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Gene MTMR9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
298 supporting clones for gene MTMR9 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA500713 brain .a 1 to 348 2 to 349   tiling clone, capped   348/348
(100 %)
0 diff
(100 %id)
AL547145 placenta, Placenta Cot 25-normalized .a 33 to 654 1 to 622   tiling clone,   622/622
(100 %)
2 diff
(99.7 %id)
DB017178 esophageal, tumor tissue .a 38 to 290 2 to 255   capped   254/254
(100 %)
3 diff
(98.9 %id)
DC376193 brain .a 65 to 567 1 to 505       505/505
(100 %)
2 diff
(99.7 %id)
DC346989 tongue, tumor tissue .a 66 to 546 1 to 484       484/484
(100 %)
5 diff
(99.0 %id)
DA743857   .a 67 to 440 2 to 375   capped   374/374
(100 %)
1 diff
(99.8 %id)
DB071815 testis .a 67 to 345 2 to 280   capped   279/279
(100 %)
0 diff
(100 %id)
DB072988 testis .a 67 to 344 2 to 279   capped   278/278
(100 %)
0 diff
(100 %id)
DB453692 testis .a 68 to 567 1 to 501       501/501
(100 %)
2 diff
(99.7 %id)
BG719051 testis .a 70 to 626 1 to 562       562/562
(100 %)
19 diff
(96.7 %id)
BC034990 testis .a 75 to 4521 1 to 4448 exact available from MGC, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 4448/4448
(100 %)
4 diff
(100.0 %id)
NM_015458.3   .a 75 to 7477 1 to 7403 exact RefSeq, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 7403/7403
(100 %)
0 diff
(100 %id)
AL561383 B cells from Burkitt lymphoma .a 91 to 1063 1 to 974       974/974
(100 %)
9 diff
(99.1 %id)
BQ883469 brain, neuroblastoma, cell line .a 104 to 882 1 to 784       784/948
(82 %)
19 diff
(98.0 %id)
DA784339 brain .a 108 to 412 2 to 306   capped   305/305
(100 %)
0 diff
(100 %id)
CT004450 T-Lymphocytes .a 148 to 602 1 to 456       456/456
(100 %)
3 diff
(99.4 %id)
BX475831   .a 363 to 981 1 to 619       619/619
(100 %)
4 diff
(99.4 %id)
DA707082   .a 373 to 948 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
AJ297823   .a 391 to 7471 1 to 7081 exact tiling clone,   7081/7081
(100 %)
0 diff
(100 %id)
AK000444   .a 392 to 3032 1 to 2642 K194R available from FLJ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2642/2642
(100 %)
3 diff
(99.9 %id)
AK223525   .a 392 to 2822 1 to 2432 K194R     2432/2432
(100 %)
3 diff
(99.9 %id)
DA799716 brain .a 393 to 808 2 to 418   capped   417/417
(100 %)
2 diff
(99.6 %id)
DB222900 trachea .a 399 to 972 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA397587 thalamus .a 401 to 852 2 to 453   capped   452/452
(100 %)
0 diff
(100 %id)
DB225153 trachea .a 401 to 976 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA785057 brain .a 404 to 983 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA787266 brain .a 404 to 990 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DA989866 synovial membrane tissue from rheumatioidarthritis .a 404 to 870 2 to 469   capped   468/468
(100 %)
2 diff
(99.6 %id)
DB165227 thymus .a 404 to 954 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA443001 tongue, tumor tissue .a 406 to 982 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DN991531 brain, whole brain .a 410 to 995 1 to 587       587/587
(100 %)
6 diff
(99.0 %id)
TI_891527357   .a 411 to 1109 711 to 9     Submitted on the opposite strand 703/1196
(58 %)
9 diff
(99.3 %id)
TI_891529329   .a 411 to 1220 228 to 1034       807/1235
(65 %)
12 diff
(99.1 %id)
TI_891529438   .a 411 to 1205 216 to 1004       789/1144
(68 %)
39 diff
(96.6 %id)
TI_891529934   .a 411 to 1212 26 to 821     Submitted on the opposite strand 796/1150
(69 %)
20 diff
(98.3 %id)
TI_927047543   .a 411 to 1454 32 to 1074       1043/1241
(84 %)
14 diff
(98.9 %id)
TI_927047764   .a 411 to 1454 25 to 1063       1039/1238
(83 %)
22 diff
(98.3 %id)
DA455766 tongue, tumor tissue .a 412 to 960 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB044259 testis .a 422 to 977 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DB049073 testis .a 422 to 983 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
CX759464 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 424 to 1164 1 to 742     Submitted on the opposite strand 742/742
(100 %)
2 diff
(99.8 %id)
BC093788 Liver, PCR rescued clones .a 431 to 2145 1 to 1716 exact     1716/1716
(100 %)
1 diff
(100.0 %id)
BC101623 Liver, PCR rescued clones .a 431 to 2145 1 to 1716 exact     1716/1716
(100 %)
2 diff
(99.9 %id)
BI459636 testis .a 436 to 1067 1 to 662       658/697
(94 %)
42 diff
(94.0 %id)
BC022003 testis .a 439 to 2397 7 to 1966 Q382L available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1960/1966
(99 %)
8 diff
(99.6 %id)
BG721272 testis .a 439 to 1205 7 to 780       774/814
(95 %)
21 diff
(97.5 %id)
TI_891527356   .a 462 to 1515 1055 to 8     Submitted on the opposite strand 1048/1178
(88 %)
10 diff
(99.2 %id)
TI_891529387   .a 469 to 1409 88 to 1028     Submitted on the opposite strand 941/1216
(77 %)
64 diff
(94.8 %id)
TI_1948080956   .a 471 to 1301 135 to 964       830/1191
(69 %)
33 diff
(97.3 %id)
TI_1948081133   .a 471 to 1204 130 to 866   fully sequenced,   737/866
(85 %)
11 diff
(98.8 %id)
TI_1948081308   .a 471 to 1277 132 to 947       816/1287
(63 %)
29 diff
(97.8 %id)
TI_1948081483   .a 471 to 1163 133 to 829   fully sequenced,   697/829
(84 %)
16 diff
(98.1 %id)
CV022977 mixed .a 473 to 1038 1 to 565       565/565
(100 %)
2 diff
(99.7 %id)
CV024493 mixed .a 473 to 1058 1 to 586       586/586
(100 %)
3 diff
(99.5 %id)
BF507520   .a 526 to 853 354 to 27   AAA   328/352
(93 %)
0 diff
(100 %id)
BF514661   .a 526 to 853 354 to 27   AAA   328/352
(93 %)
0 diff
(100 %id)
TI_891530476   .a 541 to 1586 14 to 1057       1044/1280
(81 %)
20 diff
(98.5 %id)
AW408895 fetal brain .a 654 to 951 304 to 7       298/356
(83 %)
5 diff
(98.6 %id)
AW409212 fetal brain .a 654 to 951 300 to 1       300/328
(91 %)
4 diff
(98.8 %id)
BG195041   .a 655 to 1444 1 to 788       788/817
(96 %)
15 diff
(98.2 %id)
TI_891530477   .a 712 to 1883 1 to 1164       1164/1261
(92 %)
18 diff
(98.6 %id)
DA796558 brain .a 713 to 1263 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
TI_891527355   .a 758 to 1782 1027 to 6     Submitted on the opposite strand 1022/1176
(86 %)
11 diff
(99.1 %id)
CN338341 embryonic stem cells, DMSO-treated H9 cellline .a 881 to 1234 9 to 362       354/362
(97 %)
0 diff
(100 %id)
BX349239   .a 912 to 1842 1 to 925       925/925
(100 %)
17 diff
(98.2 %id)
CX784624 human embryonic stem cells .a 954 to 1785 1 to 832       832/832
(100 %)
0 diff
(100 %id)
AA380660   .a 964 to 1118 1 to 155       155/155
(100 %)
0 diff
(100 %id)
BQ333818 marrow .a 971 to 1297 14 to 350       334/358
(93 %)
30 diff
(91.7 %id)
TI_927047638   .a 1020 to 2147 1187 to 68       1120/1264
(88 %)
14 diff
(98.9 %id)
TI_891530478   .a 1061 to 2071 1 to 1008       1008/1220
(82 %)
15 diff
(98.8 %id)
TI_927048041   .a 1063 to 2071 11 to 1015       1005/1232
(81 %)
14 diff
(98.9 %id)
TI_927047766   .a 1103 to 2147 1134 to 66       1069/1233
(86 %)
27 diff
(97.9 %id)
AW408955 fetal brain .a 1105 to 1399 1 to 294       294/300
(98 %)
5 diff
(98.4 %id)
TI_891529330   .a 1118 to 2147 1171 to 140     Submitted on the opposite strand 1032/1260
(81 %)
15 diff
(98.9 %id)
TI_891529388   .a 1121 to 2147 1091 to 67       1025/1225
(83 %)
8 diff
(99.4 %id)
TI_891529946   .a 1121 to 2147 1006 to 67     Submitted on the opposite strand 884/1136
(77 %)
31 diff
(97.3 %id)
TI_1948081484   .a 1133 to 2121 1124 to 127   fully sequenced,   998/1124
(88 %)
44 diff
(96.1 %id)
DA510357 brain .a 1146 to 1714 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
TI_891529942   .a 1157 to 2147 1060 to 70     Submitted on the opposite strand 991/1179
(84 %)
26 diff
(97.8 %id)
TI_1948081134   .a 1174 to 2121 1069 to 123   fully sequenced,   947/1069
(88 %)
33 diff
(97.0 %id)
TI_891529439   .a 1205 to 2147 1074 to 138     Submitted on the opposite strand 937/1205
(77 %)
14 diff
(98.9 %id)
TI_927047769   .a 1248 to 2147 970 to 70       901/1207
(74 %)
2 diff
(99.9 %id)
TI_927047767   .a 1258 to 2147 939 to 53       887/1157
(76 %)
3 diff
(99.8 %id)
BG212012   .a 1280 to 2044 763 to 14     Submitted on the opposite strand 750/821
(91 %)
41 diff
(95.1 %id)
TI_1948080957   .a 1280 to 2121 962 to 125       838/1303
(64 %)
9 diff
(99.4 %id)
AW409005 fetal brain .a 1359 to 1661 1 to 299       299/300
(99 %)
18 diff
(94.0 %id)
DA781021 brain .a 1362 to 1942 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
BF334345 colon .a 1368 to 1856 1 to 488       488/488
(100 %)
8 diff
(98.4 %id)
TI_1243018085   .a 1410 to 2147 808 to 68     Submitted on the opposite strand 741/808
(91 %)
43 diff
(94.7 %id)
TI_927048037   .a 1415 to 2147 1 to 733       733/1278
(57 %)
5 diff
(99.7 %id)
TI_891530474   .a 1421 to 2147 7 to 733       727/1233
(58 %)
7 diff
(99.5 %id)
BE300734 carcinoma cell line, cervix .a 1445 to 1809 1 to 364     Submitted on the opposite strand 364/434
(83 %)
4 diff
(99.1 %id)
TI_1948081309   .a 1468 to 2121 783 to 125       659/1379
(47 %)
5 diff
(99.7 %id)
DA514592 brain .a 1658 to 2206 2 to 552   capped   551/555
(99 %)
3 diff
(99.5 %id)
AI656160 pooled germ cell tumors .a 1673 to 2397 724 to 1       724/724
(100 %)
7 diff
(99.1 %id)
TI_927048038   .a 1680 to 2147 1 to 468       468/1271
(36 %)
10 diff
(99.3 %id)
TI_891530475   .a 1683 to 2147 1 to 465       465/1239
(37 %)
5 diff
(99.6 %id)
BQ438695 bone marrow, from acute myelogenous leukemia .a 1699 to 2454 1 to 762       762/789
(96 %)
23 diff
(97.1 %id)
AW409275 salivary gland .a 1754 to 1953 1 to 201       201/237
(84 %)
4 diff
(98.4 %id)
AW409278 salivary gland .a 1757 to 1953 205 to 6       200/229
(87 %)
0 diff
(100 %id)
AL080178 testis .a 1788 to 3843 1 to 2056   available from DKFZ, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 2056/2056
(100 %)
0 diff
(100 %id)
BP260173 heart .a 1809 to 2382 8 to 581       574/581
(98 %)
6 diff
(99.0 %id)
DA261988 caudate nucleus .a 1836 to 2320 2 to 487   capped   486/486
(100 %)
1 diff
(99.8 %id)
BQ428967 testis .a 2000 to 2786 1 to 795       795/796
(99 %)
22 diff
(97.3 %id)
TI_154135107   .a 2110 to 2941 898 to 81   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 818/950
(86 %)
59 diff
(93.8 %id)
DA408311 thalamus .a 2280 to 2833 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
AI218823 pooled .a 2300 to 2636 418 to 83   AAA   336/407
(82 %)
0 diff
(100 %id)
BU569254 testis .a 2356 to 3030 1 to 679       679/686
(98 %)
7 diff
(99.0 %id)
DA508355 brain .a 2362 to 2926 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA070274 cerebellum .a 2390 to 2932 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BP206616 coronary artery .a 2393 to 2974 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BX350709   .a 2400 to 3103 702 to 1       702/860
(81 %)
38 diff
(95.6 %id)
FN149493 breast carcinoma .a 2426 to 2534 105 to 2     Submitted on the opposite strand 104/105
(99 %)
0 diff
(100 %id)
BM470473 leiomyosarcoma, uterus .a 2477 to 3175 1 to 704       704/1113
(63 %)
15 diff
(98.7 %id)
Z42648 brain, total brain .a 2478 to 2786 1 to 309       309/309
(100 %)
2 diff
(99.4 %id)
DB519153 testis .a 2552 to 3030 1 to 479     Submitted on the opposite strand 479/480
(99 %)
1 diff
(99.8 %id)
BG563440 Liver .a 2565 to 3327 1 to 774       774/778
(99 %)
10 diff
(98.8 %id)
AW293844   .a 2644 to 3241 615 to 18   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 598/598
(100 %)
0 diff
(100 %id)
BP230390 brain .a 2652 to 3234 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA799766 brain .a 2676 to 3060 2 to 386   capped   385/385
(100 %)
0 diff
(100 %id)
BF699477 brain, primitive neuroectoderm .a 2714 to 3423 1 to 697       697/835
(83 %)
25 diff
(97.1 %id)
AL582699 B cells from Burkitt lymphoma .a 2793 to 3811 1012 to 1       1012/1014
(99 %)
28 diff
(97.3 %id)
BP204288 coronary artery .a 2797 to 3378 1 to 582       582/584
(99 %)
4 diff
(99.4 %id)
DB482405 hippocampus .a 2965 to 3454 1 to 491       491/491
(100 %)
2 diff
(99.6 %id)
FN156911 breast carcinoma .a 3037 to 3155 118 to 1     Submitted on the opposite strand 118/118
(100 %)
1 diff
(99.2 %id)
BE698236 uterus_tumor .a 3053 to 3292 1 to 240       240/240
(100 %)
0 diff
(100 %id)
BF794456 lymph, lymphoma, cell line .a 3077 to 3750 13 to 685       673/687
(97 %)
2 diff
(99.8 %id)
CN338342 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3136 to 3853 722 to 1     Submitted on the opposite strand 722/722
(100 %)
5 diff
(99.4 %id)
AL079416 testis .a 3156 to 3853 698 to 1       698/698
(100 %)
0 diff
(100 %id)
W68255 heart .a 3240 to 3494 1 to 255   fully sequenced,   255/255
(100 %)
3 diff
(98.9 %id)
AF124367 heart .a 3241 to 3843 605 to 1     Submitted on the opposite strand 605/614
(98 %)
1 diff
(99.9 %id)
AI654075 Kidney .a 3247 to 3852 606 to 1       606/606
(100 %)
5 diff
(99.2 %id)
BQ186833 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3271 to 3436 1 to 166   fully sequenced,   166/166
(100 %)
1 diff
(99.4 %id)
TI_151732719   .a 3271 to 3843 653 to 81   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 573/963
(59 %)
2 diff
(99.8 %id)
BP379777 uterus .a 3307 to 3891 1 to 584       584/585
(99 %)
12 diff
(98.0 %id)
AW629118 pooled .a 3313 to 3844 532 to 1       532/532
(100 %)
0 diff
(100 %id)
N66446 cochlea, ear .a 3330 to 3848 515 to 1       515/517
(99 %)
11 diff
(97.9 %id)
AW025530 Kidney .a 3349 to 3843 495 to 1       495/495
(100 %)
0 diff
(100 %id)
BF055088 pooled .a 3350 to 3846 497 to 1       497/497
(100 %)
5 diff
(99.0 %id)
AI333021 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3355 to 3792 444 to 7       438/444
(98 %)
0 diff
(100 %id)
DB551266 hippocampus .a 3358 to 3845 1 to 488     Submitted on the opposite strand 488/489
(99 %)
1 diff
(99.8 %id)
DB542196 hippocampus .a 3363 to 3845 1 to 483     Submitted on the opposite strand 483/484
(99 %)
1 diff
(99.8 %id)
DA527025 brain .a 3382 to 3941 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
BE219553 carcinoid, lung .a 3382 to 3843 462 to 1       462/462
(100 %)
0 diff
(100 %id)
BF438639 brain, glioblastoma (pooled) .a 3391 to 3843 453 to 1       453/453
(100 %)
0 diff
(100 %id)
BE674058 carcinoid, lung .a 3391 to 3847 457 to 1       457/457
(100 %)
1 diff
(99.8 %id)
BX096803 eye, retina .a 3400 to 3846 447 to 1     Submitted on the opposite strand 447/453
(98 %)
2 diff
(99.6 %id)
AA059169 eye, retina .a 3406 to 3813 409 to 1     Submitted on the opposite strand 409/409
(100 %)
4 diff
(99.1 %id)
CK299941 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3406 to 3861 456 to 1   fully sequenced,   456/456
(100 %)
1 diff
(99.8 %id)
DB538193 hippocampus .a 3411 to 3845 1 to 435     Submitted on the opposite strand 435/436
(99 %)
1 diff
(99.8 %id)
BE504298 carcinoid, lung .a 3411 to 3825 1 to 415     Submitted on the opposite strand 415/415
(100 %)
0 diff
(100 %id)
DB324877   .a 3417 to 3842 429 to 2       428/436
(98 %)
0 diff
(100 %id)
AA720596 germinal center B cell .a 3427 to 3852 426 to 1       426/426
(100 %)
0 diff
(100 %id)
W68256 heart .a 3464 to 3843 384 to 1   fully sequenced,   384/384
(100 %)
3 diff
(99.3 %id)
AI086268   .a 3466 to 3792 333 to 7       327/333
(98 %)
0 diff
(100 %id)
AW102669 pooled .a 3487 to 3845 358 to 1       358/358
(100 %)
1 diff
(99.8 %id)
AI675586 Prostate .a 3499 to 3840 351 to 10       342/351
(97 %)
0 diff
(100 %id)
BE887766 leiomyosarcoma, uterus .a 3500 to 3819 1 to 325       325/666
(48 %)
8 diff
(98.8 %id)
DA216942 brain .a 3518 to 4047 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA391680 thalamus .a 3527 to 4110 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA500660 brain .a 3533 to 4055 2 to 526   capped   525/525
(100 %)
2 diff
(99.7 %id)
FN158197 breast carcinoma .a 3533 to 3627 94 to 1     Submitted on the opposite strand 94/95
(98 %)
2 diff
(97.9 %id)
DA489134 brain .a 3536 to 4060 2 to 526   capped   525/525
(100 %)
1 diff
(99.9 %id)
AA534003 normal prostatic epithelial cells, Prostate .a 3537 to 3863 328 to 7       322/335
(96 %)
0 diff
(100 %id)
Z38810 brain, total brain .a 3540 to 3843 304 to 1       304/304
(100 %)
1 diff
(99.7 %id)
FN145966 breast carcinoma .a 3543 to 3641 1 to 99       99/99
(100 %)
2 diff
(98.0 %id)
AW136936   .a 3582 to 3860 279 to 1       279/279
(100 %)
7 diff
(97.5 %id)
DA793377 brain .a 3614 to 4155 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA171427 amygdala .a 3623 to 4182 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
AW409032 fetal brain .a 3646 to 3835 10 to 199   AAA   190/207
(91 %)
3 diff
(98.6 %id)
FN081081 breast carcinoma .a 3724 to 3802 78 to 1     Submitted on the opposite strand 78/78
(100 %)
1 diff
(98.8 %id)
DA320121 hippocampus .a 3734 to 4312 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
BU536047 mixed (pool of 40 RNAs) .a 3737 to 3867 1 to 135       135/141
(95 %)
11 diff
(92.2 %id)
DA518012 brain .a 3752 to 4283 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
DA214076 brain .a 3770 to 4313 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BM461982 leiomyosarcoma, uterus .a 3823 to 4440 1 to 614       614/927
(66 %)
19 diff
(98.0 %id)
DA396520 thalamus .a 3842 to 4431 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DA543892   .a 3842 to 4400 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA788141 brain .a 3843 to 4375 2 to 534   capped   533/533
(100 %)
2 diff
(99.7 %id)
CB216853 normal endometrium, mid-secretory phase,cycle day 23, uterus .a 3899 to 4531 1 to 633       633/633
(100 %)
2 diff
(99.7 %id)
DB259230 uterus .a 3915 to 4473 2 to 563   capped   562/562
(100 %)
4 diff
(99.3 %id)
BF669629 brain, primitive neuroectoderm .a 3938 to 4606 1 to 685       685/809
(84 %)
73 diff
(91.0 %id)
BF669796 brain, primitive neuroectoderm .a 3938 to 4600 1 to 657       657/657
(100 %)
15 diff
(97.8 %id)
AW409315 salivary gland .a 3950 to 4172 1 to 224       224/235
(95 %)
3 diff
(98.8 %id)
BQ946522 leiomyosarcoma, uterus .a 4004 to 4887 1 to 890       890/909
(97 %)
17 diff
(98.2 %id)
DA037581   .a 4069 to 4615 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
CF553019 Pooled muscle (cardiac and skeletal) .a 4258 to 5090 24 to 869       846/874
(96 %)
26 diff
(97.1 %id)
BU621768 cell lines, Chondrosarcoma .a 4278 to 4525 266 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 248/248
(100 %)
1 diff
(99.6 %id)
DT215578 brain .a 4312 to 4885 1 to 573       573/573
(100 %)
4 diff
(99.4 %id)
DA510259 brain .a 4346 to 4905 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BG232021 blood, lymphocyte .a 4552 to 5093 542 to 1       542/542
(100 %)
1 diff
(99.9 %id)
AF052099 brain .a 4566 to 6303 1 to 1737   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 1737/1737
(100 %)
2 diff
(99.9 %id)
F13326 brain, total brain .a 4566 to 4901 1 to 336       336/336
(100 %)
1 diff
(99.8 %id)
F10924 brain, total brain .a 5977 to 6303 325 to 1       325/325
(100 %)
1 diff
(99.7 %id)
DB316999 brain .a 6561 to 7069 509 to 1       509/509
(100 %)
0 diff
(100 %id)
DB470175 hippocampus .b 1 to 450 1 to 446   tiling clone,   446/446
(100 %)
10 diff
(97.8 %id)
DB473419 hippocampus .b 1 to 490 1 to 490       490/490
(100 %)
2 diff
(99.6 %id)
AK294463 amygdala .b 53 to 1960 1 to 1908 exact tiling clone,   1908/1908
(100 %)
0 diff
(100 %id)
DC317585 amygdala .b 53 to 601 1 to 549       549/549
(100 %)
0 diff
(100 %id)
BX538176 human uterus endothel primary cell culture .c 1 to 3486 1 to 3487 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 3487/3487
(100 %)
2 diff
(100.0 %id)
DA303201 hippocampus .d 1 to 591 2 to 592   tiling clone, capped   591/591
(100 %)
0 diff
(100 %id)
BG028793 Bone, osteosarcoma, cell line .d 356 to 976 1 to 621   tiling clone,   621/921
(67 %)
3 diff
(99.7 %id)
CD523450 pooled .d 378 to 1038 1 to 661       661/725
(91 %)
9 diff
(98.8 %id)
BM712717 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 493 to 926 1 to 434   fully sequenced, Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 434/434
(100 %)
0 diff
(100 %id)
BM676060 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 865 to 1156 311 to 19   tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 293/293
(100 %)
3 diff
(99.0 %id)
BY795636 eye .e 1 to 606 1 to 606 exact tiling clone,   606/606
(100 %)
1 diff
(99.9 %id)
DA569174 whole embryo, mainly head .f-u 1 to 799 2 to 802 I8M tiling clone, capped   801/801
(100 %)
9 diff
(98.9 %id)
T77646 whole brain .f-u 13 to 372 1 to 366       366/367
(99 %)
14 diff
(96.2 %id)
CD653703 Embryonic Stem cells .f-u 36 to 803 12 to 775 exact     764/810
(94 %)
15 diff
(98.2 %id)
BE929404 placenta_normal .f-u 146 to 262 1 to 119       119/119
(100 %)
10 diff
(91.6 %id)
H89062 cochlea, ear .f-u 150 to 516 1 to 368       368/369
(99 %)
4 diff
(99.0 %id)
AW237318 Kidney .f-u 185 to 512 329 to 1       329/329
(100 %)
1 diff
(99.7 %id)
G36566   .f-u 215 to 505 297 to 8     Submitted on the opposite strand 290/297
(97 %)
0 diff
(100 %id)
N49250 multiple sclerosis lesions .f-u 215 to 505 297 to 8       290/297
(97 %)
0 diff
(100 %id)
BG569105 Liver .f-u 389 to 1183 1 to 804 L27T R28*     804/878
(91 %)
63 diff
(92.9 %id)
BM698290 eye, fetal eyes .f-u 394 to 869 1 to 476 exact tiling clone, Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 476/476
(100 %)
0 diff
(100 %id)
DA488967 brain .f-u 410 to 943 19 to 553 exact capped   535/552
(96 %)
6 diff
(99.0 %id)
BE544046 cervical carcinoma cell line, cervix .f-u 473 to 1118 1 to 646 exact     646/647
(99 %)
4 diff
(99.4 %id)
CB155106 brain .f-u 500 to 1033 1 to 534 Q5R K40R     534/534
(100 %)
2 diff
(99.7 %id)
BG740897 skin .f-u 612 to 1379 1 to 768       768/768
(100 %)
10 diff
(98.7 %id)
BF694554 muscle (skeletal) .f-u 702 to 1418 1 to 695   available from MGC,   695/828
(83 %)
63 diff
(92.4 %id)
BC017985 skeletal muscle .f-u 703 to 1716 1 to 1008   available from MGC, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 1008/1008
(100 %)
4 diff
(99.7 %id)
AA310015   .f-u 706 to 1156 1 to 448       448/448
(100 %)
2 diff
(99.6 %id)
AV729353 hypothalamus .f-u 717 to 1428 1 to 711       711/711
(100 %)
21 diff
(97.1 %id)
CN334661 embryonic stem cells, cell lines H1, H7, andH9 .f-u 756 to 1362 41 to 647   tiling clone,   607/647
(93 %)
6 diff
(99.1 %id)
CD514465 White Matter .f-u 872 to 1667 1 to 803       803/857
(93 %)
19 diff
(97.8 %id)
BE005816 breast_normal .f-u 901 to 1340 1 to 449       449/449
(100 %)
7 diff
(98.5 %id)
BE005611 breast_normal .f-u 932 to 1352 1 to 432       432/433
(99 %)
13 diff
(97.0 %id)
EC501451 Prostate .f-u 1026 to 1140 1 to 115       115/115
(100 %)
5 diff
(95.7 %id)
DB355778 whole embryo, mainly head .f-u 1164 to 1721 563 to 1       563/563
(100 %)
10 diff
(98.3 %id)
TI_154028848   .f-u 1228 to 1721 50 to 539   AAA Submitted on the opposite strand 490/539
(90 %)
5 diff
(99.1 %id)
CA442081 lung, Lung Focal Fibrosis .f-u 1231 to 1721 3 to 490   AAA Submitted on the opposite strand 488/490
(99 %)
6 diff
(98.8 %id)
AL119984 amygdala .f-u 1242 to 1922 1 to 683   tiling clone,   683/683
(100 %)
3 diff
(99.6 %id)
CN484909 eye .f-u 1273 to 1721 1 to 449   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 449/449
(100 %)
0 diff
(100 %id)
EC500230 Prostate .f-u 1319 to 1422 1 to 103       103/103
(100 %)
1 diff
(99.1 %id)
AA451612   .f-u 1319 to 1722 1 to 402       402/402
(100 %)
2 diff
(99.6 %id)
T26378   .f-u 1340 to 1721 382 to 1       382/396
(96 %)
18 diff
(95.5 %id)
EC500498 Prostate .f-u 1352 to 1462 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
BM666997 eye, fetal eyes .f-u 1653 to 2189 552 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 537/537
(100 %)
4 diff
(99.3 %id)
AA062979 pineal gland .f-u 1688 to 2289 15 to 614     Submitted on the opposite strand 600/633
(94 %)
6 diff
(99.1 %id)
BP429791   .f-u 1755 to 2089 1 to 335       335/335
(100 %)
4 diff
(98.9 %id)
AW601612 breast .f-u 1772 to 2390 622 to 10       613/622
(98 %)
0 diff
(100 %id)
BE069498 breast .f-u 1781 to 2292 517 to 6     Submitted on the opposite strand 512/517
(99 %)
0 diff
(100 %id)
BP193409 brain .f-u 1799 to 2379 1 to 581       581/581
(100 %)
0 diff
(100 %id)
AW409147 salivary gland .f-u 1862 to 2076 1 to 222       222/223
(99 %)
13 diff
(94.2 %id)
AA223083   .f-u 1890 to 2422 1 to 533       533/533
(100 %)
19 diff
(96.5 %id)
DN949246 insulinoma, Pancreas .f-u 1914 to 2214 11 to 311       301/311
(96 %)
6 diff
(98.1 %id)
DN949223 Pancreas, Purified pancreatic islet .f-u 1918 to 2346 1 to 429       429/429
(100 %)
2 diff
(99.6 %id)
BM313294 Pancreas, Purified pancreatic islet .f-u 1926 to 2420 1 to 495       495/495
(100 %)
2 diff
(99.6 %id)
AW886028 ovary .f-u 1949 to 2393 10 to 454       445/454
(98 %)
6 diff
(98.7 %id)
AW886040 ovary .f-u 1949 to 2337 9 to 397       389/397
(97 %)
6 diff
(98.5 %id)
BE833870 ovary .f-u 1949 to 2322 28 to 401       374/401
(93 %)
6 diff
(98.6 %id)
BE833872 ovary .f-u 1949 to 2319 10 to 380       371/380
(97 %)
6 diff
(98.5 %id)
AW886044 ovary .f-u 1956 to 2429 1 to 475       475/475
(100 %)
8 diff
(98.4 %id)
AW886029 ovary .f-u 1962 to 2421 1 to 460       460/460
(100 %)
7 diff
(98.5 %id)
AW580888 leiomios .f-u 1977 to 2432 466 to 5       462/466
(99 %)
0 diff
(100 %id)
AW886041 ovary .f-u 1986 to 2427 7 to 448       442/448
(98 %)
6 diff
(98.7 %id)
BF431224 Kidney .f-u 1986 to 2490 508 to 4       505/508
(99 %)
0 diff
(100 %id)
AA450209   .f-u 2041 to 2490 450 to 1   tiling clone,   450/450
(100 %)
0 diff
(100 %id)
AV730624 hypothalamus .f-u 2042 to 2439 1 to 391       391/398
(98 %)
10 diff
(97.5 %id)
BI668023 brain, hypothalamus .f-u 2047 to 2602 1 to 556       556/558
(99 %)
7 diff
(98.8 %id)
TI_44346432   .f-u 2051 to 2602 98 to 649       552/651
(84 %)
5 diff
(99.3 %id)
BM727076 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f-u 2053 to 2563 1 to 511   fully sequenced,   511/511
(100 %)
2 diff
(99.7 %id)
AW884675 ovary .f-u 2068 to 2415 350 to 2       349/357
(97 %)
0 diff
(100 %id)
AA865550 pooled germ cell tumors .f-u 2101 to 2490 392 to 3       390/392
(99 %)
0 diff
(100 %id)
AA845838 Spleen .f-u 2158 to 2487 342 to 13   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 330/330
(100 %)
3 diff
(99.1 %id)
CX756103 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f-u 2191 to 2887 727 to 31   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 697/697
(100 %)
3 diff
(99.6 %id)
CR748320 multiple sclerosis lesions .f-u 2308 to 2878 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
N94789 multiple sclerosis lesions .f-u 2311 to 2618 1 to 309   fully sequenced,   309/309
(100 %)
1 diff
(99.7 %id)
BU631532 cell lines, Chondrosarcoma .f-u 2321 to 2895 594 to 19   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 576/576
(100 %)
2 diff
(99.7 %id)
AI401602 brain, glioblastoma (pooled) .f-u 2331 to 2895 565 to 1       565/565
(100 %)
1 diff
(99.9 %id)
AW014788   .f-u 2331 to 2890 574 to 15   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 560/560
(100 %)
1 diff
(99.9 %id)
CK822270 Pancreas, Purified pancreatic islet .f-u 2345 to 2893 550 to 2     Submitted on the opposite strand 549/550
(99 %)
0 diff
(100 %id)
EC511831 Prostate .f-u 2351 to 2459 1 to 109       109/109
(100 %)
0 diff
(100 %id)
AI422149 brain, glioblastoma (pooled) .f-u 2399 to 2895 497 to 1       497/497
(100 %)
0 diff
(100 %id)
BM313016 Pancreas, Purified pancreatic islet .f-u 2410 to 2889 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AA418476 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 2423 to 2881 1 to 458       458/458
(100 %)
2 diff
(99.6 %id)
AA418457 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 2423 to 2895 1 to 473   fully sequenced, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 473/473
(100 %)
0 diff
(100 %id)
BE672954 pooled germ cell tumors .f-u 2447 to 2913 468 to 2   tiling clone,   467/468
(99 %)
0 diff
(100 %id)
BF115337 brain, glioblastoma (pooled) .f-u 2479 to 2911 433 to 1       433/433
(100 %)
2 diff
(99.6 %id)
AA194827 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 2496 to 2860 367 to 1       367/457
(80 %)
6 diff
(98.7 %id)
AA904667 pooled .f-u 2511 to 2889 379 to 1       379/379
(100 %)
0 diff
(100 %id)
AI193832 lung .f-u 2520 to 2889 371 to 2       370/371
(99 %)
0 diff
(100 %id)
BU740916 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f-u 2533 to 2903 376 to 6   fully sequenced,   371/376
(98 %)
7 diff
(98.2 %id)
DN949267 insulinoma, Pancreas .f-u 2545 to 2890 420 to 75   AAA Submitted on the opposite strand 346/346
(100 %)
0 diff
(100 %id)
BF003100 Prostate .f-u 2560 to 2895 336 to 1       336/336
(100 %)
1 diff
(99.8 %id)
N63489 multiple sclerosis lesions .f-u 2588 to 2887 310 to 1   fully sequenced,   310/310
(100 %)
0 diff
(100 %id)
AI208394   .f-u 2598 to 2898 302 to 2       301/305
(98 %)
0 diff
(100 %id)
AA062617 pineal gland .f-u 2613 to 2831 220 to 1     Submitted on the opposite strand 220/220
(100 %)
1 diff
(99.6 %id)
AA626938   .f-u 2646 to 2889 245 to 2       244/245
(99 %)
0 diff
(100 %id)
AA435505   .f-u 2649 to 2893 246 to 2       245/246
(99 %)
0 diff
(100 %id)
AA418387 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 2654 to 2895 257 to 16   fully sequenced, AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 242/242
(100 %)
0 diff
(100 %id)
DN949279 Pancreas, Purified pancreatic islet .f-u 2655 to 2890 249 to 14   AAA Submitted on the opposite strand 236/236
(100 %)
0 diff
(100 %id)
EC472709 Prostate .f-u 2790 to 2887 97 to 1       97/97
(100 %)
1 diff
(99.0 %id)
AW409007 fetal brain .g 1 to 443 1 to 447   tiling clone,   447/520
(85 %)
28 diff
(94.7 %id)
DA829171 placenta .g 384 to 1182 2 to 809 exact tiling clone, capped   808/816
(99 %)
14 diff
(98.3 %id)
AK022071 whole embryo, mainly body .g 592 to 2789 1 to 2201   tiling clone, available from FLJ,   2201/2201
(100 %)
10 diff
(99.6 %id)
AU120884 whole embryo, mainly body .g 593 to 1348 2 to 751   capped   750/830
(90 %)
12 diff
(98.6 %id)
BQ420790 embryonal carcinoma, cell line, testis .g 759 to 1839 1 to 1083   tiling clone,   1083/1084
(99 %)
42 diff
(96.2 %id)
AA897056 Spleen .g 795 to 1095 301 to 1       301/301
(100 %)
0 diff
(100 %id)
AW408975 fetal brain .g 1309 to 1509 200 to 1       200/200
(100 %)
2 diff
(99.0 %id)
AW409134 salivary gland .g 1494 to 1687 211 to 18   tiling clone,   194/212
(91 %)
0 diff
(100 %id)
DB373884 placenta .g 2244 to 2759 518 to 1   tiling clone,   518/518
(100 %)
20 diff
(96.2 %id)
AU146830 whole embryo, mainly body .g 2251 to 2789 538 to 1   tiling clone,   538/557
(96 %)
19 diff
(96.6 %id)
BF840480 head_neck .g 2309 to 2635 351 to 25     Submitted on the opposite strand 327/369
(88 %)
0 diff
(100 %id)
AW409274 salivary gland .g 2504 to 2756 270 to 18       253/304
(83 %)
0 diff
(100 %id)
BQ441275 testis .h 1 to 730 1 to 732 N36A P37L C39T tiling clone,   732/809
(90 %)
58 diff
(92.9 %id)
CA390271 eye, RPE/choroid .h 119 to 703 1 to 585   tiling clone,   585/585
(100 %)
1 diff
(99.9 %id)
AW409280 salivary gland .h 205 to 540 397 to 62       336/420
(80 %)
0 diff
(100 %id)
DC309574 cerebellum .i-u 1 to 595 1 to 594 N54T I55S D56T A57P I58S ... tiling clone,   594/603
(98 %)
5 diff
(99.2 %id)
DA102828 cerebellum .i-u 53 to 595 2 to 545 exact tiling clone, capped   544/546
(99 %)
5 diff
(99.1 %id)
DB092937 testis .j 1 to 553 2 to 556 exact tiling clone, capped   555/555
(100 %)
2 diff
(99.7 %id)
AK303543 thymus Gene MTMR9, variant not shown         Suspected internal deletion, this clone was ignored    
DB303465 amygdala Gene MTMR9, variant not shown         This clone was ignored    
DA193670 amygdala Gene MTMR9, variant not shown       capped This clone was ignored    
AA831688 germinal center B cell Gene MTMR9, variant not shown         Suspected internal deletion, this clone was ignored    
BF795765 lymph, lymphoma, cell line Gene MTMR9, variant not shown         Suspected internal deletion, this clone was ignored    
DC409961 thymus Gene MTMR9, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i-u, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI