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Gene MTL5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
113 supporting clones for gene MTL5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB054850 testis .a 1 to 418 2 to 419   tiling clone, capped   418/418
(100 %)
1 diff
(99.8 %id)
BG772890 testis .a 26 to 653 1 to 627       627/627
(100 %)
7 diff
(98.9 %id)
NM_004923.3   .a 44 to 2578 1 to 2535 exact RefSeq,   2535/2535
(100 %)
0 diff
(100 %id)
BM790577 stomach .a 44 to 580 1 to 537       537/537
(100 %)
0 diff
(100 %id)
BQ225377 epithelioid carcinoma, Pancreas .a 55 to 792 1 to 743       743/919
(80 %)
22 diff
(97.7 %id)
CD358741 testis .a 56 to 814 30 to 793       764/897
(85 %)
23 diff
(97.5 %id)
BQ641413 eye, normal pigmented retinal epithelium .a 59 to 828 24 to 806       783/1015
(77 %)
33 diff
(96.8 %id)
DN998005 breast cancer, Mammary gland (cancer tissue) .a 65 to 786 1 to 722       722/722
(100 %)
4 diff
(99.5 %id)
TI_154076699   .a 65 to 610 73 to 620     Submitted on the opposite strand 548/621
(88 %)
42 diff
(93.3 %id)
CD251919 testis .a 70 to 440 1 to 380       380/957
(39 %)
11 diff
(98.9 %id)
BC064579 Brain, adult medulla .a 77 to 2576 1 to 2500 exact tiling clone, available from MGC, AAA   2500/2500
(100 %)
0 diff
(100 %id)
BM563204 brain, medulla .a 77 to 932 1 to 863       863/1168
(73 %)
25 diff
(97.9 %id)
BG723145 testis .a 98 to 575 1 to 494       494/1047
(47 %)
34 diff
(96.8 %id)
DB048677 testis .a 105 to 685 2 to 596   capped   595/595
(100 %)
14 diff
(97.7 %id)
BG773009 testis .a 108 to 934 1 to 832       834/888
(93 %)
31 diff
(96.6 %id)
DB454608 testis .a 118 to 595 1 to 478       478/478
(100 %)
0 diff
(100 %id)
CD557485 testis .a 121 to 934 1 to 818       818/929
(88 %)
16 diff
(98.3 %id)
AA976683 carcinoid, lung .a 149 to 570 1 to 418     Submitted on the opposite strand 418/418
(100 %)
14 diff
(96.7 %id)
BE218705 carcinoid, lung .a 149 to 384 1 to 236     Submitted on the opposite strand 236/240
(98 %)
1 diff
(99.6 %id)
EC543123 Prostate .a 563 to 671 1 to 108       108/108
(100 %)
1 diff
(99.1 %id)
AF012383 testis .a 650 to 913 3 to 266       264/266
(99 %)
7 diff
(97.4 %id)
FN175649 breast carcinoma .a 661 to 735 1 to 74       74/74
(100 %)
3 diff
(96.0 %id)
DB028473 testis .a 920 to 1469 2 to 552   capped   551/552
(99 %)
3 diff
(99.5 %id)
AL040101 testis .a 1460 to 1791 1 to 332       332/333
(99 %)
1 diff
(99.7 %id)
BX095824   .a 1475 to 2232 1 to 759       759/759
(100 %)
1 diff
(99.9 %id)
T19339   .a 1741 to 1963 1 to 223       223/223
(100 %)
1 diff
(99.6 %id)
CD358035 testis .a 1893 to 2573 1 to 680   AAA   680/680
(100 %)
2 diff
(99.8 %id)
BI520646 brain, medulla .a 1896 to 2503 655 to 23       633/772
(81 %)
0 diff
(100 %id)
TI_43963801   .a 1896 to 2503 655 to 23       633/772
(81 %)
0 diff
(100 %id)
CK821086 Islets of Langerhans, Pancreas .a 1972 to 2546 1 to 575       575/575
(100 %)
0 diff
(100 %id)
BI793224 Islets of Langerhans, Pancreas .a 1988 to 2323 1 to 336       336/336
(100 %)
0 diff
(100 %id)
CK821085 Islets of Langerhans, Pancreas .a 2010 to 2578 570 to 2       569/570
(99 %)
0 diff
(100 %id)
DN912746   .a 2033 to 2251 228 to 10       219/228
(96 %)
0 diff
(100 %id)
DN912747   .a 2033 to 2251 1 to 219       219/229
(95 %)
3 diff
(98.7 %id)
AI874249 ovary, tumor, 5 pooled (see description) .a 2059 to 2576 518 to 1       518/518
(100 %)
0 diff
(100 %id)
BI711797 insulinoma, Pancreas .a 2063 to 2488 1 to 426       426/426
(100 %)
5 diff
(98.9 %id)
CK903304 insulinoma, Pancreas .a 2063 to 2576 1 to 514       514/514
(100 %)
5 diff
(99.1 %id)
BQ549934 insulinoma, Pancreas .a 2063 to 2490 1 to 428       428/428
(100 %)
5 diff
(98.9 %id)
CK903303 insulinoma, Pancreas .a 2070 to 2576 524 to 18   AAA   507/513
(98 %)
0 diff
(100 %id)
AW293246   .a 2087 to 2576 507 to 18   AAA   490/490
(100 %)
0 diff
(100 %id)
BI711510 insulinoma, Pancreas .a 2089 to 2576 505 to 18   AAA   488/488
(100 %)
0 diff
(100 %id)
AW236823 pooled germ cell tumors .a 2092 to 2577 486 to 1       486/487
(99 %)
0 diff
(100 %id)
AW102615 pooled .a 2107 to 2578 473 to 2       472/473
(99 %)
0 diff
(100 %id)
AI652317 pooled germ cell tumors .a 2124 to 2576 453 to 1       453/453
(100 %)
0 diff
(100 %id)
BI792942 Islets of Langerhans, Pancreas .a 2145 to 2578 435 to 2       434/435
(99 %)
0 diff
(100 %id)
AL040102 testis .a 2436 to 2576 170 to 30   AAA   141/142
(99 %)
1 diff
(99.3 %id)
NM_001039656.1   .b 1 to 3625 1 to 3625 exact RefSeq,   3625/3625
(100 %)
0 diff
(100 %id)
DA733200   .b 55 to 643 2 to 588   tiling clone, capped   587/587
(100 %)
7 diff
(98.9 %id)
AK292358 testis .b 61 to 1295 1 to 1235 C223R     1235/1235
(100 %)
1 diff
(100.0 %id)
BC027593 testis .b 65 to 1164 1 to 1100 exact tiling clone, available from MGC, AAA   1100/1100
(100 %)
3 diff
(99.8 %id)
DB520023 testis .b 709 to 1164 1 to 456     Submitted on the opposite strand 456/456
(100 %)
0 diff
(100 %id)
AW270088 pooled .b 853 to 1160 312 to 5       308/312
(98 %)
0 diff
(100 %id)
BM676207 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1052 to 1677 644 to 19   tiling clone, AAA   626/635
(98 %)
8 diff
(98.8 %id)
TI_151776562   .b 1061 to 1560 78 to 580       503/1168
(43 %)
11 diff
(99.1 %id)
CN424065 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1578 to 2137 7 to 566   tiling clone,   560/566
(98 %)
0 diff
(100 %id)
DB365033   .b 3114 to 3625 512 to 1   tiling clone,   512/514
(99 %)
7 diff
(98.7 %id)
AK074817   .c 1 to 3494 2 to 3495   tiling clone, available from FLJ,   3495/3495
(100 %)
4 diff
(99.9 %id)
BJ992019 hepatoblastoma .c 2110 to 2568 1 to 459       459/459
(100 %)
1 diff
(99.8 %id)
AI912080 carcinoid, lung .c 2920 to 3386 1 to 467     Submitted on the opposite strand 467/467
(100 %)
1 diff
(99.8 %id)
AA932713 carcinoid, lung .c 2932 to 3283 1 to 351     Submitted on the opposite strand 351/351
(100 %)
1 diff
(99.8 %id)
AI281991 carcinoid, lung .c 2932 to 3412 1 to 480     Submitted on the opposite strand 480/480
(100 %)
2 diff
(99.6 %id)
BE220085 carcinoid, lung .c 2932 to 3386 1 to 455     Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
BE467611 carcinoid, lung .c 2932 to 3448 1 to 517     Submitted on the opposite strand 517/517
(100 %)
0 diff
(100 %id)
BJ992020 hepatoblastoma .c 2988 to 3463 476 to 1       476/476
(100 %)
0 diff
(100 %id)
BX106937 carcinoid, lung .c 2989 to 3486 498 to 1     Submitted on the opposite strand 498/498
(100 %)
1 diff
(99.8 %id)
AW972010   .c 3048 to 3493 448 to 1     Submitted on the opposite strand 448/480
(93 %)
15 diff
(96.9 %id)
AA975648 Kidney, kidney tumor .c 3093 to 3488 396 to 1       396/396
(100 %)
0 diff
(100 %id)
AI914451 pooled .c 3096 to 3362 267 to 1       267/267
(100 %)
0 diff
(100 %id)
CR743436 carcinoid, lung .c 3104 to 3485 382 to 1     Submitted on the opposite strand 382/382
(100 %)
0 diff
(100 %id)
CR743489 carcinoid, lung .c 3114 to 3486 373 to 1     Submitted on the opposite strand 373/373
(100 %)
0 diff
(100 %id)
AA514660 colon .c 3201 to 3494 296 to 3   tiling clone,   294/296
(99 %)
0 diff
(100 %id)
BC054047 Uterus, leiomyosarcoma .d 1 to 647 1 to 647 Y214* tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 647/706
(91 %)
3 diff
(99.6 %id)
BU162391 leiomyosarcoma, uterus .d 1 to 642 12 to 653   available from MGC,   642/898
(71 %)
7 diff
(99.3 %id)
AI307797 2 pooled tumors (clear cell type), Kidney .d 215 to 647 442 to 11   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 432/442
(97 %)
4 diff
(99.1 %id)
BU588071 mixed (pool of 40 RNAs) .d 378 to 647 1 to 270   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 270/299
(90 %)
6 diff
(98.0 %id)
BC070301 Pooled, 40 cell lines .d 381 to 647 1 to 267   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 267/291
(91 %)
6 diff
(98.0 %id)
BG184200   .d 429 to 637 17 to 227   AAA   211/258
(81 %)
3 diff
(98.9 %id)
BX476847   .d 529 to 965 1 to 437   tiling clone,   437/437
(100 %)
0 diff
(100 %id)
BX476848   .d 1834 to 2257 495 to 72   tiling clone, AAA   424/424
(100 %)
2 diff
(99.6 %id)
TI_57176368   .e 1 to 844 71 to 913 F9V tiling clone,   843/913
(92 %)
11 diff
(98.8 %id)
BI829802 brain, medulla .e 2 to 844 1 to 842   tiling clone,   842/842
(100 %)
6 diff
(99.3 %id)
AA846474   .e 532 to 958 429 to 4       426/429
(99 %)
0 diff
(100 %id)
DB517060 testis .e 542 to 958 1 to 417     Submitted on the opposite strand 417/417
(100 %)
7 diff
(98.4 %id)
AW629183 pooled .e 542 to 958 419 to 3       417/419
(99 %)
0 diff
(100 %id)
AA994165   .e 547 to 959 414 to 4       411/414
(99 %)
0 diff
(100 %id)
AA758741   .e 563 to 958 398 to 4       395/398
(99 %)
0 diff
(100 %id)
AI796344 2 pooled tumors (clear cell type), Kidney .e 611 to 963 355 to 3   tiling clone,   353/355
(99 %)
0 diff
(100 %id)
BE501038 pooled germ cell tumors .e 616 to 961 346 to 1       346/346
(100 %)
0 diff
(100 %id)
AI538405 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 630 to 961 363 to 32   AAA   332/332
(100 %)
4 diff
(98.8 %id)
AI377830 pooled .e 685 to 963 280 to 2       279/280
(99 %)
0 diff
(100 %id)
AI827726 pooled .e 685 to 963 280 to 2       279/280
(99 %)
0 diff
(100 %id)
AW511334 pooled .e 685 to 963 280 to 2       279/280
(99 %)
0 diff
(100 %id)
AA903758 pooled germ cell tumors .e 702 to 963 264 to 3       262/264
(99 %)
0 diff
(100 %id)
AA970002 pooled .e 704 to 958 258 to 4       255/258
(98 %)
0 diff
(100 %id)
CX163838 human embryonic stem cells differentiated toan early endodermal cell type .f 1 to 724 1 to 724 exact tiling clone,   724/724
(100 %)
1 diff
(99.9 %id)
CD642226 Embryonic Stem cells .g-u 1 to 770 8 to 772   tiling clone,   765/841
(90 %)
16 diff
(98.1 %id)
AK128308 thymus .g-u 368 to 4632 1 to 4266 exact tiling clone, available from FLJ,   4266/4266
(100 %)
2 diff
(100.0 %id)
DB144414 thymus .g-u 369 to 900 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
CN286462 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .g-u 643 to 1252 1 to 610       610/610
(100 %)
1 diff
(99.9 %id)
DA344372 substantia nigra .g-u 1945 to 2478 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB345624 thymus .g-u 4083 to 4632 550 to 1       550/550
(100 %)
0 diff
(100 %id)
BG272409 head/neck, nasopharyngeal carcinoma .h 1 to 394 393 to 2 exact tiling clone,   392/420
(93 %)
0 diff
(100 %id)
FN060697 breast carcinoma .h 319 to 384 1 to 68   tiling clone,   68/69
(98 %)
3 diff
(95.7 %id)
CN424066 embryonic stem cells, DMSO-treated H9 cellline .i 1 to 657 1 to 657 exact tiling clone,   657/657
(100 %)
0 diff
(100 %id)
AI968415 pooled germ cell tumors .j 1 to 644 642 to 1 exact tiling clone,   642/642
(100 %)
2 diff
(99.7 %id)
AI968123 pooled germ cell tumors .j 136 to 644 509 to 1       509/509
(100 %)
0 diff
(100 %id)
AI624835 pooled germ cell tumors .j 172 to 645 474 to 1   tiling clone,   474/474
(100 %)
0 diff
(100 %id)
AI271740 Kidney .k-u 1 to 373 373 to 1 exact tiling clone,   373/373
(100 %)
0 diff
(100 %id)
FN133546 breast carcinoma .k-u 32 to 128 1 to 97       97/99
(97 %)
6 diff
(94.0 %id)
BX093672 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .k-u 78 to 373 310 to 15   AAA   296/306
(96 %)
0 diff
(100 %id)
AI275776 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .k-u 112 to 373 271 to 10       262/271
(96 %)
0 diff
(100 %id)
FN087595 breast carcinoma .k-u 120 to 214 1 to 93       93/93
(100 %)
3 diff
(96.8 %id)
AW087461 colon, moderately differentiated adenocarcinoma .k-u 144 to 373 230 to 1       230/230
(100 %)
3 diff
(98.7 %id)
AW087284 colon, moderately differentiated adenocarcinoma .k-u 172 to 373 201 to 1       201/201
(100 %)
2 diff
(99.1 %id)
FN143785 breast carcinoma .k-u 304 to 372 68 to 1     Submitted on the opposite strand 68/68
(100 %)
1 diff
(98.6 %id)
FN142938 breast carcinoma .l-u 1 to 122 1 to 123   tiling clone,   123/123
(100 %)
4 diff
(96.8 %id)
BU153626 epithelioid carcinoma, Pancreas .l-u 101 to 372 1 to 272 exact tiling clone, AAA   272/272
(100 %)
0 diff
(100 %id)
U86074   Gene MTL5, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i, .j, .k-u, .l-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C