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Gene NLRP11TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
39 supporting clones for gene NLRP11 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_145007.3   .a 1 to 4034 1 to 4034 exact RefSeq, AAA   4034/4034
(100 %)
0 diff
(100 %id)
AY095145   .a 613 to 4034 1 to 3424   tiling clone, AAA   3424/3424
(100 %)
10 diff
(99.8 %id)
AY168967   .a 624 to 4034 1 to 3413   AAA   3413/3413
(100 %)
4 diff
(99.9 %id)
BC034730 Lymph, lymphoma .a 624 to 4034 1 to 3413   available from MGC, AAA   3413/3413
(100 %)
4 diff
(99.9 %id)
BF797150 lymph, lymphoma, cell line .a 625 to 1423 1 to 797       797/1013
(78 %)
28 diff
(97.3 %id)
BM476390 lymph, lymphoma, cell line .a 628 to 1628 1 to 1005       1005/1007
(99 %)
33 diff
(96.8 %id)
BM804437 lymph, lymphoma, cell line .a 644 to 1513 1 to 895       895/1167
(76 %)
68 diff
(94.2 %id)
AY154466   .a 712 to 3813 1 to 3102   tiling clone,   3102/3102
(100 %)
2 diff
(100.0 %id)
AY226382   .a 712 to 3813 1 to 3102       3102/3102
(100 %)
3 diff
(100.0 %id)
AY168968   .a 977 to 4034 17 to 3085   AAA   3079/3085
(99 %)
59 diff
(98.1 %id)
BF795708 lymph, lymphoma, cell line .a 982 to 1711 19 to 739       721/947
(76 %)
11 diff
(98.9 %id)
DB045018 testis .a 1767 to 2334 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
BP227190   .a 1774 to 2359 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
DA048835   .a 1802 to 2358 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA371482 thalamus .a 1811 to 2436 2 to 628   capped   627/627
(100 %)
1 diff
(99.9 %id)
AW809232 stomach .a 2582 to 3138 572 to 6       567/572
(99 %)
14 diff
(97.6 %id)
AW809300 stomach .a 2670 to 3172 518 to 16       503/518
(97 %)
9 diff
(98.3 %id)
BU622142 Cell Line, Chondrosarcoma .a 3294 to 4041 778 to 19   tiling clone, AAA   760/767
(99 %)
11 diff
(98.6 %id)
BF975539 B-cells, primary B-cells from tonsils (cell line) .a 3334 to 3957 1 to 621       621/802
(77 %)
7 diff
(99.2 %id)
BG686053 B-cells, primary B-cells from tonsils (cell line) .a 3334 to 3942 1 to 607       607/636
(95 %)
8 diff
(98.8 %id)
BG759089 B-cells, primary B-cells from tonsils (cell line) .a 3334 to 3942 1 to 612       612/721
(84 %)
11 diff
(98.5 %id)
AW815818 stomach .a 3349 to 3567 235 to 14       222/247
(89 %)
0 diff
(100 %id)
BG685962 B-cells, primary B-cells from tonsils (cell line) .a 3410 to 3919 84 to 595       512/596
(85 %)
10 diff
(98.4 %id)
DB296211   .a 3474 to 4034 558 to 1       558/558
(100 %)
4 diff
(99.3 %id)
DB507233 testis .a 3665 to 4024 1 to 363     Submitted on the opposite strand 363/363
(100 %)
10 diff
(97.3 %id)
DB069402 testis .b 1 to 553 2 to 557   tiling clone, capped Suspected internal deletion 556/556
(100 %)
4 diff
(99.3 %id)
DB340017 testis .b 3131 to 3702 564 to 1   tiling clone, Suspected internal deletion 564/565
(99 %)
0 diff
(100 %id)
AK310394 testis .c 1 to 3069 2 to 3070 L11F A267S P795S A812P tiling clone,   3070/3070
(100 %)
6 diff
(99.9 %id)
BI459025 testis .d 1 to 739 1 to 735   available from MGC,   735/735
(100 %)
22 diff
(97.1 %id)
BC036506 testis .d 6 to 3782 6 to 3777 A37T R90S D91* tiling clone, available from MGC, AAA   3772/3772
(100 %)
8 diff
(99.8 %id)
AK129784 dermoid tumor .e 1 to 2099 1 to 2099 P84L tiling clone, available from FLJ,   2099/2099
(100 %)
1 diff
(100.0 %id)
AK090621   .e 28 to 2099 1 to 2068   tiling clone, available from FLJ,   2068/2068
(100 %)
6 diff
(99.8 %id)
AX746538   .e 28 to 2099 1 to 2068       2068/2068
(100 %)
6 diff
(99.8 %id)
AW809289 stomach .e 680 to 1231 552 to 1       552/552
(100 %)
1 diff
(99.9 %id)
AK097646 testis .f-u 1 to 1842 2 to 1843 exact tiling clone, available from FLJ,   1843/1843
(100 %)
0 diff
(100 %id)
DB043433 testis .f-u 1 to 573 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DB453897 testis .f-u 18 to 497 1 to 480       480/480
(100 %)
0 diff
(100 %id)
DB048164 testis .f-u 65 to 612 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
AA976034 pooled germ cell tumors .f-u 82 to 655 580 to 8       573/580
(98 %)
0 diff
(100 %id)
DB338024 testis .f-u 1318 to 1842 525 to 1       525/525
(100 %)
0 diff
(100 %id)
DB519352 testis .f-u 1422 to 1846 1 to 433   tiling clone, Submitted on the opposite strand 433/435
(99 %)
7 diff
(98.4 %id)
DB442396 testis .g 1 to 412 2 to 419 E12* tiling clone,   416/419
(99 %)
10 diff
(97.7 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC