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Gene MOGAT2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
43 supporting clones for gene MOGAT2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA922421 small intestine .a 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
BP262479 small intestine .a 2 to 569 1 to 568       568/568
(100 %)
4 diff
(99.3 %id)
AK291998 small intestine .a 25 to 1404 1 to 1380 exact tiling clone,   1380/1380
(100 %)
1 diff
(100.0 %id)
DA929024 small intestine .a 26 to 594 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BP271065 small intestine .a 27 to 609 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BX482703   .a 40 to 557 1 to 519       519/519
(100 %)
2 diff
(99.7 %id)
AY157608 intestine .a 71 to 1075 1 to 1005 exact     1005/1005
(100 %)
0 diff
(100 %id)
BC103876 PCR rescued clones .a 71 to 1075 1 to 1005 exact     1005/1005
(100 %)
0 diff
(100 %id)
BC103877 PCR rescued clones .a 71 to 1075 1 to 1005 M9V     1005/1005
(100 %)
1 diff
(100.0 %id)
NM_025098.2   .a 71 to 1075 1 to 1005 exact RefSeq,   1005/1005
(100 %)
0 diff
(100 %id)
Z11852   .a 364 to 514 150 to 1     Submitted on the opposite strand 150/164
(91 %)
1 diff
(99.4 %id)
DR004181 Liver .a 546 to 1128 31 to 612       582/612
(95 %)
6 diff
(99.1 %id)
BF374606 stomach .a 670 to 871 13 to 212       200/212
(94 %)
9 diff
(95.8 %id)
AW809961 stomach .a 678 to 881 215 to 11       205/215
(95 %)
2 diff
(99.1 %id)
AW809845 stomach .a 679 to 887 220 to 9       212/221
(95 %)
1 diff
(99.6 %id)
AW809898 stomach .a 680 to 876 203 to 5       199/203
(98 %)
0 diff
(100 %id)
BF374574 stomach .a 680 to 876 204 to 8       197/204
(96 %)
0 diff
(100 %id)
BF374587 stomach .a 680 to 868 1 to 189       189/194
(97 %)
3 diff
(98.5 %id)
BC103878 PCR rescued clones .b 1 to 1650 1 to 1650 exact tiling clone,   1650/1650
(100 %)
0 diff
(100 %id)
AW810630 stomach .b 828 to 1454 630 to 4       627/630
(99 %)
0 diff
(100 %id)
BF374729 stomach .b 1072 to 1446 1 to 375       375/375
(100 %)
4 diff
(99.0 %id)
CD632453   .b 1086 to 1434 1 to 348       348/349
(99 %)
6 diff
(98.3 %id)
CD632454   .b 1093 to 1432 339 to 1       339/346
(97 %)
1 diff
(99.8 %id)
AK128620 trachea .c 1 to 3203 2 to 3204 F185L tiling clone, available from FLJ,   3204/3204
(100 %)
3 diff
(100.0 %id)
DB233093 trachea .c 1 to 596 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
DA641891 Liver .c 487 to 1081 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
DA637398 Liver .c 551 to 1091 2 to 542   capped   541/545
(99 %)
2 diff
(99.7 %id)
BP271358 small intestine .c 559 to 1140 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BM819465 stomach .c 1715 to 2190 1 to 476       476/476
(100 %)
3 diff
(99.4 %id)
BG674053 skin .c 1824 to 2764 1 to 955   tiling clone,   955/1079
(88 %)
40 diff
(96.3 %id)
AW852902 colon .c 2113 to 2681 571 to 1       571/571
(100 %)
17 diff
(97.1 %id)
AW852653 colon .c 2139 to 2695 558 to 3       556/562
(98 %)
0 diff
(100 %id)
DB350121 trachea .c 2655 to 3203 549 to 1       549/549
(100 %)
0 diff
(100 %id)
AA722886 heart .c 2662 to 3203 541 to 1       541/541
(100 %)
1 diff
(99.9 %id)
D25664   .c 2690 to 3055 1 to 377     Submitted on the opposite strand 377/451
(83 %)
16 diff
(96.5 %id)
BG980611 colon_normal .c 2784 to 3051 17 to 284       268/291
(92 %)
11 diff
(96.3 %id)
BG980610 colon_normal .c 2798 to 3051 32 to 284       253/291
(86 %)
7 diff
(97.6 %id)
AW176389 breast .c 2862 to 2996 135 to 1       135/147
(91 %)
0 diff
(100 %id)
DA749851   .d 1 to 574 2 to 575 exact tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DA924535 small intestine .e-u 1 to 579 2 to 580   tiling clone, capped   579/584
(99 %)
1 diff
(99.9 %id)
AK000245 colon mucosa .e-u 34 to 1989 1 to 1956 exact tiling clone, available from FLJ, AAA   1956/1956
(100 %)
1 diff
(100.0 %id)
AW841567 colon_normal .e-u 51 to 660 614 to 4       611/614
(99 %)
0 diff
(100 %id)
AK026297 human small intestine Gene MOGAT2, variant not shown       available from FLJ, AAA This clone was ignored    
BP221777 colon Gene MOGAT2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C