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Gene MYOCDTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
66 supporting clones for gene MYOCD back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001146312.1   .a 1 to 6949 2 to 6950 exact RefSeq,   6950/6950
(100 %)
0 diff
(100 %id)
DB226467 trachea .a 1 to 564 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
AY764180   .a 7 to 3297 1 to 3291 exact     3291/3291
(100 %)
1 diff
(100.0 %id)
DB231281 trachea .a 100 to 679 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
AK292885 trachea .a 131 to 3573 1 to 3443 exact tiling clone,   3443/3443
(100 %)
1 diff
(100.0 %id)
DB223667 trachea .a 132 to 701 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
TI_2194575561   .a 235 to 1379 40 to 1172       1133/1236
(91 %)
34 diff
(97.3 %id)
TI_2194575564   .a 235 to 1364 40 to 1147       1108/1209
(91 %)
21 diff
(98.3 %id)
TI_2194576153   .a 235 to 1421 44 to 1215       1172/1297
(90 %)
17 diff
(98.7 %id)
TI_1520874945   .a 236 to 476 268 to 28       241/316
(76 %)
4 diff
(98.8 %id)
BC126307 Lung and heart, PCR rescued clones .a 241 to 3318 1 to 3078 exact     3078/3078
(100 %)
1 diff
(100.0 %id)
BC143391 Lung and heart, PCR rescued clones .a 241 to 3318 1 to 3078 exact     3078/3078
(100 %)
1 diff
(100.0 %id)
TI_1520871733   .a 294 to 775 480 to 1     Submitted on the opposite strand 480/480
(100 %)
8 diff
(98.4 %id)
TI_1520875873   .a 424 to 1009 590 to 8       583/595
(97 %)
8 diff
(98.7 %id)
TI_1520875875   .a 823 to 1331 523 to 16       508/523
(97 %)
5 diff
(99.1 %id)
TI_2194576894   .a 859 to 2100 1 to 1246       1246/1251
(99 %)
50 diff
(96.1 %id)
TI_1520875871   .a 1076 to 1666 597 to 11       587/597
(98 %)
8 diff
(98.7 %id)
TI_2194576895   .a 1128 to 2272 1 to 1151       1151/1163
(98 %)
24 diff
(98.0 %id)
BF376478 testis_normal .a 1319 to 1622 308 to 3       306/310
(98 %)
3 diff
(99.1 %id)
TI_1520875883   .a 1607 to 2228 641 to 18       624/641
(97 %)
0 diff
(100 %id)
TI_2194576890   .a 1643 to 2788 10 to 1171       1160/1234
(94 %)
34 diff
(97.3 %id)
TI_1520871739   .a 1721 to 2159 443 to 6     Submitted on the opposite strand 438/443
(98 %)
0 diff
(100 %id)
TI_1520874947   .a 1835 to 2091 280 to 22       259/280
(92 %)
0 diff
(100 %id)
BU102160   .a 1852 to 2391 540 to 1       540/540
(100 %)
0 diff
(100 %id)
BI051295 placenta_normal .a 1903 to 2332 438 to 7       432/443
(97 %)
0 diff
(100 %id)
TI_2194576891   .a 1980 to 3140 1 to 1166       1166/1239
(94 %)
32 diff
(97.5 %id)
TI_1520874897   .a 2198 to 3326 1174 to 60       1115/1212
(91 %)
24 diff
(98.1 %id)
TI_2194575570   .a 2203 to 3318 1174 to 67       1108/1222
(90 %)
16 diff
(98.7 %id)
TI_2194576534   .a 2295 to 3318 1095 to 73       1023/1290
(79 %)
3 diff
(99.8 %id)
TI_2194575567   .a 2303 to 3318 1080 to 67       1014/1209
(83 %)
7 diff
(99.5 %id)
TI_1520875877   .a 2404 to 2750 353 to 11       343/354
(96 %)
12 diff
(96.7 %id)
TI_2194576892   .a 2524 to 3318 1 to 793       793/1273
(62 %)
5 diff
(99.7 %id)
TI_1520875509   .a 2696 to 3326 762 to 131       632/762
(82 %)
9 diff
(98.9 %id)
TI_1520875539   .a 2779 to 3326 680 to 131       550/682
(80 %)
8 diff
(98.9 %id)
DR006399 Prostate .a 2822 to 3338 1 to 517       517/517
(100 %)
5 diff
(99.1 %id)
AK095846   .a 2838 to 4929 1 to 2091   tiling clone, available from FLJ,   2091/2091
(100 %)
7 diff
(99.7 %id)
DA551649   .a 2839 to 3339 2 to 502   capped   501/501
(100 %)
2 diff
(99.7 %id)
TI_2194576893   .a 2887 to 3318 1 to 432       432/1205
(35 %)
4 diff
(99.7 %id)
BF514073   .a 3947 to 4205 1 to 259   AAA Submitted on the opposite strand 259/269
(96 %)
9 diff
(96.7 %id)
AK096753 Prostate .a 3957 to 6949 1 to 2993   tiling clone, available from FLJ,   2993/2993
(100 %)
2 diff
(100.0 %id)
DA868688 Prostate .a 3958 to 4492 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DB350019 trachea .a 4368 to 4929 562 to 1       562/562
(100 %)
1 diff
(99.9 %id)
DB318351   .a 4376 to 4929 554 to 1       554/554
(100 %)
1 diff
(99.9 %id)
AI452798 pooled .a 4423 to 4928 506 to 1       506/506
(100 %)
1 diff
(99.9 %id)
AI888595 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 4435 to 4929 495 to 1       495/495
(100 %)
1 diff
(99.8 %id)
AI167638 pooled .a 4466 to 4928 463 to 1       463/463
(100 %)
3 diff
(99.4 %id)
AW181975 pooled .a 4554 to 4932 379 to 1       379/379
(100 %)
2 diff
(99.5 %id)
BQ022363 placenta .a 4638 to 4929 309 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 292/293
(99 %)
4 diff
(98.7 %id)
AW085526 pooled .a 4675 to 4929 255 to 1       255/255
(100 %)
3 diff
(98.9 %id)
NM_153604.2   .b 1 to 6805 2 to 6806 exact RefSeq,   6806/6806
(100 %)
0 diff
(100 %id)
AF532596   .b 299 to 3115 1 to 2817 exact tiling clone,   2817/2817
(100 %)
0 diff
(100 %id)
AK097821 testis .c 1 to 2344 2 to 2345 exact tiling clone, available from FLJ,   2345/2345
(100 %)
2 diff
(100.0 %id)
NM_001146313.1   .c 1 to 2344 1 to 2344 exact RefSeq,   2344/2344
(100 %)
0 diff
(100 %id)
DB054369 testis .c 1 to 572 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB338808 testis .c 1835 to 2344 511 to 1       511/518
(98 %)
5 diff
(99.1 %id)
BX640673 human uterus .d 1 to 3617 1 to 3617 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 3617/3617
(100 %)
1 diff
(100.0 %id)
CF272628   .d 280 to 1348 1 to 1101       1101/1101
(100 %)
9 diff
(99.2 %id)
AA249351   .d 1278 to 1641 1 to 361       361/362
(99 %)
5 diff
(98.7 %id)
DA879836 Prostate .d 3606 to 4185 2 to 581   tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
DB330286 Prostate .d 4840 to 5374 536 to 1   tiling clone,   536/536
(100 %)
1 diff
(99.9 %id)
BQ719373 sympathetic trunk .d 4981 to 5864 1 to 886       886/890
(99 %)
7 diff
(99.3 %id)
AA883193 pooled .d 5001 to 5377 381 to 5   tiling clone,   377/381
(98 %)
0 diff
(100 %id)
BP394936 pancreatic islet .d 5055 to 5235 1 to 182     Submitted on the opposite strand 182/184
(98 %)
4 diff
(97.9 %id)
CD556275 Blood vessels - aorta, basilar and artery .d 5333 to 5970 1 to 639   tiling clone,   639/777
(82 %)
11 diff
(98.6 %id)
AI761915 pooled .d 5404 to 5917 513 to 1       513/513
(100 %)
3 diff
(99.5 %id)
AI313447 lung .d 5459 to 5912 454 to 1   tiling clone,   454/454
(100 %)
1 diff
(99.8 %id)
DA650534   .e 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
AK092562 Prostate Gene MYOCD, variant not shown       available from FLJ, This clone was ignored    
AK128608 trachea Gene MYOCD, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
DB329716 Prostate Gene MYOCD, variant not shown         This clone was ignored    
DA867638 Prostate Gene MYOCD, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI