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Gene MTX1P1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
398 supporting clones for gene MTX1P1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AL046212 testis .a 1 to 193 193 to 1   tiling clone, Submitted on the opposite strand 193/193
(100 %)
0 diff
(100 %id)
DA746695   .a 60 to 577 2 to 519   tiling clone, capped   518/518
(100 %)
0 diff
(100 %id)
AW881549 ovary .a 376 to 499 8 to 131       124/133
(93 %)
2 diff
(98.5 %id)
TI_153988015   .a 422 to 867 507 to 60       448/509
(88 %)
0 diff
(100 %id)
DB460365 testis .a 481 to 939 1 to 459   tiling clone,   459/459
(100 %)
1 diff
(99.8 %id)
AW204347   .a 486 to 866 381 to 1       381/381
(100 %)
1 diff
(99.8 %id)
NM_002455.3   .a 506 to 2137 1 to 1632 exact RefSeq,   1632/1632
(100 %)
0 diff
(100 %id)
BG772057 testis .a 590 to 1329 1 to 740   tiling clone,   740/740
(100 %)
5 diff
(99.4 %id)
BG702357 brain, hippocampus .a 631 to 1500 1 to 866       866/1129
(76 %)
38 diff
(96.7 %id)
BE394487 endometrium, adenocarcinoma cell line, uterus .a 760 to 1330 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
BP210993 cerebellum .a 1031 to 1608 1 to 578       578/578
(100 %)
2 diff
(99.7 %id)
BM829502 Ascites, stomach .a 1034 to 1502 1 to 469       469/469
(100 %)
0 diff
(100 %id)
TI_45211315   .a 1036 to 1764 113 to 834       722/835
(86 %)
15 diff
(98.3 %id)
DT215812 brain .a 1039 to 1684 1 to 646       646/646
(100 %)
0 diff
(100 %id)
BP335357 coronary artery .a 1040 to 1620 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BP330342 rectum .a 1041 to 1621 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BG610907 adenocarcinoma, Prostate .a 1042 to 1787 1 to 745       745/745
(100 %)
7 diff
(99.1 %id)
BP320231 placenta .a 1043 to 1621 1 to 579       579/581
(99 %)
2 diff
(99.7 %id)
BP355788   .a 1043 to 1622 1 to 582       582/582
(100 %)
6 diff
(99.0 %id)
CN390106 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1044 to 1770 1 to 725       725/725
(100 %)
6 diff
(99.2 %id)
CB990470 Human Placenta, placenta .a 1045 to 1787 28 to 771       744/774
(96 %)
9 diff
(98.9 %id)
BM788159 Ascites, stomach .a 1045 to 1611 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
BI601757 brain, hypothalamus .a 1046 to 1764 1 to 713       713/714
(99 %)
12 diff
(98.4 %id)
DN998251 breast cancer, Mammary gland (cancer tissue) .a 1046 to 1646 1 to 601       601/601
(100 %)
5 diff
(99.2 %id)
CN390105 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1047 to 1795 1 to 751       751/779
(96 %)
8 diff
(99.0 %id)
BQ957644 large cell carcinoma, lung .a 1049 to 1951 1 to 916       916/916
(100 %)
23 diff
(97.5 %id)
BI255365 cervical carcinoma cell line, cervix .a 1050 to 1642 1 to 600       600/836
(71 %)
16 diff
(98.1 %id)
BU190277 melanotic melanoma, cell line, skin .a 1051 to 1797 1 to 755       755/940
(80 %)
22 diff
(97.7 %id)
BQ676954 melanotic melanoma, cell line, skin .a 1051 to 1650 1 to 601       601/1012
(59 %)
14 diff
(98.7 %id)
BU157369 melanotic melanoma, cell line, skin .a 1051 to 1876 1 to 834       833/949
(87 %)
28 diff
(97.1 %id)
DT218977 brain .a 1052 to 1731 1 to 680       680/680
(100 %)
0 diff
(100 %id)
BM561462 blood, natural killer cells, cell line .a 1052 to 1714 92 to 758       667/1182
(56 %)
28 diff
(97.7 %id)
CR982677 T-Lymphocytes .a 1052 to 1685 1 to 634       634/634
(100 %)
0 diff
(100 %id)
CD614838   .a 1053 to 1786 7 to 744       738/744
(99 %)
13 diff
(98.3 %id)
BG331072 large cell carcinoma, lung .a 1053 to 1868 1 to 814       812/916
(88 %)
31 diff
(96.7 %id)
TI_59394113   .a 1053 to 1835 90 to 877       788/789
(99 %)
10 diff
(98.8 %id)
TI_154190205   .a 1053 to 1807 49 to 801       753/1006
(74 %)
7 diff
(99.4 %id)
CR605982 HeLa cells Cot 25-normalized .a 1054 to 2138 1 to 1085   tiling clone,   1085/1085
(100 %)
0 diff
(100 %id)
CR614718 B cells (Ramos cell line) Cot 25-normalized .a 1054 to 2103 1 to 1050       1050/1050
(100 %)
0 diff
(100 %id)
BX343358   .a 1054 to 2083 1 to 1028   fully sequenced,   1028/1028
(100 %)
29 diff
(97.2 %id)
BG331005 large cell carcinoma, lung .a 1054 to 1863 1 to 809       809/976
(82 %)
26 diff
(97.4 %id)
BG741441 skin .a 1054 to 1792 1 to 738       738/739
(99 %)
2 diff
(99.8 %id)
BU838169 melanotic melanoma, cell line, skin .a 1054 to 1864 1 to 816       816/817
(99 %)
8 diff
(99.1 %id)
BQ682983 melanotic melanoma, cell line, skin .a 1054 to 1827 1 to 773       773/935
(82 %)
10 diff
(99.0 %id)
BQ676410 melanotic melanoma, cell line, skin .a 1054 to 1910 1 to 858       858/938
(91 %)
23 diff
(97.6 %id)
BQ680982 melanotic melanoma, cell line, skin .a 1054 to 1803 1 to 751       751/869
(86 %)
5 diff
(99.5 %id)
BQ684582 melanotic melanoma, cell line, skin .a 1054 to 1803 1 to 754       754/899
(83 %)
10 diff
(98.9 %id)
BQ678598 melanotic melanoma, cell line, skin .a 1054 to 1874 1 to 829       829/998
(83 %)
16 diff
(98.4 %id)
BU552879 ovary, teratocarcinoma, cell line .a 1054 to 1966 1 to 913       913/913
(100 %)
9 diff
(99.1 %id)
BG178626 adenocarcinoma, cell line, Prostate .a 1055 to 1754 1 to 701       701/956
(73 %)
25 diff
(97.4 %id)
BM016495 breast, mammary adenocarcinoma, cell line .a 1055 to 1835 1 to 786       786/787
(99 %)
10 diff
(98.8 %id)
BM020338 astrocytoma grade IV, cell line, brain .a 1055 to 1764 1 to 710       710/712
(99 %)
6 diff
(99.2 %id)
BQ670031 epidermoid carcinoma, cell line, salivary gland .a 1055 to 1845 1 to 794       794/875
(90 %)
10 diff
(98.9 %id)
CX164748 human embryonic stem cells differentiated toan early endodermal cell type .a 1055 to 1820 1 to 766       766/766
(100 %)
0 diff
(100 %id)
CF127091 Chondrosarcoma Lung Metastasis cell lines, lung .a 1055 to 1807 1 to 751       751/763
(98 %)
7 diff
(99.1 %id)
CB132023 Liver .a 1055 to 1690 1 to 636       636/636
(100 %)
0 diff
(100 %id)
CR991489 T-Lymphocytes .a 1055 to 1880 1 to 829       827/829
(99 %)
5 diff
(99.4 %id)
CD614841   .a 1056 to 1715 1 to 661       661/661
(100 %)
3 diff
(99.6 %id)
BG395078 eye, retinoblastoma .a 1056 to 1724 1 to 667       667/667
(100 %)
8 diff
(98.9 %id)
BG475331 melanotic melanoma, skin .a 1056 to 1804 1 to 749       749/867
(86 %)
22 diff
(97.5 %id)
BG473801 eye, retinoblastoma .a 1056 to 1639 1 to 594       594/977
(60 %)
24 diff
(97.6 %id)
BG750270 eye, normal pigmented retinal epithelium .a 1056 to 1856 1 to 801       801/802
(99 %)
8 diff
(99.1 %id)
BI195236 brain, neuroblastoma .a 1056 to 1787 1 to 748       714/755
(94 %)
36 diff
(95.3 %id)
BQ108552 astrocytoma grade IV, cell line, brain .a 1056 to 1768 1 to 714       714/714
(100 %)
3 diff
(99.6 %id)
BU164949 eye, retinoblastoma .a 1056 to 1833 1 to 790       787/874
(90 %)
14 diff
(98.4 %id)
BQ720863 sympathetic trunk .a 1056 to 1893 1 to 844       844/857
(98 %)
9 diff
(99.0 %id)
TI_59391123   .a 1056 to 1764 95 to 803       709/711
(99 %)
5 diff
(99.3 %id)
CD614846   .a 1057 to 1757 12 to 712       701/712
(98 %)
13 diff
(98.2 %id)
CD614847   .a 1057 to 1756 11 to 711       701/711
(98 %)
14 diff
(98.1 %id)
CN390100 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1057 to 1645 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
BE410839 choriocarcinoma, placenta .a 1057 to 1770 13 to 724       712/728
(97 %)
17 diff
(97.7 %id)
BF311975 brain, neuroblastoma .a 1057 to 1642 1 to 585       585/585
(100 %)
2 diff
(99.7 %id)
BM699265 eye, fetal eyes .a 1057 to 1673 1 to 617   fully sequenced,   617/617
(100 %)
0 diff
(100 %id)
BQ055322 lymph, lymphoma, cell line .a 1058 to 1805 9 to 762       754/1060
(71 %)
16 diff
(98.5 %id)
BU196944 ductal carcinoma, cell line, Pancreas .a 1058 to 1909 1 to 859       859/903
(95 %)
13 diff
(98.6 %id)
BQ892922 ductal carcinoma, cell line, Pancreas .a 1058 to 1961 1 to 907       907/907
(100 %)
9 diff
(99.1 %id)
TI_57145847   .a 1058 to 1974 67 to 983       917/983
(93 %)
13 diff
(98.7 %id)
AX775989   .a 1059 to 2123 1 to 1065       1065/1065
(100 %)
0 diff
(100 %id)
BQ942512 large cell carcinoma, lung .a 1059 to 1887 1 to 841       839/989
(84 %)
28 diff
(97.2 %id)
BG757968 B-cells, primary B-cells from tonsils (cell line) .a 1060 to 1919 1 to 861       861/863
(99 %)
13 diff
(98.5 %id)
BM728858 eye, fetal eye .a 1060 to 1607 1 to 547   fully sequenced,   547/547
(100 %)
1 diff
(99.9 %id)
AW160838 brain, frontal lobe .a 1061 to 1769 1 to 706       706/706
(100 %)
18 diff
(97.5 %id)
BI758952 pooled colon, kidney, stomach .a 1061 to 1974 1 to 914       914/914
(100 %)
8 diff
(99.2 %id)
TI_154189035   .a 1061 to 2014 49 to 977       929/1000
(92 %)
30 diff
(97.0 %id)
BM469657 lymph, lymphoma, cell line .a 1062 to 1791 1 to 736       736/945
(77 %)
8 diff
(99.2 %id)
CR591813 Placenta Cot 25-normalized .a 1063 to 2122 1 to 1060       1060/1060
(100 %)
0 diff
(100 %id)
BX377460 Placenta Cot 25-normalized .a 1063 to 2122 1 to 1049   fully sequenced,   1049/1049
(100 %)
15 diff
(98.6 %id)
CF128887 Chondrosarcoma Lung Metastasis cell lines, lung .a 1063 to 1782 1 to 719       719/719
(100 %)
1 diff
(99.9 %id)
BF969004 adrenal cortex carcinoma, cell line, adrenal gland .a 1064 to 1881 1 to 821       821/903
(90 %)
19 diff
(97.9 %id)
CN390098 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1065 to 1740 6 to 681       676/681
(99 %)
6 diff
(99.2 %id)
CD614840   .a 1066 to 1797 1 to 732       732/733
(99 %)
8 diff
(99.0 %id)
CD614843   .a 1066 to 1692 1 to 631       631/631
(100 %)
12 diff
(98.1 %id)
BM811400 ovary (pool of 3) .a 1066 to 1987 14 to 941       928/1059
(87 %)
23 diff
(97.9 %id)
CF130973 Chondrosarcoma Lung Metastasis cell lines, lung .a 1070 to 1807 1 to 736       736/754
(97 %)
7 diff
(99.1 %id)
TI_154193726   .a 1070 to 1923 51 to 889       839/994
(84 %)
21 diff
(97.9 %id)
CD614849   .a 1071 to 1731 1 to 664       664/664
(100 %)
14 diff
(97.9 %id)
CR619225 Neuroblastoma Cot 25-normalized .a 1072 to 2122 1 to 1051       1051/1051
(100 %)
0 diff
(100 %id)
AL524250 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1072 to 1673 1 to 602   fully sequenced,   602/602
(100 %)
0 diff
(100 %id)
BQ679472 melanotic melanoma, cell line, skin .a 1072 to 1736 1 to 666       666/883
(75 %)
9 diff
(99.0 %id)
AW951099   .a 1073 to 1634 1 to 559       559/563
(99 %)
15 diff
(97.4 %id)
BE867155 adenocarcinoma, colon .a 1073 to 1752 1 to 698       696/870
(80 %)
43 diff
(95.1 %id)
BE797544 lung, small cell carcinoma .a 1073 to 1767 1 to 695       695/695
(100 %)
0 diff
(100 %id)
BE390677 endometrium, adenocarcinoma cell line, uterus .a 1074 to 1719 1 to 643       643/786
(81 %)
15 diff
(98.1 %id)
BF036483 adenocarcinoma, ovary .a 1074 to 1802 1 to 724       724/726
(99 %)
10 diff
(98.7 %id)
BE907424 epithelioid carcinoma, Pancreas .a 1074 to 1812 1 to 732       732/1041
(70 %)
20 diff
(98.1 %id)
BE796317 lung, small cell carcinoma .a 1074 to 1787 1 to 713       713/714
(99 %)
2 diff
(99.8 %id)
BF026649 melanotic melanoma, skin .a 1074 to 1631 1 to 563       563/953
(59 %)
16 diff
(98.4 %id)
BE275120 melanotic melanoma, skin .a 1076 to 1860 1 to 781       781/925
(84 %)
13 diff
(98.6 %id)
BE265389 lung, small cell carcinoma .a 1076 to 1624 1 to 549       549/549
(100 %)
2 diff
(99.7 %id)
BF125752 melanotic melanoma, skin .a 1076 to 1795 1 to 727       727/967
(75 %)
19 diff
(98.1 %id)
BF025914 melanotic melanoma, skin .a 1077 to 1885 1 to 801       801/954
(83 %)
27 diff
(97.2 %id)
BE902728 choriocarcinoma, placenta .a 1077 to 1887 1 to 803       805/984
(81 %)
14 diff
(98.6 %id)
CN390099 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1078 to 1831 1 to 753       753/753
(100 %)
2 diff
(99.8 %id)
BQ649053 hepatocellular carcinoma, cell line, Liver .a 1079 to 1796 1 to 718       718/1000
(71 %)
24 diff
(97.6 %id)
BG023985 duodenal adenocarcinoma, cell line, small intestine .a 1080 to 1803 1 to 716       716/928
(77 %)
18 diff
(98.1 %id)
BM046056 carcinoma, cell line, Prostate .a 1083 to 1876 1 to 800       798/801
(99 %)
16 diff
(98.1 %id)
BI196412 brain, neuroblastoma .a 1084 to 1874 1 to 791       791/792
(99 %)
6 diff
(99.3 %id)
BG938637 Bone, Hip .a 1084 to 1703 9 to 628       620/628
(98 %)
0 diff
(100 %id)
BF036690 adenocarcinoma, ovary .a 1086 to 1795 1 to 704       704/945
(74 %)
21 diff
(97.8 %id)
BE407524 choriocarcinoma, placenta .a 1089 to 1667 1 to 579       579/579
(100 %)
5 diff
(99.2 %id)
TI_154189140   .a 1095 to 1946 38 to 886   AAA   847/978
(86 %)
25 diff
(97.5 %id)
CR737281 germinal center B cell .a 1096 to 1834 1 to 739       739/739
(100 %)
2 diff
(99.8 %id)
BF528570 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1097 to 1840 1 to 739       739/741
(99 %)
8 diff
(99.0 %id)
CF126185 Chondrosarcoma Lung Metastasis cell lines, lung .a 1097 to 1707 1 to 613       613/613
(100 %)
3 diff
(99.6 %id)
BE294170 muscle, rhabdomyosarcoma .a 1104 to 1658 1 to 555       555/555
(100 %)
0 diff
(100 %id)
AA488808 germinal center B cell .a 1110 to 1576 1 to 465       465/465
(100 %)
6 diff
(98.8 %id)
W88726 liver and spleen .a 1150 to 1611 1 to 464       464/464
(100 %)
8 diff
(98.3 %id)
BX283951 Spleen .a 1178 to 1676 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
BM008127 Spleen .a 1178 to 2036 1 to 865       865/865
(100 %)
17 diff
(98.1 %id)
TI_59383607   .a 1179 to 2036 103 to 966       864/864
(100 %)
16 diff
(98.2 %id)
BI457552 epithelioid carcinoma cell line, Pancreas .a 1183 to 2075 1 to 892       892/915
(97 %)
48 diff
(94.8 %id)
TI_45133658   .a 1184 to 2075 61 to 951       891/914
(97 %)
47 diff
(94.9 %id)
BQ671021 epidermoid carcinoma, cell line, salivary gland .a 1196 to 2117 1 to 929       929/930
(99 %)
15 diff
(98.4 %id)
BF036797 adenocarcinoma, ovary .a 1204 to 1895 1 to 695       693/695
(99 %)
19 diff
(97.3 %id)
BM930966 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1234 to 1673 1 to 440   fully sequenced,   440/440
(100 %)
0 diff
(100 %id)
CD614848   .a 1251 to 2035 802 to 16       787/802
(98 %)
2 diff
(99.8 %id)
CD614842   .a 1253 to 2028 780 to 1       780/780
(100 %)
9 diff
(98.9 %id)
CN390097 embryonic stem cells, cell lines H1, H7, andH9 .a 1259 to 1642 1 to 384       384/389
(98 %)
2 diff
(99.5 %id)
BX377459 Placenta Cot 25-normalized .a 1259 to 2103 848 to 6   fully sequenced,   843/848
(99 %)
1 diff
(99.9 %id)
BX343357   .a 1259 to 2103 859 to 1   fully sequenced,   519/519
(100 %)
29 diff
(94.5 %id)
TI_157601735   .a 1278 to 2136 918 to 53   AAA   866/914
(94 %)
25 diff
(97.3 %id)
BP247492 Kidney .a 1289 to 1885 1 to 598       598/598
(100 %)
2 diff
(99.7 %id)
CD614845   .a 1306 to 2035 747 to 18       730/754
(96 %)
12 diff
(98.5 %id)
BG325151 Kidney, renal cell adenocarcinoma .a 1336 to 1937 1 to 602       602/602
(100 %)
1 diff
(99.9 %id)
CD614839   .a 1355 to 2020 667 to 1       667/667
(100 %)
4 diff
(99.5 %id)
N98546 lung .a 1366 to 1748 1 to 381   fully sequenced,   381/381
(100 %)
9 diff
(97.7 %id)
CA309197 Alveolar Macrophage, lung .a 1371 to 2136 780 to 16   AAA   765/765
(100 %)
1 diff
(99.9 %id)
BU742762 eye, fetal eye .a 1577 to 2136 579 to 19   fully sequenced, AAA   561/561
(100 %)
1 diff
(99.9 %id)
AL562328 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1612 to 2122 509 to 1   fully sequenced,   509/509
(100 %)
21 diff
(95.9 %id)
BM669480 eye, fetal eyes .a 1612 to 2136 543 to 19   fully sequenced, AAA   525/525
(100 %)
0 diff
(100 %id)
BM684464 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1612 to 2136 543 to 19   fully sequenced, AAA   525/525
(100 %)
0 diff
(100 %id)
AA489059 germinal center B cell .a 1652 to 2136 501 to 19   AAA   483/483
(100 %)
3 diff
(99.4 %id)
N69964 lung .a 1718 to 2136 423 to 1   fully sequenced,   423/423
(100 %)
22 diff
(94.8 %id)
W88727 liver and spleen .a 1745 to 2136 389 to 1       389/389
(100 %)
4 diff
(99.0 %id)
BG717732 testis .b 1 to 713 1 to 708       708/709
(99 %)
23 diff
(96.8 %id)
DB058260 testis .b 3 to 490 2 to 489   tiling clone, capped   488/488
(100 %)
1 diff
(99.8 %id)
NM_198883.2   .b 6 to 1557 1 to 1552 exact RefSeq,   1552/1552
(100 %)
1 diff
(100.0 %id)
AI084516   .b 87 to 184 98 to 1       98/98
(100 %)
0 diff
(100 %id)
DB451498 testis .b 98 to 594 1 to 497       497/497
(100 %)
2 diff
(99.6 %id)
BC001906 Placenta, choriocarcinoma .b 104 to 1543 1 to 1440 T63S tiling clone, available from MGC, AAA   1440/1440
(100 %)
1 diff
(100.0 %id)
BE278285 choriocarcinoma, placenta .b 123 to 785 1 to 674       674/689
(97 %)
19 diff
(97.3 %id)
DB495792 hypothalamus .b 243 to 701 1 to 458       458/458
(100 %)
8 diff
(98.3 %id)
BQ420450 embryonal carcinoma, cell line, testis .b 539 to 1548 12 to 1035       1024/1128
(90 %)
38 diff
(96.7 %id)
AA352330   .b 554 to 893 1 to 340       340/340
(100 %)
11 diff
(96.8 %id)
BG025227 lymph, lymphoma, cell line .b 555 to 1331 1 to 770       770/879
(87 %)
20 diff
(97.8 %id)
BM705893 eye, lens .b 556 to 939 1 to 384       384/384
(100 %)
0 diff
(100 %id)
BQ643956 hepatocellular carcinoma, cell line, Liver .b 557 to 1316 1 to 766       766/879
(87 %)
11 diff
(98.8 %id)
BQ896701 hepatocellular carcinoma, cell line, Liver .b 557 to 1410 1 to 862       862/897
(96 %)
17 diff
(98.2 %id)
CV025973 mixed .b 559 to 1181 1 to 623       623/623
(100 %)
0 diff
(100 %id)
TI_1948085346   .b 559 to 1179 139 to 759       621/1442
(43 %)
14 diff
(99.1 %id)
TI_1948085422   .b 559 to 1044 131 to 619       489/1354
(36 %)
21 diff
(98.5 %id)
TI_1948085592   .b 559 to 1183 130 to 764       635/1362
(46 %)
36 diff
(97.4 %id)
BX099640 anaplastic oligodendroglioma, brain .b 563 to 1066 1 to 504       504/504
(100 %)
0 diff
(100 %id)
BM012322 brain, neuroblastoma, cell line .b 567 to 1302 1 to 741       741/741
(100 %)
9 diff
(98.8 %id)
TI_59381531   .b 567 to 1302 98 to 838       741/741
(100 %)
9 diff
(98.8 %id)
BQ937983 leiomyosarcoma, uterus .b 581 to 1484 1 to 911       911/933
(97 %)
19 diff
(98.0 %id)
TI_149311739   .b 780 to 1543 848 to 87   AAA   762/966
(78 %)
7 diff
(99.3 %id)
CR611714 Neuroblastoma Cot 10-normalized .b 789 to 1544 1 to 756   tiling clone,   756/756
(100 %)
0 diff
(100 %id)
AL519967 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 789 to 1544 1 to 757   fully sequenced,   757/757
(100 %)
1 diff
(99.9 %id)
CB160892 Liver .b 800 to 1304 1 to 505       505/505
(100 %)
0 diff
(100 %id)
AI193094 lung .b 804 to 1416 1 to 613     Submitted on the opposite strand 613/613
(100 %)
1 diff
(99.9 %id)
AA232724 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 806 to 1142 1 to 336   fully sequenced,   336/336
(100 %)
5 diff
(98.6 %id)
CR608869 Neuroblastoma Cot 10-normalized .b 816 to 1513 1 to 698       698/698
(100 %)
0 diff
(100 %id)
BM977517 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 819 to 1543 742 to 19   AAA   724/724
(100 %)
2 diff
(99.8 %id)
AL519966 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 1019 to 1509 490 to 1   fully sequenced,   490/490
(100 %)
4 diff
(99.2 %id)
BM667867 eye, lens .b 1071 to 1543 491 to 19   AAA   473/473
(100 %)
0 diff
(100 %id)
AA236517 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1112 to 1543 431 to 1   fully sequenced,   431/431
(100 %)
1 diff
(99.8 %id)
BP286721 lung .c 1 to 581 1 to 582   tiling clone,   582/582
(100 %)
3 diff
(99.5 %id)
BP320569 placenta .c 6 to 588 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
AL035848 brain .c 7 to 369 1 to 363       363/363
(100 %)
1 diff
(99.8 %id)
BP355688   .c 7 to 585 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
DA790896 brain .c 8 to 529 2 to 523   capped   522/522
(100 %)
6 diff
(98.9 %id)
CB130016 Liver .c 9 to 503 1 to 495       495/495
(100 %)
0 diff
(100 %id)
BM765207 Ascites, stomach .c 9 to 501 1 to 493       493/493
(100 %)
3 diff
(99.4 %id)
BM773056 Ascites, stomach .c 9 to 112 1 to 104       104/104
(100 %)
0 diff
(100 %id)
BM773076 Ascites, stomach .c 9 to 388 1 to 379       379/379
(100 %)
1 diff
(99.8 %id)
BM752637 Ascites, stomach .c 10 to 464 1 to 457       457/457
(100 %)
4 diff
(99.2 %id)
DB470278 hippocampus .c 11 to 458 1 to 450       450/450
(100 %)
3 diff
(99.4 %id)
DB495599 hypothalamus .c 16 to 514 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
W52532 senescent fibroblast .c 17 to 528 1 to 515       515/555
(92 %)
12 diff
(97.9 %id)
BQ220282 large cell carcinoma, lung .c 17 to 497 52 to 538       487/822
(59 %)
21 diff
(97.5 %id)
ES313123 beard hair, skin .c 18 to 156 1 to 137       137/137
(100 %)
3 diff
(97.9 %id)
CN390104 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 20 to 542 1 to 524       524/524
(100 %)
4 diff
(99.3 %id)
EC521275 Prostate .c 21 to 114 1 to 92       92/94
(97 %)
5 diff
(94.7 %id)
H84732 eye, retina .c 21 to 343 1 to 326       326/340
(95 %)
12 diff
(96.5 %id)
BM913887 astrocytoma grade IV, cell line, brain .c 21 to 337 1 to 317       317/1287
(24 %)
6 diff
(99.6 %id)
BM910660 astrocytoma grade IV, cell line, brain .c 22 to 535 1 to 511       511/1210
(42 %)
12 diff
(99.1 %id)
CB117460 Liver .c 22 to 177 1 to 156       156/162
(96 %)
3 diff
(98.2 %id)
BG331295 large cell carcinoma, lung .c 26 to 529 1 to 499       499/922
(54 %)
16 diff
(98.3 %id)
BE259588 brain, neuroblastoma .c 40 to 560 1 to 520   tiling clone,   520/521
(99 %)
1 diff
(99.9 %id)
AA357606 Prostate .c 41 to 341 1 to 304       304/304
(100 %)
7 diff
(97.7 %id)
AW958845   .c 42 to 662 1 to 624       623/625
(99 %)
16 diff
(97.5 %id)
R48632 breast .c 44 to 381 1 to 343       343/399
(85 %)
11 diff
(97.3 %id)
CN390103 embryonic stem cells, DMSO-treated H9 cellline .c 61 to 325 1 to 265       265/265
(100 %)
0 diff
(100 %id)
CU445051 epidermis .c 121 to 254 140 to 9     Submitted on the opposite strand 131/140
(93 %)
3 diff
(97.9 %id)
BE702617 nervous_normal .c 222 to 504 283 to 1       283/283
(100 %)
1 diff
(99.7 %id)
BU552401 carcinoma, cell line, Prostate .c 528 to 1106 36 to 614   tiling clone,   579/617
(93 %)
1 diff
(99.9 %id)
AI417152 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 536 to 1100 578 to 14   AAA   565/565
(100 %)
6 diff
(99.0 %id)
AW516761 cervix, tumor .c 537 to 971 435 to 1       435/436
(99 %)
13 diff
(97.1 %id)
AI094605 brain, glioblastoma (pooled) .c 542 to 1101 555 to 1       555/555
(100 %)
9 diff
(98.4 %id)
AI418844 brain, glioblastoma (pooled) .c 542 to 1100 559 to 1       559/559
(100 %)
0 diff
(100 %id)
BG232042 blood, lymphocyte .c 542 to 1101 567 to 8       560/567
(98 %)
14 diff
(97.6 %id)
AI022144 liver and spleen .c 564 to 1101 536 to 1       536/539
(99 %)
5 diff
(99.1 %id)
DB307407.
matches multiple genes
corpus callosum .c 565 to 1100 536 to 1     also hits gene momaya 536/536
(100 %)
1 diff
(99.9 %id)
AA743797 Kidney .c 581 to 1100 519 to 1       519/519
(100 %)
7 diff
(98.7 %id)
BM043451 carcinoma, cell line, Prostate .c 583 to 1101 1 to 519       519/537
(96 %)
4 diff
(99.3 %id)
BM046358 carcinoma, cell line, Prostate .c 583 to 1100 1 to 519   AAA   519/519
(100 %)
2 diff
(99.7 %id)
AI349338 lung .c 584 to 1099 517 to 1       517/517
(100 %)
3 diff
(99.5 %id)
AA916471 adenocarcinoma, colon .c 587 to 1100 513 to 1       513/513
(100 %)
10 diff
(98.1 %id)
AI017022 Kidney .c 587 to 1100 514 to 1       514/514
(100 %)
1 diff
(99.9 %id)
AI033554 liver and spleen .c 587 to 1100 514 to 1       514/514
(100 %)
4 diff
(99.3 %id)
AW956065   .c 593 to 1100 1 to 508   AAA   508/508
(100 %)
1 diff
(99.9 %id)
T28365 colon, epididymis .c 596 to 974 1 to 380       380/380
(100 %)
6 diff
(98.5 %id)
BP391214 pancreatic islet .c 601 to 1100 1 to 500     Submitted on the opposite strand 500/500
(100 %)
0 diff
(100 %id)
TI_154190433   .c 1098 to 1752 705 to 52     Submitted on the opposite strand 654/964
(67 %)
0 diff
(100 %id)
D20299   .c 1099 to 1326 227 to 1       227/229
(99 %)
2 diff
(99.2 %id)
BE241461 leukopheresis .c 1103 to 1374 1 to 272       272/272
(100 %)
3 diff
(98.9 %id)
DB353422   .c 1104 to 1693 1 to 582   tiling clone, Submitted on the opposite strand 582/588
(98 %)
27 diff
(95.5 %id)
DB531156 hippocampus .c 1104 to 1524 420 to 1       420/420
(100 %)
3 diff
(99.3 %id)
DB534532.
matches multiple genes
hippocampus .c 1105 to 1528 424 to 1     also hits gene GBA 424/424
(100 %)
2 diff
(99.6 %id)
AW372441 breast .c 1115 to 1329 1 to 213       213/213
(100 %)
2 diff
(99.1 %id)
BF736238 bladder_tumor .c 1119 to 1664 20 to 563       544/563
(96 %)
6 diff
(99.0 %id)
BP388140 pancreatic islet .c 1123 to 1391 269 to 1       269/269
(100 %)
7 diff
(97.4 %id)
AA714887 Ewing's sarcoma .c 1124 to 1491 1 to 366       366/373
(98 %)
8 diff
(97.9 %id)
BE832954 ovary .c 1220 to 1403 20 to 201       182/201
(90 %)
6 diff
(97.1 %id)
BE676922 follicular carcinoma, thyroid .c 1221 to 1703 506 to 24       483/506
(95 %)
0 diff
(100 %id)
BE081068 breast .c 1332 to 1665 1 to 334       334/334
(100 %)
2 diff
(99.5 %id)
BF948407 nervous_normal .c 1347 to 1792 25 to 471   tiling clone,   447/472
(94 %)
6 diff
(98.8 %id)
BF987527 placenta_normal .c 1437 to 1714 21 to 298       278/301
(92 %)
9 diff
(97.1 %id)
BF987511 placenta_normal .c 1438 to 1714 1 to 276   tiling clone,   276/279
(98 %)
12 diff
(95.7 %id)
AA393374   .d 1 to 486 1 to 483   tiling clone,   483/483
(100 %)
8 diff
(98.4 %id)
CA432247 cell lines, Enchondroma .d 199 to 943 761 to 19   AAA   743/761
(97 %)
2 diff
(99.8 %id)
AL521955 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .d 226 to 910 11 to 695       685/695
(98 %)
6 diff
(99.2 %id)
BQ051223 large cell carcinoma, lung .d 227 to 955 1 to 729       729/737
(98 %)
5 diff
(99.4 %id)
CD366436 Alveolar Macrophage, lung .d 232 to 943 729 to 19   AAA   711/711
(100 %)
3 diff
(99.6 %id)
TI_59394367   .d 233 to 943 87 to 797   tiling clone, AAA   711/711
(100 %)
0 diff
(100 %id)
BM015991 breast, mammary adenocarcinoma, cell line .d 234 to 943 1 to 710   AAA   710/710
(100 %)
0 diff
(100 %id)
AA789255   .d 235 to 944 712 to 9       704/712
(98 %)
17 diff
(97.7 %id)
TI_151725022   .d 242 to 943 796 to 95   AAA   702/888
(79 %)
29 diff
(96.8 %id)
AW753483 colon .d 243 to 611 1 to 372       372/379
(98 %)
26 diff
(93.2 %id)
BF038070 adenocarcinoma, ovary .d 247 to 932 1 to 682       682/685
(99 %)
16 diff
(97.7 %id)
CB162692 Liver .d 251 to 788 1 to 537       537/537
(100 %)
1 diff
(99.9 %id)
TI_149304020   .d 251 to 943 789 to 97   AAA   693/694
(99 %)
1 diff
(99.9 %id)
CN390101 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 259 to 773 1 to 515       515/515
(100 %)
4 diff
(99.3 %id)
BQ005454 Chondrosarcoma, Left Pelvis .d 260 to 943 700 to 19   AAA   682/682
(100 %)
2 diff
(99.8 %id)
CB851109 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 271 to 943 691 to 19   AAA   673/673
(100 %)
1 diff
(99.9 %id)
BE467069 carcinoid, lung .d 280 to 816 1 to 537     Submitted on the opposite strand 537/537
(100 %)
1 diff
(99.9 %id)
T87988 liver and spleen .d 281 to 635 1 to 357   fully sequenced,   357/357
(100 %)
7 diff
(98.1 %id)
BE467854 carcinoid, lung .d 281 to 816 1 to 536     Submitted on the opposite strand 536/536
(100 %)
0 diff
(100 %id)
CF529296 placenta .d 284 to 943 677 to 19   AAA   659/659
(100 %)
1 diff
(99.9 %id)
BQ003402 Chondrosarcoma, Left Pelvis .d 290 to 952 680 to 19   AAA   662/662
(100 %)
2 diff
(99.7 %id)
AA203314 liver and spleen .d 291 to 775 1 to 485       485/487
(99 %)
38 diff
(92.2 %id)
BG331037 large cell carcinoma, lung .d 297 to 943 1 to 654       654/858
(76 %)
12 diff
(98.7 %id)
BI827703 brain, medulla .d 306 to 945 1 to 640       640/677
(94 %)
2 diff
(99.8 %id)
TI_57171941   .d 306 to 945 93 to 732       640/965
(66 %)
8 diff
(99.2 %id)
BF686238 leiomyosarcoma cell line, uterus .d 315 to 935 1 to 620       620/621
(99 %)
3 diff
(99.6 %id)
AI002237 carcinoid, lung .d 317 to 690 1 to 368     Submitted on the opposite strand 368/368
(100 %)
9 diff
(97.6 %id)
AA625794   .d 325 to 944 619 to 4       616/619
(99 %)
20 diff
(96.8 %id)
AW406987 lymph .d 331 to 480 7 to 156   fully sequenced,   150/156
(96 %)
0 diff
(100 %id)
TI_154132920   .d 331 to 943 723 to 111   AAA   613/703
(87 %)
6 diff
(99.2 %id)
TI_154144843   .d 331 to 889 85 to 645       561/562
(99 %)
23 diff
(96.0 %id)
CA423662 cell lines, Chondrosarcoma .d 331 to 943 631 to 19   AAA   613/613
(100 %)
1 diff
(99.9 %id)
BQ020854 lung, Metastatic Chondrosarcoma .d 336 to 943 627 to 19   AAA   609/609
(100 %)
2 diff
(99.7 %id)
CA422509 cell lines, Chondrosarcoma .d 344 to 943 617 to 19   AAA   599/599
(100 %)
3 diff
(99.5 %id)
AA514240 colon .d 355 to 943 608 to 20   AAA   589/589
(100 %)
5 diff
(99.2 %id)
AI589296 adenocarcinoma, Pancreas .d 371 to 944 571 to 2       570/576
(98 %)
9 diff
(98.5 %id)
AI818257 adenocarcinoma, Pancreas .d 371 to 952 609 to 29   AAA   581/767
(75 %)
30 diff
(96.1 %id)
AW189811 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 371 to 943 575 to 1       575/689
(83 %)
23 diff
(96.7 %id)
CF129767 Chondrosarcoma Lung Metastasis cell lines, lung .d 371 to 941 8 to 579       572/579
(98 %)
12 diff
(98.0 %id)
TI_154191536   .d 371 to 942 58 to 630       573/584
(98 %)
13 diff
(97.8 %id)
CB528772 Aveolar Macrophage, lung .d 371 to 943 590 to 19   AAA   572/575
(99 %)
8 diff
(98.7 %id)
BQ020956 lung, Metastatic Chondrosarcoma .d 375 to 943 587 to 19   AAA   569/569
(100 %)
1 diff
(99.9 %id)
AW575422 lymph .d 419 to 943 541 to 18   fully sequenced, AAA   524/524
(100 %)
2 diff
(99.7 %id)
AI284377 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 442 to 943 499 to 1       499/503
(99 %)
21 diff
(95.9 %id)
AA812878   .d 450 to 944 496 to 3       494/501
(98 %)
7 diff
(98.7 %id)
AA813211   .d 450 to 944 501 to 3       499/518
(96 %)
26 diff
(95.0 %id)
BX406488 fetal liver, Liver .d 450 to 944 1 to 495   fully sequenced,   495/495
(100 %)
1 diff
(99.8 %id)
AA722540 heart .d 450 to 943 492 to 1       492/512
(96 %)
13 diff
(97.5 %id)
AA614120 adrenal adenoma, adrenal gland .d 450 to 942 492 to 1       492/548
(89 %)
3 diff
(99.5 %id)
AA931953 Kidney .d 450 to 945 496 to 1       496/515
(96 %)
12 diff
(97.7 %id)
AI016913   .d 450 to 944 496 to 3       494/496
(99 %)
3 diff
(99.4 %id)
AI041887 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 450 to 943 494 to 1       494/496
(99 %)
11 diff
(97.8 %id)
AI920787 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 450 to 943 508 to 15   AAA   494/502
(98 %)
8 diff
(98.5 %id)
BM548505 brain, hippocampus .d 467 to 943 10 to 486   AAA   477/486
(98 %)
7 diff
(98.6 %id)
AI015902   .d 469 to 944 478 to 6       473/478
(98 %)
6 diff
(98.8 %id)
AI241389 liver and spleen .d 472 to 960 493 to 5   tiling clone,   489/493
(99 %)
3 diff
(99.4 %id)
AI991337 colon, colonic mucosa from 3 patients with Crohn'sdisease .d 472 to 939 470 to 3       468/470
(99 %)
0 diff
(100 %id)
DB566660 hypothalamus .d 480 to 941 1 to 462     Submitted on the opposite strand 462/464
(99 %)
1 diff
(99.8 %id)
DB572004 hypothalamus .d 480 to 941 1 to 462     Submitted on the opposite strand 462/464
(99 %)
2 diff
(99.6 %id)
AA972497 colon, colon tumor .d 480 to 874 395 to 1       395/397
(99 %)
5 diff
(98.8 %id)
DB516964 testis .d 481 to 941 1 to 461     Submitted on the opposite strand 461/463
(99 %)
3 diff
(99.4 %id)
BQ012471 placenta .d 482 to 943 480 to 19   AAA   462/462
(100 %)
0 diff
(100 %id)
AI274066 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 488 to 944 459 to 3       457/460
(99 %)
4 diff
(99.2 %id)
AI347765 2 pooled tumors (clear cell type), Kidney .d 488 to 944 461 to 6       456/466
(97 %)
5 diff
(99.0 %id)
AI209007   .d 493 to 814 322 to 1       322/322
(100 %)
0 diff
(100 %id)
AA773425 lung, lung carcinoma .d 494 to 942 445 to 1       445/447
(99 %)
15 diff
(96.7 %id)
AI304800 adenocarcinoma, colon .d 496 to 943 448 to 1       448/454
(98 %)
5 diff
(98.9 %id)
AI359713 brain, glioblastoma (pooled) .d 496 to 943 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AI369773 anaplastic oligodendroglioma, brain .d 497 to 943 447 to 1       447/448
(99 %)
1 diff
(99.8 %id)
AW339023 adenocarcinoma, Pancreas .d 497 to 944 449 to 2       448/486
(92 %)
7 diff
(98.6 %id)
AI280974 adenocarcinoma, colon .d 500 to 955 462 to 7       456/529
(86 %)
4 diff
(99.3 %id)
AI445314 colon, moderately-differentiated adenocarcinoma .d 502 to 944 444 to 3       442/444
(99 %)
9 diff
(98.0 %id)
AA865100 germinal center B cell .d 505 to 901 393 to 1       393/393
(100 %)
8 diff
(98.0 %id)
DB525782 testis .d 507 to 943 1 to 437     Submitted on the opposite strand 437/437
(100 %)
0 diff
(100 %id)
DQ786325   .d 508 to 939 1 to 428       428/428
(100 %)
5 diff
(98.9 %id)
DB538377 hippocampus .d 508 to 941 1 to 434     Submitted on the opposite strand 434/436
(99 %)
4 diff
(99.1 %id)
DB566844 hypothalamus .d 508 to 952 1 to 446   AAA Submitted on the opposite strand 446/446
(100 %)
10 diff
(97.8 %id)
AA628672   .d 514 to 750 235 to 1       235/235
(100 %)
3 diff
(98.8 %id)
AI275000 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 514 to 943 446 to 17   AAA   430/430
(100 %)
17 diff
(96.1 %id)
BM987446 mixed .d 515 to 943 447 to 19   AAA   429/429
(100 %)
0 diff
(100 %id)
EC538385 Prostate .d 536 to 634 1 to 100       100/100
(100 %)
1 diff
(99.0 %id)
AI248391 liver and spleen .d 544 to 944 403 to 5       399/403
(99 %)
2 diff
(99.6 %id)
BM988744 lung, Lung Focal Fibrosis .d 546 to 943 416 to 19   AAA   398/398
(100 %)
1 diff
(99.8 %id)
AI168643 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 547 to 943 392 to 1       392/395
(99 %)
9 diff
(97.8 %id)
AW138536   .d 547 to 943 413 to 17   AAA   397/397
(100 %)
6 diff
(98.5 %id)
R00489 liver and spleen .d 550 to 939 405 to 9       397/413
(96 %)
5 diff
(98.8 %id)
AI244996 Kidney .d 553 to 943 391 to 1       391/391
(100 %)
0 diff
(100 %id)
AI932277 anaplastic oligodendroglioma, brain .d 565 to 943 377 to 1       377/377
(100 %)
7 diff
(98.2 %id)
AA807090 germinal center B cell .d 568 to 901 330 to 1       330/330
(100 %)
25 diff
(92.5 %id)
BP387056 pancreatic islet .d 570 to 930 1 to 361     Submitted on the opposite strand 361/365
(98 %)
2 diff
(99.5 %id)
T87895 liver and spleen .d 574 to 938 362 to 1   fully sequenced,   362/362
(100 %)
7 diff
(98.1 %id)
AW137175   .d 576 to 943 385 to 18   AAA   368/368
(100 %)
0 diff
(100 %id)
AA670347 whole brain .d 589 to 943 375 to 23   AAA   353/353
(100 %)
4 diff
(98.9 %id)
TI_149299561   .d 593 to 943 436 to 86   AAA   351/986
(35 %)
0 diff
(100 %id)
BM975874 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 593 to 943 369 to 19   AAA   351/368
(95 %)
0 diff
(100 %id)
AI204591   .d 603 to 944 346 to 7       340/351
(96 %)
0 diff
(100 %id)
AI915896 Kidney .d 604 to 944 344 to 6       339/344
(98 %)
0 diff
(100 %id)
AA358527 lung .d 605 to 943 337 to 1       337/337
(100 %)
1 diff
(99.8 %id)
AW418990 2 pooled tumors (clear cell type), Kidney .d 607 to 814 208 to 1       208/208
(100 %)
12 diff
(94.3 %id)
BG249793 hypernephroma, cell line, Kidney .d 641 to 943 1 to 303   AAA   303/303
(100 %)
0 diff
(100 %id)
AI678929 Prostate .d 644 to 814 171 to 1       171/181
(94 %)
7 diff
(96.2 %id)
AI867332 colon, colon tumor, RER+ .d 655 to 943 311 to 23   AAA   289/289
(100 %)
0 diff
(100 %id)
C00640   .d 678 to 943 1 to 265       265/265
(100 %)
1 diff
(99.7 %id)
BM988072 mixed .d 684 to 943 279 to 20       260/279
(93 %)
0 diff
(100 %id)
AI660252 colon, colonic mucosa from 5 ulcerative colitispatients .d 703 to 944 244 to 3       242/244
(99 %)
0 diff
(100 %id)
AA757280   .d 722 to 944 222 to 3       220/225
(97 %)
0 diff
(100 %id)
BX406487 fetal liver, Liver .d 741 to 903 161 to 1   fully sequenced,   161/161
(100 %)
0 diff
(100 %id)
BM990581 lung, Lung Focal Fibrosis .d 749 to 943 213 to 19   AAA   195/200
(97 %)
1 diff
(99.5 %id)
AI363950 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 754 to 935 184 to 1       184/184
(100 %)
2 diff
(99.0 %id)
AA917841 adenocarcinoma, colon .d 872 to 943 71 to 1       71/71
(100 %)
1 diff
(98.6 %id)
EC487597 Prostate .d 953 to 1049 11 to 105   tiling clone,   95/105
(90 %)
6 diff
(94.3 %id)
BI549703 brain, hippocampus .e 1 to 771 6 to 779 R68Q E174G E175G E176R L177A ... tiling clone,   774/965
(80 %)
19 diff
(98.1 %id)
TI_44171539   .e 1 to 771 90 to 863 R68Q E174G E175G E176R L177A ...     774/1049
(73 %)
19 diff
(98.2 %id)
AI917317 pooled germ cell tumors .f 1 to 916 348 to 1 S2L L4S E5G E6I K7V ... tiling clone, Suspected internal deletion 348/348
(100 %)
0 diff
(100 %id)
BF057234 pooled germ cell tumors .f 1 to 917 349 to 1 S2L L4S E5G E6I K7V ... tiling clone, Suspected internal deletion 349/349
(100 %)
0 diff
(100 %id)
DA630376 Kidney .g 1 to 587 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DA920455 small intestine .g 2 to 569 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB143488 thymus .g 10 to 473 2 to 465   capped   464/464
(100 %)
1 diff
(99.8 %id)
DA017476 adrenal gland .g 12 to 465 2 to 455   capped   454/454
(100 %)
0 diff
(100 %id)
DA310632 hippocampus .g 12 to 595 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA806642 brain .g 12 to 581 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA948855 Spleen .g 12 to 569 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DB272911 uterus .g 13 to 579 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
TI_57199815   .g 15 to 811 59 to 859       801/860
(93 %)
12 diff
(98.7 %id)
TI_57171979   .g 19 to 860 31 to 875       845/877
(96 %)
20 diff
(97.8 %id)
DA943395 Spleen .g 19 to 595 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
BI818839 pooled brain, lung, testis .g 20 to 811 1 to 796       796/797
(99 %)
7 diff
(99.2 %id)
BC035616 Brain, adult medulla .g 24 to 2601 1 to 2578 L180P tiling clone, available from MGC, AAA   2578/2578
(100 %)
1 diff
(100.0 %id)
BI827725 brain, medulla .g 24 to 860 1 to 840   available from MGC,   840/842
(99 %)
16 diff
(98.1 %id)
DB015595 esophageal, tumor tissue .g 49 to 611 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA847853 placenta .g 101 to 652 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BG986959 head_neck .g 119 to 302 1 to 182       182/182
(100 %)
16 diff
(91.3 %id)
DA039446 bladder .g 178 to 745 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA678195   .g 194 to 780 2 to 588   capped   587/587
(100 %)
4 diff
(99.4 %id)
BE720466 head_neck .g 430 to 757 14 to 342       329/342
(96 %)
6 diff
(98.3 %id)
DB046138 testis .g 482 to 1057 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DB029657 testis .g 509 to 1076 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB021990 testis .g 510 to 963 2 to 455   capped   454/454
(100 %)
0 diff
(100 %id)
DB176822 kidney, tumor tissue .g 582 to 1125 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BF883100 lung_tumor .g 664 to 1022 361 to 1     Submitted on the opposite strand 361/361
(100 %)
9 diff
(97.6 %id)
AA331644 Embryo, 8 weeks .g 699 to 1018 1 to 323       323/323
(100 %)
2 diff
(99.4 %id)
AW965266   .g 700 to 1207 1 to 507       507/618
(82 %)
13 diff
(97.9 %id)
AW965268   .g 700 to 1232 1 to 534       534/618
(86 %)
6 diff
(99.1 %id)
BQ362548.
matches multiple genes
stomach .g 964 to 1251 8 to 295   tiling clone, also hits gene shurerbo 288/295
(97 %)
6 diff
(98.0 %id)
BF991261 placenta_normal .g 1058 to 1219 176 to 15       162/176
(92 %)
0 diff
(100 %id)
X93831   .g 1339 to 1471 135 to 6       130/142
(91 %)
0 diff
(100 %id)
AW803147 uterus .g 1419 to 1826 1 to 408       408/408
(100 %)
8 diff
(98.1 %id)
AW843651 colon_normal .h 1 to 247 247 to 1   tiling clone,   247/247
(100 %)
1 diff
(99.6 %id)
CN390102 embryonic stem cells, cell lines H1, H7, andH9 .h 196 to 885 1 to 690 exact tiling clone,   690/690
(100 %)
0 diff
(100 %id)
BI462234 testis .i -9 to 788 1 to 802 F106L K123E L124A Q125A V126G ... tiling clone,   802/948
(84 %)
21 diff
(97.8 %id)
BF669665 brain, primitive neuroectoderm .j 1 to 686 1 to 694   tiling clone,   694/817
(84 %)
47 diff
(94.3 %id)
BP871609 embryonal kidney .j 2 to 598 1 to 596   tiling clone,   596/596
(100 %)
4 diff
(99.4 %id)
TI_159696728   .j 13 to 811 734 to 60   tiling clone, AAA   606/994
(60 %)
84 diff
(91.6 %id)
BM998182 lung, Metastatic Chondrosarcoma .k 1 to 581 599 to 19 P12H L14V W17C F18S S19P ... tiling clone, AAA   581/581
(100 %)
5 diff
(99.2 %id)
BQ771796 Chondrosarcoma Grade II, Left Pelvis .k 82 to 581 518 to 19   tiling clone, AAA   500/500
(100 %)
2 diff
(99.6 %id)
DB223647 trachea .l 1 to 567 2 to 568 exact tiling clone, capped   567/567
(100 %)
2 diff
(99.7 %id)
AK313863 testis Gene MTX1P1, variant not shown         Suspected internal deletion, this clone was ignored    
BX363177   Gene MTX1P1, variant not shown       fully sequenced, This clone was ignored    
BX374163   Gene MTX1P1, variant not shown       fully sequenced, This clone was ignored    
DB500833 hypothalamus Gene MTX1P1, variant not shown         Suspected internal deletion, this clone was ignored    
W46432 senescent fibroblast Gene MTX1P1, variant not shown       fully sequenced, AAA Suspected internal deletion, suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored    
W46487 senescent fibroblast Gene MTX1P1, variant not shown       fully sequenced, Suspected internal deletion, suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored    
AI962600 pooled germ cell tumors Gene MTX1P1, variant not shown         Suspected internal deletion, this clone was ignored    
BP270984 small intestine Gene MTX1P1, variant not shown         Suspected internal deletion, this clone was ignored    
DB034328 testis Gene MTX1P1, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI