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Gene NAALADL2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
55 supporting clones for gene NAALADL2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AJ607396   .a 1 to 1000 1 to 1000   tiling clone, AAA   1000/1013
(98 %)
1 diff
(100.0 %id)
AK308416 trachea .a 26 to 1602 1 to 1576   tiling clone,   1576/1576
(100 %)
3 diff
(99.9 %id)
DB232793 trachea .a 27 to 565 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
AL832144 human fetal kidney .a 42 to 4951 1 to 4910 M194T P385S P622R L677S tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 4910/4910
(100 %)
11 diff
(99.8 %id)
NM_207015.2   .a 42 to 4953 1 to 4912 exact RefSeq,   4912/4912
(100 %)
0 diff
(100 %id)
AW630277 2 pooled high-grade transitional celltumors, genitourinary tract .a 64 to 484 10 to 430       421/430
(97 %)
6 diff
(98.7 %id)
BG401087 Kidney .a 163 to 674 123 to 648   available from MGC,   526/770
(68 %)
34 diff
(95.6 %id)
DA874751 Prostate .a 163 to 624 110 to 570   capped   461/569
(81 %)
6 diff
(99.0 %id)
DB196505 trachea .a 165 to 680 16 to 531   capped   516/567
(91 %)
9 diff
(98.5 %id)
DB234690 trachea .a 165 to 680 16 to 531   capped   516/571
(90 %)
10 diff
(98.3 %id)
DB287613 uterus .a 172 to 524 216 to 568   capped   353/567
(62 %)
0 diff
(100 %id)
EL735825 mixed .a 180 to 680 1 to 501       501/608
(82 %)
7 diff
(98.9 %id)
TI_1948221766   .a 180 to 680 124 to 624       501/1243
(40 %)
7 diff
(99.5 %id)
CV570097 cornea, eye .a 503 to 1132 1 to 631       631/631
(100 %)
3 diff
(99.6 %id)
AW820691 stomach .a 888 to 1486 598 to 1       598/598
(100 %)
6 diff
(99.0 %id)
AL832931 stomach .a 957 to 3529 1 to 2573   available from DKFZ, AAA   2573/2598
(99 %)
17 diff
(99.4 %id)
CR737608 Kidney .a 2023 to 2371 30 to 378       349/378
(92 %)
7 diff
(98.2 %id)
W03664 liver and spleen .a 2030 to 2509 1 to 484       484/487
(99 %)
8 diff
(98.4 %id)
BG202155   .a 2310 to 2783 1 to 475   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 475/476
(99 %)
9 diff
(98.2 %id)
BG199067   .a 2313 to 2783 3 to 477   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 475/477
(99 %)
6 diff
(98.8 %id)
BG187769   .a 2314 to 2805 37 to 528   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 492/531
(92 %)
6 diff
(98.9 %id)
BG200123   .a 2314 to 3125 1 to 810       810/843
(96 %)
17 diff
(98.0 %id)
BG204720   .a 2314 to 3100 1 to 786   tiling clone,   786/787
(99 %)
14 diff
(98.3 %id)
BG201631   .a 2316 to 3154 1 to 839       839/840
(99 %)
8 diff
(99.1 %id)
BG205278   .a 2316 to 3101 1 to 786       786/788
(99 %)
25 diff
(96.9 %id)
BG214256   .a 2316 to 2788 1 to 473       473/904
(52 %)
6 diff
(99.4 %id)
BG198550   .a 2320 to 2781 1 to 461   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 461/461
(100 %)
3 diff
(99.4 %id)
BG208963   .a 2327 to 2910 1 to 585       585/749
(78 %)
33 diff
(95.6 %id)
AW070784 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .a 2335 to 2790 457 to 2       456/457
(99 %)
0 diff
(100 %id)
BG184095   .a 2338 to 2653 1 to 317       317/317
(100 %)
6 diff
(98.2 %id)
BG183047   .a 2343 to 2666 1 to 326       326/326
(100 %)
15 diff
(95.4 %id)
BG184745   .a 2407 to 2616 1 to 209       209/209
(100 %)
5 diff
(97.7 %id)
AI589206 Kidney .a 3078 to 3572 497 to 3   tiling clone,   495/497
(99 %)
0 diff
(100 %id)
AL708029 human skeletal muscle .a 3156 to 3720 1 to 567       567/567
(100 %)
2 diff
(99.7 %id)
EC579248 Prostate .a 3188 to 3310 1 to 121       121/121
(100 %)
2 diff
(98.4 %id)
AI783597 Kidney .a 3223 to 3570 369 to 21   AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 349/349
(100 %)
2 diff
(99.5 %id)
BE867173 adenocarcinoma, colon .a 3557 to 4205 1 to 651       651/651
(100 %)
4 diff
(99.4 %id)
BG743391 skin .a 3578 to 4519 1 to 941   tiling clone,   941/978
(96 %)
38 diff
(96.2 %id)
BG611802 adenocarcinoma, Prostate .a 3859 to 4513 1 to 663   AAA   663/683
(97 %)
21 diff
(97.0 %id)
BX108884 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 4486 to 4951 481 to 15   tiling clone, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 467/467
(100 %)
2 diff
(99.6 %id)
AA578476 Prostate, prostatic intraepithelial neoplasia - highgrade .a 4606 to 4916 318 to 8       311/318
(97 %)
0 diff
(100 %id)
AI540634 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 4606 to 4953 349 to 2       348/349
(99 %)
0 diff
(100 %id)
DA454590 tongue, tumor tissue .b -9 to 553 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
AK126272 trachea .b 1 to 2165 2 to 2166 G61S I121M M187T P378S W502R tiling clone, available from FLJ,   2166/2612
(82 %)
12 diff
(99.6 %id)
DB198865 trachea .b 1 to 576 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
AK131044 testis .c 1 to 1574 1 to 1574 M16T L379P P396R tiling clone, available from FLJ,   1574/1574
(100 %)
5 diff
(99.7 %id)
BC057243 Kidney .d -8 to 1559 126 to 1692 G53S I113M tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 1567/1692
(92 %)
9 diff
(99.5 %id)
TI_1948221592   .d 4 to 372 119 to 487   fully sequenced,   369/487
(75 %)
7 diff
(98.6 %id)
TI_1948221942   .d 4 to 372 120 to 488   fully sequenced,   369/488
(75 %)
7 diff
(98.6 %id)
TI_1948222123   .d 4 to 342 118 to 456   fully sequenced,   339/456
(74 %)
7 diff
(98.5 %id)
TI_1948222124   .d 312 to 970 793 to 128   fully sequenced,   666/793
(83 %)
1 diff
(99.9 %id)
TI_1948221593   .d 342 to 970 763 to 125   fully sequenced,   639/763
(83 %)
1 diff
(99.9 %id)
TI_1948221943   .d 342 to 970 759 to 125   fully sequenced,   635/759
(83 %)
1 diff
(99.9 %id)
AI420905 Prostate .d 954 to 1416 468 to 6   tiling clone,   463/468
(98 %)
0 diff
(100 %id)
AJ607397   .e 1 to 816 121 to 936 exact tiling clone, AAA Possibly primed on the genome, locally A rich (20/20 A in genome downstream of last aligned base) 818/936
(87 %)
6 diff
(99.4 %id)
AA403020   .f-u 1 to 440 1 to 440 exact tiling clone,   440/440
(100 %)
1 diff
(99.8 %id)
AA398419   .f-u 447 to 713 268 to 2   tiling clone,   267/268
(99 %)
0 diff
(100 %id)
AW993783 breast_normal .g-u 1 to 483 1 to 484 L68H F87Y C88S tiling clone,   484/484
(100 %)
14 diff
(97.2 %id)
BX648647.
matches multiple genes
human fetal kidney Gene NAALADL2, variant not shown       AAA This clone was ignored, also hits gene blorkoybu    
BX648647.
matches multiple genes
human fetal kidney Gene blorkoybu, variant not shown       AAA This clone was ignored, also hits gene blorkoybu    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC