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Gene NLRP4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
44 supporting clones for gene NLRP4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK315003 testis .a 1 to 3407 1 to 3407 A144T F655L Q925L tiling clone, 3407/3407
(100 %)
7 diff
(99.8 %id)
NM_134444.4   .a 1 to 3672 1 to 3672 exact RefSeq, AAA 3672/3672
(100 %)
0 diff
(100 %id)
DC400045 testis .a 1 to 572 1 to 572     572/572
(100 %)
0 diff
(100 %id)
DB063483 testis .a 12 to 553 2 to 543   capped 542/542
(100 %)
0 diff
(100 %id)
DB093131 testis .a 25 to 582 2 to 559   capped 558/558
(100 %)
0 diff
(100 %id)
DB100296 testis .a 290 to 865 2 to 577   capped 576/576
(100 %)
0 diff
(100 %id)
DB082405 testis .a 293 to 857 2 to 566   capped 565/565
(100 %)
1 diff
(99.9 %id)
DB071909 testis .a 319 to 869 2 to 552   capped 551/551
(100 %)
1 diff
(99.9 %id)
DB074956 testis .a 319 to 874 2 to 557   capped 556/556
(100 %)
0 diff
(100 %id)
DB086527 testis .a 319 to 889 2 to 572   capped 571/571
(100 %)
0 diff
(100 %id)
BG772562 testis .a 322 to 1049 1 to 725     725/725
(100 %)
10 diff
(98.7 %id)
BC050326 testis .a 327 to 3670 1 to 3344 E383D P390Q L774M Q925L tiling clone, available from MGC, AAA 3344/3344
(100 %)
8 diff
(99.8 %id)
DB448886 testis .a 327 to 765 1 to 439     439/439
(100 %)
1 diff
(99.8 %id)
DB086116 testis .a 341 to 907 2 to 568   capped 567/567
(100 %)
0 diff
(100 %id)
AF482706   .a 356 to 3589 1 to 3234 Q41*   3234/3234
(100 %)
20 diff
(99.4 %id)
BG481869 choriocarcinoma, placenta .a 362 to 1094 1 to 731     731/735
(99 %)
13 diff
(98.3 %id)
AF479747   .a 363 to 3672 10 to 3319 A144T tiling clone, AAA 3310/3310
(100 %)
5 diff
(99.9 %id)
AY072792   .a 363 to 3672 1 to 3310 A144T AAA 3310/3310
(100 %)
5 diff
(99.9 %id)
BC012789 Placenta, choriocarcinoma .a 363 to 3672 1 to 3311 A50S S51I R52P E53G E54R ... available from MGC, AAA 3311/3311
(100 %)
6 diff
(99.9 %id)
BC021272 Placenta, choriocarcinoma .a 363 to 3672 1 to 3311 A50S S51I R52P E53G E54R ... available from MGC, AAA 3311/3311
(100 %)
6 diff
(99.9 %id)
BG774670 choriocarcinoma, placenta .a 365 to 1134 3 to 762   available from MGC, 760/765
(99 %)
19 diff
(97.6 %id)
AF442488   .a 366 to 3672 1 to 3307 A144T AAA 3307/3307
(100 %)
5 diff
(99.9 %id)
BE903237 choriocarcinoma, placenta .a 373 to 1004 70 to 698   available from MGC, 629/698
(90 %)
14 diff
(98.0 %id)
BE278926 choriocarcinoma, placenta .a 382 to 961 1 to 581     581/581
(100 %)
3 diff
(99.5 %id)
BE278595 choriocarcinoma, placenta .a 382 to 1057 1 to 673     673/682
(98 %)
9 diff
(98.7 %id)
BE902227 choriocarcinoma, placenta .a 385 to 1150 1 to 763     763/993
(76 %)
20 diff
(98.0 %id)
BE535932 cervix .a 1747 to 2440 1 to 691   available from MGC, 691/813
(84 %)
10 diff
(98.8 %id)
BM457898 lymph, lymphoma, cell line .a 2105 to 2984 13 to 890     877/890
(98 %)
10 diff
(98.9 %id)
BG341650 B-cells, primary B-cells from tonsils (cell line) .a 2138 to 2332 1 to 195     195/195
(100 %)
1 diff
(99.5 %id)
BU632773 cell lines, Chondrosarcoma .a 3002 to 3672 689 to 19   tiling clone, AAA 671/671
(100 %)
1 diff
(99.9 %id)
AI204456   .a 3179 to 3666 488 to 1     488/488
(100 %)
3 diff
(99.4 %id)
AA833751 germinal center B cell .a 3287 to 3672 421 to 36   AAA 386/390
(98 %)
2 diff
(99.5 %id)
AI825059 pooled germ cell tumors .a 3399 to 3667 270 to 1     270/270
(100 %)
2 diff
(99.3 %id)
AK056688   .b 1 to 3189 2 to 3190 A69T tiling clone, available from FLJ, 3190/3190
(100 %)
8 diff
(99.8 %id)
DA813186   .b 1 to 541 2 to 542   capped 541/541
(100 %)
5 diff
(99.1 %id)
BG106796 lymph, lymphoma, cell line .b 30 to 687 1 to 655     655/922
(71 %)
27 diff
(97.1 %id)
CF138560 lymph .b 66 to 303 7 to 244     238/244
(97 %)
0 diff
(100 %id)
TI_154168590   .b 66 to 564 79 to 567   tiling clone, 489/489
(100 %)
19 diff
(96.2 %id)
DB327592   .b 2651 to 3189 539 to 1     539/539
(100 %)
2 diff
(99.7 %id)
BE018433 cervix .c 1 to 506 1 to 506   tiling clone, 506/506
(100 %)
0 diff
(100 %id)
BC016443 Placenta, choriocarcinoma .c 253 to 2022 1 to 1770   tiling clone, available from MGC, AAA 1770/1770
(100 %)
3 diff
(99.9 %id)
BE302040 cervix .c 1485 to 2025 544 to 4   tiling clone, 541/544
(99 %)
1 diff
(99.9 %id)
AA421452   .d 1 to 424 1 to 424     424/424
(100 %)
2 diff
(99.6 %id)
BX091036   .d 2 to 610 1 to 609   tiling clone, 609/609
(100 %)
2 diff
(99.7 %id)
AA421483   .d 424 to 784 361 to 1   tiling clone, 361/361
(100 %)
2 diff
(99.5 %id)
DB039223 testis .e 1 to 587 2 to 588   tiling clone, capped 587/587
(100 %)
3 diff
(99.5 %id)
BP224825   Gene NLRP4, variant not shown            
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI