60 %)
35 diff
(96.2 %id)
BX446253 B cells (Ramos cell line) .a 673 to 1631 955 to 1       955/955
(100 %)
5 diff
(99.5 %id)
BQ335730 marrow .a 717 to 991 277 to 4       274/277
(98 %)
0 diff
(100 %id)
W95229.
matches multiple genes
heart .a 905 to 1181 1 to 277     also hits gene CTSG 277/277
(100 %)
3 diff
(99.0 %id)
BI522117 pooled pancreas and spleen .a 962 to 1584 672 to 32       641/674
(95 %)
11 diff
(98.4 %id)
BP430157   .a 1002 to 1370 1 to 369       369/369
(100 %)
5 diff
(98.7 %id)
BX392499 Placenta Cot 25-normalized .a 1007 to 1655 642 to 1       642/767
(83 %)
29 diff
(96.3 %id)
BM998289 lung, Metastatic Chondrosarcoma .a 1009 to 1652 661 to 19   AAA   643/643
(100 %)
5 diff
(99.3 %id)
CD369152 Alveolar Macrophage, lung .a 1009 to 1658 668 to 19   AAA   650/650
(100 %)
1 diff
(99.9 %id)
BX328574 Placenta Cot 25-normalized .a 1058 to 1646 591 to 1       591/919
(64 %)
18 diff
(98.1 %id)
BI522010 pooled pancreas and spleen .a 1110 to 1588 520 to 21       500/1011
(49 %)
15 diff
(98.6 %id)
TI_154124458   .a 1130 to 1659 631 to 103   AAA   529/929
(56 %)
8 diff
(99.2 %id)
CA419104 Chondrosarcoma Grade II, Left Pelvis .a 1164 to 1659 514 to 19   AAA   496/496
(100 %)
0 diff
(100 %id)
AW264643 lung, two pooled squamous cell carcinomas .a 1188 to 1405 217 to 1       217/217
(100 %)
4 diff
(98.2 %id)
AA648472 germinal center B cell .a 1198 to 1659 513 to 54   AAA   460/482
(95 %)
8 diff
(98.4 %id)
AA948430 adenocarcinoma, colon .a 1201 to 1659 483 to 25   AAA   459/459
(100 %)
0 diff
(100 %id)
AI435296 B-cell, chronic lymphotic leukemia .a 1201 to 1658 478 to 21   AAA   458/458
(100 %)
5 diff
(99.0 %id)
BI027264 marrow .a 1205 to 1357 1 to 152       152/152
(100 %)
6 diff
(96.1 %id)
BI020055 marrow .a 1206 to 1365 166 to 10       157/167
(94 %)
2 diff
(98.9 %id)
AA702857 liver and spleen .a 1206 to 1660 455 to 1       455/455
(100 %)
6 diff
(98.7 %id)
AA969460 2 pooled tumors (clear cell type), Kidney .a 1211 to 1659 470 to 25   AAA   446/448
(99 %)
15 diff
(96.7 %id)
DB519732 testis .a 1212 to 1659 1 to 448     Submitted on the opposite strand 448/448
(100 %)
0 diff
(100 %id)
AI299103 carcinoid, lung .a 1220 to 1658 445 to 8       438/447
(97 %)
2 diff
(99.6 %id)
AA714514 germinal center B-cells, tonsil .a 1236 to 1655 425 to 6       420/425
(98 %)
1 diff
(99.8 %id)
AA909156 pooled .a 1246 to 1660 417 to 1       415/417
(99 %)
5 diff
(98.9 %id)
AI088359 uterus .a 1246 to 1659 426 to 13   AAA   414/414
(100 %)
0 diff
(100 %id)
AA688071 germinal center B cell .a 1261 to 1660 425 to 28   AAA   398/398
(100 %)
2 diff
(99.5 %id)
AV742925 cord Blood .a 1269 to 1658 39 to 426   AAA   388/426
(91 %)
6 diff
(98.6 %id)
AV736253 cord Blood .a 1269 to 1657 39 to 426   AAA   388/426
(91 %)
6 diff
(98.6 %id)
AI439568 B-cell, chronic lymphotic leukemia .a 1269 to 1659 401 to 12   AAA   390/446
(87 %)
26 diff
(94.2 %id)
AW512532 lymph node, lymphoma, follicular mixed small and largecell .a 1270 to 1658 405 to 18   AAA   388/433
(89 %)
4 diff
(99.1 %id)
AI160716 brain, glioblastoma (pooled) .a 1275 to 1652 378 to 1       378/378
(100 %)
0 diff
(100 %id)
AI359383 brain, glioblastoma (pooled) .a 1275 to 1652 378 to 1       378/378
(100 %)
0 diff
(100 %id)
BE856411 brain, glioblastoma (pooled) .a 1275 to 1652 378 to 1       378/378
(100 %)
0 diff
(100 %id)
W92604.
matches multiple genes
heart .a 1277 to 1658 383 to 1     also hits gene BTBD3 383/384
(99 %)
1 diff
(99.8 %id)
D20144   .a 1324 to 1661 1 to 338     Submitted on the opposite strand 338/340
(99 %)
1 diff
(99.8 %id)
CA436226 lung, Metastatic Chondrosarcoma .a 1328 to 1659 350 to 19   AAA   332/332
(100 %)
0 diff
(100 %id)
AW071426 bone marrow, stem cell 34+/38+ .a 1429 to 1651 1 to 222   AAA Submitted on the opposite strand 222/222
(100 %)
8 diff
(96.4 %id)
AW075142 bone marrow, stem cell 34+/38+ .a 1429 to 1658 1 to 229   AAA Submitted on the opposite strand 229/229
(100 %)
6 diff
(97.4 %id)
AA034506 uterus .a 1447 to 1654 209 to 1       209/209
(100 %)
4 diff
(98.1 %id)
NM_000631.4   .b 1 to 1401 1 to 1401 exact RefSeq,   1401/1401
(100 %)
3 diff
(99.8 %id)
BX396110 Placenta Cot 25-normalized .b 6 to 743 1 to 750   fully sequenced,   750/750
(100 %)
19 diff
(97.5 %id)
CR616659 Placenta Cot 25-normalized .b 7 to 1359 1 to 1353 exact tiling clone,   1353/1353
(100 %)
0 diff
(100 %id)
CR595164 Placenta Cot 25-normalized .b 25 to 1363 1 to 1339 exact     1339/1339
(100 %)
0 diff
(100 %id)
BX355636 Placenta Cot 25-normalized .b 25 to 743 1 to 719   fully sequenced,   719/719
(100 %)
0 diff
(100 %id)
AK223324 thymus .b 30 to 1396 1 to 1367 D330G tiling clone, AAA   1367/1367
(100 %)
1 diff
(100.0 %id)
BM716356 eye, RPE and Choroid .b 43 to 474 1 to 433       433/433
(100 %)
2 diff
(99.6 %id)
CR595418 B cells (Ramos cell line) .b 74 to 1398 1 to 1325 exact     1325/1325
(100 %)
0 diff
(100 %id)
BX462141 B cells (Ramos cell line) .b 74 to 1008 1 to 928       928/928
(100 %)
17 diff
(98.2 %id)
CR456528   .b 104 to 1309 1 to 1206 exact     1206/1206
(100 %)
0 diff
(100 %id)
X77094   .b 126 to 1299 72 to 1245 L147I     1174/1245
(94 %)
8 diff
(99.4 %id)
AB025220   .b 149 to 1204 1 to 1056 exact     1056/1056
(100 %)
0 diff
(100 %id)
CU013416 Synthetic constructs .b 181 to 1207 16 to 1042 exact     1027/1051
(97 %)
10 diff
(99.1 %id)
CU013128 Synthetic constructs .b 181 to 1204 16 to 1039 exact     1024/1054
(97 %)
7 diff
(99.4 %id)
CR542078   .b 185 to 1204 1 to 1020 Q66R     1020/1020
(100 %)
2 diff
(99.9 %id)
BX462140 B cells (Ramos cell line) .b 293 to 1374 1072 to 1       1072/1072
(100 %)
39 diff
(96.4 %id)
BX465112 B cells (Ramos cell line) .b 457 to 1370 903 to 1       903/909
(99 %)
15 diff
(98.4 %id)
TI_57182887   .b 464 to 1100 23 to 658       636/658
(96 %)
7 diff
(99.0 %id)
BI771497 pooled lung and spleen .b 473 to 1100 1 to 627       627/627
(100 %)
1 diff
(99.9 %id)
BG398359 B-cells, primary B-cells from tonsils (cell line) .b 478 to 1376 1 to 896       896/1005
(89 %)
46 diff
(95.5 %id)
CA308004 Alveolar Macrophage, lung .b 634 to 1396 781 to 19   AAA   763/763
(100 %)
1 diff
(99.9 %id)
AW968383   .b 657 to 1211 32 to 586       555/586
(94 %)
8 diff
(98.7 %id)
CR736321 germinal center B cell .b 661 to 1396 1 to 737   AAA   737/737
(100 %)
1 diff
(99.9 %id)
TI_57232065   .b 663 to 1340 30 to 712       683/919
(74 %)
18 diff
(98.1 %id)
BI905927 leukocyte .b 664 to 1340 1 to 682       682/889
(76 %)
12 diff
(98.7 %id)
BM457144 embryonal carcinoma, cell line, testis .b 674 to 1396 1 to 723   AAA   723/723
(100 %)
0 diff
(100 %id)
BX355635 Placenta Cot 25-normalized .b 682 to 1363 683 to 1   fully sequenced,   683/683
(100 %)
2 diff
(99.8 %id)
BX396109 Placenta Cot 25-normalized .b 682 to 1359 676 to 1   fully sequenced,   676/676
(100 %)
11 diff
(98.4 %id)
BE831046 marrow .b 711 to 1199 29 to 519       491/524
(93 %)
18 diff
(96.6 %id)
BX428503 B cells (Ramos cell line) .b 712 to 1398 1 to 688       688/688
(100 %)
4 diff
(99.5 %id)
BQ005503 Chondrosarcoma, Left Pelvis .b 759 to 1396 655 to 19   AAA   637/637
(100 %)
3 diff
(99.6 %id)
BM707869 eye, RPE and Choroid .b 805 to 1396 1 to 592   fully sequenced,   592/592
(100 %)
0 diff
(100 %id)
AI598149 anaplastic oligodendroglioma, brain .b 810 to 1389 577 to 1       577/605
(95 %)
12 diff
(98.1 %id)
AA485518 ovarian tumor, ovary .b 813 to 1301 1 to 490       490/490
(100 %)
1 diff
(99.8 %id)
BU734303 eye, RPE and Choroid .b 814 to 1389 593 to 19   AAA   575/575
(100 %)
1 diff
(99.9 %id)
AA975113 leiomyosarcoma, soft tissue .b 841 to 1394 547 to 1       547/551
(99 %)
14 diff
(97.5 %id)
BF194742 fibrotheoma, ovary .b 857 to 1395 539 to 1       539/539
(100 %)
2 diff
(99.7 %id)
AI809837 B-cell, chronic lymphotic leukemia .b 866 to 1392 531 to 5       527/531
(99 %)
0 diff
(100 %id)
AI381940 pooled .b 890 to 1396 507 to 1       507/507
(100 %)
2 diff
(99.7 %id)
AA744805 germinal center B cell .b 905 to 1396 501 to 10       492/501
(98 %)
3 diff
(99.5 %id)
CA748910 Bone, Subchondral Bone .b 915 to 1389 493 to 19   AAA   475/475
(100 %)
0 diff
(100 %id)
TI_227715501   .b 933 to 1396 559 to 96   AAA   464/990
(46 %)
0 diff
(100 %id)
CD366633 Alveolar Macrophage, lung .b 933 to 1396 482 to 19   AAA   464/473
(98 %)
0 diff
(100 %id)
BU732957 eye, RPE and Choroid .b 1175 to 1395 240 to 20   fully sequenced, AAA   221/221
(100 %)
0 diff
(100 %id)
BG675250 skin .c 1 to 796 1 to 797 G4E D5T L6G G7F S8N ... tiling clone,   797/797
(100 %)
24 diff
(97.0 %id)
AA465462 germinal center B cell .d 1 to 299 1 to 299   tiling clone, fully sequenced,   299/299
(100 %)
8 diff
(97.4 %id)
AA465389 germinal center B cell .d 269 to 705 441 to 3   tiling clone, fully sequenced,   439/441
(99 %)
1 diff
(99.8 %id)
BM456786 embryonal carcinoma, cell line, testis .e 1 to 827 1 to 844 A112S T113H I115A F116S P117S ... tiling clone,   844/1096
(77 %)
24 diff
(97.9 %id)
TI_57178796   .f-u 1 to 702 25 to 729 exact tiling clone,   705/730
(96 %)
7 diff
(99.1 %id)
BI767119 pooled lung and spleen .f-u 4 to 702 1 to 702 exact tiling clone,   702/703
(99 %)
5 diff
(99.3 %id)
BX644632   .f-u 43 to 259 1 to 217       217/217
(100 %)
17 diff
(92.2 %id)
BI049959 placenta_normal .f-u 78 to 376 299 to 2   tiling clone,   298/302
(98 %)
0 diff
(100 %id)
CB991574 placenta, pre-eclamptic placenta .g 1 to 498 28 to 531 H4R tiling clone,   504/979
(51 %)
18 diff
(98.2 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI