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Gene APIPTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
267 supporting clones for gene APIP back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP195958 brain APIP.a 1 to 581 2 to 583   tiling clone,   583/583
(100 %)
23 diff
(96.1 %id)
CF145910 CNCAP(3)T-225 cell line, Prostate APIP.a 18 to 372 8 to 362       355/362
(98 %)
10 diff
(97.3 %id)
TI_154178175   APIP.a 18 to 576 81 to 639       559/559
(100 %)
16 diff
(97.2 %id)
AK302225 testis APIP.a 43 to 1054 1 to 1012 V14A D37N L44P I45L tiling clone,   1012/1012
(100 %)
6 diff
(99.5 %id)
DC398615 testis APIP.a 43 to 609 1 to 567       567/567
(100 %)
6 diff
(99.0 %id)
DC302667 cerebellum APIP.a 55 to 601 1 to 547   tiling clone,   547/547
(100 %)
0 diff
(100 %id)
BG504577 embryonal carcinoma, testis APIP.a 61 to 546 1 to 486       486/486
(100 %)
2 diff
(99.6 %id)
EL954639 eyeball APIP.a 194 to 721 35 to 561       527/561
(93 %)
12 diff
(97.9 %id)
BM797073 Ascites, stomach APIP.a 304 to 743 1 to 440       440/440
(100 %)
16 diff
(96.4 %id)
CN264361 embryonic stem cells, cell lines H1, H7, andH9 APIP.a 314 to 736 83 to 505       423/505
(83 %)
11 diff
(97.9 %id)
BM263189 Islets of Langerhans, Pancreas APIP.a 345 to 904 1 to 560       560/560
(100 %)
0 diff
(100 %id)
D79292 aorta APIP.a 348 to 630 10 to 293       293/293
(100 %)
4 diff
(98.7 %id)
TI_1948085175   APIP.a 360 to 923 684 to 117       568/1316
(43 %)
16 diff
(98.8 %id)
AL703036 human skeletal muscle APIP.a 388 to 934 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
BQ219638 epithelioid carcinoma, Pancreas APIP.a 418 to 957 231 to 784       554/1014
(54 %)
47 diff
(95.4 %id)
TI_1948237784   APIP.a 433 to 923 1099 to 602     Submitted on the opposite strand 498/1221
(40 %)
26 diff
(97.9 %id)
AW606269 head_neck APIP.a 451 to 699 256 to 5       252/274
(91 %)
11 diff
(96.0 %id)
BE155816 head_neck APIP.a 456 to 716 1 to 261       261/261
(100 %)
2 diff
(99.3 %id)
EL949618 eyeball APIP.a 461 to 880 1 to 407       409/407
(100 %)
15 diff
(96.4 %id)
BM746745 Ascites, stomach APIP.a 472 to 836 1 to 365       365/365
(100 %)
1 diff
(99.8 %id)
N53080 multiple sclerosis lesions APIP.a 499 to 722 1 to 223       223/225
(99 %)
2 diff
(99.2 %id)
BM738914 Ascites, stomach APIP.a 500 to 930 1 to 431       431/431
(100 %)
2 diff
(99.6 %id)
BG611497 adenocarcinoma, Prostate APIP.a 504 to 840 1 to 337       337/340
(99 %)
1 diff
(99.8 %id)
BM753395 Ascites, stomach APIP.a 535 to 914 1 to 383       383/383
(100 %)
8 diff
(98.0 %id)
TI_1948238022   APIP.a 544 to 923 497 to 119       379/401
(94 %)
1 diff
(99.8 %id)
TI_1948073604   APIP.a 576 to 923 470 to 124       347/369
(94 %)
0 diff
(100 %id)
TI_1948237344   APIP.a 596 to 923 453 to 127       327/349
(93 %)
0 diff
(100 %id)
TI_1948237345   APIP.a 676 to 923 366 to 120       247/269
(91 %)
0 diff
(100 %id)
FN134235 breast carcinoma APIP.a 796 to 885 90 to 1     Submitted on the opposite strand 90/91
(98 %)
0 diff
(100 %id)
BP200131 amygdala APIP.b 1 to 580 1 to 582   tiling clone,   582/582
(100 %)
5 diff
(99.2 %id)
BF184844 bone marrow, from chronic myelogenous leukemia APIP.b 89 to 747 1 to 652       652/652
(100 %)
17 diff
(97.4 %id)
NM_015957.2   APIP.b 109 to 1364 1 to 1256 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 1256/1256
(100 %)
0 diff
(100 %id)
BM314624 Pancreas, Purified pancreatic islet APIP.b 110 to 738 1 to 629       629/629
(100 %)
5 diff
(99.3 %id)
DA729016   APIP.b 110 to 876 2 to 766   fully sequenced, capped   765/765
(100 %)
2 diff
(99.8 %id)
BF185177 bone marrow, from chronic myelogenous leukemia APIP.b 115 to 773 26 to 685       660/888
(74 %)
35 diff
(96.1 %id)
BG570423 lung APIP.b 117 to 748 1 to 632       632/633
(99 %)
19 diff
(97.0 %id)
BM785310 stomach APIP.b 118 to 715 1 to 598       598/598
(100 %)
5 diff
(99.2 %id)
BU595211 mixed (pool of 40 RNAs) APIP.b 119 to 636 1 to 520       520/951
(54 %)
16 diff
(98.4 %id)
BF668190 brain, primitive neuroectoderm APIP.b 120 to 840 1 to 709       709/736
(96 %)
33 diff
(95.6 %id)
BF665590 brain, primitive neuroectoderm APIP.b 121 to 823 1 to 696       696/720
(96 %)
26 diff
(96.4 %id)
BF669522 brain, primitive neuroectoderm APIP.b 121 to 821 1 to 700       698/901
(77 %)
79 diff
(91.3 %id)
BF665137 brain, primitive neuroectoderm APIP.b 121 to 391 1 to 271       271/271
(100 %)
6 diff
(97.8 %id)
BF697923 brain, primitive neuroectoderm APIP.b 121 to 839 1 to 711       709/849
(83 %)
40 diff
(95.3 %id)
AK292648 thymus APIP.b 122 to 951 1 to 830 R7W C76Y     830/830
(100 %)
5 diff
(99.4 %id)
CB121799 Liver APIP.b 122 to 710 1 to 587       587/587
(100 %)
6 diff
(99.0 %id)
BP871185 embryonal kidney APIP.b 123 to 454 1 to 332       332/332
(100 %)
4 diff
(98.8 %id)
BC008440 Bone marrow, chronic myelogenous leukemia APIP.b 123 to 1287 1 to 1165 H23R M181V available from MGC, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 1165/1165
(100 %)
2 diff
(99.9 %id)
DA131724 alzheimer cortex APIP.b 123 to 660 2 to 540   capped   539/539
(100 %)
3 diff
(99.5 %id)
BP235119 coronary artery APIP.b 123 to 703 1 to 581       581/581
(100 %)
4 diff
(99.4 %id)
BP246585 Kidney APIP.b 123 to 681 1 to 559       559/603
(92 %)
7 diff
(98.9 %id)
BP281832 bone marrow APIP.b 123 to 681 1 to 558       558/583
(95 %)
6 diff
(99.0 %id)
DB128197 thymus APIP.b 123 to 698 2 to 578   capped   577/577
(100 %)
6 diff
(99.0 %id)
DB265827 uterus APIP.b 123 to 681 2 to 562   capped   561/574
(97 %)
9 diff
(98.5 %id)
BE735647 adenocarcinoma, Pancreas APIP.b 129 to 781 1 to 648       648/648
(100 %)
13 diff
(98.0 %id)
DB043182 testis APIP.b 129 to 701 2 to 574   capped   573/573
(100 %)
6 diff
(99.0 %id)
BG430781 Kidney APIP.b 131 to 811 1 to 685       685/686
(99 %)
18 diff
(97.4 %id)
BG430760 Kidney APIP.b 131 to 779 1 to 649       649/649
(100 %)
8 diff
(98.8 %id)
CR621391 T cells (Jurkat cell line) Cot10-normalized APIP.b 137 to 1331 1 to 1195 exact tiling clone,   1195/1195
(100 %)
0 diff
(100 %id)
AL559009 T cells from T cell leukemia APIP.b 137 to 708 1 to 573   fully sequenced,   573/573
(100 %)
1 diff
(99.9 %id)
BF663797 B-cells, primary B-cells from tonsils (cell line) APIP.b 137 to 854 1 to 725       725/766
(94 %)
21 diff
(97.3 %id)
BF664318 B-cells, primary B-cells from tonsils (cell line) APIP.b 137 to 853 1 to 716       716/1035
(69 %)
19 diff
(98.2 %id)
BM469481 lymph, lymphoma, cell line APIP.b 137 to 848 1 to 718   AAA   718/974
(73 %)
12 diff
(98.8 %id)
BU182280 eye, retinoblastoma APIP.b 137 to 999 1 to 873 K171X W200V E202G T203K W204H ...     873/875
(99 %)
16 diff
(98.2 %id)
DA588251 lung APIP.b 138 to 705 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BF667742 brain, primitive neuroectoderm APIP.b 139 to 820 1 to 679       679/838
(81 %)
25 diff
(97.1 %id)
BM450291 eye, retinoblastoma APIP.b 139 to 964 1 to 834 L159V I164L E165R N166I T167H ...     834/1004
(83 %)
28 diff
(97.3 %id)
AV705827 adrenal gland APIP.b 140 to 503 1 to 364       364/382
(95 %)
5 diff
(98.7 %id)
AF132963   APIP.b 140 to 1364 1 to 1226 R7G D172T     1226/1226
(100 %)
7 diff
(99.5 %id)
AA251944 germinal center B cell APIP.b 140 to 492 1 to 353       353/353
(100 %)
4 diff
(98.9 %id)
BU598128 mixed (pool of 40 RNAs) APIP.b 140 to 677 1 to 544       544/940
(57 %)
18 diff
(98.1 %id)
DN991681 brain, whole brain APIP.b 143 to 680 1 to 540       540/540
(100 %)
12 diff
(97.8 %id)
CK820027 Islets of Langerhans, Pancreas APIP.b 144 to 735 1 to 592       592/592
(100 %)
5 diff
(99.2 %id)
CD700566 normal nasopharynx APIP.b 146 to 583 33 to 470       438/470
(93 %)
7 diff
(98.6 %id)
BM771399 Ascites, stomach APIP.b 148 to 752 1 to 605       605/605
(100 %)
5 diff
(99.2 %id)
CB962752 Blood vessels - aorta, basilar and artery APIP.b 150 to 782 1 to 633       633/762
(83 %)
16 diff
(98.0 %id)
AV687164 hepatocellular carcinoma APIP.b 151 to 486 1 to 333       333/344
(96 %)
1 diff
(99.8 %id)
BG677609 skin, squamous cell carcinoma APIP.b 151 to 968 11 to 834 R7W G17V A18R Q19A D20G ...     824/842
(97 %)
30 diff
(96.5 %id)
CR599175 T cells (Jurkat cell line) Cot10-normalized APIP.b 152 to 1293 1 to 1142 exact     1142/1142
(100 %)
0 diff
(100 %id)
BG492823 lung, mucoepidermoid carcinoma APIP.b 154 to 1012 1 to 855 F74L V75L C76V D77I I78*     855/867
(98 %)
62 diff
(92.9 %id)
DA892872 skeletal muscle APIP.b 154 to 876 2 to 725   fully sequenced, capped   724/724
(100 %)
9 diff
(98.8 %id)
DA923130 small intestine APIP.b 154 to 722 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB036559 testis APIP.b 154 to 724 2 to 572   capped   571/571
(100 %)
4 diff
(99.3 %id)
AK225249 dermoid cancer APIP.b 158 to 1294 1 to 1137 R7W C76Y AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 1137/1137
(100 %)
4 diff
(99.7 %id)
BP226109   APIP.b 158 to 736 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
BM354048 Islets of Langerhans, Pancreas APIP.b 160 to 729 1 to 570       570/570
(100 %)
4 diff
(99.3 %id)
BU521864 leiomyosarcoma, uterus APIP.b 160 to 1007 1 to 856 V227G I241N V242C     856/865
(98 %)
12 diff
(98.7 %id)
BG402020 Kidney APIP.b 161 to 779 1 to 620       620/876
(70 %)
23 diff
(97.4 %id)
BI481392 Native Retinal Pigment Epithelium sheets, retina APIP.b 163 to 619 1 to 459       459/463
(99 %)
11 diff
(97.7 %id)
BG170223 hypernephroma, cell line, Kidney APIP.b 163 to 629 31 to 498       468/498
(93 %)
10 diff
(98.0 %id)
BF664982 brain, primitive neuroectoderm APIP.b 164 to 681 1 to 528       528/888
(59 %)
29 diff
(96.8 %id)
BF696596 brain, primitive neuroectoderm APIP.b 164 to 849 1 to 682       682/840
(81 %)
29 diff
(96.6 %id)
BF668266 brain, primitive neuroectoderm APIP.b 165 to 859 1 to 697       697/843
(82 %)
28 diff
(96.7 %id)
AA354043   APIP.b 168 to 494 1 to 330       330/330
(100 %)
5 diff
(98.5 %id)
AW957748   APIP.b 169 to 685 1 to 517       517/582
(88 %)
19 diff
(96.8 %id)
BM762397 myeloma APIP.b 170 to 826 1 to 657       657/657
(100 %)
4 diff
(99.4 %id)
BE958439 brain, primitive neuroectoderm APIP.b 172 to 821 1 to 639       639/639
(100 %)
16 diff
(97.5 %id)
BC009077 Eye, retinoblastoma APIP.b 176 to 1287 1 to 1112 exact available from MGC, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 1112/1112
(100 %)
0 diff
(100 %id)
CR598872 Neuroblastoma Cot 25-normalized APIP.b 178 to 1260 1 to 1083 exact     1083/1083
(100 %)
0 diff
(100 %id)
AL525537 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized APIP.b 178 to 708 1 to 531   fully sequenced,   531/531
(100 %)
0 diff
(100 %id)
BG722097 testis APIP.b 178 to 892 1 to 713       713/714
(99 %)
10 diff
(98.6 %id)
BX362087   APIP.b 180 to 1155 34 to 1009 I83X I144X D172B D175B R193X ...     976/1009
(96 %)
9 diff
(99.2 %id)
BC017594 Colon, adenocarcinoma APIP.b 181 to 1295 1 to 1115 R7W C76Y available from MGC, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 1115/1115
(100 %)
3 diff
(99.8 %id)
DB452644 testis APIP.b 184 to 654 1 to 471       471/471
(100 %)
3 diff
(99.4 %id)
BE960894 melanotic melanoma, high MDR, skin APIP.b 185 to 853 1 to 660       660/847
(77 %)
22 diff
(97.5 %id)
BF239037 bone marrow, from chronic myelogenous leukemia APIP.b 185 to 681 1 to 504       504/774
(65 %)
21 diff
(97.3 %id)
AA186403   APIP.b 186 to 762 17 to 593       577/593
(97 %)
18 diff
(97.0 %id)
BE292736 adenocarcinoma cell line, colon APIP.b 200 to 830 1 to 635       635/635
(100 %)
16 diff
(97.5 %id)
BE871032 adenocarcinoma, colon APIP.b 202 to 927 1 to 718       718/923
(77 %)
18 diff
(98.1 %id)
BU941397 mixed (pool of 40 RNAs) APIP.b 203 to 843 1 to 643       643/795
(80 %)
12 diff
(98.5 %id)
BG283097 adenocarcinoma, cell line, Prostate APIP.b 206 to 797 1 to 599       599/735
(81 %)
14 diff
(98.1 %id)
BE958057 brain, primitive neuroectoderm APIP.b 208 to 759 1 to 566       566/762
(74 %)
28 diff
(96.4 %id)
BF696343 brain, primitive neuroectoderm APIP.b 216 to 963 1 to 735 Q19R L31S C32L K33Q Q34T ...     735/838
(87 %)
35 diff
(95.9 %id)
TI_1948073948   APIP.b 216 to 950 857 to 122 S2F C4L D5*     736/1400
(52 %)
13 diff
(99.1 %id)
TI_1948084969   APIP.b 216 to 327 123 to 234       112/139
(80 %)
9 diff
(93.6 %id)
TI_1948085064   APIP.b 216 to 451 127 to 362   fully sequenced,   236/263
(89 %)
7 diff
(97.4 %id)
TI_1948237342   APIP.b 216 to 442 144 to 370       227/257
(88 %)
7 diff
(97.3 %id)
TI_1948237343   APIP.b 216 to 425 132 to 341       210/237
(88 %)
6 diff
(97.5 %id)
TI_1948238019   APIP.b 216 to 950 138 to 873 R7W C76Y V222R S223I M224I ...     736/1292
(56 %)
16 diff
(98.8 %id)
TI_1948238020   APIP.b 216 to 848 138 to 773       636/1355
(46 %)
36 diff
(97.4 %id)
CV025387 mixed APIP.b 217 to 876 1 to 657       657/660
(99 %)
4 diff
(99.4 %id)
CV027446 mixed APIP.b 217 to 874 1 to 660       660/660
(100 %)
8 diff
(98.8 %id)
EL733369 mixed APIP.b 217 to 853 1 to 636       636/636
(100 %)
6 diff
(99.1 %id)
TI_1948074127   APIP.b 217 to 950 858 to 122 S2L E8D D10*     737/1404
(52 %)
19 diff
(98.7 %id)
BM788265 Ascites, stomach APIP.b 220 to 889 1 to 669       669/669
(100 %)
6 diff
(99.2 %id)
EB388220 eye, optic nerve APIP.b 221 to 931 1 to 711       711/711
(100 %)
7 diff
(99.1 %id)
BF970850 adrenal cortex carcinoma, cell line, adrenal gland APIP.b 232 to 853 12 to 632       621/1461
(42 %)
15 diff
(99.0 %id)
CD521711 pooled APIP.b 238 to 999 1 to 767       767/770
(99 %)
16 diff
(98.0 %id)
CB268355 adipose APIP.b 257 to 538 1 to 279       279/341
(81 %)
9 diff
(97.4 %id)
BF672423 muscle (skeletal) APIP.b 260 to 1011 1 to 759       759/760
(99 %)
28 diff
(96.4 %id)
BE872211 adenocarcinoma, colon APIP.b 266 to 897 1 to 639       639/703
(90 %)
15 diff
(97.9 %id)
BG209009   APIP.b 375 to 1193 1 to 809       809/810
(99 %)
25 diff
(97.0 %id)
BG220494   APIP.b 375 to 1192 1 to 821       821/825
(99 %)
67 diff
(91.9 %id)
BG221456   APIP.b 375 to 1185 1 to 811       811/813
(99 %)
18 diff
(97.8 %id)
TI_1948085065   APIP.b 393 to 950 671 to 116   fully sequenced,   556/671
(82 %)
5 diff
(99.3 %id)
BM772592 Ascites, stomach APIP.b 523 to 1196 1 to 674       674/674
(100 %)
1 diff
(99.9 %id)
BI856922 breast, mammary adenocarcinoma, cell line APIP.b 531 to 1143 1 to 616       616/618
(99 %)
6 diff
(99.1 %id)
TI_57187702   APIP.b 531 to 1143 56 to 671       616/618
(99 %)
6 diff
(99.1 %id)
BF244631 brain, glioblastoma APIP.b 534 to 1145 1 to 605       605/1002
(60 %)
9 diff
(99.2 %id)
BM792357 Ascites, stomach APIP.b 538 to 1233 1 to 695       695/695
(100 %)
6 diff
(99.2 %id)
CR618871 Placenta Cot 25-normalized APIP.b 540 to 1294 1 to 755       755/755
(100 %)
0 diff
(100 %id)
AL551685.
matches multiple genes
placenta, Placenta Cot 25-normalized APIP.b 540 to 1294 1 to 755     also hits gene LOC100128086 755/755
(100 %)
1 diff
(99.9 %id)
BF673884 Prostate APIP.b 555 to 1288 1 to 722       722/883
(81 %)
22 diff
(97.6 %id)
BM743158 stomach APIP.b 558 to 1094 1 to 537       537/537
(100 %)
2 diff
(99.7 %id)
BG527580 lung, mucoepidermoid carcinoma APIP.b 561 to 1287 1 to 727   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 727/728
(99 %)
8 diff
(99.0 %id)
TI_149291023   APIP.b 584 to 1295 793 to 82   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 712/712
(100 %)
6 diff
(99.2 %id)
TI_149276599   APIP.b 604 to 1294 819 to 129       691/958
(72 %)
17 diff
(98.3 %id)
BM462959 melanotic melanoma, skin APIP.b 609 to 1295 41 to 727   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 687/727
(94 %)
6 diff
(99.2 %id)
BM973777 lung APIP.b 611 to 1295 703 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 685/685
(100 %)
1 diff
(99.9 %id)
BF132865 lung, mucoepidermoid carcinoma APIP.b 613 to 1247 1 to 624       624/768
(81 %)
28 diff
(96.4 %id)
BX352317   APIP.b 629 to 1293 670 to 1       668/774
(86 %)
12 diff
(98.5 %id)
BM759020 Ascites, stomach APIP.b 636 to 1177 1 to 542       542/542
(100 %)
0 diff
(100 %id)
CA427313 Cell Line, Chondrosarcoma APIP.b 639 to 1294 674 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 656/656
(100 %)
0 diff
(100 %id)
TI_149280387   APIP.b 641 to 1294 778 to 126   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 653/653
(100 %)
11 diff
(98.4 %id)
BG499594 adenocarcinoma, Prostate APIP.b 643 to 1294 1 to 653       653/727
(89 %)
4 diff
(99.5 %id)
AL525491 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized APIP.b 647 to 1260 614 to 1   fully sequenced,   614/614
(100 %)
2 diff
(99.7 %id)
AL580710 T cells from T cell leukemia APIP.b 647 to 1326 681 to 5   fully sequenced,   677/681
(99 %)
1 diff
(99.9 %id)
TI_149283492   APIP.b 651 to 1294 725 to 82   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 644/719
(89 %)
1 diff
(99.9 %id)
BU679177 lung, Primary Lung Epithelial Cells APIP.b 673 to 1294 633 to 12   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 622/632
(98 %)
10 diff
(98.5 %id)
AW051333 pooled APIP.b 685 to 1294 613 to 4       610/613
(99 %)
0 diff
(100 %id)
BE677532 dorsal root ganglia APIP.b 685 to 1295 627 to 17   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 611/611
(100 %)
7 diff
(98.9 %id)
AA554795 colon, tumor APIP.b 697 to 1261 564 to 1       564/564
(100 %)
5 diff
(99.2 %id)
BM314315 Pancreas, Purified pancreatic islet APIP.b 700 to 1295 606 to 9       598/606
(98 %)
2 diff
(99.7 %id)
AV703578 adrenal gland APIP.b 702 to 1295 1 to 594   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 594/594
(100 %)
3 diff
(99.5 %id)
BM826051 Ascites, stomach APIP.b 706 to 1101 1 to 398       398/398
(100 %)
3 diff
(99.3 %id)
CK820026 Islets of Langerhans, Pancreas APIP.b 718 to 1294 584 to 8       577/584
(98 %)
0 diff
(100 %id)
TI_1948084970   APIP.b 719 to 950 349 to 119       231/253
(91 %)
1 diff
(99.7 %id)
TI_149307987   APIP.b 723 to 1294 687 to 116   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 572/952
(60 %)
1 diff
(99.9 %id)
BU686878 lung, Primary Lung Epithelial Cells APIP.b 723 to 1294 590 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 572/579
(98 %)
1 diff
(99.9 %id)
AA622259 Prostate, prostate tumor APIP.b 724 to 1293 570 to 1       570/573
(99 %)
11 diff
(98.1 %id)
AW615161 Kidney APIP.b 724 to 1294 575 to 5       571/575
(99 %)
2 diff
(99.7 %id)
BM273116 Islets of Langerhans, Pancreas APIP.b 724 to 1294 578 to 8       571/578
(98 %)
0 diff
(100 %id)
BM142421 Islets of Langerhans, Pancreas APIP.b 724 to 1294 578 to 8       571/578
(98 %)
0 diff
(100 %id)
AW872891 squamous cell carcinoma, tongue APIP.b 728 to 1294 577 to 11   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 567/568
(99 %)
2 diff
(99.7 %id)
BX103281 senescent fibroblast APIP.b 733 to 1321 1 to 590       590/597
(98 %)
2 diff
(99.7 %id)
AF088034   APIP.b 733 to 1364 1 to 632   tiling clone, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 632/632
(100 %)
0 diff
(100 %id)
W42832 senescent fibroblast APIP.b 733 to 1192 1 to 460       460/460
(100 %)
0 diff
(100 %id)
TI_149304669   APIP.b 739 to 1294 655 to 100   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 556/954
(58 %)
2 diff
(99.8 %id)
BM971285 lung, Primary Lung Epithelial Cells APIP.b 739 to 1294 574 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 556/560
(99 %)
2 diff
(99.7 %id)
BF195141 brain, glioblastoma (pooled) APIP.b 754 to 1287 534 to 1       534/534
(100 %)
0 diff
(100 %id)
AA991784   APIP.b 758 to 1294 540 to 5       536/541
(99 %)
8 diff
(98.6 %id)
TI_149275831   APIP.b 759 to 1294 598 to 63   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 536/976
(54 %)
4 diff
(99.6 %id)
BU676861 lung, Primary Lung Epithelial Cells APIP.b 759 to 1294 554 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 536/548
(97 %)
4 diff
(99.3 %id)
AW025872 thymus, pooled APIP.b 768 to 1294 529 to 4       526/529
(99 %)
1 diff
(99.9 %id)
AA181808   APIP.b 776 to 1291 523 to 4       520/524
(99 %)
11 diff
(98.0 %id)
BM824306 Ascites, stomach APIP.b 776 to 1274 1 to 500       500/500
(100 %)
2 diff
(99.6 %id)
BU677287 lung, Primary Lung Epithelial Cells APIP.b 789 to 1285 524 to 28   AAA   497/506
(98 %)
0 diff
(100 %id)
BP393142 pancreatic islet APIP.b 795 to 1294 1 to 500     Submitted on the opposite strand 500/500
(100 %)
1 diff
(99.8 %id)
TI_157605103   APIP.b 806 to 1294 599 to 111   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 489/492
(99 %)
2 diff
(99.6 %id)
CA941960 Pancreas, Purified pancreatic islet APIP.b 811 to 1225 107 to 523       417/523
(79 %)
7 diff
(98.7 %id)
BF241266 bone marrow, from acute myelogenous leukemia APIP.b 824 to 1293 1 to 469       469/778
(60 %)
10 diff
(98.8 %id)
BG185011   APIP.b 840 to 1287 40 to 499   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 460/499
(92 %)
10 diff
(98.0 %id)
BG193920   APIP.b 840 to 1293 1 to 451   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 451/452
(99 %)
11 diff
(97.6 %id)
BG210951   APIP.b 840 to 1294 1 to 452   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 452/452
(100 %)
7 diff
(98.5 %id)
BG217854   APIP.b 840 to 1299 1 to 461   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 461/462
(99 %)
6 diff
(98.8 %id)
AW968004   APIP.b 843 to 1295 453 to 1     Submitted on the opposite strand 453/605
(74 %)
2 diff
(99.7 %id)
AI684307 serous papillary carcinoma, high grade, 2pooled tumors, uterus APIP.b 843 to 1294 452 to 1       452/452
(100 %)
0 diff
(100 %id)
DB354055   APIP.b 843 to 1295 454 to 1   fully sequenced,   454/454
(100 %)
3 diff
(99.4 %id)
DB548734 hippocampus APIP.b 844 to 1295 1 to 452     Submitted on the opposite strand 452/452
(100 %)
0 diff
(100 %id)
DB330797 skeletal muscle APIP.b 845 to 1294 448 to 1   fully sequenced,   448/448
(100 %)
2 diff
(99.6 %id)
DB548717 hippocampus APIP.b 846 to 1295 1 to 451     Submitted on the opposite strand 451/451
(100 %)
1 diff
(99.8 %id)
AI634803 Kidney APIP.b 851 to 1295 447 to 3       445/447
(99 %)
0 diff
(100 %id)
BG206784   APIP.b 853 to 1295 22 to 463   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 442/465
(95 %)
5 diff
(99.0 %id)
CF529641 placenta APIP.b 854 to 1294 460 to 20   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 441/441
(100 %)
0 diff
(100 %id)
AA251829 germinal center B cell APIP.b 863 to 1295 433 to 1       433/433
(100 %)
1 diff
(99.8 %id)
BG204620   APIP.b 866 to 1164 31 to 325   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 295/326
(90 %)
5 diff
(98.5 %id)
BG221317   APIP.b 866 to 1293 35 to 460   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 426/461
(92 %)
6 diff
(98.7 %id)
AA262291 germinal center B cell APIP.b 871 to 1287 1 to 415       415/415
(100 %)
2 diff
(99.6 %id)
BG205163   APIP.b 888 to 1144 1 to 255       255/255
(100 %)
3 diff
(98.9 %id)
AA565240 adrenal adenoma, adrenal gland APIP.b 894 to 1293 400 to 1       400/400
(100 %)
0 diff
(100 %id)
BX349108   APIP.b 895 to 1294 1 to 397       397/397
(100 %)
8 diff
(98.0 %id)
BY796453 eye APIP.b 895 to 1294 1 to 400       400/401
(99 %)
1 diff
(99.8 %id)
AI309202 2 pooled tumors (clear cell type), Kidney APIP.b 913 to 1298 398 to 13   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 386/386
(100 %)
0 diff
(100 %id)
D63093   APIP.b 941 to 1290 1 to 350       350/350
(100 %)
10 diff
(97.2 %id)
AW169519 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus APIP.b 947 to 1293 350 to 4       347/350
(99 %)
0 diff
(100 %id)
AI376261   APIP.b 972 to 1294 341 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 323/323
(100 %)
5 diff
(98.5 %id)
BM818807 stomach APIP.b 975 to 1165 1 to 191   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 191/191
(100 %)
0 diff
(100 %id)
CB105154 Liver APIP.b 992 to 1293 1 to 302       302/307
(98 %)
1 diff
(99.7 %id)
W42742 senescent fibroblast APIP.b 995 to 1364 372 to 1       372/372
(100 %)
2 diff
(99.5 %id)
FN126717 breast carcinoma APIP.b 1284 to 1363 79 to 2     Submitted on the opposite strand 78/79
(98 %)
0 diff
(100 %id)
DB486113 hypothalamus APIP.c 1 to 408 3 to 410   tiling clone,   410/410
(100 %)
3 diff
(99.3 %id)
BF032433 adenocarcinoma, ovary APIP.c 15 to 727 1 to 701       701/787
(89 %)
15 diff
(98.1 %id)
CF128411 Chondrosarcoma Lung Metastasis cell lines, lung APIP.c 31 to 719 1 to 688   tiling clone,   688/688
(100 %)
6 diff
(99.2 %id)
TI_154194282   APIP.c 31 to 1033 51 to 1039   tiling clone,   989/1066
(92 %)
46 diff
(95.7 %id)
BE902515 choriocarcinoma, placenta APIP.c 47 to 784 1 to 755   tiling clone, available from MGC,   638/760
(83 %)
90 diff
(88.2 %id)
BG701550 brain, hippocampus APIP.c 56 to 880 1 to 827   tiling clone,   827/827
(100 %)
10 diff
(98.8 %id)
DB479990 hippocampus APIP.c 61 to 544 1 to 502       363/502
(72 %)
13 diff
(97.5 %id)
DB480006 hippocampus APIP.c 61 to 565 1 to 505       505/505
(100 %)
4 diff
(99.3 %id)
R58310   APIP.c 73 to 367 1 to 291   tiling clone,   293/292
(100 %)
10 diff
(96.6 %id)
BG613892 embryonal carcinoma, testis APIP.c 91 to 911 1 to 826   tiling clone,   826/826
(100 %)
31 diff
(96.3 %id)
BF343823 brain, glioblastoma with EGFR amplification APIP.d 1 to 692 37 to 726   tiling clone,   690/1080
(63 %)
19 diff
(98.3 %id)
W20478 lung APIP.d 190 to 504 1 to 317       317/327
(96 %)
3 diff
(99.1 %id)
AK226157 Spleen APIP.d 201 to 4766 1 to 4565 exact tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 4565/4565
(100 %)
10 diff
(99.8 %id)
BF207719 bladder, carcinoma, cell line APIP.e 1 to 719 1 to 712 D20N F74L V75F C76V D77I ... tiling clone,   712/714
(99 %)
23 diff
(96.8 %id)
DA122928 cerebellum APIP.f-u 1 to 558 2 to 560   tiling clone, capped   559/559
(100 %)
6 diff
(99.0 %id)
T18884   APIP.f-u 26 to 421 395 to 1     Submitted on the opposite strand 395/405
(97 %)
6 diff
(98.6 %id)
AV729725 hypothalamus APIP.f-u 48 to 454 401 to 1   tiling clone, Submitted on the opposite strand 401/418
(95 %)
12 diff
(97.2 %id)
DB131778 thymus APIP.f-u 115 to 660 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DA413524 thalamus APIP.f-u 390 to 953 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
CN309059 embryonic stem cells, cell lines H1, H7, andH9 APIP.f-u 401 to 1133 1 to 735   tiling clone,   735/735
(100 %)
2 diff
(99.8 %id)
DA349903 substantia nigra APIP.f-u 530 to 1080 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA216107 brain APIP.f-u 635 to 1187 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA100198 cerebellum APIP.f-u 732 to 1294 2 to 564 exact capped   563/563
(100 %)
1 diff
(99.9 %id)
AF131812   APIP.f-u 778 to 2835 1 to 2058 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 2058/2058
(100 %)
0 diff
(100 %id)
F12642 brain, total brain APIP.f-u 778 to 1140 1 to 363       363/363
(100 %)
0 diff
(100 %id)
T80583 whole brain APIP.f-u 778 to 1154 1 to 383       383/450
(85 %)
11 diff
(97.6 %id)
T80546 whole brain APIP.f-u 778 to 1224 1 to 457       457/457
(100 %)
14 diff
(97.0 %id)
T74532 whole brain APIP.f-u 815 to 1233 1 to 429 I43D S44F T45H H46S I47H ...     429/440
(97 %)
17 diff
(96.2 %id)
BQ941077 sciatic nerve APIP.f-u 1329 to 2173 1 to 865       865/956
(90 %)
25 diff
(97.4 %id)
BG696223 skin APIP.f-u 1637 to 2278 1 to 642       642/642
(100 %)
1 diff
(99.9 %id)
BX097951 whole brain APIP.f-u 2352 to 2849 499 to 1   tiling clone,   499/500
(99 %)
3 diff
(99.4 %id)
R38935 whole brain APIP.f-u 2511 to 2837 335 to 7   tiling clone,   329/336
(97 %)
0 diff
(100 %id)
F10257 brain, total brain APIP.f-u 2516 to 2835 320 to 1       320/320
(100 %)
0 diff
(100 %id)
R39008 whole brain APIP.f-u 2521 to 2837 331 to 7       325/341
(95 %)
0 diff
(100 %id)
H19211 whole brain APIP.f-u 2553 to 2843 296 to 1       296/296
(100 %)
10 diff
(96.7 %id)
CA392456 eye, RPE/choroid APIP.g 1 to 651 1 to 649   tiling clone, to resequence, Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 649/649
(100 %)
2 diff
(99.7 %id)
AW630410 2 pooled high-grade transitional celltumors, genitourinary tract APIP.g 618 to 841 10 to 233   tiling clone,   224/233
(96 %)
6 diff
(97.5 %id)
BM721620 eye, fetal eye APIP.g 797 to 1211 1 to 415 exact tiling clone, Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 415/415
(100 %)
5 diff
(98.8 %id)
CA392455 eye, RPE/choroid APIP.g 2134 to 2633 522 to 23   tiling clone, to resequence, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 500/500
(100 %)
0 diff
(100 %id)
AW613673 2 pooled high-grade transitional celltumors, genitourinary tract APIP.g 2218 to 2634 425 to 9       417/425
(98 %)
0 diff
(100 %id)
BM677228 eye, fetal eye APIP.g 2258 to 2634 395 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 377/377
(100 %)
0 diff
(100 %id)
DA186070 amygdala APIP.h-u 1 to 551 2 to 554   tiling clone, to resequence, capped   553/553
(100 %)
2 diff
(99.7 %id)
AA020907 eye, retina APIP.h-u 615 to 1250 1 to 640 V13S L15S P16S F17L N18Q ... tiling clone,   640/640
(100 %)
19 diff
(97.1 %id)
AA018502 eye, retina APIP.h-u 616 to 1039 1 to 424   tiling clone,   424/424
(100 %)
0 diff
(100 %id)
BX102119 eye, retina APIP.h-u 617 to 1049 1 to 433       433/434
(99 %)
3 diff
(99.4 %id)
DB303156 amygdala APIP.h-u 1680 to 2226 548 to 1   tiling clone, to resequence,   548/548
(100 %)
1 diff
(99.9 %id)
AI346641 adenocarcinoma, colon APIP.h-u 1749 to 2205 457 to 1       457/457
(100 %)
0 diff
(100 %id)
AA018456 eye, retina APIP.h-u 1801 to 2227 433 to 1       433/433
(100 %)
6 diff
(98.7 %id)
DB518083 testis APIP.h-u 1819 to 2226 1 to 408   AAA Submitted on the opposite strand 408/408
(100 %)
1 diff
(99.8 %id)
AW118973 pooled APIP.h-u 1872 to 2224 355 to 3       353/355
(99 %)
0 diff
(100 %id)
AA020838 eye, retina APIP.h-u 1893 to 2226 339 to 1       339/339
(100 %)
11 diff
(96.8 %id)
AW515988 lymph node, lymphoma, follicular mixed small and largecell APIP.h-u 1921 to 2228 311 to 4   tiling clone,   308/311
(99 %)
0 diff
(100 %id)
DB147040 thymus APIP.i 1 to 582 2 to 584 exact tiling clone, to resequence, capped   583/583
(100 %)
3 diff
(99.5 %id)
DB345808 thymus APIP.i 1259 to 1798 540 to 1   tiling clone, to resequence,   540/540
(100 %)
2 diff
(99.7 %id)
DC418429 trachea APIP.j 1 to 567 1 to 568 T43Y R44K tiling clone,   568/568
(100 %)
3 diff
(99.5 %id)
DA825109 pericardium APIP.k-u 1 to 455 2 to 456 exact tiling clone, capped   455/455
(100 %)
1 diff
(99.8 %id)
BX375176 Neuroblastoma Cot 25-normalized Gene APIP, variant not shown         Suspected internal deletion, this clone was ignored    
AV684350 hepatocellular carcinoma Gene APIP, variant not shown         Suspected internal deletion, this clone was ignored    
AV696037 hepatocellular carcinoma Gene APIP, variant not shown         Suspected internal deletion, this clone was ignored    
AV713375   Gene APIP, variant not shown         This clone was ignored    
AV657613 corresponding non cancerous liver tissue Gene APIP, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
DB327926 pericardium Gene APIP, variant not shown         This clone was ignored    
AV728301 hypothalamus Gene APIP, variant not shown         Suspected internal deletion, this clone was ignored    
DA232754 brain Gene APIP, variant not shown       capped This clone was ignored    
DB306142 brain Gene APIP, variant not shown         This clone was ignored    
DA246508 brain Gene APIP, variant not shown       capped This clone was ignored    
BE735413 adenocarcinoma, Pancreas Gene APIP, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h-u, .i, .j, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI