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Gene NLRP2andRPL36AP50TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
299 supporting clones for gene NLRP2andRPL36AP50 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_017852.3   .a -10 to 3562 1 to 3573 exact RefSeq, AAA   3573/3573
(100 %)
0 diff
(100 %id)
DB066882 testis .a -10 to 571 2 to 585   capped   584/584
(100 %)
3 diff
(99.5 %id)
DB046128 testis .a -9 to 561 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA195518 amygdala .a 1 to 558 6 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DB078692 testis .a 1 to 554 5 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB093990 testis .a 1 to 542 5 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB086977 testis .a 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DB095311 testis .a 21 to 577 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA727024   .a 22 to 590 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA760401   .a 22 to 575 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DA834553 placenta .a 22 to 798 2 to 779   capped   778/778
(100 %)
11 diff
(98.6 %id)
DB019729 testis .a 22 to 594 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB081445 testis .a 22 to 565 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DB082687 testis .a 22 to 576 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB086512 testis .a 22 to 583 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB099692 testis .a 22 to 580 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB101379 thymus .a 22 to 584 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB074244 testis .a 32 to 560 10 to 539   capped   530/530
(100 %)
1 diff
(99.9 %id)
DA190508 amygdala .a 40 to 630 2 to 592   capped   591/591
(100 %)
2 diff
(99.7 %id)
DA191163 amygdala .a 43 to 613 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA192749 amygdala .a 43 to 630 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA854507 placenta .a 43 to 617 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
AF310106   .a 45 to 3557 1 to 3513 exact tiling clone, AAA   3513/3513
(100 %)
5 diff
(99.9 %id)
AK000517   .a 45 to 3557 1 to 3513 exact available from FLJ, AAA   3513/3513
(100 %)
5 diff
(99.9 %id)
DA396987 thalamus .a 45 to 632 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DB159671 thymus .a 45 to 637 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
DA166456 amygdala .a 51 to 615 2 to 569   capped   568/568
(100 %)
5 diff
(99.2 %id)
DA329796 hippocampus .a 51 to 613 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA496874 brain .a 51 to 624 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA727162   .a 51 to 619 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA855990 placenta .a 51 to 634 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DB080515 testis .a 51 to 612 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB093162 testis .a 51 to 606 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB096860 testis .a 51 to 584 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB146275 thymus .a 51 to 619 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB157066 thymus .a 51 to 580 2 to 528   capped   527/527
(100 %)
4 diff
(99.3 %id)
DB220847 trachea .a 51 to 594 2 to 547   capped   546/555
(98 %)
5 diff
(99.1 %id)
DA698100   .a 52 to 600 2 to 550   capped   549/549
(100 %)
3 diff
(99.5 %id)
DA311730 hippocampus .a 53 to 566 2 to 516   capped   515/515
(100 %)
2 diff
(99.7 %id)
DA021479   .a 54 to 622 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA025720   .a 54 to 605 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA395211 thalamus .a 54 to 640 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA722580   .a 54 to 619 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA724997   .a 54 to 612 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA743248   .a 54 to 573 2 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
DA756114   .a 54 to 627 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA850888 placenta .a 54 to 582 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
DA852909 placenta .a 54 to 617 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA863798 placenta .a 54 to 629 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DA876355 Prostate .a 54 to 580 2 to 528   capped   527/527
(100 %)
2 diff
(99.7 %id)
DB063543 testis .a 54 to 600 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DB089751 testis .a 54 to 623 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DB165440 thymus .a 54 to 642 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DB213308 trachea .a 54 to 603 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB222145 trachea .a 54 to 626 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB233925 trachea .a 54 to 645 2 to 593   capped   592/594
(99 %)
2 diff
(99.7 %id)
DB061861 testis .a 60 to 619 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DB039906 testis .a 61 to 629 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB092380 testis .a 61 to 620 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
BG482223 choriocarcinoma, placenta .a 63 to 839 1 to 785       785/786
(99 %)
24 diff
(97.0 %id)
DB067133 testis .a 63 to 598 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BC003592 Lung, small cell carcinoma .a 66 to 3562 1 to 3497 exact available from MGC, AAA   3497/3497
(100 %)
7 diff
(99.8 %id)
DA412352 thalamus .a 70 to 579 57 to 568   capped   512/567
(90 %)
9 diff
(98.5 %id)
DR001538 fetal brain .a 70 to 816 9 to 753       745/753
(98 %)
4 diff
(99.5 %id)
AW250103 lung, small cell carcinoma .a 71 to 632 15 to 576       562/576
(97 %)
7 diff
(98.8 %id)
DB068431 testis .a 73 to 605 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
AK025952   .a 81 to 3562 1 to 3482 I304S tiling clone, available from FLJ, AAA   3482/3482
(100 %)
7 diff
(99.8 %id)
AK223253 stomach mucosa .a 81 to 3469 1 to 3389 W175C     3389/3389
(100 %)
3 diff
(100.0 %id)
AK223269 stomach mucosa .a 81 to 3557 1 to 3477 W175C AAA   3477/3477
(100 %)
3 diff
(100.0 %id)
BP253694 Kidney .a 81 to 662 1 to 582       582/583
(99 %)
3 diff
(99.5 %id)
BP312606 mammary gland .a 81 to 662 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
BP314397 mammary gland .a 81 to 663 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP342530 stomach mucosa .a 81 to 660 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
BP343232 stomach mucosa .a 81 to 660 1 to 580       580/580
(100 %)
3 diff
(99.5 %id)
DA195475 amygdala .a 82 to 647 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA644324   .a 82 to 654 2 to 575   capped   574/574
(100 %)
4 diff
(99.4 %id)
DA687292   .a 82 to 623 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA742219   .a 82 to 636 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA808541 brain .a 82 to 636 2 to 557   capped   556/556
(100 %)
3 diff
(99.5 %id)
DA818726   .a 82 to 634 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA834716 placenta .a 82 to 629 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA856444 placenta .a 82 to 655 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA856771 placenta .a 82 to 635 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA857007 placenta .a 82 to 622 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
DA858313 placenta .a 82 to 715 2 to 636   capped   635/636
(99 %)
3 diff
(99.6 %id)
DA859110 placenta .a 82 to 655 2 to 575   capped   574/575
(99 %)
4 diff
(99.4 %id)
DA861770 placenta .a 82 to 640 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
DA864657 placenta .a 82 to 628 2 to 550   capped   549/549
(100 %)
4 diff
(99.3 %id)
DA990765 synovial membrane tissue from rheumatioidarthritis .a 82 to 615 2 to 536   capped   535/535
(100 %)
2 diff
(99.7 %id)
DB019757 testis .a 82 to 650 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB047724 testis .a 82 to 635 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB062269 testis .a 82 to 610 2 to 531   capped   530/530
(100 %)
2 diff
(99.7 %id)
DB066006 testis .a 82 to 626 2 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
DB070885 testis .a 82 to 629 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DB077590 testis .a 82 to 644 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB086161 testis .a 82 to 639 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
BE793762 lung, small cell carcinoma .a 84 to 884 1 to 789       789/965
(81 %)
25 diff
(97.5 %id)
AF464764   .a 90 to 3557 1 to 3468 exact tiling clone, AAA   3468/3468
(100 %)
1 diff
(100.0 %id)
CN427440 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 94 to 537 1 to 444       444/444
(100 %)
4 diff
(99.1 %id)
BM473813 melanotic melanoma, skin .a 96 to 1067 1 to 976       976/1121
(87 %)
17 diff
(98.5 %id)
BE731051 choriocarcinoma, placenta .a 98 to 695 1 to 599       599/599
(100 %)
3 diff
(99.5 %id)
CN427445 embryonic stem cells, cell lines H1, H7, andH9 .a 104 to 759 1 to 656       656/656
(100 %)
1 diff
(99.9 %id)
BC001039 Placenta, choriocarcinoma .a 110 to 3555 1 to 3446 A1052E available from MGC, AAA   3446/3446
(100 %)
5 diff
(99.9 %id)
AL544013 placenta, Placenta Cot 25-normalized .a 113 to 1001 1 to 889       889/889
(100 %)
1 diff
(99.9 %id)
AL570262 placenta, Placenta Cot 25-normalized .a 2580 to 3542 963 to 1       963/963
(100 %)
5 diff
(99.5 %id)
DB328097 placenta .a 3006 to 3557 554 to 1       554/583
(95 %)
26 diff
(95.6 %id)
AW250856 lung, small cell carcinoma .a 3060 to 3562 513 to 11   AAA   503/503
(100 %)
1 diff
(99.9 %id)
DA739916   .b 1 to 541 8 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
NM_001174081.1   .b 1 to 3540 3 to 3542 exact RefSeq, AAA   3542/3542
(100 %)
0 diff
(100 %id)
DA856428 placenta .b 1 to 564 3 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA856893 placenta .b 1 to 563 3 to 565   tiling clone, capped   564/564
(100 %)
2 diff
(99.7 %id)
DA851316 placenta .b 1 to 563 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB444948 testis .b 18 to 448 1 to 430       430/430
(100 %)
4 diff
(99.1 %id)
DA862662 placenta .b 18 to 505 2 to 489   capped   488/491
(99 %)
2 diff
(99.6 %id)
DA864386 placenta .b 20 to 580 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
BP312748 mammary gland .b 22 to 604 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BE903763 choriocarcinoma, placenta .b 71 to 564 27 to 530       504/532
(94 %)
22 diff
(95.9 %id)
CN427439 embryonic stem cells, cell lines H1, H7, andH9 .b 84 to 730 1 to 646       646/646
(100 %)
7 diff
(99.0 %id)
CX751670 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 86 to 783 1 to 692     Submitted on the opposite strand 692/838
(82 %)
10 diff
(98.9 %id)
BE796928 lung, small cell carcinoma .b 91 to 840 33 to 786       754/881
(85 %)
26 diff
(97.1 %id)
BE279405 choriocarcinoma, placenta .b 106 to 650 1 to 545       545/545
(100 %)
0 diff
(100 %id)
BE897911 melanotic melanoma, skin .b 109 to 814 1 to 702       702/961
(73 %)
21 diff
(97.9 %id)
CV024678 mixed .b 110 to 538 1 to 428       428/428
(100 %)
22 diff
(94.9 %id)
BQ320159 colon .b 234 to 516 7 to 287       281/287
(97 %)
9 diff
(96.9 %id)
DB076523 testis .b 397 to 962 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DB142826 thymus .b 424 to 956 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
AI909393 breast .b 529 to 711 1 to 183       183/183
(100 %)
5 diff
(97.3 %id)
CN427442 embryonic stem cells, cell lines H1, H7, andH9 .b 536 to 783 1 to 247       247/247
(100 %)
1 diff
(99.6 %id)
CD358166 testis .b 607 to 1264 1 to 666       666/771
(86 %)
12 diff
(98.5 %id)
BE731237 choriocarcinoma, placenta .b 743 to 1596 1 to 851       851/1156
(73 %)
20 diff
(98.3 %id)
DB126413 thymus .b 810 to 1372 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BE733220 choriocarcinoma, placenta .b 831 to 1582 1 to 745       745/934
(79 %)
27 diff
(97.2 %id)
BE265950 lung, small cell carcinoma .b 907 to 1544 1 to 646       646/646
(100 %)
11 diff
(98.3 %id)
BQ431649 melanotic melanoma, skin .b 953 to 1675 1 to 725   tiling clone,   725/921
(78 %)
12 diff
(98.7 %id)
CN427441 embryonic stem cells, cell lines H1, H7, andH9 .b 1177 to 1597 13 to 435       423/435
(97 %)
6 diff
(98.7 %id)
BG340995 B-cells, primary B-cells from tonsils (cell line) .b 1285 to 1735 1 to 453       453/453
(100 %)
6 diff
(98.7 %id)
DB026924 testis .b 1520 to 2085 2 to 567   tiling clone, capped   566/566
(100 %)
3 diff
(99.5 %id)
BE792734 lung, small cell carcinoma .b 1690 to 2477 27 to 822   tiling clone,   796/892
(89 %)
26 diff
(97.1 %id)
DB027430 testis .b 1724 to 2315 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
AA299517 uterus .b 1813 to 2112 1 to 301       301/301
(100 %)
4 diff
(98.7 %id)
AK000784 colon .b 1848 to 3535 1 to 1688   tiling clone, available from FLJ, AAA   1688/1688
(100 %)
0 diff
(100 %id)
BP220883 colon .b 1848 to 2416 1 to 569       569/569
(100 %)
15 diff
(97.4 %id)
CB136645 Liver .b 1860 to 2388 1 to 530       530/530
(100 %)
1 diff
(99.9 %id)
BP350404 brain .b 1878 to 2457 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BM758145 stomach .b 1910 to 2358 1 to 449       449/449
(100 %)
0 diff
(100 %id)
BM783246 stomach .b 1910 to 2582 1 to 674       674/674
(100 %)
1 diff
(99.9 %id)
BM783068 stomach .b 1910 to 2583 1 to 675       675/675
(100 %)
3 diff
(99.6 %id)
BM783764 stomach .b 1910 to 2614 1 to 706       704/706
(99 %)
1 diff
(99.9 %id)
BM789695 stomach .b 1910 to 2585 1 to 677       677/677
(100 %)
1 diff
(99.9 %id)
BI087490 cervix .b 1911 to 2622 1 to 712       712/713
(99 %)
6 diff
(99.2 %id)
BF028977 bladder, carcinoma, cell line .b 1912 to 2477 1 to 575       575/1033
(55 %)
24 diff
(97.7 %id)
BF851615 lung_normal .b 1961 to 2252 1 to 290       290/294
(98 %)
8 diff
(97.3 %id)
BG009693 placenta_normal .b 1966 to 2252 7 to 290       284/294
(96 %)
7 diff
(97.7 %id)
BI092871 cervix .b 2028 to 2818 1 to 788       788/852
(92 %)
16 diff
(98.2 %id)
BE564422 bladder, carcinoma, cell line .b 2109 to 2748 1 to 630       630/851
(74 %)
24 diff
(97.2 %id)
W22630 eye, retina .b 2138 to 2648 536 to 30       507/676
(75 %)
12 diff
(98.3 %id)
CX783694 human embryonic stem cells .b 2232 to 2925 1 to 694       694/694
(100 %)
0 diff
(100 %id)
BF770158 epid_tumor .b 2297 to 2732 448 to 15     Submitted on the opposite strand 434/448
(96 %)
0 diff
(100 %id)
BU568915 testis .b 2297 to 2990 1 to 697       697/813
(85 %)
7 diff
(99.2 %id)
T16861   .b 2313 to 2669 1 to 364       364/368
(98 %)
15 diff
(96.0 %id)
Z42234 brain, total brain .b 2314 to 2561 1 to 248       248/248
(100 %)
1 diff
(99.6 %id)
F07004 brain, total brain .b 2314 to 2543 1 to 229       229/229
(100 %)
1 diff
(99.6 %id)
R67166 whole brain .b 2315 to 2752 1 to 444       442/463
(95 %)
11 diff
(97.7 %id)
BE535814 cervix .b 2352 to 3058 1 to 705       705/706
(99 %)
11 diff
(98.5 %id)
AA773929 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2363 to 2851 1 to 489       489/489
(100 %)
4 diff
(99.2 %id)
N58615 liver and spleen .b 2368 to 2647 1 to 280       280/362
(77 %)
3 diff
(99.2 %id)
BF027920 bladder, carcinoma, cell line .b 2416 to 2988 1 to 563       565/856
(66 %)
19 diff
(97.8 %id)
BF769037 epid_tumor .b 2422 to 2985 1 to 565       565/565
(100 %)
9 diff
(98.5 %id)
BF769032 epid_tumor .b 2424 to 2854 1 to 433       433/433
(100 %)
13 diff
(97.0 %id)
AA205702   .b 2428 to 2546 1 to 119       119/124
(95 %)
2 diff
(98.4 %id)
BF769030 epid_tumor .b 2429 to 2854 9 to 435       427/435
(98 %)
14 diff
(96.8 %id)
AA205775   .b 2429 to 2964 1 to 533   fully sequenced,   533/533
(100 %)
6 diff
(98.9 %id)
AA205674   .b 2429 to 2942 1 to 534       534/550
(97 %)
14 diff
(97.5 %id)
BE541446 cervix .b 2449 to 3159 1 to 711       711/897
(79 %)
28 diff
(96.9 %id)
AA486679 lung .b 2456 to 2875 1 to 418       418/418
(100 %)
2 diff
(99.6 %id)
BF843264 head_neck .b 2475 to 2971 507 to 12     Submitted on the opposite strand 496/516
(96 %)
0 diff
(100 %id)
DT217195 brain .b 2527 to 3202 1 to 675       675/675
(100 %)
1 diff
(99.9 %id)
AW577601 breast .b 2550 to 2981 1 to 435       435/435
(100 %)
14 diff
(96.8 %id)
AW577576 breast .b 2551 to 3072 9 to 523       515/524
(98 %)
14 diff
(97.4 %id)
BI094290 cervix .b 2581 to 3467 1 to 887       887/889
(99 %)
38 diff
(95.8 %id)
AI906144 breast .b 2601 to 2971 1 to 378       378/396
(95 %)
15 diff
(96.3 %id)
BE564856 bladder, carcinoma, cell line .b 2601 to 3319 1 to 722       722/722
(100 %)
65 diff
(91.0 %id)
AA301407 testis .b 2737 to 2941 1 to 205       205/205
(100 %)
0 diff
(100 %id)
AW959397   .b 2738 to 3161 1 to 423       423/434
(97 %)
11 diff
(97.5 %id)
BG035744 adenocarcinoma, cell line, Liver .b 2758 to 3473 1 to 710       710/970
(73 %)
14 diff
(98.6 %id)
BF926652 nervous_tumor .b 2763 to 3043 1 to 281       281/281
(100 %)
0 diff
(100 %id)
BM725379 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2767 to 3089 1 to 324   fully sequenced,   324/324
(100 %)
1 diff
(99.7 %id)
H00733 placenta .b 2810 to 3218 6 to 435   fully sequenced,   428/433
(98 %)
53 diff
(87.8 %id)
N41868 placenta .b 2823 to 3092 1 to 270   fully sequenced,   270/270
(100 %)
0 diff
(100 %id)
N57321 placenta .b 2827 to 3188 1 to 363   fully sequenced,   363/363
(100 %)
3 diff
(99.2 %id)
BE714630 head_neck .b 2858 to 2981 1 to 124       124/124
(100 %)
3 diff
(97.6 %id)
BG571949 placenta .b 2874 to 3342 1 to 469       469/469
(100 %)
1 diff
(99.8 %id)
AI968100 pooled germ cell tumors .b 2897 to 3537 641 to 1       641/641
(100 %)
1 diff
(99.9 %id)
AI962526 pooled germ cell tumors .b 2903 to 3542 646 to 6       641/646
(99 %)
11 diff
(98.3 %id)
CN427446 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2905 to 3453 1 to 549       549/549
(100 %)
0 diff
(100 %id)
BE220296 carcinoid, lung .b 2905 to 3538 636 to 5       632/639
(98 %)
23 diff
(96.5 %id)
AI638191 pooled germ cell tumors .b 2930 to 3537 608 to 1       608/608
(100 %)
0 diff
(100 %id)
AA205663   .b 2934 to 3534 596 to 1   fully sequenced,   598/598
(100 %)
9 diff
(98.5 %id)
AA256059 germinal center B cell .b 2938 to 3246 1 to 306   fully sequenced,   306/306
(100 %)
6 diff
(98.1 %id)
AW590203 pooled germ cell tumors .b 2942 to 3531 603 to 14   AAA   590/590
(100 %)
3 diff
(99.5 %id)
AW590212 pooled germ cell tumors .b 2942 to 3533 592 to 1       592/592
(100 %)
1 diff
(99.9 %id)
AW593447 pooled germ cell tumors .b 2945 to 3535 591 to 1       591/591
(100 %)
1 diff
(99.9 %id)
DB223971 trachea .b 2958 to 3286 2 to 330   capped   329/329
(100 %)
1 diff
(99.7 %id)
BG181838   .b 2988 to 3538 3 to 552       550/553
(99 %)
12 diff
(97.9 %id)
CN427443 embryonic stem cells, DMSO-treated H9 cellline .b 2992 to 3535 9 to 552   AAA   544/552
(98 %)
8 diff
(98.6 %id)
BQ017391 lung, Metastatic Chondrosarcoma .b 2992 to 3533 560 to 19   AAA   542/542
(100 %)
1 diff
(99.9 %id)
N53214 liver and spleen .b 3017 to 3535 516 to 1       516/517
(99 %)
14 diff
(97.3 %id)
AA205709   .b 3017 to 3534 518 to 1       518/518
(100 %)
3 diff
(99.5 %id)
CV370477 ovary .b 3026 to 3487 464 to 1     Submitted on the opposite strand 464/479
(96 %)
66 diff
(86.3 %id)
AA641283 invasive tumor (cell line), Prostate .b 3041 to 3313 273 to 1       273/273
(100 %)
2 diff
(99.3 %id)
BM677807 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 3059 to 3540 500 to 19   fully sequenced, AAA   482/482
(100 %)
4 diff
(99.2 %id)
N30623 placenta .b 3062 to 3538 475 to 1   fully sequenced,   475/475
(100 %)
12 diff
(97.5 %id)
AA777617 liver and spleen .b 3062 to 3524 458 to 1       458/458
(100 %)
9 diff
(98.1 %id)
AA486579 lung .b 3071 to 3538 472 to 5       468/472
(99 %)
0 diff
(100 %id)
BP386388 pancreatic islet .b 3074 to 3538 1 to 465     Submitted on the opposite strand 465/466
(99 %)
5 diff
(99.0 %id)
AI655137 pooled germ cell tumors .b 3074 to 3535 473 to 12   AAA   462/462
(100 %)
0 diff
(100 %id)
BU752507 placenta .b 3076 to 3542 472 to 11       462/472
(97 %)
1 diff
(99.8 %id)
AI742717 pooled .b 3077 to 3534 458 to 1       458/458
(100 %)
6 diff
(98.7 %id)
BE672098 pooled germ cell tumors .b 3077 to 3536 460 to 1       460/460
(100 %)
0 diff
(100 %id)
BM979746 lung, Primary Lung Epithelial Cells .b 3079 to 3431 149 to 501   AAA Submitted on the opposite strand 353/493
(71 %)
10 diff
(98.0 %id)
BF062933 colon, colon tumor, RER+ .b 3083 to 3535 456 to 3       454/456
(99 %)
0 diff
(100 %id)
AI146844 heart .b 3085 to 3537 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AI159827 placenta .b 3088 to 3542 458 to 9       450/458
(98 %)
2 diff
(99.6 %id)
AI990191 pooled germ cell tumors .b 3088 to 3534 449 to 3       447/449
(99 %)
0 diff
(100 %id)
AW014522   .b 3090 to 3533 461 to 18   AAA   444/444
(100 %)
0 diff
(100 %id)
AA563660 colon .b 3093 to 3538 447 to 2       446/447
(99 %)
0 diff
(100 %id)
AI078792 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3093 to 3540 448 to 1       448/448
(100 %)
1 diff
(99.8 %id)
BF062045 pooled germ cell tumors .b 3098 to 3538 445 to 5       441/445
(99 %)
0 diff
(100 %id)
AW044164 pooled .b 3102 to 3534 433 to 1       433/433
(100 %)
4 diff
(99.1 %id)
DB509926 testis .b 3107 to 3535 1 to 428     Submitted on the opposite strand 428/428
(100 %)
1 diff
(99.8 %id)
AI637620 pooled germ cell tumors .b 3107 to 3535 443 to 15   AAA   429/429
(100 %)
0 diff
(100 %id)
DB525948 testis .b 3121 to 3531 1 to 411     Submitted on the opposite strand 411/413
(99 %)
2 diff
(99.6 %id)
DB508411 testis .b 3123 to 3538 1 to 418     Submitted on the opposite strand 418/420
(99 %)
7 diff
(98.4 %id)
BF445417 pooled germ cell tumors .b 3124 to 3535 412 to 1       412/412
(100 %)
0 diff
(100 %id)
BU752437 placenta .b 3127 to 3542 420 to 11       410/420
(97 %)
0 diff
(100 %id)
N32225 placenta .b 3129 to 3535 404 to 1   fully sequenced,   404/404
(100 %)
13 diff
(96.8 %id)
AI653704 pooled germ cell tumors .b 3144 to 3537 394 to 1       394/394
(100 %)
3 diff
(99.3 %id)
AW006249 pooled germ cell tumors .b 3144 to 3537 394 to 1       394/394
(100 %)
0 diff
(100 %id)
AA554325 colon .b 3145 to 3535 391 to 1       391/395
(98 %)
4 diff
(99.0 %id)
AW236554 pooled germ cell tumors .b 3145 to 3537 393 to 1       393/393
(100 %)
0 diff
(100 %id)
R59984 whole brain .b 3157 to 3538 386 to 4       383/396
(96 %)
0 diff
(100 %id)
H00645 placenta .b 3188 to 3533 349 to 1   fully sequenced,   349/349
(100 %)
6 diff
(98.3 %id)
AA256068 germinal center B cell .b 3216 to 3535 315 to 1   fully sequenced,   315/315
(100 %)
8 diff
(97.5 %id)
Z40114 brain, total brain .b 3311 to 3533 223 to 1       223/223
(100 %)
3 diff
(98.7 %id)
F01762 brain, total brain .b 3321 to 3533 213 to 1       213/215
(99 %)
3 diff
(98.7 %id)
AA205611   .b 3334 to 3534 202 to 1       202/202
(100 %)
1 diff
(99.6 %id)
AK292681 thymus .c 1 to 3496 1 to 3496 G295V T526A A974T R1014W A1049E tiling clone,   3496/3496
(100 %)
12 diff
(99.7 %id)
DB146251 thymus .c 2 to 536 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
NM_001174082.1   .d -10 to 3496 1 to 3507 exact RefSeq, AAA   3507/3507
(100 %)
0 diff
(100 %id)
DB460539 testis .d 15 to 501 1 to 487   tiling clone,   487/487
(100 %)
2 diff
(99.6 %id)
DB443473 testis .d 25 to 471 1 to 448       448/448
(100 %)
4 diff
(99.2 %id)
DB074229 testis .d 32 to 520 10 to 498   tiling clone, capped   489/489
(100 %)
1 diff
(99.8 %id)
DA318067 hippocampus .d 51 to 511 2 to 461   capped   460/461
(99 %)
3 diff
(99.4 %id)
DB458380 testis .d 51 to 521 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
AL544625 placenta, Placenta Cot 25-normalized .d 65 to 399 1 to 349       349/358
(97 %)
20 diff
(94.5 %id)
CN427444 embryonic stem cells, DMSO-treated H9 cellline .d 67 to 466 1 to 400       400/400
(100 %)
0 diff
(100 %id)
AF298547   .d 73 to 3491 1 to 3416 L35P R342K C958N N959Q Q960S ... tiling clone, AAA   3416/3416
(100 %)
6 diff
(99.9 %id)
NM_001174083.1   .e -10 to 3493 1 to 3504 exact RefSeq, AAA   3504/3504
(100 %)
0 diff
(100 %id)
AK302989 testis .e 21 to 3431 1 to 3411 E46G G193S T493A E499G T506A tiling clone,   3411/3411
(100 %)
12 diff
(99.7 %id)
DC404054 testis .e 21 to 566 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
AB209300 brain .f 1 to 3420 1 to 3418 T505A M746V F747S P748R A749I ... tiling clone,   3418/3418
(100 %)
7 diff
(99.8 %id)
BC039269 testis .g 1 to 3738 1 to 3738 I58V tiling clone, available from MGC, AAA   3738/3738
(100 %)
7 diff
(99.9 %id)
TI_149284695   .h 1 to 662 737 to 76 G2R H3G L9X E67G AAA   662/1105
(59 %)
7 diff
(99.4 %id)
BM984503 lung, Primary Lung Epithelial Cells .h 6 to 662 675 to 19   tiling clone, AAA   657/661
(99 %)
4 diff
(99.4 %id)
DB523876 testis .h 176 to 623 1 to 448   tiling clone, Submitted on the opposite strand 448/448
(100 %)
0 diff
(100 %id)
AW996160 breast_normal .i 1 to 278 277 to 1   tiling clone, Submitted on the opposite strand 277/281
(98 %)
10 diff
(96.5 %id)
AF269288   .i 20 to 1769 18 to 1767 exact tiling clone, AAA   1750/1750
(100 %)
2 diff
(99.9 %id)
BE142515 head_neck .i 333 to 457 21 to 145       125/145
(86 %)
6 diff
(95.9 %id)
AW817024 stomach .i 592 to 1078 6 to 492       487/492
(98 %)
6 diff
(98.8 %id)
EC444881 Prostate .i 1029 to 1123 1 to 94       94/94
(100 %)
5 diff
(94.7 %id)
DB070808 testis .j 1 to 550 2 to 551 exact tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
DA419220 cord Blood .k 1 to 549 2 to 550 exact tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DB030600 testis .l 1 to 590 2 to 591 exact tiling clone, capped   590/590
(100 %)
0 diff
(100 %id)
DA248365 brain .m 1 to 588 2 to 589 Q54R M82I tiling clone, capped   588/592
(99 %)
3 diff
(99.5 %id)
DA861276 placenta .n 1 to 591 2 to 592 exact tiling clone, capped   591/591
(100 %)
1 diff
(99.9 %id)
BQ435791 testis .o 1 to 537 1 to 537 D80E C86L C87L D88R L89S ... tiling clone,   706/766
(92 %)
22 diff
(97.2 %id)
BF931293 nervous_tumor .p 1 to 405 415 to 11 exact tiling clone, Submitted on the opposite strand 405/415
(97 %)
0 diff
(100 %id)
AI820831 ovarian tumor, ovary .p 278 to 869 1 to 592   tiling clone,   592/592
(100 %)
5 diff
(99.2 %id)
BX088793 ovarian tumor, ovary .p 279 to 772 1 to 497   tiling clone,   497/497
(100 %)
9 diff
(98.2 %id)
DA853734 placenta .q 1 to 576 2 to 578 E38X L39A Q40P K41E I42D ... tiling clone, capped   577/577
(100 %)
4 diff
(99.4 %id)
BF085928 placenta_normal .r-u 1 to 213 1 to 216   tiling clone,   216/219
(98 %)
10 diff
(95.5 %id)
AI206329 pooled germ cell tumors .r-u 36 to 414 379 to 1       379/383
(98 %)
1 diff
(99.8 %id)
AW243537 pooled germ cell tumors .r-u 39 to 415 377 to 1   tiling clone,   377/377
(100 %)
0 diff
(100 %id)
AA765281 germinal center B cell .r-u 42 to 414 399 to 32   AAA   368/368
(100 %)
9 diff
(97.6 %id)
T16860   .r-u 49 to 412 365 to 1       365/367
(99 %)
5 diff
(98.7 %id)
N59086 liver and spleen .r-u 69 to 412 346 to 4       343/346
(99 %)
0 diff
(100 %id)
BM929656 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .r-u 75 to 413 1 to 341       341/371
(91 %)
9 diff
(97.6 %id)
CA312145 Human Lung Epithelial cells, lung .r-u 95 to 412 336 to 19   AAA   318/322
(98 %)
5 diff
(98.5 %id)
AI149479 placenta .r-u 109 to 421 315 to 9 H18P     307/315
(97 %)
0 diff
(100 %id)
AA909318 pooled .r-u 136 to 421 287 to 2 exact tiling clone,   286/287
(99 %)
0 diff
(100 %id)
AW594490 pooled germ cell tumors .r-u 136 to 417 284 to 3       282/284
(99 %)
0 diff
(100 %id)
AW236428 pooled germ cell tumors .r-u 143 to 414 272 to 1       272/272
(100 %)
0 diff
(100 %id)
BF059602 pooled germ cell tumors .r-u 145 to 415 313 to 27   AAA   287/288
(99 %)
25 diff
(91.4 %id)
AA644247 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .r-u 157 to 421 266 to 2 exact     265/266
(99 %)
0 diff
(100 %id)
AA834460 epithelium (cell line), Prostate .r-u 167 to 417 246 to 1       246/246
(100 %)
7 diff
(97.2 %id)
AA548119 germ cell tumor .r-u 171 to 417 244 to 3       242/244
(99 %)
0 diff
(100 %id)
AA743510 germinal center B cell .r-u 188 to 412 250 to 26   AAA   225/225
(100 %)
0 diff
(100 %id)
AI672532 pooled germ cell tumors .r-u 188 to 421 241 to 8 R11K H18P     234/241
(97 %)
0 diff
(100 %id)
AI638784 pooled germ cell tumors .r-u 222 to 415 194 to 1       194/194
(100 %)
1 diff
(99.5 %id)
AI078796 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .r-u 299 to 419 121 to 1       121/121
(100 %)
2 diff
(98.4 %id)
AA983380 Kidney, kidney tumor .s-u 1 to 408 408 to 1 G39V L56V tiling clone,   408/408
(100 %)
2 diff
(99.6 %id)
BG008624 placenta_normal .t-u 1 to 214 6 to 215   tiling clone,   210/215
(97 %)
6 diff
(97.3 %id)
BM718854 eye, fetal eye Gene NLRP2andRPL36AP50, variant not shown         Suspected internal deletion, this clone was ignored    
TI_151758463   Gene NLRP2andRPL36AP50, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AL513751 placenta Gene NLRP2andRPL36AP50, variant not shown         This clone was ignored    
AL513752 placenta Gene NLRP2andRPL36AP50, variant not shown         This clone was ignored    
BX109700 pooled germ cell tumors Gene NLRP2andRPL36AP50, variant not shown       AAA This clone was ignored    
AI821465 ovarian tumor, ovary Gene NLRP2andRPL36AP50, variant not shown         This clone was ignored    
H62421 ovarian tumor, ovary Gene NLRP2andRPL36AP50, variant not shown         This clone was ignored    
AA482109 ovarian tumor, ovary Gene NLRP2andRPL36AP50, variant not shown         This clone was ignored    
AI821658 ovarian tumor, ovary Gene NLRP2andRPL36AP50, variant not shown         This clone was ignored    
AI656036 pooled germ cell tumors Gene NLRP2andRPL36AP50, variant not shown         This clone was ignored    
AI632511 pooled germ cell tumors Gene NLRP2andRPL36AP50, variant not shown         Suspected internal deletion, this clone was ignored    
AI968771 pooled germ cell tumors Gene NLRP2andRPL36AP50, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BF112233 pooled Gene NLRP2andRPL36AP50, variant not shown         This clone was ignored    
DB082278 testis Gene NLRP2andRPL36AP50, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r-u, .s-u, .t-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI