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Gene N4BP3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
85 supporting clones for gene N4BP3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF310040 muscle, rhabdomyosarcoma .a 1 to 762 1 to 754   tiling clone,   752/842
(89 %)
20 diff
(97.7 %id)
CB961326 placenta, pre-eclamptic placenta .a 80 to 444 18 to 382       365/430
(84 %)
10 diff
(97.7 %id)
CF593938 Human Placenta, placenta .a 88 to 649 29 to 592       567/942
(60 %)
20 diff
(97.9 %id)
CB989360 Human Placenta, placenta .a 112 to 788 28 to 711       687/828
(82 %)
25 diff
(97.0 %id)
BC053323 Ovary, teratocarcinoma .a 113 to 2393 1 to 2281 R163Q available from MGC, AAA   2281/2281
(100 %)
2 diff
(100.0 %id)
NM_015111.1   .a 113 to 6099 1 to 5987 exact RefSeq,   5987/5987
(100 %)
2 diff
(100.0 %id)
BU557397 ovary, teratocarcinoma, cell line .a 114 to 831 1 to 728       728/846
(86 %)
13 diff
(98.5 %id)
DN999380   .a 114 to 622 1 to 510       510/510
(100 %)
13 diff
(97.5 %id)
CR613906 B cells (Ramos cell line) Cot 25-normalized .a 163 to 1877 1 to 1715   tiling clone,   1715/1715
(100 %)
0 diff
(100 %id)
AL583320 B cells from Burkitt lymphoma .a 163 to 1211 1 to 1046       1046/1046
(100 %)
13 diff
(98.8 %id)
AL551198 placenta, Placenta Cot 25-normalized .a 210 to 1223 1 to 1006       1006/1006
(100 %)
14 diff
(98.7 %id)
BX367281   .a 253 to 765 1 to 516       516/928
(55 %)
17 diff
(98.2 %id)
CD109989 Human Placenta, placenta .a 259 to 869 28 to 642       615/797
(77 %)
11 diff
(98.7 %id)
CX762185 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 272 to 1016 1 to 732     Submitted on the opposite strand 732/849
(86 %)
20 diff
(97.7 %id)
TI_154188775   .a 288 to 1061 118 to 884       767/955
(80 %)
16 diff
(98.4 %id)
AB002339 brain .a 352 to 6072 1 to 5721 L29P tiling clone, available from KIAA,   5721/5721
(100 %)
11 diff
(99.9 %id)
CX755052 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 365 to 990 36 to 661     Submitted on the opposite strand 626/661
(94 %)
7 diff
(99.0 %id)
H20766 whole brain .a 391 to 633 1 to 242       242/243
(99 %)
2 diff
(99.2 %id)
BU538610 adenocarcinoma, cell line, breast .a 891 to 1739 1 to 855       855/855
(100 %)
10 diff
(98.9 %id)
TI_154188065   .a 910 to 1482 121 to 693       573/928
(61 %)
16 diff
(98.3 %id)
BX391050   .a 938 to 1874 1 to 938       938/940
(99 %)
17 diff
(98.2 %id)
DA110252 cerebellum .a 1167 to 1703 2 to 540   capped   539/539
(100 %)
2 diff
(99.7 %id)
DA112467 cerebellum .a 1211 to 1767 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
AK295663 hippocampus .a 1245 to 2473 1 to 1229   tiling clone,   1229/1229
(100 %)
0 diff
(100 %id)
DC333116 hippocampus .a 1245 to 1819 1 to 575       575/575
(100 %)
0 diff
(100 %id)
AL551173 placenta, Placenta Cot 25-normalized .a 1284 to 2352 1061 to 1       1061/1062
(99 %)
24 diff
(97.8 %id)
DA396490 thalamus .a 1325 to 1908 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA106032 cerebellum .a 1343 to 1885 2 to 546   capped   545/546
(99 %)
3 diff
(99.5 %id)
BE791648 lung, small cell carcinoma .a 1427 to 2212 1 to 783       783/1086
(72 %)
22 diff
(98.0 %id)
AL583267 B cells from Burkitt lymphoma .a 1527 to 2400 864 to 4       861/890
(96 %)
0 diff
(100 %id)
BM193007 leukopheresis .a 1652 to 1972 321 to 1       321/361
(88 %)
0 diff
(100 %id)
AW083116 colon, moderately differentiated adenocarcinoma .a 1701 to 2435 733 to 1       733/733
(100 %)
19 diff
(97.5 %id)
BE378392 endometrium, adenocarcinoma cell line, uterus .a 1718 to 2387 1 to 667       667/667
(100 %)
5 diff
(99.3 %id)
BX091033 whole brain .a 1924 to 2400 489 to 15   AAA   475/475
(100 %)
3 diff
(99.4 %id)
DA066403 cerebellum .a 2359 to 2919 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
BX505754   .a 2437 to 3057 1 to 621       621/621
(100 %)
1 diff
(99.9 %id)
CA946541 eye, lacrimal gland .a 2850 to 2933 84 to 1     Submitted on the opposite strand 84/84
(100 %)
0 diff
(100 %id)
BU429239 lymph .a 2927 to 3343 1 to 417       417/417
(100 %)
8 diff
(98.1 %id)
AA372485 colon .a 3380 to 3587 1 to 208       208/208
(100 %)
0 diff
(100 %id)
DA863163 placenta .a 3450 to 3962 2 to 514   tiling clone, capped   513/513
(100 %)
2 diff
(99.7 %id)
CV810533 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 3646 to 4394 1 to 749       749/755
(99 %)
5 diff
(99.4 %id)
AU126244   .a 3881 to 4401 2 to 521   tiling clone, capped   520/520
(100 %)
4 diff
(99.3 %id)
BI058798 placenta_normal .a 4290 to 4679 1 to 392       392/395
(99 %)
6 diff
(98.5 %id)
BI058789 placenta_normal .a 4295 to 4679 24 to 408       385/411
(93 %)
2 diff
(99.6 %id)
CX781593 human embryonic stem cells .a 4507 to 5248 1 to 741       741/741
(100 %)
1 diff
(99.9 %id)
BF958962 nervous_normal .a 4748 to 4932 32 to 216       185/229
(80 %)
6 diff
(97.4 %id)
CV808147 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 4778 to 5595 1 to 827       827/899
(91 %)
32 diff
(96.5 %id)
BF309170 muscle, rhabdomyosarcoma .a 4787 to 5591 1 to 804   available from MGC,   804/809
(99 %)
19 diff
(97.7 %id)
BC027715 Muscle, rhabdomyosarcoma .a 4788 to 5578 1 to 791   available from MGC, AAA   791/791
(100 %)
0 diff
(100 %id)
BI064183 uterus_tumor .a 4893 to 5475 583 to 1       583/583
(100 %)
23 diff
(96.1 %id)
BQ308161 breast .a 4900 to 5372 484 to 7       478/484
(98 %)
32 diff
(93.4 %id)
CD673795 eye, lens .a 4941 to 5473 9 to 541       533/541
(98 %)
6 diff
(98.9 %id)
AW887773 ovary .a 5013 to 5194 187 to 9       179/200
(89 %)
0 diff
(100 %id)
CN313590 embryonic stem cells, DMSO-treated H9 cellline .a 5330 to 5723 1 to 394       394/394
(100 %)
3 diff
(99.3 %id)
CX781530 human embryonic stem cells .a 5350 to 6078 754 to 26   AAA   729/729
(100 %)
1 diff
(99.9 %id)
CU455396 epidermis .a 5374 to 5860 500 to 15     Submitted on the opposite strand 486/504
(96 %)
0 diff
(100 %id)
CU457166 epidermis .a 5374 to 5860 500 to 15     Submitted on the opposite strand 486/504
(96 %)
0 diff
(100 %id)
AW139448   .a 5519 to 6072 564 to 13   AAA   552/552
(100 %)
1 diff
(99.9 %id)
BG988084 head_neck .a 5555 to 5841 1 to 286       286/287
(99 %)
11 diff
(96.2 %id)
AV749197 Pituitary .a 5652 to 5960 1 to 306       306/336
(91 %)
14 diff
(95.9 %id)
AI269677 pooled .a 5703 to 6074 369 to 5       365/369
(98 %)
0 diff
(100 %id)
CV569287 cornea, eye .a 5787 to 6394 1 to 605   tiling clone,   605/605
(100 %)
2 diff
(99.7 %id)
AA829496 germinal center B cell .a 5840 to 6074 237 to 3       235/237
(99 %)
0 diff
(100 %id)
AA361587   .a 5920 to 6149 1 to 230       230/230
(100 %)
1 diff
(99.6 %id)
CA487765   .a 5975 to 6860 1 to 898   tiling clone,   898/916
(98 %)
24 diff
(97.4 %id)
AA324640 brain, cerebellum .a 6288 to 6707 1 to 420       420/420
(100 %)
2 diff
(99.6 %id)
AW964731   .a 6289 to 6746 1 to 458       458/458
(100 %)
15 diff
(96.8 %id)
BE932093 head_neck .a 6424 to 6882 470 to 12       459/470
(97 %)
0 diff
(100 %id)
BX092881 placenta .a 6438 to 6991 15 to 569       555/569
(97 %)
6 diff
(99.0 %id)
R68506 placenta .a 6498 to 6782 1 to 292   fully sequenced,   292/292
(100 %)
0 diff
(100 %id)
AA010483 liver and spleen .a 6534 to 7006 1 to 476   fully sequenced,   476/476
(100 %)
4 diff
(99.2 %id)
AA486632 lung .a 6541 to 6978 1 to 438       438/438
(100 %)
0 diff
(100 %id)
BF109568 pooled .a 6558 to 7025 468 to 1   tiling clone,   468/468
(100 %)
0 diff
(100 %id)
BM701487 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 6577 to 6915 1 to 339       339/339
(100 %)
1 diff
(99.8 %id)
BQ025926 placenta .a 6586 to 7025 458 to 19   AAA   440/440
(100 %)
0 diff
(100 %id)
BQ025977 placenta .a 6586 to 7025 458 to 19   AAA   440/440
(100 %)
0 diff
(100 %id)
AI859958 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 6589 to 6797 209 to 1       209/209
(100 %)
0 diff
(100 %id)
H02562 placenta .a 6602 to 7014 437 to 12       426/439
(97 %)
0 diff
(100 %id)
BQ025690 placenta .a 6621 to 7025 423 to 19   AAA   405/405
(100 %)
4 diff
(99.1 %id)
BQ022916 placenta .a 6635 to 7025 409 to 19   AAA   391/391
(100 %)
0 diff
(100 %id)
R68214 placenta .a 6752 to 7004 254 to 1   fully sequenced,   254/254
(100 %)
0 diff
(100 %id)
AA486607 lung .a 6758 to 7016 1 to 260   fully sequenced,   260/260
(100 %)
2 diff
(99.3 %id)
AA010397 liver and spleen .a 6805 to 7025 222 to 1   fully sequenced,   222/222
(100 %)
0 diff
(100 %id)
AA487054 lung .a 6824 to 7025 202 to 1   fully sequenced,   202/202
(100 %)
0 diff
(100 %id)
AK127224 hippocampus .b-u 1 to 4488 3 to 4490 exact tiling clone, available from FLJ,   4490/4490
(100 %)
9 diff
(99.8 %id)
DA313408 hippocampus .b-u 1 to 565 3 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA391447 thalamus .b-u 86 to 662 2 to 578   tiling clone, capped   577/577
(100 %)
0 diff
(100 %id)
DA334638 hippocampus .b-u 148 to 720 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB308614 hippocampus .b-u 3927 to 4488 562 to 1       562/562
(100 %)
0 diff
(100 %id)
CN286186 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c-u 1 to 264 1 to 264 exact tiling clone,   264/264
(100 %)
0 diff
(100 %id)
DA096325 cerebellum Gene N4BP3, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI