cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AF034182 | .b | 1691 to 1925 | 165 to 401 | 237/402 (58 %) | 8 diff (98.1 %id) | ||||
Z28675 | leg muscle, skeletal muscle | .b | 3133 to 3282 | 1 to 150 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 150/150 (100 %) | 2 diff (98.7 %id) | |
AA249587 | .b | 1736 to 1907 | 1 to 173 | 173/173 (100 %) | 3 diff (98.3 %id) | ||||
AA305490 | colon | .b | 1026 to 1389 | 1 to 364 | 364/364 (100 %) | 4 diff (99.0 %id) | |||
AA314716 | colon | .b | 523 to 711 | 282 to 470 | 189/470 (40 %) | 6 diff (98.8 %id) | |||
AA372628 | colon | .a | 209 to 538 | 1 to 330 | 330/330 (100 %) | 0 diff (100 %id) | |||
AV707089 | adrenal gland | .b | 2484 to 3180 | 1 to 695 | 695/695 (100 %) | 6 diff (99.2 %id) | |||
AI207633 | Liver | .n | 11 to 530 | 1 to 520 | AAA | Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) | 520/520 (100 %) | 0 diff (100 %id) | |
AK093888 | trachea | .f | 1 to 1859 | 2 to 1860 | exact | tiling clone, available from FLJ, | 1860/1860 (100 %) | 3 diff (99.9 %id) | |
AK128251 | thymus | .g-u | 2773 to 6443 | 1 to 3671 | tiling clone, available from FLJ, | 3671/3671 (100 %) | 2 diff (100.0 %id) | ||
AK295060 | brain | .b | 1 to 1715 | 1 to 1715 | exact | tiling clone, | 1715/1715 (100 %) | 2 diff (99.9 %id) | |
AK297295 | brain | .c | 268 to 1740 | 152 to 1625 | tiling clone, | 1474/1625 (90 %) | 11 diff (99.4 %id) | ||
AL833068 | human spinal cord | .i-u | 1 to 6625 | 1 to 6623 | exact | tiling clone, available from DKFZ, AAA | Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) | 6623/6623 (100 %) | 23 diff (99.7 %id) |
AW377687 | colon | .b | 2851 to 3037 | 1 to 188 | 188/188 (100 %) | 1 diff (99.5 %id) | |||
AW605404 | denis_drash | .b | 1012 to 1397 | 1 to 382 | 382/384 (99 %) | 13 diff (96.7 %id) | |||
AW805112 | uterus | .i-u | 5121 to 5293 | 1 to 171 | tiling clone, | 171/174 (98 %) | 6 diff (96.6 %id) | ||
AW856237 | colon | .i-u | 5300 to 5767 | 1 to 465 | 465/475 (97 %) | 10 diff (97.9 %id) | |||
AW864084 | stomach_normal | .b | 1610 to 2181 | 6 to 577 | 572/577 (99 %) | 6 diff (99.0 %id) | |||
AW864154 | stomach_normal | .b | 1591 to 2182 | 10 to 600 | 591/613 (96 %) | 13 diff (97.9 %id) | |||
AW864164 | stomach_normal | .b | 1600 to 2146 | 1 to 545 | 545/546 (99 %) | 12 diff (97.9 %id) | |||
AW896090 | nervous_normal | .k | 440 to 802 | 524 to 162 | tiling clone, | 363/537 (67 %) | 0 diff (100 %id) | ||
AW903305 | nervous_normal | .q | 1956 to 2287 | 10 to 341 | tiling clone, | 332/346 (95 %) | 1 diff (99.8 %id) | ||
AW960441 | .b | 1034 to 1671 | 1 to 636 | 636/636 (100 %) | 8 diff (98.8 %id) | ||||
AW969154 | .q | 4454 to 5128 | 670 to 1 | Submitted on the opposite strand | 670/670 (100 %) | 10 diff (98.6 %id) | |||
AX748353 | .f | 1 to 1859 | 2 to 1860 | exact | 1860/1860 (100 %) | 3 diff (99.9 %id) | |||
BC001526 | Placenta, choriocarcinoma | .a | 1 to 1396 | 1 to 1396 | exact | tiling clone, available from MGC, AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 1396/1396 (100 %) | 1 diff (100.0 %id) |
BE000929 | breast_normal | .g-u | 6918 to 7537 | 634 to 16 | Submitted on the opposite strand | 619/634 (97 %) | 0 diff (100 %id) | ||
BE002675 | breast_normal | .t-u | 1413 to 1924 | 514 to 5 | tiling clone, | Submitted on the opposite strand | 510/514 (99 %) | 0 diff (100 %id) | |
BE010977 | breast_normal | .t-u | 1 to 328 | 328 to 1 | tiling clone, | Submitted on the opposite strand | 328/328 (100 %) | 0 diff (100 %id) | |
BE697796 | colon | .b | 2077 to 2488 | 19 to 427 | 409/427 (95 %) | 6 diff (98.6 %id) | |||
BE697804 | colon | .b | 2073 to 2488 | 1 to 413 | 413/413 (100 %) | 5 diff (98.8 %id) | |||
BE836557 | prostate_normal | .c | 1049 to 1381 | 345 to 13 | 333/345 (96 %) | 0 diff (100 %id) | |||
BE836562 | prostate_normal | .c | 1051 to 1381 | 343 to 13 | 331/343 (96 %) | 0 diff (100 %id) | |||
BE939700 | uterus_tumor | .k | 125 to 447 | 334 to 12 | 323/334 (96 %) | 0 diff (100 %id) | |||
BF091631 | testis_normal | .g-u | 7191 to 7466 | 1 to 274 | 274/332 (82 %) | 12 diff (96.4 %id) | |||
BF155165 | breast | .vb-u | 1 to 440 | 29 to 465 | exact | tiling clone, | 437/486 (89 %) | 5 diff (99.0 %id) | |
BF172685 | blood | .b | 1077 to 1344 | 1 to 271 | 271/271 (100 %) | 5 diff (98.2 %id) | |||
BF333115 | breast | .g-u | 5218 to 5596 | 1 to 375 | 375/375 (100 %) | 7 diff (98.2 %id) | |||
BF366011 | nervous_tumor | .g-u | 1479 to 1826 | 1 to 347 | 347/347 (100 %) | 10 diff (97.2 %id) | |||
BF366012 | nervous_tumor | .g-u | 1546 to 1941 | 1 to 398 | 398/400 (99 %) | 9 diff (97.8 %id) | |||
BF366014 | nervous_tumor | .g-u | 1470 to 1942 | 1 to 476 | 476/487 (97 %) | 5 diff (99.0 %id) | |||
BF366017 | nervous_tumor | .i-u | 5389 to 5775 | 1 to 387 | tiling clone, | 387/387 (100 %) | 10 diff (97.5 %id) | ||
BF366019 | nervous_tumor | .g-u | 1474 to 1826 | 14 to 366 | 353/366 (96 %) | 6 diff (98.4 %id) | |||
BF812760 | colon_ins | .q | 4127 to 4349 | 1 to 219 | 219/219 (100 %) | 8 diff (96.4 %id) | |||
BF838380 | head_neck | .k | 1 to 481 | 15 to 497 | G2V G3R L4H S5E W6L ... | tiling clone, | 483/499 (96 %) | 14 diff (97.2 %id) | |
BF884520 | lung_tumor | .q | 4592 to 4912 | 332 to 14 | Submitted on the opposite strand | 319/332 (96 %) | 0 diff (100 %id) | ||
BF929115 | nervous_tumor | .g-u | 7266 to 7686 | 1 to 421 | 421/425 (99 %) | 16 diff (96.3 %id) | |||
BF955385 | nervous_normal | .i-u | 436 to 905 | 470 to 1 | 470/470 (100 %) | 1 diff (99.8 %id) | |||
BF956321 | nervous_normal | .t-u | 3798 to 4040 | 32 to 273 | 242/273 (88 %) | 6 diff (97.9 %id) | |||
BF956323 | nervous_normal | .t-u | 3901 to 4109 | 343 to 135 | 209/343 (60 %) | 0 diff (100 %id) | |||
BG007627 | placenta_normal | .g-u | 973 to 1410 | 1 to 439 | 439/439 (100 %) | 4 diff (99.1 %id) | |||
BG953430 | colon | .i-u | 5091 to 5283 | 1 to 194 | 194/212 (91 %) | 11 diff (94.9 %id) | |||
BG991535 | head_neck | .ve-u | 1 to 222 | 224 to 2 | exact | tiling clone, | 223/224 (99 %) | 0 diff (100 %id) | |
BI029856 | marrow | .i-u | 3521 to 3950 | 1 to 429 | 429/436 (98 %) | 7 diff (98.4 %id) | |||
BI032746 | nervous_normal | .q | 4669 to 4947 | 1 to 279 | 279/279 (100 %) | 3 diff (99.0 %id) | |||
BI033139 | nervous_normal | .q | 4613 to 4947 | 1 to 332 | 332/332 (100 %) | 9 diff (97.3 %id) | |||
BI034212 | nervous_normal | .q | 4650 to 4841 | 17 to 206 | 190/222 (85 %) | 11 diff (95.1 %id) | |||
BM264417 | Pancreas, Purified pancreatic islet | .b | 2913 to 3408 | 496 to 1 | 496/496 (100 %) | 0 diff (100 %id) | |||
BM271776 | Pancreas, Purified pancreatic islet | .b | 2387 to 2899 | 11 to 524 | 514/524 (98 %) | 6 diff (98.9 %id) | |||
BM353635 | Pancreas, Purified pancreatic islet | .b | 2863 to 3408 | 546 to 1 | 546/546 (100 %) | 0 diff (100 %id) | |||
BM353913 | Pancreas, Purified pancreatic islet | .b | 2386 to 2983 | 10 to 607 | 598/607 (98 %) | 6 diff (99.1 %id) | |||
BM509418 | insulinoma, Pancreas | .g-u | 7168 to 7610 | 445 to 2 | Submitted on the opposite strand | 444/445 (99 %) | 0 diff (100 %id) | ||
DA066244 | cerebellum | .f | 418 to 943 | 43 to 568 | capped | 526/567 (92 %) | 5 diff (99.2 %id) | ||
DB297291 | cerebellum | .f | 1684 to 2141 | 458 to 1 | 458/461 (99 %) | 1 diff (99.8 %id) | |||
DA089808 | cerebellum | .h | 1 to 696 | 2 to 575 | D143R S144R P145R T146M P147A ... | tiling clone, capped | Suspected internal deletion | 574/574 (100 %) | 0 diff (100 %id) |
DA124347 | cerebellum | .t-u | 728 to 1264 | 2 to 539 | tiling clone, capped | 538/538 (100 %) | 2 diff (99.7 %id) | ||
DB300704 | cerebellum | .t-u | 3939 to 4405 | 467 to 1 | 467/467 (100 %) | 17 diff (96.4 %id) | |||
DA131289 | alzheimer cortex | .f | 333 to 865 | 38 to 571 | capped | 534/570 (93 %) | 6 diff (99.0 %id) | ||
DA162975 | amygdala | .a | 120 to 588 | 2 to 470 | capped | 469/589 (79 %) | 6 diff (99.0 %id) | ||
DC324151 | brain | .b | 1 to 485 | 1 to 485 | 485/580 (83 %) | 7 diff (98.8 %id) | |||
DA259617 | caudate nucleus | .a | 77 to 588 | 2 to 513 | capped | 512/577 (88 %) | 7 diff (98.8 %id) | ||
DA361298 | subthalamic nucleus | .u | 1 to 547 | 2 to 548 | exact | tiling clone, capped | 547/547 (100 %) | 1 diff (99.9 %id) | |
BX095130 | melanocyte | .b | 1886 to 2454 | 11 to 580 | tiling clone, | 570/580 (98 %) | 5 diff (99.2 %id) | ||
BX114190 | liver and spleen | .q | 4545 to 5136 | 590 to 1 | Submitted on the opposite strand | 590/590 (100 %) | 4 diff (99.4 %id) | ||
BX119204 | pooled germ cell tumors | .a | 205 to 588 | 1 to 384 | 384/496 (77 %) | 6 diff (98.8 %id) | |||
BX282070 | melanotic melanoma, skin | .b | 466 to 956 | 10 to 501 | 492/501 (98 %) | 6 diff (98.9 %id) | |||
BX647282 | human retina | .q | 1 to 5122 | 1 to 5122 | exact | tiling clone, available from DKFZ, AAA | Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) | 5122/5122 (100 %) | 6 diff (99.9 %id) |
BX647939 | human testis | .g-u | 1 to 7611 | 1 to 7611 | exact | tiling clone, available from DKFZ, AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 7611/7611 (100 %) | 8 diff (99.9 %id) |
C03706 | heart | .b | 2388 to 2802 | 1 to 415 | 415/415 (100 %) | 7 diff (98.4 %id) | |||
CD237302 | Pituitary | .b | 2485 to 3196 | 1 to 711 | 711/711 (100 %) | 9 diff (98.8 %id) | |||
CD636577 | .a | 890 to 1441 | 1 to 552 | 552/552 (100 %) | 10 diff (98.2 %id) | ||||
CD636578 | .a | 896 to 1441 | 548 to 1 | 548/555 (98 %) | 3 diff (99.5 %id) | ||||
CN274644 | embryonic stem cells, DMSO-treated H9 cellline | .a | 127 to 588 | 1 to 462 | 462/660 (70 %) | 6 diff (99.1 %id) | |||
CN290427 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .b | 2415 to 3012 | 1 to 598 | 598/598 (100 %) | 0 diff (100 %id) | |||
CN370693 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .b | 2431 to 3164 | 1 to 735 | 735/735 (100 %) | 2 diff (99.8 %id) | |||
CN370694 | embryonic stem cells, cell lines H1, H7, andH9 | .b | 2983 to 3365 | 1 to 383 | 383/383 (100 %) | 1 diff (99.8 %id) | |||
CR739002 | anaplastic oligodendroglioma, brain | .n | 21 to 488 | 1 to 469 | 469/469 (100 %) | 1 diff (99.8 %id) | |||
CR743213 | Prostate | .b | 2162 to 2628 | 1 to 467 | 467/469 (99 %) | 1 diff (99.8 %id) | |||
BX437573 | thymus | .c | 2288 to 3236 | 951 to 1 | tiling clone, | 951/951 (100 %) | 5 diff (99.5 %id) | ||
BX437574 | thymus | .c | 546 to 1423 | 1 to 878 | tiling clone, | 878/878 (100 %) | 3 diff (99.7 %id) | ||
BX441848 | brain, fetal brain | .b | 2404 to 2920 | 1 to 520 | 520/521 (99 %) | 6 diff (98.9 %id) | |||
BX452101 | brain, fetal brain | .b | 2785 to 3292 | 1 to 514 | 514/635 (80 %) | 31 diff (95.2 %id) | |||
DA454867 | tongue, tumor tissue | .r | 1 to 501 | 2 to 502 | F55S | tiling clone, capped | 501/501 (100 %) | 2 diff (99.7 %id) | |
CV027635 | mixed | .a | 174 to 804 | 1 to 631 | 631/631 (100 %) | 1 diff (99.9 %id) | |||
CV384246 | nervous_tumor | .vc-u | 1 to 422 | 1 to 428 | A2P L4V A12* | tiling clone, | 428/428 (100 %) | 30 diff (93.0 %id) | |
BX486517 | .b | 2497 to 3126 | 1 to 630 | 630/630 (100 %) | 3 diff (99.6 %id) | ||||
BX493432 | .b | 3610 to 4174 | 1 to 566 | tiling clone, | 566/566 (100 %) | 2 diff (99.7 %id) | |||
BX642669 | .q | 913 to 1531 | 1 to 619 | tiling clone, | 619/619 (100 %) | 1 diff (99.9 %id) | |||
DW428745 | Liver | .e | 977 to 1183 | 17 to 222 | tiling clone, AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 206/222 (92 %) | 6 diff (97.3 %id) | |
DW431283 | Liver | .g-u | 5758 to 6010 | 17 to 269 | 253/269 (94 %) | 6 diff (97.8 %id) | |||
DW431598 | Liver | .b | 439 to 697 | 10 to 268 | 259/268 (96 %) | 7 diff (97.4 %id) | |||
DW452791 | Liver | .e | 977 to 1151 | 17 to 190 | 174/190 (91 %) | 6 diff (96.9 %id) | |||
EL737187 | mixed | .f | 335 to 789 | 1 to 455 | 455/621 (73 %) | 0 diff (100 %id) | |||
DC350824 | brain | .b | 365 to 788 | 152 to 575 | 424/575 (73 %) | 6 diff (99.0 %id) | |||
FN081272 | breast carcinoma | .b | 2749 to 2818 | 1 to 70 | 70/71 (98 %) | 1 diff (98.6 %id) | |||
FN088298 | breast carcinoma | .b | 2680 to 2754 | 76 to 1 | Submitted on the opposite strand | 76/77 (98 %) | 1 diff (98.8 %id) | ||
FN105568 | breast carcinoma | .b | 2995 to 3074 | 80 to 3 | Submitted on the opposite strand | 78/94 (82 %) | 0 diff (100 %id) | ||
FN112149 | breast carcinoma | .b | 1817 to 1934 | 125 to 12 | Submitted on the opposite strand | 114/125 (91 %) | 0 diff (100 %id) | ||
FN121172 | breast carcinoma | .b | 2957 to 3068 | 109 to 1 | Submitted on the opposite strand | 109/109 (100 %) | 5 diff (95.5 %id) | ||
FN130904 | breast carcinoma | .vf-u | 1 to 126 | 1 to 129 | A18S L19F F20V R21* | tiling clone, | 129/129 (100 %) | 3 diff (97.7 %id) | |
FN147378 | breast carcinoma | .b | 2865 to 2926 | 61 to 1 | Submitted on the opposite strand | 61/61 (100 %) | 1 diff (98.4 %id) | ||
FN149643 | breast carcinoma | .b | 3024 to 3104 | 82 to 1 | Submitted on the opposite strand | 82/83 (98 %) | 1 diff (98.8 %id) | ||
GD135974 | .q | 5083 to 5143 | 1 to 61 | 61/63 (96 %) | 3 diff (95.3 %id) | ||||
GD136674 | .b | 2933 to 3122 | 190 to 1 | Submitted on the opposite strand | 190/191 (99 %) | 3 diff (98.5 %id) | |||
GD136970 | .b | 2933 to 3122 | 190 to 1 | Submitted on the opposite strand | 190/191 (99 %) | 3 diff (98.5 %id) | |||
GD138449 | .b | 2936 to 3118 | 188 to 6 | AAA | Submitted on the opposite strand | 183/188 (97 %) | 0 diff (100 %id) | ||
GD146334 | .b | 2940 to 3115 | 181 to 6 | AAA | Submitted on the opposite strand | 176/185 (95 %) | 0 diff (100 %id) | ||
GD146345 | .b | 2936 to 3112 | 186 to 10 | Submitted on the opposite strand | 177/186 (95 %) | 0 diff (100 %id) | |||
GD148177 | .i-u | 6175 to 6333 | 1 to 159 | 159/163 (97 %) | 5 diff (97.0 %id) | ||||
GD153040 | .b | 2602 to 2761 | 163 to 1 | AAA | Submitted on the opposite strand | 163/165 (98 %) | 6 diff (96.4 %id) | ||
GD153044 | .b | 2602 to 2761 | 160 to 1 | Submitted on the opposite strand | 160/167 (95 %) | 2 diff (98.9 %id) | |||
GD158516 | .q | 5083 to 5143 | 1 to 61 | 61/64 (95 %) | 2 diff (96.9 %id) | ||||
AV682762 | hepatocellular carcinoma | .b | 2523 to 3180 | 1 to 658 | 658/658 (100 %) | 1 diff (99.9 %id) | |||
BQ638186 | eye, retina | .g-u | 5697 to 6341 | 1 to 645 | tiling clone, | 645/645 (100 %) | 0 diff (100 %id) | ||
DA572432 | whole embryo, mainly body | .f | 432 to 1274 | 2 to 840 | capped | 839/848 (98 %) | 14 diff (98.4 %id) | ||
DB359450 | whole embryo, mainly body | .f | 1602 to 2141 | 542 to 1 | tiling clone, | 542/543 (99 %) | 12 diff (97.8 %id) | ||
BP422325 | small intestine | .b | 2902 to 3423 | 522 to 1 | 522/522 (100 %) | 1 diff (99.9 %id) | |||
DA583392 | lung | .g-u | 3503 to 4048 | 2 to 547 | capped | 546/546 (100 %) | 2 diff (99.7 %id) | ||
DB319298 | lung | .g-u | 5893 to 6443 | 551 to 1 | 551/551 (100 %) | 0 diff (100 %id) | |||
AV728112 | hypothalamus | .c | 1050 to 1780 | 1 to 730 | 730/730 (100 %) | 26 diff (96.5 %id) | |||
H90188 | liver and spleen | .q | 4750 to 5135 | 392 to 2 | Submitted on the opposite strand | 391/399 (97 %) | 0 diff (100 %id) | ||
H90847 | liver and spleen | .q | 4466 to 4822 | 1 to 364 | Submitted on the opposite strand | 364/367 (99 %) | 18 diff (95.1 %id) | ||
N52994 | liver and spleen | .b | 2731 to 3177 | 447 to 1 | 447/447 (100 %) | 3 diff (99.4 %id) | |||
H96502 | melanocyte | .b | 2934 to 3416 | 486 to 1 | 486/488 (99 %) | 7 diff (98.6 %id) | |||
H96971 | melanocyte | .b | 1492 to 1928 | 438 to 1 | 438/438 (100 %) | 3 diff (99.4 %id) | |||
N20665 | melanocyte | .c | 1452 to 1777 | 328 to 1 | fully sequenced, | 328/328 (100 %) | 2 diff (99.4 %id) | ||
N29042 | melanocyte | .c | 1132 to 1482 | 1 to 359 | fully sequenced, | 359/359 (100 %) | 2 diff (99.5 %id) | ||
N66818 | melanocyte | .b | 2967 to 3399 | 443 to 10 | 434/443 (97 %) | 0 diff (100 %id) | |||
W56402 | melanocyte | .b | 1913 to 2508 | 1 to 597 | 597/597 (100 %) | 13 diff (97.9 %id) | |||
AA063071 | pineal gland | .g-u | 7525 to 7730 | 1 to 206 | tiling clone, | Submitted on the opposite strand | 206/207 (99 %) | 1 diff (99.6 %id) | |
AA195719 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 3018 to 3408 | 392 to 2 | 391/392 (99 %) | 0 diff (100 %id) | |||
AA195755 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 1916 to 2330 | 1 to 416 | 416/416 (100 %) | 1 diff (99.8 %id) | |||
AA227975 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 1895 to 2240 | 346 to 1 | 346/346 (100 %) | 2 diff (99.5 %id) | |||
AA228139 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 611 to 1029 | 1 to 404 | 407/404 (100 %) | 26 diff (93.6 %id) | |||
AA235112 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .c | 1525 to 1778 | 254 to 1 | 254/254 (100 %) | 1 diff (99.7 %id) | |||
AA235221 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .c | 1132 to 1523 | 1 to 391 | 391/391 (100 %) | 5 diff (98.8 %id) | |||
AA425281 | .b | 3314 to 3760 | 447 to 1 | 447/447 (100 %) | 0 diff (100 %id) | ||||
AA425483 | .b | 2850 to 3304 | 1 to 454 | 454/454 (100 %) | 2 diff (99.6 %id) | ||||
AA428576 | .q | 4762 to 5132 | 371 to 1 | 371/371 (100 %) | 3 diff (99.2 %id) | ||||
AA429532 | .q | 4188 to 4639 | 1 to 452 | tiling clone, | 452/452 (100 %) | 2 diff (99.6 %id) | |||
AA521410 | germinal center B cell | .q | 4552 to 5138 | 582 to 1 | 582/582 (100 %) | 10 diff (98.3 %id) | |||
AA521327 | germinal center B cell | .q | 4632 to 5138 | 508 to 1 | 508/508 (100 %) | 9 diff (98.3 %id) | |||
AA468538 | colon | .b | 2993 to 3414 | 421 to 1 | 421/421 (100 %) | 1 diff (99.8 %id) | |||
AA774921 | schizophrenic brain S-11 frontal lobe | .t-u | 3769 to 3912 | 1 to 144 | tiling clone, | Submitted on the opposite strand | 144/144 (100 %) | 1 diff (99.4 %id) | |
AA552985 | Schwannoma tumor | .e | 475 to 1185 | 710 to 1 | tiling clone, | 710/710 (100 %) | 7 diff (99.1 %id) | ||
AA807495 | germinal center B cell | .b | 2969 to 3426 | 458 to 1 | 458/458 (100 %) | 7 diff (98.5 %id) | |||
AA738321 | pooled germ cell tumors | .b | 2507 to 2712 | 245 to 40 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 206/206 (100 %) | 1 diff (99.6 %id) | |
AA743713 | germinal center B cell | .b | 2736 to 3169 | 441 to 9 | 433/441 (98 %) | 0 diff (100 %id) | |||
AA814267 | germinal center B cell | .b | 2987 to 3426 | 438 to 1 | 438/438 (100 %) | 5 diff (98.9 %id) | |||
AA765939 | germinal center B cell | .b | 946 to 1347 | 417 to 16 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 402/412 (97 %) | 3 diff (99.3 %id) | |
AA724751 | pooled | .b | 3056 to 3413 | 358 to 1 | 358/358 (100 %) | 7 diff (98.1 %id) | |||
AA837252 | germinal center B cell | .b | 3058 to 3422 | 362 to 1 | 362/362 (100 %) | 2 diff (99.5 %id) | |||
AA836389 | germinal center B cell | .b | 936 to 1350 | 432 to 19 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 414/415 (99 %) | 5 diff (98.8 %id) | |
AA843302 | parathyroid gland, parathyroid tumor | .b | 3117 to 3421 | 306 to 1 | 306/306 (100 %) | 1 diff (99.7 %id) | |||
AI184868 | pooled | .b | 2262 to 2686 | 425 to 1 | 425/425 (100 %) | 0 diff (100 %id) | |||
AA960952 | carcinoid, lung | .b | 3027 to 3333 | 1 to 308 | Submitted on the opposite strand | 308/308 (100 %) | 9 diff (97.1 %id) | ||
AA948284 | pooled germ cell tumors | .b | 2287 to 2712 | 424 to 1 | 424/424 (100 %) | 1 diff (99.8 %id) | |||
AI023422 | liver and spleen | .t-u | 1399 to 1850 | 463 to 12 | AAA | 452/452 (100 %) | 0 diff (100 %id) | ||
AI049958 | .b | 2890 to 3413 | 539 to 16 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 524/524 (100 %) | 1 diff (99.9 %id) | ||
AI139567 | placenta | .b | 2261 to 2724 | 470 to 8 | 463/470 (98 %) | 0 diff (100 %id) | |||
AI215489 | pooled | .b | 2773 to 3168 | 396 to 1 | 396/396 (100 %) | 1 diff (99.8 %id) | |||
AI269890 | Kidney | .b | 2912 to 3408 | 501 to 4 | 498/501 (99 %) | 0 diff (100 %id) | |||
AI300846 | 2 pooled tumors (clear cell type), Kidney | .b | 1049 to 1350 | 315 to 14 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 302/302 (100 %) | 0 diff (100 %id) | |
AI202531 | Prostate | .b | 2272 to 2678 | 406 to 1 | 406/406 (100 %) | 4 diff (99.1 %id) | |||
AI367974 | moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus | .b | 3056 to 3408 | 355 to 3 | 353/355 (99 %) | 5 diff (98.6 %id) | |||
AI369752 | anaplastic oligodendroglioma, brain | .g-u | 7222 to 7612 | 391 to 1 | 391/391 (100 %) | 1 diff (99.8 %id) | |||
AI493004 | Kidney | .b | 2934 to 3408 | 475 to 1 | 475/475 (100 %) | 0 diff (100 %id) | |||
AI309570 | 2 pooled tumors (clear cell type), Kidney | .b | 1059 to 1351 | 299 to 7 | 293/299 (97 %) | 0 diff (100 %id) | |||
AI803606 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .n | 426 to 933 | 508 to 1 | tiling clone, | 508/508 (100 %) | 0 diff (100 %id) | ||
AI420567 | Prostate | .b | 2343 to 2678 | 335 to 1 | 335/335 (100 %) | 5 diff (98.6 %id) | |||
AI468178 | Prostate | .b | 2502 to 2678 | 178 to 1 | 178/178 (100 %) | 1 diff (99.5 %id) | |||
AI399898 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 1508 to 1927 | 421 to 1 | 421/421 (100 %) | 3 diff (99.3 %id) | |||
AI473254 | Kidney | .n | 381 to 523 | 151 to 9 | 143/151 (94 %) | 0 diff (100 %id) | |||
AI439153 | Kidney | .b | 2896 to 3413 | 519 to 1 | 519/519 (100 %) | 2 diff (99.7 %id) | |||
AI446696 | poorly differentiated adenocarcinoma withsignet ring cell features, stomach | .a | 906 to 1373 | 23 to 490 | Submitted on the opposite strand | 468/490 (95 %) | 10 diff (98.0 %id) | ||
AI802948 | pooled | .a | 766 to 1400 | 639 to 4 | 636/643 (98 %) | 15 diff (97.7 %id) | |||
AI470018 | pooled | .b | 2673 to 3153 | 1 to 481 | Submitted on the opposite strand | 481/481 (100 %) | 1 diff (99.8 %id) | ||
AI498424 | Kidney | .b | 2640 to 2925 | 286 to 1 | 286/286 (100 %) | 0 diff (100 %id) | |||
AI498100 | anaplastic oligodendroglioma, brain | .n | 99 to 530 | 461 to 29 | AAA | Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) | 433/497 (87 %) | 18 diff (96.4 %id) | |
AI572440 | anaplastic oligodendroglioma, brain | .g-u | 7314 to 7612 | 307 to 9 | 299/307 (97 %) | 0 diff (100 %id) | |||
AI632140 | pooled germ cell tumors | .b | 3152 to 3605 | 454 to 1 | 454/454 (100 %) | 0 diff (100 %id) | |||
AI638003 | pooled germ cell tumors | .b | 2911 to 3413 | 503 to 1 | 503/503 (100 %) | 1 diff (99.9 %id) | |||
AI686063 | Prostate | .n | 4 to 524 | 529 to 9 | 521/529 (98 %) | 1 diff (99.9 %id) | |||
AI802169 | carcinoid, lung | .b | 2988 to 3389 | 1 to 402 | Submitted on the opposite strand | 402/402 (100 %) | 1 diff (99.8 %id) | ||
AI802173 | carcinoid, lung | .b | 2599 to 3071 | 1 to 473 | Submitted on the opposite strand | 473/473 (100 %) | 1 diff (99.8 %id) | ||
AI758917 | Kidney | .s | 1 to 186 | 186 to 1 | P61T | tiling clone, | 186/186 (100 %) | 2 diff (99.0 %id) | |
AI872274 | ovary, tumor, 5 pooled (see description) | .b | 2513 to 2926 | 417 to 4 | 414/417 (99 %) | 0 diff (100 %id) | |||
AI913722 | Kidney | .b | 2948 to 3413 | 466 to 1 | 466/466 (100 %) | 0 diff (100 %id) | |||
AI640458 | Kidney | .b | 3061 to 3413 | 353 to 1 | 353/353 (100 %) | 0 diff (100 %id) | |||
AI653310 | pooled germ cell tumors | .b | 2235 to 2712 | 478 to 1 | 478/478 (100 %) | 3 diff (99.4 %id) | |||
AI650679 | pooled germ cell tumors | .g-u | 6851 to 7333 | 483 to 1 | 483/483 (100 %) | 2 diff (99.6 %id) | |||
AI678168 | Prostate | .b | 3021 to 3413 | 393 to 1 | 393/393 (100 %) | 4 diff (99.0 %id) | |||
AI674728 | pooled | .b | 2070 to 2531 | 469 to 8 | 462/469 (98 %) | 0 diff (100 %id) | |||
AI694538 | carcinoid, lung | .g-u | 6544 to 7078 | 21 to 552 | Submitted on the opposite strand | 532/552 (96 %) | 6 diff (99.0 %id) | ||
AI693351 | carcinoid, lung | .b | 2837 to 3293 | 1 to 457 | Submitted on the opposite strand | 457/457 (100 %) | 0 diff (100 %id) | ||
AI697764 | carcinoid, lung | .b | 2979 to 3382 | 1 to 404 | Submitted on the opposite strand | 404/404 (100 %) | 4 diff (99.1 %id) | ||
AI694944 | carcinoid, lung | .b | 2489 to 2966 | 488 to 11 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 478/478 (100 %) | 0 diff (100 %id) | |
AI695483 | colon | .b | 2380 to 2713 | 342 to 5 | 338/342 (98 %) | 0 diff (100 %id) | |||
AI798817 | pooled | .g-u | 7308 to 7612 | 313 to 9 | 305/313 (97 %) | 0 diff (100 %id) | |||
AI741465 | pooled | .b | 2941 to 3411 | 491 to 21 | AAA | Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) | 471/471 (100 %) | 1 diff (99.8 %id) | |
AI761626 | pooled | .b | 2850 to 3420 | 572 to 1 | 572/572 (100 %) | 9 diff (98.5 %id) | |||
AI808923 | B-cell, chronic lymphotic leukemia | .b | 3019 to 3397 | 391 to 13 | 379/391 (96 %) | 0 diff (100 %id) | |||
AI769454 | 2 pooled tumors (clear cell type), Kidney | .b | 2781 to 3417 | 637 to 1 | 637/637 (100 %) | 1 diff (99.9 %id) | |||
AI862535 | 2 pooled tumors (clear cell type), Kidney | .b | 2233 to 2713 | 484 to 4 | 481/484 (99 %) | 0 diff (100 %id) | |||
AI819588 | lymph node, lymphoma, follicular mixed small and largecell | .b | 2654 to 2855 | 11 to 210 | Submitted on the opposite strand | 200/210 (95 %) | 6 diff (97.2 %id) | ||
AI922376 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .b | 2893 to 3287 | 420 to 24 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 397/397 (100 %) | 18 diff (95.5 %id) | |
AI933313 | anaplastic oligodendroglioma, brain | .n | 115 to 537 | 424 to 1 | 424/424 (100 %) | 2 diff (99.6 %id) | |||
AI937290 | anaplastic oligodendroglioma, brain | .b | 3019 to 3414 | 398 to 1 | 398/398 (100 %) | 15 diff (96.3 %id) | |||
AI937363 | anaplastic oligodendroglioma, brain | .b | 2946 to 3414 | 469 to 1 | 469/469 (100 %) | 3 diff (99.4 %id) | |||
AI970795 | normal prostate, Prostate | .b | 2223 to 2678 | 456 to 1 | 456/456 (100 %) | 2 diff (99.6 %id) | |||
AI971282 | Prostate | .n | 1 to 521 | 536 to 9 | I92N D93* | tiling clone, AAA | Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) | 525/525 (100 %) | 4 diff (99.3 %id) |
AI972510 | Prostate | .b | 2198 to 2678 | 481 to 1 | 481/481 (100 %) | 2 diff (99.6 %id) | |||
AI972781 | Prostate | .b | 2232 to 2678 | 447 to 1 | 447/447 (100 %) | 0 diff (100 %id) | |||
AI992362 | pooled germ cell tumors | .b | 2235 to 2712 | 474 to 1 | 474/477 (99 %) | 10 diff (98.0 %id) | |||
AW054806 | anaplastic oligodendroglioma, brain | .a | 190 to 486 | 297 to 1 | 297/298 (99 %) | 8 diff (97.4 %id) | |||
AW027784 | Kidney | .n | 82 to 535 | 454 to 1 | 454/454 (100 %) | 0 diff (100 %id) | |||
AW044428 | pooled | .b | 2268 to 2718 | 455 to 5 | tiling clone, | 451/455 (99 %) | 0 diff (100 %id) | ||
AW078936 | 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney | .b | 3077 to 3413 | 351 to 15 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 337/339 (99 %) | 1 diff (99.8 %id) | |
AW242504 | Kidney | .b | 2825 to 3232 | 408 to 1 | 408/408 (100 %) | 6 diff (98.6 %id) | |||
AW242693 | Kidney | .b | 2884 to 3399 | 524 to 7 | 518/524 (98 %) | 0 diff (100 %id) | |||
AW134658 | .b | 3017 to 3413 | 414 to 18 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 397/397 (100 %) | 0 diff (100 %id) | ||
AW137290 | .b | 2781 to 3168 | 405 to 18 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 388/388 (100 %) | 1 diff (99.8 %id) | ||
AW204863 | .b | 3025 to 3422 | 398 to 1 | 398/398 (100 %) | 0 diff (100 %id) | ||||
AW291624 | .b | 2254 to 2682 | 443 to 15 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 429/429 (100 %) | 0 diff (100 %id) | ||
AW292246 | .b | 2462 to 2712 | 268 to 18 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 251/251 (100 %) | 3 diff (98.9 %id) | ||
AW270384 | endometrioid ovarian metastasis, ovary | .q | 4479 to 4888 | 9 to 418 | Submitted on the opposite strand | 410/418 (98 %) | 6 diff (98.6 %id) | ||
AW250196 | lung, small cell carcinoma | .g-u | 7080 to 7611 | 542 to 11 | tiling clone, AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 532/532 (100 %) | 0 diff (100 %id) | |
AW470320 | carcinoid, lung | .b | 2699 to 3169 | 471 to 1 | 471/471 (100 %) | 1 diff (99.8 %id) | |||
AW593486 | pooled germ cell tumors | .b | 2232 to 2712 | 481 to 1 | 481/481 (100 %) | 1 diff (99.8 %id) | |||
AW590496 | pooled germ cell tumors | .b | 2390 to 2708 | 323 to 5 | 319/323 (98 %) | 0 diff (100 %id) | |||
AW769700 | 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney | .b | 3076 to 3425 | 355 to 1 | 355/355 (100 %) | 8 diff (97.8 %id) | |||
AW405813. matches multiple genes | lymph | .b | 2098 to 2367 | 8 to 277 | also hits gene IFITM1 | 270/277 (97 %) | 6 diff (97.9 %id) | ||
BF197320 | Kidney | .b | 3132 to 3408 | 277 to 1 | 277/277 (100 %) | 0 diff (100 %id) | |||
BE219279 | carcinoid, lung | .b | 2655 to 3169 | 515 to 1 | 515/519 (99 %) | 1 diff (99.9 %id) | |||
BE219853 | carcinoid, lung | .b | 2717 to 3169 | 453 to 1 | 453/453 (100 %) | 2 diff (99.6 %id) | |||
BE220026 | carcinoid, lung | .b | 2616 to 3169 | 553 to 1 | 553/553 (100 %) | 2 diff (99.7 %id) | |||
BE220408 | carcinoid, lung | .b | 2410 to 2713 | 304 to 1 | 304/304 (100 %) | 0 diff (100 %id) | |||
BE327252 | carcinoid, lung | .b | 944 to 1211 | 1 to 269 | Submitted on the opposite strand | 269/269 (100 %) | 6 diff (97.8 %id) | ||
BE467574 | carcinoid, lung | .b | 2949 to 3388 | 1 to 440 | Submitted on the opposite strand | 440/440 (100 %) | 3 diff (99.4 %id) | ||
CB046649 | 2 pooled tumors (clear cell type), Kidney | .c | 2315 to 2760 | 506 to 61 | tiling clone, AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 446/453 (98 %) | 6 diff (98.7 %id) | |
CB046650 | 2 pooled tumors (clear cell type), Kidney | .c | 943 to 1201 | 17 to 275 | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 259/275 (94 %) | 6 diff (97.9 %id) | ||
BF589094 | pooled | .b | 2371 to 2713 | 349 to 7 | 343/349 (98 %) | 0 diff (100 %id) | |||
BF435123 | pooled | .b | 2185 to 2685 | 501 to 1 | 501/501 (100 %) | 0 diff (100 %id) | |||
BF439690 | pooled | .b | 2719 to 3280 | 566 to 5 | 562/566 (99 %) | 0 diff (100 %id) | |||
BE670921 | carcinoid, lung | .b | 2294 to 2713 | 423 to 4 | 420/423 (99 %) | 0 diff (100 %id) | |||
BE646217 | Prostate | .b | 2221 to 2678 | 458 to 1 | 458/458 (100 %) | 0 diff (100 %id) | |||
BE674916 | B-cell, chronic lymphotic leukemia | .q | 4662 to 5130 | 469 to 1 | 469/469 (100 %) | 1 diff (99.8 %id) | |||
BF002773 | Prostate | .b | 2297 to 2678 | 382 to 1 | 382/382 (100 %) | 0 diff (100 %id) | |||
BF448272 | carcinoid, lung | .b | 2668 to 3186 | 1 to 519 | Submitted on the opposite strand | 519/519 (100 %) | 1 diff (99.9 %id) | ||
BG149533 | carcinoid, lung | .a | 222 to 486 | 265 to 1 | 265/265 (100 %) | 1 diff (99.7 %id) | |||
BF055409 | pooled | .b | 2940 to 3419 | 480 to 1 | 480/480 (100 %) | 6 diff (98.8 %id) | |||
BE278791 | choriocarcinoma, placenta | .a | 21 to 485 | 1 to 469 | 469/699 (67 %) | 7 diff (99.0 %id) | |||
BF196671 | brain, glioblastoma (pooled) | .b | 2934 to 3413 | 480 to 1 | 480/480 (100 %) | 0 diff (100 %id) | |||
BF195264 | carcinoid, lung | .b | 2577 to 2966 | 390 to 1 | 390/390 (100 %) | 2 diff (99.5 %id) | |||
BF445988 | breast, invasive ductal carcinoma, 3 pooled samples | .b | 2940 to 3416 | 478 to 1 | 478/478 (100 %) | 3 diff (99.4 %id) | |||
BF446124 | Prostate | .b | 2296 to 2678 | 383 to 1 | 383/383 (100 %) | 0 diff (100 %id) | |||
BF446472 | carcinoid, lung | .b | 2980 to 3388 | 1 to 409 | Submitted on the opposite strand | 409/409 (100 %) | 4 diff (99.1 %id) | ||
BE872236 | adenocarcinoma, colon | .b | 2393 to 2923 | 1 to 532 | 532/532 (100 %) | 9 diff (98.4 %id) | |||
BE778519 | eye, retinoblastoma | .b | 632 to 1357 | 1 to 723 | 723/743 (97 %) | 11 diff (98.6 %id) | |||
BE891200 | melanotic melanoma, skin | .b | 2381 to 3059 | 3 to 680 | 678/690 (98 %) | 6 diff (99.2 %id) | |||
BC017560 | Skin, melanotic melanoma. | .f | 333 to 1859 | 104 to 1630 | tiling clone, available from MGC, AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 1527/1630 (93 %) | 6 diff (99.7 %id) | |
BE894256 | melanotic melanoma, skin | .f | 565 to 869 | 378 to 685 | available from MGC, | 308/808 (38 %) | 16 diff (98.1 %id) | ||
BE796433 | lung, small cell carcinoma | .g-u | 2164 to 2934 | 1 to 763 | 763/944 (80 %) | 23 diff (97.6 %id) | |||
BF029215 | bladder, carcinoma, cell line | .n | 121 to 523 | 1 to 402 | AAA | Possibly primed on the genome, locally A rich (18/21 A in genome downstream of last aligned base) | 402/402 (100 %) | 3 diff (99.3 %id) | |
BF345044 | brain, glioblastoma with EGFR amplification | .b | 2388 to 3032 | 1 to 642 | 642/642 (100 %) | 11 diff (98.3 %id) | |||
BF676261 | Prostate | .q | 3952 to 4456 | 1 to 512 | 512/871 (58 %) | 17 diff (98.1 %id) | |||
BF674723 | Prostate | .i-u | 1772 to 2402 | 1 to 639 | tiling clone, | 639/641 (99 %) | 30 diff (95.4 %id) | ||
BG223546 | moderate to poorly differentiated invasivecarcinoma, tongue | .a | 176 to 421 | 1 to 246 | 246/247 (99 %) | 2 diff (99.2 %id) | |||
BF797163 | lymph, lymphoma, cell line | .b | 2389 to 3084 | 1 to 705 | 705/965 (73 %) | 14 diff (98.6 %id) | |||
BG251844 | adenocarcinoma, cell line, Liver | .b | 2389 to 3105 | 12 to 719 | 708/722 (98 %) | 15 diff (98.0 %id) | |||
BG255522 | adenocarcinoma, cell line, Prostate | .b | 1780 to 2511 | 1 to 727 | 727/823 (88 %) | 14 diff (98.3 %id) | |||
BG261391 | bladder, transitional cell papilloma, cell line | .b | 2385 to 3176 | 1 to 785 | 785/785 (100 %) | 13 diff (98.4 %id) | |||
BI850917 | bladder, transitional cell papilloma, cell line | .b | 2385 to 3062 | 1 to 678 | 678/678 (100 %) | 4 diff (99.5 %id) | |||
BG282244 | melanotic melanoma, skin | .a | 101 to 485 | 1 to 384 | 384/911 (42 %) | 4 diff (99.6 %id) | |||
BG482956 | lung | .b | 2851 to 3033 | 1 to 187 | 187/223 (83 %) | 12 diff (94.7 %id) | |||
BG504030 | embryonal carcinoma, testis | .b | 2398 to 3132 | 1 to 727 | 727/768 (94 %) | 28 diff (96.4 %id) | |||
BG500195 | adenocarcinoma, Prostate | .b | 2705 to 3430 | 1 to 722 | 722/760 (95 %) | 32 diff (95.8 %id) | |||
BG537337 | lung | .e | 474 to 1080 | 1 to 603 | 603/604 (99 %) | 31 diff (94.9 %id) | |||
BG779658 | adenocarcinoma, Prostate | .b | 2237 to 2932 | 1 to 696 | 696/696 (100 %) | 7 diff (99.0 %id) | |||
BG745477 | Spleen | .t-u | 3011 to 3651 | 1 to 646 | tiling clone, fully sequenced, | 646/646 (100 %) | 9 diff (98.7 %id) | ||
BG745877 | Spleen | .t-u | 3621 to 4359 | 747 to 1 | tiling clone, fully sequenced, | 747/747 (100 %) | 15 diff (98.0 %id) | ||
BG912626 | anaplastic oligodendroglioma with 1p/19qloss, brain | .t-u | 1298 to 2105 | 1 to 807 | tiling clone, | 807/828 (97 %) | 31 diff (96.3 %id) | ||
BI223224 | cervical carcinoma cell line, cervix | .b | 2392 to 3170 | 1 to 805 | 805/817 (98 %) | 69 diff (91.6 %id) | |||
BM014815 | breast, mammary adenocarcinoma, cell line | .b | 615 to 966 | 1 to 353 | 353/356 (99 %) | 2 diff (99.5 %id) | |||
BQ270569 | insulinoma, Pancreas | .n | 7 to 541 | 538 to 2 | tiling clone, | 537/538 (99 %) | 1 diff (99.9 %id) | ||
BQ286271 | Pancreas, Purified pancreatic islet | .b | 2383 to 3026 | 6 to 648 | 643/648 (99 %) | 6 diff (99.1 %id) | |||
BQ416593 | Pancreas, Purified pancreatic islet | .b | 2924 to 3408 | 496 to 12 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) | 485/485 (100 %) | 0 diff (100 %id) | |
BQ416897 | Pancreas, Purified pancreatic islet | .b | 2386 to 2950 | 16 to 580 | fully sequenced, | Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) | 565/580 (97 %) | 6 diff (99.0 %id) | |
BQ439249 | embryonal carcinoma, cell line, testis | .b | 3088 to 4172 | 12 to 1099 | tiling clone, | 1088/1101 (98 %) | 40 diff (96.4 %id) | ||
BU077970 | Pancreas, Purified pancreatic islet | .b | 2826 to 3398 | 584 to 11 | fully sequenced, | 574/584 (98 %) | 1 diff (99.9 %id) | ||
BU078217 | Pancreas, Purified pancreatic islet | .b | 2380 to 2856 | 3 to 480 | fully sequenced, | 478/480 (99 %) | 6 diff (98.8 %id) | ||
BU074622 | Pancreas, Purified pancreatic islet | .b | 2913 to 3408 | 497 to 3 | fully sequenced, | 495/497 (99 %) | 6 diff (98.8 %id) | ||
BU074911 | Pancreas, Purified pancreatic islet | .b | 2455 to 2943 | 1 to 489 | fully sequenced, | 489/489 (100 %) | 0 diff (100 %id) | ||
BQ432759 | testis | .b | 2588 to 3265 | 1 to 684 | 684/778 (87 %) | 14 diff (98.3 %id) | |||
BU786947 | insulinoma, Pancreas | .b | 933 to 1340 | 1 to 408 | Submitted on the opposite strand | 408/408 (100 %) | 0 diff (100 %id) | ||
BU781866 | insulinoma, Pancreas | .b | 2796 to 3422 | 634 to 8 | Submitted on the opposite strand | 627/634 (98 %) | 0 diff (100 %id) | ||
BU782780 | insulinoma, Pancreas | .b | 933 to 1582 | 1 to 651 | Submitted on the opposite strand | 651/651 (100 %) | 1 diff (99.9 %id) | ||
BU784022 | insulinoma, Pancreas | .g-u | 7023 to 7610 | 590 to 2 | Submitted on the opposite strand | 589/590 (99 %) | 0 diff (100 %id) | ||
BQ424010 | eye, retinoblastoma | .b | 2386 to 2925 | 1 to 540 | 540/766 (70 %) | 8 diff (99.0 %id) | |||
BQ431788 | eye, retinoblastoma | .d | 1 to 881 | 1 to 883 | exact | tiling clone, | 883/884 (99 %) | 10 diff (98.9 %id) | |
BQ427484 | melanotic melanoma, skin | .b | 466 to 1265 | 8 to 809 | 802/862 (93 %) | 8 diff (99.1 %id) | |||
BQ708720 | Spleen | .t-u | 40 to 960 | 1 to 926 | T62R L63* | tiling clone, | 926/927 (99 %) | 19 diff (98.0 %id) | |
BQ883933 | Spleen | .t-u | 40 to 931 | 1 to 897 | G53R N67K L68F F69V Y70L ... | 897/911 (98 %) | 9 diff (99.1 %id) | ||
BQ929543 | leiomyosarcoma, uterus | .b | 2386 to 3275 | 1 to 896 | 896/900 (99 %) | 21 diff (97.7 %id) | |||
BQ951490 | leiomyosarcoma, uterus | .f | 599 to 1510 | 1 to 917 | 917/922 (99 %) | 16 diff (98.3 %id) | |||
CA943839 | Pancreas, Purified pancreatic islet | .b | 3327 to 3408 | 82 to 1 | 82/82 (100 %) | 0 diff (100 %id) | |||
CA950034 | Pancreas, Purified pancreatic islet | .b | 2386 to 2992 | 11 to 617 | 607/617 (98 %) | 6 diff (99.1 %id) | |||
BU852870 | testis | .b | 2644 to 3409 | 1 to 777 | tiling clone, | 777/786 (98 %) | 22 diff (97.3 %id) | ||
BU857812 | adenocarcinoma, cell line, breast | .c | 1 to 770 | 1 to 772 | tiling clone, | 772/945 (81 %) | 8 diff (99.2 %id) | ||
BU956254 | adenocarcinoma, cell line, breast | .u | 317 to 939 | 127 to 753 | exact | tiling clone, | 627/1025 (61 %) | 17 diff (98.4 %id) | |
BU956366 | adenocarcinoma, cell line, breast | .n | 5 to 532 | 1 to 528 | 528/536 (98 %) | 1 diff (99.9 %id) | |||
BU957799 | mixed (pool of 40 RNAs) | .b | 3115 to 3449 | 1 to 335 | 335/335 (100 %) | 11 diff (96.8 %id) | |||
CV803181 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 185 to 894 | 1 to 703 | 703/837 (83 %) | 8 diff (99.1 %id) | |||
CX758846 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 98 to 485 | 1 to 388 | Submitted on the opposite strand | 388/779 (49 %) | 4 diff (99.5 %id) | ||
CB990972 | placenta, pre-eclamptic placenta | .b | 2369 to 2884 | 27 to 549 | 523/912 (57 %) | 40 diff (95.7 %id) | |||
TI_59392879 | .b | 615 to 966 | 91 to 443 | 353/356 (99 %) | 2 diff (99.5 %id) | ||||
N84905 | .b | 1125 to 1335 | 1 to 212 | 212/212 (100 %) | 3 diff (98.6 %id) | ||||
CB135005 | Liver | .b | 2404 to 2948 | 1 to 545 | 545/545 (100 %) | 1 diff (99.9 %id) | |||
DA655331 | .a | 87 to 588 | 2 to 503 | capped | 502/553 (90 %) | 6 diff (99.0 %id) | |||
EB387209 | eye, optic nerve | .c | 1201 to 2038 | 1 to 839 | tiling clone, | 839/839 (100 %) | 2 diff (99.8 %id) | ||
EB388130 | eye, optic nerve | .t-u | 918 to 1666 | 1 to 748 | tiling clone, | 748/748 (100 %) | 3 diff (99.6 %id) | ||
NM_138962.2 | .a | 1 to 1581 | 1 to 1581 | exact | RefSeq, | 1581/1581 (100 %) | 0 diff (100 %id) | ||
NM_170721.1 | .f | 1 to 2149 | 2 to 2150 | exact | RefSeq, | 2150/2151 (99 %) | 5 diff (99.8 %id) | ||
CV572132 | cornea, eye | .f | 11 to 271 | 1 to 261 | AAA | 261/380 (68 %) | 0 diff (100 %id) | ||
CV570672 | cornea, eye | .b | 2506 to 3129 | 1 to 624 | 624/624 (100 %) | 0 diff (100 %id) | |||
CV575027 | cornea, eye | .b | 2385 to 3014 | 1 to 630 | 630/630 (100 %) | 0 diff (100 %id) | |||
DA811998 | ovary, tumor tissue | .b | 1384 to 2066 | 2 to 685 | tiling clone, capped | 684/684 (100 %) | 2 diff (99.8 %id) | ||
DB371264 | ovary, tumor tissue | .b | 2925 to 3413 | 490 to 1 | 490/534 (91 %) | 6 diff (98.9 %id) | |||
CR996313 | T-Lymphocytes | .vd-u | 1 to 376 | 1 to 377 | Q12E | tiling clone, | 377/377 (100 %) | 3 diff (99.3 %id) | |
BM760626 | lymph node, stomach | .f | 29 to 259 | 1 to 232 | 232/232 (100 %) | 3 diff (98.8 %id) | |||
BM838476 | lymph node, stomach | .n | 357 to 530 | 1 to 174 | 174/174 (100 %) | 1 diff (99.5 %id) | |||
BM840566 | lymph node, stomach | .o | 1 to 410 | 4 to 413 | D89E | 413/413 (100 %) | 2 diff (99.6 %id) | ||
BM840569 | lymph node, stomach | .o | 1 to 469 | 4 to 473 | exact | 473/473 (100 %) | 1 diff (99.8 %id) | ||
BM841161 | lymph node, stomach | .o | 1 to 523 | 4 to 526 | exact | tiling clone, | 526/526 (100 %) | 0 diff (100 %id) | |
BM842394 | lymph node, stomach | .o | 1 to 517 | 4 to 520 | exact | 520/520 (100 %) | 0 diff (100 %id) | ||
TI_1948121457 | .a | 577 to 1163 | 706 to 119 | 588/1439 (40 %) | 1 diff (100.0 %id) | ||||
TI_1948121598 | .a | 626 to 1163 | 646 to 109 | 538/1424 (37 %) | 5 diff (99.7 %id) | ||||
TI_1948121742 | .a | 626 to 1163 | 664 to 124 | 541/1356 (39 %) | 11 diff (99.2 %id) | ||||
TI_1948121890 | .a | 626 to 1163 | 656 to 118 | 539/1300 (41 %) | 1 diff (100.0 %id) | ||||
TI_1948236814 | .f | 476 to 789 | 920 to 609 | Submitted on the opposite strand | 312/1389 (22 %) | 12 diff (99.2 %id) | |||
TI_1948236815 | .f | 475 to 789 | 923 to 607 | Submitted on the opposite strand | 317/1401 (22 %) | 6 diff (99.6 %id) | |||
TI_1948236818 | .f | 335 to 789 | 139 to 593 | 455/667 (68 %) | 10 diff (98.6 %id) | ||||
DA968374 | stomach | .a | 68 to 588 | 2 to 522 | capped | 521/556 (93 %) | 13 diff (97.7 %id) | ||
DR001533 | fetal brain | .a | 201 to 866 | 1 to 665 | tiling clone, | 667/667 (100 %) | 9 diff (98.7 %id) | ||
BE246118 | leukopheresis | .b | 2503 to 2925 | 423 to 1 | 423/423 (100 %) | 2 diff (99.6 %id) | |||
BE247265 | leukopheresis | .l | 1 to 334 | 1 to 334 | tiling clone, | 334/334 (100 %) | 5 diff (98.6 %id) | ||
BE246810 | leukopheresis | .b | 2728 to 2925 | 198 to 1 | 198/198 (100 %) | 1 diff (99.5 %id) | |||
BE247603 | leukopheresis | .l | 1 to 385 | 1 to 384 | D28V S29L K32N C121W E122G ... | tiling clone, | 384/388 (98 %) | 8 diff (98.0 %id) | |
DB015753 | esophageal, tumor tissue | .a | 171 to 588 | 2 to 419 | capped | 418/560 (74 %) | 6 diff (99.0 %id) | ||
DB016756 | esophageal, tumor tissue | .f | 335 to 761 | 132 to 559 | capped | 428/559 (76 %) | 7 diff (98.8 %id) | ||
DB130913 | thymus | .g-u | 2774 to 3269 | 2 to 497 | capped | 496/496 (100 %) | 2 diff (99.6 %id) | ||
DB137564 | thymus | .m | 1 to 456 | 2 to 458 | F16L V17C T18H E20* | tiling clone, capped | 457/457 (100 %) | 1 diff (99.8 %id) | |
DB140287 | thymus | .t-u | 176 to 646 | 2 to 472 | tiling clone, to resequence, capped | 471/471 (100 %) | 0 diff (100 %id) | ||
DB345319 | thymus | .t-u | 3851 to 4405 | 555 to 1 | tiling clone, to resequence, | 555/555 (100 %) | 2 diff (99.7 %id) | ||
DB142280 | thymus | .t-u | 1701 to 2227 | 2 to 528 | tiling clone, capped | 527/527 (100 %) | 1 diff (99.9 %id) | ||
DB143539 | thymus | .j | 1 to 561 | 2 to 562 | M3V | tiling clone, capped | 561/561 (100 %) | 1 diff (99.9 %id) | |
DB147138 | thymus | .b | 466 to 1002 | 40 to 577 | capped | 538/576 (93 %) | 7 diff (98.8 %id) | ||
DB156612 | thymus | .f | 32 to 635 | 2 to 605 | capped | 604/604 (100 %) | 1 diff (99.9 %id) | ||
TI_149282747 | .b | 2959 to 3431 | 40 to 513 | Submitted on the opposite strand | 474/772 (61 %) | 5 diff (99.4 %id) | |||
TI_153988652 | .b | 3005 to 3431 | 497 to 71 | 427/497 (85 %) | 0 diff (100 %id) | ||||
TI_154032756 | .b | 2371 to 3180 | 55 to 863 | Submitted on the opposite strand | 809/1030 (78 %) | 9 diff (99.2 %id) | |||
TI_154143193 | .b | 2098 to 2670 | 80 to 654 | 575/813 (70 %) | 13 diff (98.5 %id) | ||||
TI_154148720 | .c | 1064 to 1573 | 68 to 575 | 508/575 (88 %) | 6 diff (99.0 %id) | ||||
TI_154158236 | .b | 381 to 798 | 207 to 624 | 418/550 (76 %) | 7 diff (98.8 %id) | ||||
DB200794 | trachea | .g-u | 4827 to 5405 | 2 to 581 | capped | 580/580 (100 %) | 3 diff (99.5 %id) | ||
DB348331 | trachea | .g-u | 6786 to 7332 | 547 to 1 | 547/547 (100 %) | 1 diff (99.9 %id) | |||
DB201322 | trachea | .f | 1 to 254 | 2 to 256 | capped | 255/255 (100 %) | 1 diff (99.7 %id) | ||
DB348356 | trachea | .f | 1333 to 1859 | 527 to 1 | 527/527 (100 %) | 1 diff (99.9 %id) | |||
BU679924 | lung, Primary Lung Epithelial Cells | .b | 2961 to 3413 | 1 to 453 | AAA | Submitted on the opposite strand | 453/453 (100 %) | 1 diff (99.8 %id) | |
BM672161 | eye, human retina | .q | 4771 to 5147 | 377 to 1 | fully sequenced, | 377/377 (100 %) | 3 diff (99.3 %id) | ||
BM700784 | eye, human retina | .q | 4303 to 4801 | 1 to 499 | fully sequenced, | 499/499 (100 %) | 5 diff (99.0 %id) | ||
BM664946 | eye, optic nerve | .e | 646 to 1199 | 557 to 1 | tiling clone, fully sequenced, | 557/557 (100 %) | 4 diff (99.3 %id) | ||
BM702269 | eye, optic nerve | .e | 1 to 676 | 1 to 676 | tiling clone, fully sequenced, | 676/676 (100 %) | 0 diff (100 %id) | ||
BM727230 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 703 to 828 | 1 to 126 | fully sequenced, | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 126/126 (100 %) | 0 diff (100 %id) | |
BU740790 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 767 to 1347 | 599 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 581/581 (100 %) | 0 diff (100 %id) | |
BM727644 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .p | 1 to 393 | 1 to 393 | exact | tiling clone, | 393/485 (81 %) | 0 diff (100 %id) | |
BQ186552 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 2580 to 3016 | 1 to 435 | fully sequenced, | 435/435 (100 %) | 2 diff (99.6 %id) | ||
CK301047 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 2986 to 3426 | 445 to 1 | fully sequenced, | 445/445 (100 %) | 2 diff (99.6 %id) | ||
BM725106 | eye, fetal eye | .b | 2153 to 2847 | 1 to 689 | fully sequenced, | 689/689 (100 %) | 5 diff (99.3 %id) | ||
BU742002 | eye, fetal eye | .b | 2817 to 3187 | 371 to 1 | fully sequenced, | 371/371 (100 %) | 4 diff (99.0 %id) | ||
CA426173 | Bone, Subchondral Bone | .b | 2628 to 3282 | 673 to 19 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 655/655 (100 %) | 0 diff (100 %id) | |
CA443096 | lung, Metastatic Chondrosarcoma | .b | 2375 to 3124 | 1 to 750 | Submitted on the opposite strand | 750/750 (100 %) | 2 diff (99.8 %id) | ||
BQ447277 | Knee, Osteoarthritic Cartilage | .b | 2382 to 2682 | 311 to 11 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 301/307 (98 %) | 1 diff (99.7 %id) | |
BU616558 | Cell Line, Chondrosarcoma | .b | 2563 to 3282 | 738 to 19 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 720/720 (100 %) | 1 diff (99.9 %id) | |
TI_151730791 | .b | 2579 to 3413 | 908 to 84 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 825/959 (86 %) | 12 diff (98.8 %id) | ||
W22508 | eye, retina | .va-u | 1 to 512 | 1 to 505 | Q14N H15I K16R E17K V18C ... | tiling clone, AAA | 505/614 (82 %) | 19 diff (97.0 %id) | |
AW361805 | colon | .b | 2455 to 2943 | 1 to 489 | 489/489 (100 %) | 0 diff (100 %id) | |||
BF954085 | nervous_normal | .b | 2588 to 3265 | 1 to 684 | This clone was ignored | 684/778 (87 %) | 14 diff (98.3 %id) | ||
BF956317 | nervous_normal | .b | 933 to 1340 | 1 to 408 | This clone was ignored | 408/408 (100 %) | 0 diff (100 %id) | ||
BF957445 | nervous_normal | .b | 933 to 1340 | 1 to 408 | This clone was ignored | 408/408 (100 %) | 0 diff (100 %id) | ||
BF958571 | nervous_normal | .b | 2796 to 3422 | 634 to 8 | This clone was ignored | 627/634 (98 %) | 0 diff (100 %id) | ||
BF961056 | nervous_normal | .b | 2796 to 3422 | 634 to 8 | This clone was ignored | 627/634 (98 %) | 0 diff (100 %id) | ||
BF963520 | nervous_normal | .b | 933 to 1582 | 1 to 651 | This clone was ignored | 651/651 (100 %) | 1 diff (99.9 %id) | ||
BQ342872 | nervous_normal | .b | 933 to 1582 | 1 to 651 | This clone was ignored | 651/651 (100 %) | 1 diff (99.9 %id) | ||
BQ343087 | nervous_normal | .g-u | 7023 to 7610 | 590 to 2 | This clone was ignored | 589/590 (99 %) | 0 diff (100 %id) | ||
BQ343095 | nervous_normal | .g-u | 7023 to 7610 | 590 to 2 | This clone was ignored | 589/590 (99 %) | 0 diff (100 %id) | ||
BQ343105 | nervous_normal | .b | 2386 to 2925 | 1 to 540 | This clone was ignored | 540/766 (70 %) | 8 diff (99.0 %id) | ||
BQ343162 | nervous_normal | .b | 2386 to 2925 | 1 to 540 | This clone was ignored | 540/766 (70 %) | 8 diff (99.0 %id) | ||
BQ343179 | nervous_normal | .d | 1 to 881 | 1 to 883 | tiling clone, | This clone was ignored | 883/884 (99 %) | 10 diff (98.9 %id) | |
BX119310 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .d | 1 to 881 | 1 to 883 | tiling clone, | 883/884 (99 %) | 10 diff (98.9 %id) | ||
CV392082 | nervous_normal | .b | 466 to 1265 | 8 to 809 | Submitted on the opposite strand | 802/862 (93 %) | 8 diff (99.1 %id) | ||
FN117082 | breast carcinoma | .b | 466 to 1265 | 8 to 809 | Submitted on the opposite strand | 802/862 (93 %) | 8 diff (99.1 %id) | ||
AV700840 | hepatocellular carcinoma | .t-u | 40 to 960 | 1 to 926 | tiling clone, AAA | Submitted on the opposite strand, submitted on the opposite strand | 926/927 (99 %) | 19 diff (98.0 %id) | |
AA678078 | liver and spleen | .t-u | 40 to 931 | 1 to 897 | 897/911 (98 %) | 9 diff (99.1 %id) | |||
AA447745 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 2386 to 3275 | 1 to 896 | 896/900 (99 %) | 21 diff (97.7 %id) | |||
AA453676 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 2386 to 3275 | 1 to 896 | 896/900 (99 %) | 21 diff (97.7 %id) | |||
AA601573 | pheochromocytoma | .f | 599 to 1510 | 1 to 917 | 917/922 (99 %) | 16 diff (98.3 %id) | |||
AI095223 | B-cell, chronic lymphotic leukemia | .f | 599 to 1510 | 1 to 917 | 917/922 (99 %) | 16 diff (98.3 %id) | |||
AI917592 | colon, colon tumor, RER+ | .b | 3327 to 3408 | 82 to 1 | Suspected internal deletion, this clone was ignored | 82/82 (100 %) | 0 diff (100 %id) | ||
AW297977 | .b | 3327 to 3408 | 82 to 1 | Suspected internal deletion, this clone was ignored | 82/82 (100 %) | 0 diff (100 %id) | |||
DB155662 | thymus | .b | 2386 to 2992 | 11 to 617 | capped | 607/617 (98 %) | 6 diff (99.1 %id) | ||
DB346460 | thymus | .b | 2386 to 2992 | 11 to 617 | 607/617 (98 %) | 6 diff (99.1 %id) | |||
BU852870 | testis | .b | 2644 to 3409 | 1 to 777 | tiling clone, | 777/786 (98 %) | 22 diff (97.3 %id) | ||
BU857812 | adenocarcinoma, cell line, breast | .c | 1 to 770 | 1 to 772 | tiling clone, | 772/945 (81 %) | 8 diff (99.2 %id) | ||
BU857812 | adenocarcinoma, cell line, breast | .c | 1 to 770 | 1 to 772 | tiling clone, | 772/945 (81 %) | 8 diff (99.2 %id) | ||
BU956254 | adenocarcinoma, cell line, breast | .u | 317 to 939 | 127 to 753 | exact | tiling clone, | 627/1025 (61 %) | 17 diff (98.4 %id) | |
BU956254 | adenocarcinoma, cell line, breast | .u | 317 to 939 | 127 to 753 | exact | tiling clone, | 627/1025 (61 %) | 17 diff (98.4 %id) | |
BU956366 | adenocarcinoma, cell line, breast | .n | 5 to 532 | 1 to 528 | 528/536 (98 %) | 1 diff (99.9 %id) | |||
BU956366 | adenocarcinoma, cell line, breast | .n | 5 to 532 | 1 to 528 | 528/536 (98 %) | 1 diff (99.9 %id) | |||
BU957799 | mixed (pool of 40 RNAs) | .b | 3115 to 3449 | 1 to 335 | 335/335 (100 %) | 11 diff (96.8 %id) | |||
CV803181 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 185 to 894 | 1 to 703 | 703/837 (83 %) | 8 diff (99.1 %id) | |||
CV803181 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 185 to 894 | 1 to 703 | 703/837 (83 %) | 8 diff (99.1 %id) | |||
CX758846 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 98 to 485 | 1 to 388 | Submitted on the opposite strand | 388/779 (49 %) | 4 diff (99.5 %id) | ||
CX758846 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .a | 98 to 485 | 1 to 388 | Submitted on the opposite strand | 388/779 (49 %) | 4 diff (99.5 %id) | ||
CB990972 | placenta, pre-eclamptic placenta | .b | 2369 to 2884 | 27 to 549 | 523/912 (57 %) | 40 diff (95.7 %id) | |||
CB990972 | placenta, pre-eclamptic placenta | .b | 2369 to 2884 | 27 to 549 | 523/912 (57 %) | 40 diff (95.7 %id) | |||
TI_59392879 | .b | 615 to 966 | 91 to 443 | 353/356 (99 %) | 2 diff (99.5 %id) | ||||
N84905 | .b | 1125 to 1335 | 1 to 212 | 212/212 (100 %) | 3 diff (98.6 %id) | ||||
CB135005 | Liver | .b | 2404 to 2948 | 1 to 545 | 545/545 (100 %) | 1 diff (99.9 %id) | |||
DA655331 | .a | 87 to 588 | 2 to 503 | capped | 502/553 (90 %) | 6 diff (99.0 %id) | |||
EB387209 | eye, optic nerve | .c | 1201 to 2038 | 1 to 839 | tiling clone, | 839/839 (100 %) | 2 diff (99.8 %id) | ||
EB387209 | eye, optic nerve | .c | 1201 to 2038 | 1 to 839 | tiling clone, | 839/839 (100 %) | 2 diff (99.8 %id) | ||
EB388130 | eye, optic nerve | .t-u | 918 to 1666 | 1 to 748 | tiling clone, | 748/748 (100 %) | 3 diff (99.6 %id) | ||
EB388130 | eye, optic nerve | .t-u | 918 to 1666 | 1 to 748 | tiling clone, | 748/748 (100 %) | 3 diff (99.6 %id) | ||
NM_138962.2 | .a | 1 to 1581 | 1 to 1581 | exact | RefSeq, | 1581/1581 (100 %) | 0 diff (100 %id) | ||
NM_170721.1 | .f | 1 to 2149 | 2 to 2150 | exact | RefSeq, | 2150/2151 (99 %) | 5 diff (99.8 %id) | ||
CV572132 | cornea, eye | .f | 11 to 271 | 1 to 261 | AAA | 261/380 (68 %) | 0 diff (100 %id) | ||
CV572132 | cornea, eye | .f | 11 to 271 | 1 to 261 | AAA | 261/380 (68 %) | 0 diff (100 %id) | ||
CV570672 | cornea, eye | .b | 2506 to 3129 | 1 to 624 | 624/624 (100 %) | 0 diff (100 %id) | |||
CV570672 | cornea, eye | .b | 2506 to 3129 | 1 to 624 | 624/624 (100 %) | 0 diff (100 %id) | |||
CV575027 | cornea, eye | .b | 2385 to 3014 | 1 to 630 | 630/630 (100 %) | 0 diff (100 %id) | |||
CV575027 | cornea, eye | .b | 2385 to 3014 | 1 to 630 | 630/630 (100 %) | 0 diff (100 %id) | |||
DA811998 | ovary, tumor tissue | .b | 1384 to 2066 | 2 to 685 | tiling clone, capped | 684/684 (100 %) | 2 diff (99.8 %id) | ||
DB371264 | ovary, tumor tissue | .b | 2925 to 3413 | 490 to 1 | 490/534 (91 %) | 6 diff (98.9 %id) | |||
CR996313 | T-Lymphocytes | .vd-u | 1 to 376 | 1 to 377 | Q12E | tiling clone, | 377/377 (100 %) | 3 diff (99.3 %id) | |
BM760626 | lymph node, stomach | .f | 29 to 259 | 1 to 232 | 232/232 (100 %) | 3 diff (98.8 %id) | |||
BM760626 | lymph node, stomach | .f | 29 to 259 | 1 to 232 | 232/232 (100 %) | 3 diff (98.8 %id) | |||
BM838476 | lymph node, stomach | .n | 357 to 530 | 1 to 174 | 174/174 (100 %) | 1 diff (99.5 %id) | |||
BM838476 | lymph node, stomach | .n | 357 to 530 | 1 to 174 | 174/174 (100 %) | 1 diff (99.5 %id) | |||
BM840566 | lymph node, stomach | .o | 1 to 410 | 4 to 413 | D89E | 413/413 (100 %) | 2 diff (99.6 %id) | ||
BM840566 | lymph node, stomach | .o | 1 to 410 | 4 to 413 | D89E | 413/413 (100 %) | 2 diff (99.6 %id) | ||
BM840569 | lymph node, stomach | .o | 1 to 469 | 4 to 473 | exact | 473/473 (100 %) | 1 diff (99.8 %id) | ||
BM840569 | lymph node, stomach | .o | 1 to 469 | 4 to 473 | exact | 473/473 (100 %) | 1 diff (99.8 %id) | ||
BM841161 | lymph node, stomach | .o | 1 to 523 | 4 to 526 | exact | tiling clone, | 526/526 (100 %) | 0 diff (100 %id) | |
BM841161 | lymph node, stomach | .o | 1 to 523 | 4 to 526 | exact | tiling clone, | 526/526 (100 %) | 0 diff (100 %id) | |
BM842394 | lymph node, stomach | .o | 1 to 517 | 4 to 520 | exact | 520/520 (100 %) | 0 diff (100 %id) | ||
BM842394 | lymph node, stomach | .o | 1 to 517 | 4 to 520 | exact | 520/520 (100 %) | 0 diff (100 %id) | ||
TI_1948121457 | .a | 577 to 1163 | 706 to 119 | 588/1439 (40 %) | 1 diff (100.0 %id) | ||||
TI_1948121598 | .a | 626 to 1163 | 646 to 109 | 538/1424 (37 %) | 5 diff (99.7 %id) | ||||
TI_1948121742 | .a | 626 to 1163 | 664 to 124 | 541/1356 (39 %) | 11 diff (99.2 %id) | ||||
TI_1948121890 | .a | 626 to 1163 | 656 to 118 | 539/1300 (41 %) | 1 diff (100.0 %id) | ||||
TI_1948236814 | .f | 476 to 789 | 920 to 609 | Submitted on the opposite strand | 312/1389 (22 %) | 12 diff (99.2 %id) | |||
TI_1948236815 | .f | 475 to 789 | 923 to 607 | Submitted on the opposite strand | 317/1401 (22 %) | 6 diff (99.6 %id) | |||
TI_1948236818 | .f | 335 to 789 | 139 to 593 | 455/667 (68 %) | 10 diff (98.6 %id) | ||||
DA968374 | stomach | .a | 68 to 588 | 2 to 522 | capped | 521/556 (93 %) | 13 diff (97.7 %id) | ||
DR001533 | fetal brain | .a | 201 to 866 | 1 to 665 | tiling clone, | 667/667 (100 %) | 9 diff (98.7 %id) | ||
BE246118 | leukopheresis | .b | 2503 to 2925 | 423 to 1 | 423/423 (100 %) | 2 diff (99.6 %id) | |||
BE247265 | leukopheresis | .l | 1 to 334 | 1 to 334 | tiling clone, | 334/334 (100 %) | 5 diff (98.6 %id) | ||
BE246810 | leukopheresis | .b | 2728 to 2925 | 198 to 1 | 198/198 (100 %) | 1 diff (99.5 %id) | |||
BE247603 | leukopheresis | .l | 1 to 385 | 1 to 384 | D28V S29L K32N C121W E122G ... | tiling clone, | 384/388 (98 %) | 8 diff (98.0 %id) | |
DB015753 | esophageal, tumor tissue | .a | 171 to 588 | 2 to 419 | capped | 418/560 (74 %) | 6 diff (99.0 %id) | ||
DB016756 | esophageal, tumor tissue | .f | 335 to 761 | 132 to 559 | capped | 428/559 (76 %) | 7 diff (98.8 %id) | ||
DB130913 | thymus | .g-u | 2774 to 3269 | 2 to 497 | capped | 496/496 (100 %) | 2 diff (99.6 %id) | ||
DB137564 | thymus | .m | 1 to 456 | 2 to 458 | F16L V17C T18H E20* | tiling clone, capped | 457/457 (100 %) | 1 diff (99.8 %id) | |
DB140287 | thymus | .t-u | 176 to 646 | 2 to 472 | tiling clone, to resequence, capped | 471/471 (100 %) | 0 diff (100 %id) | ||
DB345319 | thymus | .t-u | 3851 to 4405 | 555 to 1 | tiling clone, to resequence, | 555/555 (100 %) | 2 diff (99.7 %id) | ||
DB142280 | thymus | .t-u | 1701 to 2227 | 2 to 528 | tiling clone, capped | 527/527 (100 %) | 1 diff (99.9 %id) | ||
DB143539 | thymus | .j | 1 to 561 | 2 to 562 | M3V | tiling clone, capped | 561/561 (100 %) | 1 diff (99.9 %id) | |
DB147138 | thymus | .b | 466 to 1002 | 40 to 577 | capped | 538/576 (93 %) | 7 diff (98.8 %id) | ||
DB156612 | thymus | .f | 32 to 635 | 2 to 605 | capped | 604/604 (100 %) | 1 diff (99.9 %id) | ||
TI_149282747 | .b | 2959 to 3431 | 40 to 513 | Submitted on the opposite strand | 474/772 (61 %) | 5 diff (99.4 %id) | |||
TI_153988652 | .b | 3005 to 3431 | 497 to 71 | 427/497 (85 %) | 0 diff (100 %id) | ||||
TI_154032756 | .b | 2371 to 3180 | 55 to 863 | Submitted on the opposite strand | 809/1030 (78 %) | 9 diff (99.2 %id) | |||
TI_154143193 | .b | 2098 to 2670 | 80 to 654 | 575/813 (70 %) | 13 diff (98.5 %id) | ||||
TI_154148720 | .c | 1064 to 1573 | 68 to 575 | 508/575 (88 %) | 6 diff (99.0 %id) | ||||
TI_154158236 | .b | 381 to 798 | 207 to 624 | 418/550 (76 %) | 7 diff (98.8 %id) | ||||
DB200794 | trachea | .g-u | 4827 to 5405 | 2 to 581 | capped | 580/580 (100 %) | 3 diff (99.5 %id) | ||
DB348331 | trachea | .g-u | 6786 to 7332 | 547 to 1 | 547/547 (100 %) | 1 diff (99.9 %id) | |||
DB201322 | trachea | .f | 1 to 254 | 2 to 256 | capped | 255/255 (100 %) | 1 diff (99.7 %id) | ||
DB348356 | trachea | .f | 1333 to 1859 | 527 to 1 | 527/527 (100 %) | 1 diff (99.9 %id) | |||
BU679924 | lung, Primary Lung Epithelial Cells | .b | 2961 to 3413 | 1 to 453 | AAA | Submitted on the opposite strand | 453/453 (100 %) | 1 diff (99.8 %id) | |
BU679924 | lung, Primary Lung Epithelial Cells | .b | 2961 to 3413 | 1 to 453 | AAA | Submitted on the opposite strand | 453/453 (100 %) | 1 diff (99.8 %id) | |
BM672161 | eye, human retina | .q | 4771 to 5147 | 377 to 1 | fully sequenced, | 377/377 (100 %) | 3 diff (99.3 %id) | ||
BM672161 | eye, human retina | .q | 4771 to 5147 | 377 to 1 | fully sequenced, | 377/377 (100 %) | 3 diff (99.3 %id) | ||
BM700784 | eye, human retina | .q | 4303 to 4801 | 1 to 499 | fully sequenced, | 499/499 (100 %) | 5 diff (99.0 %id) | ||
BM700784 | eye, human retina | .q | 4303 to 4801 | 1 to 499 | fully sequenced, | 499/499 (100 %) | 5 diff (99.0 %id) | ||
BM664946 | eye, optic nerve | .e | 646 to 1199 | 557 to 1 | tiling clone, fully sequenced, | 557/557 (100 %) | 4 diff (99.3 %id) | ||
BM664946 | eye, optic nerve | .e | 646 to 1199 | 557 to 1 | tiling clone, fully sequenced, | 557/557 (100 %) | 4 diff (99.3 %id) | ||
BM702269 | eye, optic nerve | .e | 1 to 676 | 1 to 676 | tiling clone, fully sequenced, | 676/676 (100 %) | 0 diff (100 %id) | ||
BM702269 | eye, optic nerve | .e | 1 to 676 | 1 to 676 | tiling clone, fully sequenced, | 676/676 (100 %) | 0 diff (100 %id) | ||
BM727230 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 703 to 828 | 1 to 126 | fully sequenced, | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 126/126 (100 %) | 0 diff (100 %id) | |
BM727230 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 703 to 828 | 1 to 126 | fully sequenced, | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 126/126 (100 %) | 0 diff (100 %id) | |
BU740790 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 767 to 1347 | 599 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 581/581 (100 %) | 0 diff (100 %id) | |
BU740790 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 767 to 1347 | 599 to 19 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 581/581 (100 %) | 0 diff (100 %id) | |
BM727644 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .p | 1 to 393 | 1 to 393 | exact | tiling clone, | 393/485 (81 %) | 0 diff (100 %id) | |
BM727644 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .p | 1 to 393 | 1 to 393 | exact | tiling clone, | 393/485 (81 %) | 0 diff (100 %id) | |
BQ186552 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 2580 to 3016 | 1 to 435 | fully sequenced, | 435/435 (100 %) | 2 diff (99.6 %id) | ||
BQ186552 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 2580 to 3016 | 1 to 435 | fully sequenced, | 435/435 (100 %) | 2 diff (99.6 %id) | ||
CK301047 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 2986 to 3426 | 445 to 1 | fully sequenced, | 445/445 (100 %) | 2 diff (99.6 %id) | ||
CK301047 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .b | 2986 to 3426 | 445 to 1 | fully sequenced, | 445/445 (100 %) | 2 diff (99.6 %id) | ||
BM725106 | eye, fetal eye | .b | 2153 to 2847 | 1 to 689 | fully sequenced, | 689/689 (100 %) | 5 diff (99.3 %id) | ||
BM725106 | eye, fetal eye | .b | 2153 to 2847 | 1 to 689 | fully sequenced, | 689/689 (100 %) | 5 diff (99.3 %id) | ||
BU742002 | eye, fetal eye | .b | 2817 to 3187 | 371 to 1 | fully sequenced, | 371/371 (100 %) | 4 diff (99.0 %id) | ||
BU742002 | eye, fetal eye | .b | 2817 to 3187 | 371 to 1 | fully sequenced, | 371/371 (100 %) | 4 diff (99.0 %id) | ||
CA426173 | Bone, Subchondral Bone | .b | 2628 to 3282 | 673 to 19 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 655/655 (100 %) | 0 diff (100 %id) | |
CA426173 | Bone, Subchondral Bone | .b | 2628 to 3282 | 673 to 19 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 655/655 (100 %) | 0 diff (100 %id) | |
CA443096 | lung, Metastatic Chondrosarcoma | .b | 2375 to 3124 | 1 to 750 | Submitted on the opposite strand | 750/750 (100 %) | 2 diff (99.8 %id) | ||
CA443096 | lung, Metastatic Chondrosarcoma | .b | 2375 to 3124 | 1 to 750 | Submitted on the opposite strand | 750/750 (100 %) | 2 diff (99.8 %id) | ||
BQ447277 | Knee, Osteoarthritic Cartilage | .b | 2382 to 2682 | 311 to 11 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 301/307 (98 %) | 1 diff (99.7 %id) | |
BQ447277 | Knee, Osteoarthritic Cartilage | .b | 2382 to 2682 | 311 to 11 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 301/307 (98 %) | 1 diff (99.7 %id) | |
BU616558 | Cell Line, Chondrosarcoma | .b | 2563 to 3282 | 738 to 19 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 720/720 (100 %) | 1 diff (99.9 %id) | |
BU616558 | Cell Line, Chondrosarcoma | .b | 2563 to 3282 | 738 to 19 | AAA | Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) | 720/720 (100 %) | 1 diff (99.9 %id) | |
TI_151730791 | .b | 2579 to 3413 | 908 to 84 | AAA | Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) | 825/959 (86 %) | 12 diff (98.8 %id) | ||
W22508 | eye, retina | .va-u | 1 to 512 | 1 to 505 | Q14N H15I K16R E17K V18C ... | tiling clone, AAA | 505/614 (82 %) | 19 diff (97.0 %id) | |
W22508 | eye, retina | .va-u | 1 to 512 | 1 to 505 | Q14N H15I K16R E17K V18C ... | tiling clone, AAA | 505/614 (82 %) | 19 diff (97.0 %id) |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i-u, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va-u, .vb-u, .vc-u, .vd-u, .ve-u, .vf-u | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes C |