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Gene MTRTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
424 supporting clones for gene MTR back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP249465 Kidney .a 1 to 592 1 to 592       592/592
(100 %)
2 diff
(99.7 %id)
NM_000254.2   .a 1 to 10558 1 to 10558 exact RefSeq,   10558/10558
(100 %)
0 diff
(100 %id)
DC377743 brain .a 1 to 572 1 to 572   tiling clone,   572/572
(100 %)
0 diff
(100 %id)
AK307390 tongue, tumor tissue .a 12 to 2677 1 to 2666       2666/2666
(100 %)
2 diff
(100.0 %id)
DC346170 tongue, tumor tissue .a 12 to 589 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BP248483 Kidney .a 12 to 592 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
DC366496   .a 12 to 575 1 to 565       565/570
(99 %)
2 diff
(99.7 %id)
BP348983 brain .a 12 to 593 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
AH003751   .a 30 to 7244 1 to 7210 exact AAA   7210/7210
(100 %)
9 diff
(99.9 %id)
AH003763   .a 30 to 7244 1 to 7210 exact AAA   7210/7210
(100 %)
9 diff
(99.9 %id)
AH003764   .a 30 to 7244 1 to 7210 exact AAA   7210/7210
(100 %)
9 diff
(99.9 %id)
AH003874   .a 30 to 7244 1 to 7210 exact AAA   7210/7210
(100 %)
9 diff
(99.9 %id)
AH003896   .a 30 to 7244 1 to 7210 exact AAA   7210/7210
(100 %)
9 diff
(99.9 %id)
AH004418   .a 30 to 7244 1 to 7210 exact AAA   7210/7210
(100 %)
9 diff
(99.9 %id)
AH004537   .a 30 to 7244 1 to 7210 exact AAA   7210/7210
(100 %)
9 diff
(99.9 %id)
AH004836   .a 30 to 7244 1 to 7210 exact AAA   7210/7210
(100 %)
9 diff
(99.9 %id)
DC347000 tongue, tumor tissue .a 30 to 548 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
BP332632 renal proximal tubule .a 30 to 612 1 to 583       583/583
(100 %)
0 diff
(100 %id)
U73338 Liver .a 30 to 7244 1 to 7210 exact tiling clone, AAA   7210/7210
(100 %)
9 diff
(99.9 %id)
AU100277   .a 30 to 328 1 to 300       300/300
(100 %)
4 diff
(98.7 %id)
BP380920   .a 31 to 572 1 to 540       540/550
(98 %)
9 diff
(98.4 %id)
AU077264   .a 37 to 473 1 to 436       436/436
(100 %)
5 diff
(98.9 %id)
BP380788   .a 38 to 594 1 to 554       554/554
(100 %)
12 diff
(97.9 %id)
DC325139 brain .a 39 to 617 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC355765   .a 39 to 579 1 to 542       542/542
(100 %)
1 diff
(99.9 %id)
DC320102 brain .a 67 to 651 1 to 585       585/585
(100 %)
3 diff
(99.5 %id)
U75743   .a 138 to 7240 1 to 7098 C255Y tiling clone, AAA   7098/7098
(100 %)
9 diff
(99.9 %id)
BX332266 Neuroblastoma Cot 25-normalized .a 224 to 1187 1 to 961       961/961
(100 %)
16 diff
(98.4 %id)
U71285   .a 361 to 4279 1 to 3917 exact     3917/3917
(100 %)
6 diff
(99.9 %id)
TI_2194645268   .a 399 to 1423 82 to 1105       1024/1237
(82 %)
14 diff
(98.9 %id)
TI_2194646202   .a 399 to 1315 86 to 1002       917/1005
(91 %)
21 diff
(98.0 %id)
TI_2194645294   .a 399 to 1453 83 to 1130       1048/1269
(82 %)
29 diff
(97.8 %id)
TI_2194646203   .a 399 to 1357 86 to 1048       961/1227
(78 %)
31 diff
(97.5 %id)
TI_2194644249   .a 399 to 1288 277 to 1155     Submitted on the opposite strand 879/1198
(73 %)
21 diff
(98.3 %id)
TI_2194644430   .a 399 to 1344 280 to 1217     Submitted on the opposite strand 910/1271
(71 %)
26 diff
(98.0 %id)
TI_2194644711   .a 399 to 1244 280 to 1119     Submitted on the opposite strand 840/1280
(65 %)
16 diff
(98.8 %id)
TI_2194645300   .a 399 to 1498 81 to 1160       1083/1278
(84 %)
25 diff
(98.1 %id)
TI_2194646204   .a 399 to 1375 84 to 1053       970/1170
(82 %)
16 diff
(98.7 %id)
TI_2194645465   .a 399 to 1443 82 to 1122       1041/1281
(81 %)
20 diff
(98.5 %id)
TI_1607546291   .a 399 to 1255 285 to 1147     Submitted on the opposite strand 861/1306
(65 %)
21 diff
(98.4 %id)
BC130616 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 402 to 4711 1 to 4309 D919G     4309/4309
(100 %)
4 diff
(100.0 %id)
BC136440 Testicle, PCR rescued clones .a 402 to 4711 1 to 4309 exact tiling clone,   4309/4309
(100 %)
1 diff
(100.0 %id)
BC144097 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 402 to 4711 1 to 4309 G238E     4309/4309
(100 %)
2 diff
(100.0 %id)
TI_1607546293   .a 609 to 1750 8 to 1140       1133/1269
(89 %)
24 diff
(98.2 %id)
BM450887 eye, retinoblastoma .a 645 to 1488 13 to 858       846/863
(98 %)
13 diff
(98.5 %id)
BP268350 thyroid .a 870 to 1243 1 to 376       376/579
(64 %)
6 diff
(99.0 %id)
TI_2194646551   .a 892 to 1655 1 to 771       765/771
(99 %)
12 diff
(98.5 %id)
TI_2194646623   .a 895 to 1406 1 to 512       512/517
(99 %)
17 diff
(96.8 %id)
TI_2194646574   .a 898 to 1696 8 to 805       798/808
(98 %)
10 diff
(98.8 %id)
TI_1607547731   .a 901 to 1092 11 to 206       196/206
(95 %)
18 diff
(91.3 %id)
BX390174 Neuroblastoma Cot 25-normalized .a 1024 to 1876 14 to 862       849/871
(97 %)
14 diff
(98.4 %id)
BP336015 coronary artery .a 1038 to 1619 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP336553 coronary artery .a 1038 to 1619 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP336596 coronary artery .a 1038 to 1612 1 to 575       575/581
(98 %)
14 diff
(97.6 %id)
BP337383 coronary artery .a 1038 to 1621 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BQ364647 stomach_normal .a 1184 to 1687 2 to 503       502/506
(99 %)
11 diff
(97.9 %id)
TI_1607546123   .a 1258 to 2373 7 to 1117       1113/1193
(93 %)
27 diff
(97.8 %id)
TI_2194646573   .a 1268 to 1933 21 to 688       668/688
(97 %)
9 diff
(98.7 %id)
TI_2194646571   .a 1275 to 1892 25 to 644       620/645
(96 %)
11 diff
(98.3 %id)
CN414972 embryonic stem cells, cell lines H1, H7, andH9 .a 1366 to 2039 25 to 698       674/698
(96 %)
7 diff
(99.0 %id)
CU444115 epidermis .a 1576 to 1937 1 to 363       363/368
(98 %)
11 diff
(97.1 %id)
CU449280 epidermis .a 1576 to 1937 1 to 362       362/367
(98 %)
11 diff
(97.1 %id)
CU451709 epidermis .a 1576 to 2337 1 to 763       763/763
(100 %)
6 diff
(99.3 %id)
BX485695   .a 1579 to 2199 1 to 623       623/626
(99 %)
6 diff
(99.1 %id)
CU457228 epidermis .a 1587 to 1937 14 to 364       351/369
(95 %)
13 diff
(96.5 %id)
TI_2194646569   .a 1607 to 2315 12 to 720       709/720
(98 %)
6 diff
(99.2 %id)
TI_1607546121   .a 1607 to 2467 12 to 872       861/929
(92 %)
26 diff
(97.3 %id)
TI_1607547745   .a 1609 to 1841 11 to 242       232/242
(95 %)
11 diff
(95.5 %id)
TI_2194646560   .a 1610 to 2465 17 to 873       857/929
(92 %)
18 diff
(98.1 %id)
CV356711 kidney_tumor .a 1675 to 2281 14 to 618       605/618
(97 %)
18 diff
(97.1 %id)
DW467179 Liver .a 1781 to 2111 17 to 347       331/347
(95 %)
7 diff
(98.0 %id)
BQ311389 breast_normal .a 1849 to 2360 517 to 7       511/517
(98 %)
7 diff
(98.7 %id)
EC497392 Prostate .a 2001 to 2113 1 to 111       111/111
(100 %)
7 diff
(93.7 %id)
EC569681 Prostate .a 2003 to 2113 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
TI_1607547733   .a 2034 to 2229 1 to 197       197/199
(98 %)
32 diff
(84.0 %id)
TI_1607547743   .a 2037 to 2309 1 to 275       275/288
(95 %)
12 diff
(95.9 %id)
TI_2194646598   .a 2038 to 2627 1 to 591       591/599
(98 %)
11 diff
(98.2 %id)
TI_2194644258   .a 2040 to 3185 1 to 1133       1137/1267
(89 %)
23 diff
(98.2 %id)
TI_2194646557   .a 2054 to 2797 25 to 768       744/768
(96 %)
8 diff
(99.0 %id)
BE929041 placenta_normal .a 2131 to 2371 248 to 11       238/248
(95 %)
3 diff
(98.8 %id)
AL598311   .a 2206 to 2925 1 to 721       721/721
(100 %)
1 diff
(99.9 %id)
EC451338 Prostate .a 2227 to 2313 1 to 87       87/87
(100 %)
0 diff
(100 %id)
EC567526 Prostate .a 2227 to 2313 1 to 87       87/87
(100 %)
0 diff
(100 %id)
EC494913 Prostate .a 2261 to 2342 1 to 81       81/81
(100 %)
1 diff
(98.8 %id)
TI_2194644255   .a 2350 to 2828 1 to 479       479/479
(100 %)
9 diff
(98.2 %id)
TI_2194646561   .a 2356 to 3029 9 to 685       677/685
(98 %)
9 diff
(98.7 %id)
TI_2194646610   .a 2357 to 2867 9 to 519       511/519
(98 %)
0 diff
(100 %id)
BG258321 embryonal carcinoma, cell line, testis .a 2509 to 3181 1 to 673       673/997
(67 %)
20 diff
(98.0 %id)
BU189680 eye, retinoblastoma .a 2515 to 3414 1 to 912       912/943
(96 %)
29 diff
(97.0 %id)
TI_2194644428   .a 2519 to 3711 10 to 1193       1184/1276
(92 %)
10 diff
(99.3 %id)
CV344680 head_normal .a 2548 to 3099 574 to 23     Submitted on the opposite strand 551/574
(95 %)
2 diff
(99.7 %id)
BP313585 mammary gland .a 2622 to 3203 1 to 581       581/583
(99 %)
5 diff
(99.2 %id)
BQ062840 lymph, lymphoma, cell line .a 2759 to 3747 36 to 1038       1003/1043
(96 %)
16 diff
(98.5 %id)
TI_1607546127   .a 2847 to 3905 1 to 1062       1062/1062
(100 %)
12 diff
(98.9 %id)
TI_1607547739   .a 2847 to 3099 1 to 255       255/259
(98 %)
10 diff
(96.2 %id)
AL041796 testis .a 2847 to 3336 1 to 490       490/490
(100 %)
0 diff
(100 %id)
TI_2194646606   .a 2848 to 3432 1 to 585       585/599
(97 %)
15 diff
(97.5 %id)
TI_2194644246   .a 2849 to 4022 1 to 1162       1162/1177
(98 %)
16 diff
(98.7 %id)
TI_2194646568   .a 2860 to 3569 17 to 727       711/727
(97 %)
6 diff
(99.2 %id)
TI_2194646570   .a 2861 to 3366 17 to 522       506/522
(96 %)
6 diff
(98.9 %id)
CV334327 nervous_tumor .a 2868 to 3271 1 to 404       404/404
(100 %)
0 diff
(100 %id)
BP220649 colon .a 2919 to 3478 1 to 560       560/560
(100 %)
2 diff
(99.7 %id)
BF852392 lung_normal .a 2939 to 3096 162 to 6     Submitted on the opposite strand 157/162
(96 %)
2 diff
(98.8 %id)
DA321616 hippocampus .a 2976 to 3542 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA773224 brain .a 3035 to 3569 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
BX470290 Liver .a 3238 to 3764 1 to 527       527/527
(100 %)
2 diff
(99.7 %id)
EC482681 Prostate .a 3300 to 3403 104 to 1       104/104
(100 %)
0 diff
(100 %id)
TI_2194646595   .a 3325 to 3825 4 to 506       503/522
(96 %)
22 diff
(95.8 %id)
TI_2194646552   .a 3330 to 3842 11 to 524       514/525
(97 %)
8 diff
(98.5 %id)
TI_2194646567   .a 3332 to 3920 14 to 601       588/602
(97 %)
9 diff
(98.6 %id)
TI_1607546119   .a 3332 to 4446 14 to 1122       1109/1198
(92 %)
40 diff
(96.7 %id)
TI_1607546295   .a 3333 to 4495 3 to 1165       1163/1165
(99 %)
29 diff
(97.6 %id)
TI_2194644253   .a 3340 to 3668 15 to 342   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 328/397
(82 %)
19 diff
(95.3 %id)
BU429497 lymph .a 3525 to 4013 8 to 496       489/496
(98 %)
3 diff
(99.4 %id)
TI_154150600   .a 3525 to 4304 79 to 851       774/777
(99 %)
42 diff
(94.6 %id)
TI_2194644256   .a 3564 to 4705 1 to 1130       1130/1268
(89 %)
24 diff
(98.2 %id)
TI_1607546111   .a 3568 to 4705 8 to 1143       1136/1277
(88 %)
17 diff
(98.7 %id)
AA356439   .a 3569 to 3860 1 to 292       292/292
(100 %)
0 diff
(100 %id)
TI_2194646554   .a 3570 to 4121 10 to 562       553/562
(98 %)
6 diff
(99.0 %id)
TI_2194646565   .a 3578 to 4245 21 to 688       668/688
(97 %)
8 diff
(98.9 %id)
TI_1607547741   .a 3588 to 3911 32 to 356       325/365
(89 %)
16 diff
(95.7 %id)
TI_2194646210   .a 3595 to 4711 1228 to 116       1113/1229
(90 %)
10 diff
(99.2 %id)
TI_2194646208   .a 3628 to 4711 1203 to 116       1088/1290
(84 %)
27 diff
(98.0 %id)
TI_2194645847   .a 3655 to 4711 1170 to 115       1056/1293
(81 %)
11 diff
(99.2 %id)
TI_2194645673   .a 3656 to 4711 1155 to 114       1042/1251
(83 %)
16 diff
(98.8 %id)
BE879762 large cell carcinoma, undifferentiated, lung .a 3660 to 4226 1 to 564       564/874
(64 %)
6 diff
(99.4 %id)
TI_2194646209   .a 3667 to 4711 1160 to 117       1044/1287
(81 %)
15 diff
(98.9 %id)
AI872333 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 3667 to 4317 668 to 19   AAA   650/650
(100 %)
22 diff
(96.7 %id)
DB161568 thymus .a 3670 to 4232 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
TI_2194645679   .a 3694 to 4711 1116 to 113       1004/1272
(78 %)
12 diff
(99.1 %id)
TI_154165415   .a 3704 to 4136 80 to 512       433/1087
(39 %)
9 diff
(99.2 %id)
CV363529 colon_normal .a 3721 to 4051 147 to 477       331/477
(69 %)
10 diff
(98.0 %id)
BQ960377 epidermoid carcinoma, cell line, lung .a 3721 to 4647 1 to 933       933/937
(99 %)
23 diff
(97.6 %id)
AA285223   .a 3745 to 3892 1 to 154       154/156
(98 %)
11 diff
(93.0 %id)
CF135946 lymph .a 3754 to 3906 1 to 153       153/153
(100 %)
3 diff
(98.1 %id)
TI_2194644432   .a 3761 to 4711 1 to 949       949/1283
(73 %)
10 diff
(99.3 %id)
TI_1607546297   .a 3777 to 4711 17 to 950       934/1308
(71 %)
10 diff
(99.3 %id)
BX498595 Liver .a 3790 to 4367 10 to 587       578/587
(98 %)
13 diff
(97.8 %id)
TI_1607547211   .a 3791 to 4711 1040 to 119       922/1046
(88 %)
10 diff
(99.1 %id)
TI_2194645647   .a 3829 to 4711 1005 to 115   tiling clone,   891/1307
(68 %)
16 diff
(98.8 %id)
TI_2194646602   .a 4047 to 4531 1 to 483       483/483
(100 %)
18 diff
(96.3 %id)
TI_1607547737   .a 4049 to 4328 1 to 277       277/280
(98 %)
28 diff
(90.0 %id)
TI_2194646553   .a 4057 to 4710 14 to 664       651/683
(95 %)
10 diff
(98.6 %id)
TI_1607546125   .a 4072 to 4711 31 to 669       639/1049
(60 %)
9 diff
(99.2 %id)
DB153444 thymus .a 4091 to 4688 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
TI_2194646566   .a 4095 to 4547 29 to 481       453/481
(94 %)
11 diff
(97.8 %id)
TI_2194644436   .a 4109 to 4711 76 to 676       601/1252
(48 %)
10 diff
(99.3 %id)
BF515662   .a 4204 to 4571 388 to 20       369/396
(93 %)
0 diff
(100 %id)
BX510153   .a 4215 to 4805 1 to 591       591/591
(100 %)
4 diff
(99.4 %id)
DA623368 Kidney .a 4229 to 4776 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA442815 tongue, tumor tissue .a 4272 to 4838 2 to 569   capped   568/568
(100 %)
4 diff
(99.3 %id)
DA282992 corpus callosum .a 4301 to 4857 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
CB268493 adipose .a 4302 to 4679 1 to 378       378/378
(100 %)
3 diff
(99.3 %id)
TI_2194632507   .a 4373 to 4719 522 to 176       347/522
(66 %)
5 diff
(99.1 %id)
TI_2194646572   .a 4373 to 4711 9 to 348       340/727
(46 %)
5 diff
(99.4 %id)
AA356527   .a 4402 to 4791 1 to 387       387/387
(100 %)
4 diff
(99.0 %id)
DA577029   .a 4423 to 4995 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
AA306642   .a 4514 to 4956 8 to 448       441/448
(98 %)
2 diff
(99.6 %id)
AW958815   .a 4550 to 5086 1 to 537       537/540
(99 %)
23 diff
(95.8 %id)
DA883020   .a 4620 to 5173 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
AW841013 colon_normal .a 4626 to 4887 1 to 262       262/434
(60 %)
5 diff
(98.9 %id)
BM874228   .a 4993 to 5418 1 to 426     Submitted on the opposite strand 426/426
(100 %)
1 diff
(99.8 %id)
N42492 melanocyte .a 5076 to 5447 16 to 389       374/390
(95 %)
6 diff
(98.5 %id)
CD516382 White Matter .a 5123 to 5892 10 to 781       772/913
(84 %)
6 diff
(99.4 %id)
CD512766 brain, Pituitary .a 5132 to 5952 1 to 826       826/865
(95 %)
10 diff
(98.9 %id)
BX499278 Liver .a 5139 to 5748 1 to 611       611/611
(100 %)
11 diff
(98.2 %id)
BE939247 testis_normal .a 5165 to 5579 14 to 429       416/429
(96 %)
6 diff
(98.7 %id)
N28615 melanocyte .a 5215 to 5538 1 to 324       324/327
(99 %)
5 diff
(98.5 %id)
BX499260 Liver .a 5248 to 5655 1 to 408       408/408
(100 %)
3 diff
(99.3 %id)
BF381641 brain, primitive neuroectoderm .a 5255 to 6016 1 to 748       748/890
(84 %)
39 diff
(95.7 %id)
CB858029 anterior tongue, pooled .a 5289 to 5846 558 to 1     Submitted on the opposite strand 558/558
(100 %)
4 diff
(99.3 %id)
DA604820   .a 5297 to 5812 2 to 517   capped   516/516
(100 %)
2 diff
(99.7 %id)
BP339609 Spleen .a 5302 to 5852 1 to 551       551/551
(100 %)
2 diff
(99.7 %id)
CB119321 Liver .a 5326 to 5946 1 to 621       621/621
(100 %)
4 diff
(99.4 %id)
CB857945 anterior tongue, pooled .a 5346 to 5846 501 to 1     Submitted on the opposite strand 501/501
(100 %)
2 diff
(99.7 %id)
AV708585 adrenal gland .a 5358 to 5963 1 to 606       606/606
(100 %)
4 diff
(99.4 %id)
BM873835   .a 5405 to 5829 425 to 1     Submitted on the opposite strand 425/425
(100 %)
2 diff
(99.6 %id)
BM795229 stomach .a 5417 to 6024 1 to 609       609/609
(100 %)
4 diff
(99.4 %id)
BM854336 stomach .a 5417 to 5671 1 to 255       255/257
(99 %)
2 diff
(99.3 %id)
BE047753 brain, tumor, 5 pooled (see description) .a 5444 to 5964 10 to 530       521/530
(98 %)
6 diff
(98.9 %id)
T99659 liver and spleen .a 5445 to 5783 1 to 351       351/353
(99 %)
25 diff
(93.0 %id)
T99689 liver and spleen .a 5445 to 5730 1 to 294       294/321
(91 %)
12 diff
(96.3 %id)
BI793260 Islets of Langerhans, Pancreas .a 5515 to 6055 1 to 541       541/541
(100 %)
0 diff
(100 %id)
BI962573 Islets of Langerhans, Pancreas .a 5515 to 5925 1 to 411       411/411
(100 %)
0 diff
(100 %id)
FN105987 breast carcinoma .a 5554 to 5639 85 to 1     Submitted on the opposite strand 85/86
(98 %)
3 diff
(96.6 %id)
AV746648 Pituitary .a 5562 to 5918 1 to 357       357/388
(92 %)
4 diff
(99.0 %id)
CN414975 embryonic stem cells, DMSO-treated H9 cellline .a 5563 to 6072 1 to 510       510/510
(100 %)
3 diff
(99.5 %id)
N58983 multiple sclerosis lesions .a 5580 to 5775 1 to 198       198/198
(100 %)
7 diff
(96.5 %id)
BX476116   .a 5584 to 6320 1 to 737       737/737
(100 %)
3 diff
(99.6 %id)
BM472454 melanotic melanoma, skin .a 5592 to 6470 1 to 895       895/940
(95 %)
21 diff
(97.8 %id)
AV728119 hypothalamus .a 5651 to 6227 1 to 577       577/599
(96 %)
6 diff
(99.0 %id)
AV725573 hypothalamus .a 5651 to 6352 1 to 698   AAA   698/698
(100 %)
5 diff
(99.3 %id)
BG504914 embryonal carcinoma, testis .a 5661 to 6327 1 to 666       666/667
(99 %)
6 diff
(99.2 %id)
AA085465   .a 5678 to 6123 1 to 446       446/453
(98 %)
2 diff
(99.6 %id)
N98912 lung .a 5691 to 5992 1 to 321   fully sequenced,   321/321
(100 %)
12 diff
(96.3 %id)
BG613788 embryonal carcinoma, testis .a 5718 to 6527 1 to 806       806/806
(100 %)
18 diff
(97.8 %id)
BG674827 skin .a 5763 to 6595 1 to 836       836/836
(100 %)
13 diff
(98.5 %id)
BE879216 large cell carcinoma, undifferentiated, lung .a 5771 to 6360 1 to 591       591/592
(99 %)
2 diff
(99.7 %id)
BQ438403 testis .a 5792 to 6556 1 to 770       770/774
(99 %)
10 diff
(98.8 %id)
T94897 lung .a 5793 to 6209 1 to 436       436/440
(99 %)
24 diff
(94.6 %id)
AK124325 uterus, tumor tissue .a 5795 to 6939 622 to 1766   available from FLJ,   1145/1766
(64 %)
6 diff
(99.7 %id)
H51857 liver and spleen .a 5834 to 6147 1 to 320   fully sequenced,   320/320
(100 %)
2 diff
(99.4 %id)
AI425009 pooled .a 5840 to 6352 513 to 1       513/513
(100 %)
0 diff
(100 %id)
W69939 heart .a 5887 to 6308 1 to 423       423/429
(98 %)
2 diff
(99.6 %id)
W03464 melanocyte .a 5890 to 6320 1 to 435       435/440
(98 %)
6 diff
(98.7 %id)
BE463498 Kidney .a 5894 to 6353 460 to 1       460/460
(100 %)
0 diff
(100 %id)
N28637 melanocyte .a 5898 to 6353 1 to 457       457/458
(99 %)
5 diff
(99.0 %id)
BE168517 head_neck .a 5906 to 6306 401 to 3     Submitted on the opposite strand 399/401
(99 %)
0 diff
(100 %id)
BG504950 embryonal carcinoma, testis .a 5915 to 6383 1 to 470   AAA   470/470
(100 %)
5 diff
(99.0 %id)
AV733197 pheochromocytoma .a 5916 to 6353 1 to 437       437/440
(99 %)
9 diff
(98.0 %id)
CB998770 Blood vessels - aorta, basilar and artery .a 5919 to 6577 1 to 669       669/793
(84 %)
18 diff
(97.8 %id)
BF336946 colon .a 5927 to 6332 410 to 1       410/410
(100 %)
0 diff
(100 %id)
N69921 lung .a 5962 to 6353 397 to 1   fully sequenced,   397/397
(100 %)
4 diff
(99.0 %id)
AA857538 adenocarcinoma, colon .a 6021 to 6353 333 to 1       333/333
(100 %)
0 diff
(100 %id)
BE866478 bladder, carcinoma, cell line .a 6065 to 6706 1 to 662       662/835
(79 %)
66 diff
(92.1 %id)
H51281 liver and spleen .a 6117 to 6354 257 to 3   fully sequenced,   255/257
(99 %)
3 diff
(98.9 %id)
BX099733 melanocyte .a 6118 to 6822 1 to 705       705/705
(100 %)
2 diff
(99.8 %id)
N45931 melanocyte .a 6118 to 6264 1 to 147       147/147
(100 %)
2 diff
(98.7 %id)
AA975197 Kidney .a 6124 to 6353 230 to 1       230/230
(100 %)
0 diff
(100 %id)
DB224603 trachea .a 6140 to 6698 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BF383048 brain, primitive neuroectoderm .a 6164 to 6869 1 to 709       709/866
(81 %)
38 diff
(95.7 %id)
CF887086 lung .a 6208 to 6692 1 to 485   fully sequenced,   485/485
(100 %)
1 diff
(99.8 %id)
AA233640 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 6209 to 6634 1 to 426       426/426
(100 %)
1 diff
(99.8 %id)
R86087 breast .a 6262 to 6651 1 to 394       394/394
(100 %)
6 diff
(98.5 %id)
CK002837 brain/CNS, Human Brain - Cerebellar Cortex .a 6314 to 6864 1 to 551   AAA   551/551
(100 %)
2 diff
(99.7 %id)
BM129112 Islets of Langerhans, Pancreas .a 6331 to 6857 1 to 527       527/527
(100 %)
2 diff
(99.7 %id)
BM126477 Islets of Langerhans, Pancreas .a 6347 to 6893 1 to 547       547/547
(100 %)
3 diff
(99.5 %id)
TI_154040835   .a 6355 to 7239 956 to 86   AAA   871/978
(89 %)
18 diff
(98.2 %id)
TI_157601834   .a 6362 to 6986 700 to 76   AAA   625/929
(67 %)
3 diff
(99.7 %id)
CF529351 placenta .a 6362 to 6986 643 to 19   AAA   625/626
(99 %)
3 diff
(99.6 %id)
DB350683.
matches multiple genes
uterus, tumor tissue .a 6368 to 6939 573 to 1     also hits gene masayu 573/573
(100 %)
2 diff
(99.7 %id)
TI_149305577   .a 6381 to 7239 936 to 85   AAA   852/963
(88 %)
23 diff
(97.7 %id)
AI435329 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 6389 to 6859 471 to 1       471/471
(100 %)
2 diff
(99.6 %id)
TI_149308605   .a 6401 to 7239 922 to 92   AAA   831/947
(87 %)
18 diff
(98.1 %id)
CN414974 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 6411 to 7090 1 to 682       682/685
(99 %)
4 diff
(99.5 %id)
H42689 breast .a 6423 to 6804 1 to 396       396/408
(97 %)
25 diff
(93.9 %id)
AA972733 pooled .a 6437 to 6986 550 to 1       550/550
(100 %)
2 diff
(99.7 %id)
BU928191 mixed (pool of 40 RNAs) .a 6446 to 7159 1 to 720       720/803
(89 %)
66 diff
(91.8 %id)
TI_149291294   .a 6449 to 7244 870 to 79   AAA   792/908
(87 %)
8 diff
(99.2 %id)
BM973932 lung .a 6449 to 7244 810 to 19   AAA   792/837
(94 %)
8 diff
(99.1 %id)
BE219248 carcinoid, lung .a 6453 to 6985 533 to 1       533/533
(100 %)
2 diff
(99.7 %id)
BU616938 Cell Line, Chondrosarcoma .a 6455 to 7239 797 to 17   AAA   781/781
(100 %)
9 diff
(98.9 %id)
AI432458 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 6462 to 6986 525 to 1       525/525
(100 %)
1 diff
(99.9 %id)
AW770636 carcinoid, lung .a 6495 to 6983 489 to 1       489/489
(100 %)
2 diff
(99.6 %id)
N22830 melanocyte .a 6500 to 6986 495 to 1       495/495
(100 %)
12 diff
(97.6 %id)
AI127504 uterus .a 6503 to 6986 484 to 1       484/484
(100 %)
2 diff
(99.6 %id)
AI379052 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 6503 to 6987 485 to 1       485/485
(100 %)
2 diff
(99.6 %id)
BU631874 cell lines, Chondrosarcoma .a 6531 to 7239 726 to 17   AAA   710/710
(100 %)
3 diff
(99.6 %id)
CB410920 cochlea, ear .a 6533 to 6857 1 to 327   AAA   327/327
(100 %)
4 diff
(98.8 %id)
BU685909 lung, Primary Lung Epithelial Cells .a 6580 to 7239 677 to 17   AAA   661/661
(100 %)
4 diff
(99.4 %id)
W69829 heart .a 6584 to 6986 407 to 1       407/407
(100 %)
6 diff
(98.6 %id)
CA428104 Bone, Subchondral Bone .a 6592 to 7244 672 to 19   AAA   654/654
(100 %)
5 diff
(99.3 %id)
AW270869 Kidney .a 6593 to 6859 268 to 1       268/268
(100 %)
5 diff
(98.2 %id)
BE221162 carcinoid, lung .a 6603 to 6989 387 to 1       387/387
(100 %)
3 diff
(99.3 %id)
BM979788 lung, Primary Lung Epithelial Cells .a 6606 to 7239 651 to 17   AAA   635/635
(100 %)
3 diff
(99.6 %id)
AW148937 Kidney, renal cell tumor .a 6622 to 6986 366 to 1       366/366
(100 %)
2 diff
(99.5 %id)
T94852 lung .a 6627 to 6973 354 to 1       354/452
(78 %)
8 diff
(98.3 %id)
BQ012424 placenta .a 6630 to 6986 375 to 19   AAA   357/357
(100 %)
1 diff
(99.8 %id)
T99087 liver and spleen .a 6646 to 6981 354 to 9       346/356
(97 %)
0 diff
(100 %id)
DR979846 placenta .a 6660 to 6867 1 to 207   AAA Submitted on the opposite strand 207/207
(100 %)
3 diff
(98.6 %id)
CF890798 lung .a 6662 to 7244 596 to 19   fully sequenced, AAA   578/578
(100 %)
2 diff
(99.7 %id)
AW003103 pooled germ cell tumors .a 6668 to 7241 580 to 5       576/580
(99 %)
0 diff
(100 %id)
AI742646 pooled .a 6669 to 7241 580 to 6       575/580
(99 %)
0 diff
(100 %id)
AI767749 Kidney .a 6669 to 7245 578 to 1       578/578
(100 %)
2 diff
(99.7 %id)
AW071519 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .a 6669 to 6859 191 to 1       191/191
(100 %)
1 diff
(99.5 %id)
AI247949 liver and spleen .a 6677 to 6989 313 to 1       313/313
(100 %)
1 diff
(99.7 %id)
AW978942   .a 6715 to 7238 525 to 1     Submitted on the opposite strand 525/527
(99 %)
14 diff
(97.4 %id)
N31822 melanocyte .a 6720 to 7244 527 to 1       527/529
(99 %)
9 diff
(98.3 %id)
N67864 melanocyte .a 6723 to 6986 265 to 1       265/268
(98 %)
2 diff
(99.3 %id)
BI792969 Islets of Langerhans, Pancreas .a 6725 to 7248 523 to 2       522/523
(99 %)
0 diff
(100 %id)
AA098941   .a 6727 to 7240 518 to 1       518/527
(98 %)
7 diff
(98.7 %id)
AI193620 lung .a 6727 to 7240 515 to 1       515/515
(100 %)
5 diff
(99.1 %id)
AI337887 uterus .a 6731 to 7241 518 to 7       512/518
(98 %)
0 diff
(100 %id)
AI632935 carcinoid, lung .a 6732 to 7241 509 to 2       508/509
(99 %)
0 diff
(100 %id)
AW301278 Kidney .a 6739 to 7241 501 to 1       501/501
(100 %)
1 diff
(99.9 %id)
AW511115 pooled .a 6752 to 7241 493 to 3       491/493
(99 %)
0 diff
(100 %id)
N36771 melanocyte .a 6756 to 7244 491 to 1       491/491
(100 %)
5 diff
(99.0 %id)
AI692587 carcinoid, lung .a 6758 to 7241 485 to 1       485/485
(100 %)
3 diff
(99.4 %id)
AI342394 uterus .a 6759 to 7248 495 to 5       491/495
(99 %)
0 diff
(100 %id)
BQ021587 lung, Metastatic Chondrosarcoma .a 6776 to 7246 486 to 18   AAA   469/469
(100 %)
2 diff
(99.6 %id)
AI360399 anaplastic oligodendroglioma, brain .a 6795 to 7244 451 to 1       451/451
(100 %)
2 diff
(99.6 %id)
AW299977 Kidney .a 6795 to 7244 460 to 13   AAA   448/448
(100 %)
1 diff
(99.8 %id)
AA827619 germinal center B cell .a 6797 to 7239 465 to 22   AAA   444/444
(100 %)
1 diff
(99.8 %id)
AW008303 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 6829 to 7244 417 to 1       417/417
(100 %)
1 diff
(99.8 %id)
AA233650 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 6832 to 7244 414 to 1       414/414
(100 %)
1 diff
(99.8 %id)
AI866534 brain, tumor, 5 pooled (see description) .a 6836 to 7208 371 to 1       371/371
(100 %)
1 diff
(99.8 %id)
AI962366 pooled germ cell tumors .a 6838 to 7244 422 to 14   AAA   409/409
(100 %)
4 diff
(99.1 %id)
AI130762 heart .a 6842 to 7241 402 to 2       401/402
(99 %)
0 diff
(100 %id)
AI829040 2 pooled tumors (clear cell type), Kidney .a 6843 to 7248 408 to 5       404/408
(99 %)
0 diff
(100 %id)
AA676323 liver and spleen .a 6850 to 7239 391 to 1       391/391
(100 %)
1 diff
(99.8 %id)
AW016520   .a 6856 to 7244 404 to 18   AAA   387/387
(100 %)
1 diff
(99.8 %id)
AI302509 2 pooled tumors (clear cell type), Kidney .a 6857 to 7239 402 to 19   AAA   384/384
(100 %)
2 diff
(99.5 %id)
AW589940 pooled germ cell tumors .a 6860 to 7248 393 to 4       390/393
(99 %)
0 diff
(100 %id)
BQ005406 Chondrosarcoma, Left Pelvis .a 6866 to 7244 398 to 19   AAA   380/380
(100 %)
8 diff
(97.9 %id)
AI141234 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 6870 to 7248 384 to 5   tiling clone,   380/384
(98 %)
0 diff
(100 %id)
AA889753 pooled .a 6872 to 7239 369 to 1       369/369
(100 %)
1 diff
(99.8 %id)
AA740367 2 pooled tumors (clear cell type), Kidney .a 6873 to 7241 373 to 5       369/373
(98 %)
0 diff
(100 %id)
AA782469 parathyroid gland, parathyroid tumor .a 6879 to 7244 378 to 12   AAA   367/367
(100 %)
1 diff
(99.8 %id)
AW299278 Kidney .a 6893 to 7239 346 to 1       346/346
(100 %)
8 diff
(97.7 %id)
W15320 parathyroid gland, parathyroid tumor .a 6897 to 7202 311 to 1       311/311
(100 %)
11 diff
(96.5 %id)
CB410793 cochlea, ear .a 6904 to 7240 1 to 338   AAA   338/338
(100 %)
2 diff
(99.5 %id)
AA972264 pooled .a 6916 to 7244 327 to 1       327/327
(100 %)
1 diff
(99.7 %id)
AI202545 Prostate .a 6948 to 7245 299 to 1       299/299
(100 %)
1 diff
(99.7 %id)
AA843354 parathyroid gland, parathyroid tumor .a 6953 to 7244 304 to 12   AAA   293/293
(100 %)
1 diff
(99.7 %id)
H42734 breast .a 6973 to 7223 253 to 1       253/253
(100 %)
3 diff
(98.9 %id)
AI214720   .a 6977 to 7241 267 to 2       266/267
(99 %)
0 diff
(100 %id)
AI188868 placenta .a 6978 to 7244 279 to 12   AAA   268/268
(100 %)
3 diff
(98.9 %id)
AW519246 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 6987 to 7244 259 to 1       259/263
(98 %)
1 diff
(99.7 %id)
DA108752 cerebellum .a 7016 to 7587 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
BQ722806 sympathetic trunk .a 7227 to 7995 1 to 769   tiling clone,   769/887
(86 %)
53 diff
(94.1 %id)
CN370866 embryonic stem cells, cell lines H1, H7, andH9 .a 7252 to 7868 1 to 617       617/617
(100 %)
1 diff
(99.9 %id)
DA946679 Spleen .a 7300 to 7878 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DN995082 brain, whole brain .a 7473 to 7986 9 to 522       514/522
(98 %)
6 diff
(98.9 %id)
AK125206 brain .a 7497 to 10509 1 to 3013   tiling clone, available from FLJ,   3013/3013
(100 %)
6 diff
(99.9 %id)
DA529314 brain .a 7498 to 8104 2 to 608   capped   607/607
(100 %)
2 diff
(99.7 %id)
AL709673 human skeletal muscle .a 7538 to 7975 1 to 438     Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 438/438
(100 %)
3 diff
(99.4 %id)
BC015894 Uterus, leiomyosarcoma .a 7545 to 10509 1 to 2965   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 2965/2965
(100 %)
5 diff
(99.9 %id)
BC067276 Peripheral Nervous System, dorsal rootganglion .a 7561 to 10509 1 to 2949   available from MGC, AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 2949/2949
(100 %)
4 diff
(99.9 %id)
BQ889689 dorsal root ganglia .a 7562 to 8512 1 to 953   available from MGC,   953/953
(100 %)
9 diff
(99.1 %id)
BE883618 leiomyosarcoma, uterus .a 7565 to 8230 1 to 671   available from MGC,   671/678
(98 %)
23 diff
(96.7 %id)
CN370867 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 7572 to 8190 1 to 619       619/619
(100 %)
6 diff
(99.1 %id)
CX867098 embryonic stem .a 7583 to 8437 1 to 856       856/856
(100 %)
2 diff
(99.8 %id)
DA509542 brain .a 7612 to 8162 2 to 551   tiling clone, capped   550/550
(100 %)
1 diff
(99.9 %id)
DA909276   .a 7672 to 8228 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA584667 lung .a 7720 to 8298 2 to 582   capped   581/581
(100 %)
6 diff
(99.0 %id)
AW846881 colon .a 7791 to 8144 368 to 15       354/377
(93 %)
0 diff
(100 %id)
AW846880 colon .a 7797 to 8143 353 to 4       350/359
(97 %)
0 diff
(100 %id)
DA762174 tongue .a 7844 to 8376 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
BF960887 nervous_normal .a 7912 to 8018 14 to 121       108/121
(89 %)
6 diff
(95.1 %id)
BF034321 adenocarcinoma, ovary .a 7914 to 8679 1 to 768       768/814
(94 %)
34 diff
(95.9 %id)
DA972865 synovial membrane tissue from rheumatioidarthritis .a 7965 to 8526 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BQ340485 nervous_normal .a 8089 to 8547 456 to 1       456/456
(100 %)
4 diff
(99.2 %id)
BI062872 uterus_tumor .a 8106 to 8566 1 to 461       461/461
(100 %)
2 diff
(99.6 %id)
AK090487 adrenal gland .a 8132 to 10557 1 to 2426   available from FLJ,   2426/2426
(100 %)
3 diff
(99.9 %id)
DA009188 adrenal gland .a 8133 to 8692 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
T79285 liver and spleen .a 8184 to 8538 1 to 359       359/368
(97 %)
11 diff
(97.1 %id)
BQ343744 nervous_tumor .a 8390 to 8590 303 to 103       201/303
(66 %)
0 diff
(100 %id)
BF959009 nervous_normal .a 8417 to 8547 1 to 131       131/131
(100 %)
6 diff
(95.5 %id)
CD515399 White Matter .a 8447 to 9410 1 to 985   AAA   985/990
(99 %)
27 diff
(97.3 %id)
AV661407 corresponding non cancerous liver tissue .a 8622 to 9047 1 to 426     Submitted on the opposite strand 426/426
(100 %)
1 diff
(99.8 %id)
CA393933 eye, RPE/choroid .a 8651 to 9164 1 to 514       514/514
(100 %)
1 diff
(99.9 %id)
CA426548 cell lines, Chondrosarcoma .a 8953 to 9724 769 to 1       769/769
(100 %)
6 diff
(99.3 %id)
BQ353184 head_neck .a 9002 to 9510 13 to 532       520/536
(97 %)
16 diff
(97.1 %id)
BF215782 brain, glioblastoma .a 9119 to 9769 1 to 645       645/858
(75 %)
47 diff
(94.6 %id)
BQ934835 sciatic nerve .a 9166 to 9965 1 to 816       816/965
(84 %)
49 diff
(95.0 %id)
BQ026067 placenta .a 9177 to 9705 546 to 18   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 529/529
(100 %)
0 diff
(100 %id)
BF211132 bone marrow, from chronic myelogenous leukemia .a 9187 to 9763 1 to 579       579/579
(100 %)
12 diff
(98.0 %id)
AI131054 heart .a 9222 to 9705 484 to 1       484/484
(100 %)
0 diff
(100 %id)
AL709674 human skeletal muscle .a 9229 to 9705 499 to 22   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 478/478
(100 %)
2 diff
(99.6 %id)
AA683529 heart .a 9240 to 9705 467 to 1       467/467
(100 %)
1 diff
(99.8 %id)
BM090662 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 9253 to 9847 1 to 595       595/595
(100 %)
1 diff
(99.9 %id)
DW426189 Liver .a 9253 to 9519 17 to 283       267/283
(94 %)
11 diff
(96.2 %id)
BE545860 cervical carcinoma cell line, cervix .a 9337 to 10132 1 to 801       801/882
(90 %)
42 diff
(95.3 %id)
T79198 liver and spleen .a 9360 to 9705 354 to 1       354/386
(91 %)
12 diff
(96.9 %id)
N41921 placenta .a 9378 to 9657 1 to 285       285/285
(100 %)
3 diff
(99.0 %id)
AI446091 adenocarcinoma, Pancreas .a 9455 to 9709 255 to 1       255/255
(100 %)
0 diff
(100 %id)
BG545702 lung .a 9484 to 10255 1 to 781       781/782
(99 %)
20 diff
(97.5 %id)
AW050558 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 9502 to 9705 204 to 1       204/232
(87 %)
6 diff
(97.5 %id)
AW994813 breast_normal .a 9607 to 10287 28 to 705       678/713
(95 %)
8 diff
(98.9 %id)
H02792 placenta .a 9637 to 9997 1 to 371       371/435
(85 %)
15 diff
(96.6 %id)
TI_154110086   .a 9707 to 10509 869 to 73   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 797/980
(81 %)
11 diff
(98.9 %id)
BM851252 stomach .a 9718 to 10175 1 to 457       457/457
(100 %)
1 diff
(99.8 %id)
BM851179 stomach .a 9718 to 10059 1 to 341       341/341
(100 %)
1 diff
(99.8 %id)
BM851086 stomach .a 9718 to 10169 1 to 453       453/453
(100 %)
1 diff
(99.8 %id)
BM852208 stomach .a 9718 to 10254 1 to 537       537/537
(100 %)
0 diff
(100 %id)
BM848915 stomach .a 9718 to 10300 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BM851210 stomach .a 9719 to 10245 1 to 527       527/527
(100 %)
5 diff
(99.1 %id)
TI_149290404   .a 9734 to 10509 833 to 71   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 763/796
(95 %)
21 diff
(97.4 %id)
AA424349 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 9741 to 10163 1 to 423       423/423
(100 %)
0 diff
(100 %id)
BM851307 stomach .a 9743 to 10022 1 to 280       280/280
(100 %)
4 diff
(98.6 %id)
BQ429034 testis .a 9766 to 10544 1 to 781       781/783
(99 %)
6 diff
(99.3 %id)
N31212 melanocyte .a 9771 to 10082 1 to 312   fully sequenced,   312/312
(100 %)
0 diff
(100 %id)
BM973403 lung .a 9781 to 10509 741 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 723/723
(100 %)
12 diff
(98.4 %id)
AV704240 adrenal gland .a 9794 to 10294 1 to 505       505/626
(80 %)
32 diff
(94.9 %id)
BQ003581 Chondrosarcoma, Left Pelvis .a 9828 to 10509 700 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 682/682
(100 %)
3 diff
(99.6 %id)
BM851251 stomach .a 9853 to 10104 1 to 253       253/253
(100 %)
1 diff
(99.7 %id)
H45537 breast .a 9873 to 10351 1 to 491       491/492
(99 %)
20 diff
(96.0 %id)
AA215787 germinal center B cell .a 9873 to 10187 1 to 319       319/319
(100 %)
6 diff
(98.2 %id)
BU621402 cell lines, Chondrosarcoma .a 9883 to 10509 645 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 627/627
(100 %)
0 diff
(100 %id)
BM090894 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 9922 to 10508 587 to 1       587/587
(100 %)
0 diff
(100 %id)
AV719225 corresponding non cancerous liver tissue .a 9925 to 10505 581 to 1     Submitted on the opposite strand 581/581
(100 %)
1 diff
(99.9 %id)
CD676835 eye, Trabecular meshwork .a 9938 to 10510 1 to 573       573/573
(100 %)
0 diff
(100 %id)
AI697569 carcinoid, lung .a 9949 to 10509 573 to 13   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 561/561
(100 %)
1 diff
(99.9 %id)
BE673742 carcinoid, lung .a 9962 to 10510 557 to 9       549/557
(98 %)
0 diff
(100 %id)
N32584 placenta .a 9970 to 10509 538 to 1       538/538
(100 %)
14 diff
(97.4 %id)
BE551145 carcinoid, lung .a 9975 to 10509 535 to 1       535/535
(100 %)
1 diff
(99.9 %id)
AV706396 adrenal gland .a 9980 to 10509 1 to 531       531/583
(91 %)
7 diff
(98.8 %id)
AI697833 carcinoid, lung .a 9995 to 10509 526 to 12   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 515/515
(100 %)
0 diff
(100 %id)
DB295211 adrenal gland .a 10018 to 10557 540 to 1       540/542
(99 %)
1 diff
(99.9 %id)
AI688219 colon .a 10018 to 10499 492 to 11       482/492
(97 %)
0 diff
(100 %id)
AI291299 carcinoid, lung .a 10030 to 10510 487 to 7       481/487
(98 %)
0 diff
(100 %id)
N75967 liver and spleen .a 10031 to 10499 469 to 1       469/469
(100 %)
1 diff
(99.8 %id)
AA235383 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 10039 to 10443 1 to 405       405/405
(100 %)
0 diff
(100 %id)
AW615198 Kidney .a 10042 to 10465 422 to 1       422/422
(100 %)
3 diff
(99.3 %id)
AI492326 Kidney .a 10051 to 10516 481 to 16   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 466/466
(100 %)
0 diff
(100 %id)
N21277 melanocyte .a 10052 to 10509 467 to 1   fully sequenced,   467/467
(100 %)
2 diff
(99.6 %id)
AA836065 germinal center B cell .a 10056 to 10510 463 to 9       455/463
(98 %)
0 diff
(100 %id)
AI916534 Kidney .a 10057 to 10504 455 to 7       449/455
(98 %)
0 diff
(100 %id)
AW206251   .a 10060 to 10509 467 to 18   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 450/452
(99 %)
1 diff
(99.8 %id)
AW976228   .a 10078 to 10508 431 to 1     Submitted on the opposite strand 431/431
(100 %)
27 diff
(93.8 %id)
CB241165 Human Lung Epithelial cells, lung .a 10101 to 10557 475 to 19   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 457/466
(98 %)
0 diff
(100 %id)
AI292114 carcinoid, lung .a 10103 to 10510 412 to 5       408/412
(99 %)
0 diff
(100 %id)
AI538241 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 10112 to 10469 380 to 23   AAA Possibly primed on the genome, locally A rich (17/19 A in genome downstream of last aligned base) 358/358
(100 %)
1 diff
(99.8 %id)
AI784105 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 10117 to 10469 353 to 1       353/353
(100 %)
0 diff
(100 %id)
AA555024 breast .a 10143 to 10558 415 to 1   tiling clone,   415/415
(100 %)
1 diff
(99.8 %id)
AI911801 colon .a 10148 to 10510 362 to 1       362/362
(100 %)
4 diff
(98.9 %id)
AA918245 Kidney .a 10158 to 10509 352 to 1       352/352
(100 %)
0 diff
(100 %id)
AA747919 germinal center B cell .a 10166 to 10510 345 to 1       345/345
(100 %)
0 diff
(100 %id)
AI251010 adenocarcinoma, Pancreas .a 10175 to 10509 334 to 1       334/334
(100 %)
1 diff
(99.8 %id)
AA424515 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 10217 to 10510 301 to 8       294/301
(97 %)
0 diff
(100 %id)
BC144095 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 1 to 4157 1 to 4156 exact tiling clone,   4156/4156
(100 %)
1 diff
(100.0 %id)
TI_2194646564   .b 1634 to 2172 1 to 539       539/559
(96 %)
12 diff
(97.9 %id)
TI_2194646556   .b 1950 to 2980 3 to 1036       1032/1054
(97 %)
27 diff
(97.5 %id)
AK299904 brain .c 1 to 6590 1 to 4036 W1109C L1110M G1111S P1112V I1113Y ... tiling clone, Suspected internal deletion 4036/4036
(100 %)
3 diff
(100.0 %id)
BC144098 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .d 1 to 4197 1 to 4195 exact tiling clone,   4195/4195
(100 %)
5 diff
(99.9 %id)
BX484356   .d 808 to 1271 1 to 466       466/466
(100 %)
4 diff
(99.2 %id)
BX484357   .d 6013 to 6725 730 to 17   tiling clone, AAA   714/714
(100 %)
5 diff
(99.3 %id)
DN996221 breast cancer, Mammary gland (cancer tissue) .e-u 1 to 613 9 to 623   tiling clone,   615/623
(98 %)
6 diff
(99.1 %id)
CD675851 eye, lens .e-u 8 to 606 1 to 599       599/599
(100 %)
0 diff
(100 %id)
CN414973 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e-u 309 to 947 1 to 639   tiling clone,   639/639
(100 %)
3 diff
(99.6 %id)
AK294270 amygdala .f 1 to 998 1 to 998 exact tiling clone,   998/1007
(99 %)
0 diff
(100 %id)
DC314515 amygdala .f 1 to 578 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DC371210   .g 1 to 558 1 to 558 exact tiling clone,   558/558
(100 %)
0 diff
(100 %id)
DC361163   .g 11 to 581 1 to 572   tiling clone,   572/572
(100 %)
1 diff
(99.9 %id)
AK127317 hippocampus .h 1 to 4174 2 to 4172   tiling clone, available from FLJ,   4172/4172
(100 %)
14 diff
(99.7 %id)
DA327811 hippocampus .h 1 to 487 2 to 489   capped   488/488
(100 %)
5 diff
(99.0 %id)
DB289878 uterus .h 757 to 1334 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DB309469 hippocampus .h 3594 to 4174 582 to 1       582/582
(100 %)
5 diff
(99.2 %id)
AI128623 heart .i 1 to 363 363 to 1   tiling clone,   363/363
(100 %)
4 diff
(98.9 %id)
BX955050   .i 305 to 660 356 to 1   tiling clone, Submitted on the opposite strand 356/356
(100 %)
2 diff
(99.5 %id)
AY429553   .i 472 to 906 1 to 435 G86R tiling clone,   435/435
(100 %)
1 diff
(99.8 %id)
CV361934 marrow .i 1194 to 1342 355 to 505   tiling clone,   476/509
(93 %)
37 diff
(92.8 %id)
DA313019 hippocampus .j-u 1 to 545 2 to 546 exact tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
BI062580 uterus_tumor .k-u 1 to 440 447 to 8 exact tiling clone,   440/447
(98 %)
0 diff
(100 %id)
T24601   .n-u -8 to 232 236 to 1 V2S Q3N F5C C7X G8K ... tiling clone,   236/270
(87 %)
7 diff
(97.5 %id)
TI_2194644248   Gene MTR, variant not shown              
TI_2194644260   Gene MTR, variant not shown              
TI_2194644433   Gene MTR, variant not shown              
TI_2194644434   Gene MTR, variant not shown              
TI_2194646619   Gene MTR, variant not shown              
BQ365637 placenta_normal Gene MTR, variant not shown              
BX641132 human uterus Gene MTR, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
CV340398 colon Gene MTR, variant not shown              
AV661204 corresponding non cancerous liver tissue Gene MTR, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV728277 hypothalamus Gene MTR, variant not shown         Suspected internal deletion, this clone was ignored    
AW277117 ovary, papillary serous ovarian metastasis Gene MTR, variant not shown         Suspected internal deletion, this clone was ignored    
BE779763 eye, retinoblastoma Gene MTR, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h, .i, .j-u, .k-u, .l-u, .m-u, .n-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI