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Gene MMP23BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
61 supporting clones for gene MMP23B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA938459 Spleen .a 1 to 593 2 to 593   tiling clone, capped   592/592
(100 %)
3 diff
(99.5 %id)
BP421383 small intestine .a 277 to 478 1 to 203     Submitted on the opposite strand 203/203
(100 %)
2 diff
(99.1 %id)
BI823645 pooled brain, lung, testis .a 414 to 1110 1 to 696       696/697
(99 %)
4 diff
(99.5 %id)
TI_57200750   .a 414 to 1110 62 to 757       696/758
(91 %)
9 diff
(98.9 %id)
BM547234 ovary (pool of 3) .a 462 to 1357 1 to 904   tiling clone,   902/1109
(81 %)
23 diff
(98.0 %id)
BX096766.
matches multiple genes
lung .a 1311 to 1795 1 to 485   tiling clone, also hits gene MMP23A 485/485
(100 %)
0 diff
(100 %id)
CB241847.
matches multiple genes
Human Lung Epithelial cells, lung .a 1544 to 2076 554 to 19   tiling clone, AAA also hits gene MMP23A 536/823
(65 %)
7 diff
(99.2 %id)
AJ005256   .b 1 to 1240 1 to 1240 exact tiling clone,   1240/1246
(99 %)
1 diff
(100.0 %id)
NM_006983.1   .b 1 to 1246 1 to 1246 exact RefSeq,   1246/1246
(100 %)
6 diff
(99.6 %id)
TI_57168109   .b 8 to 799 63 to 862       800/894
(89 %)
24 diff
(97.4 %id)
BC025719 Pancreas, Spleen, adult pooled .b 10 to 1239 1 to 1230 exact tiling clone, available from MGC, AAA   1230/1230
(100 %)
0 diff
(100 %id)
BI834812 pooled pancreas and spleen .b 10 to 799 1 to 798       798/830
(96 %)
16 diff
(98.1 %id)
AB010961 uterus .b 12 to 1223 1 to 1212 exact     1212/1212
(100 %)
1 diff
(100.0 %id)
AF056200   .b 24 to 1239 1 to 1216 F91L AAA   1216/1216
(100 %)
5 diff
(99.6 %id)
BX416915.
matches multiple genes
placenta .b 192 to 829 1 to 638   fully sequenced, also hits gene MMP23A 638/638
(100 %)
6 diff
(99.1 %id)
AL549279.
matches multiple genes
placenta, Placenta Cot 25-normalized .b 192 to 664 1 to 474   tiling clone, fully sequenced, also hits gene MMP23A 474/474
(100 %)
1 diff
(99.8 %id)
CR742251.
matches multiple genes
Prostate .b 399 to 885 1 to 487   tiling clone, also hits gene MMP23A 487/487
(100 %)
0 diff
(100 %id)
BM717784.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 502 to 940 1 to 439   fully sequenced, also hits gene MMP23A 439/439
(100 %)
1 diff
(99.8 %id)
TI_45236161.
matches multiple genes
  .b 528 to 1242 61 to 779   fully sequenced, also hits gene MMP23A 719/779
(92 %)
25 diff
(96.8 %id)
BI517766.
matches multiple genes
pooled colon, kidney, stomach .b 536 to 1242 1 to 711   fully sequenced, also hits gene MMP23A 711/711
(100 %)
19 diff
(97.4 %id)
BM544158.
matches multiple genes
ovary (pool of 3) .b 551 to 1240 13 to 702   tiling clone, also hits gene MMP23A 690/703
(98 %)
6 diff
(99.2 %id)
BM930943.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 580 to 1239 1 to 660     also hits gene MMP23A 660/660
(100 %)
1 diff
(99.9 %id)
AF086353.
matches multiple genes
  .b 586 to 1239 1 to 654   AAA also hits gene MMP23A 654/654
(100 %)
0 diff
(100 %id)
AL573560.
matches multiple genes
placenta, Placenta Cot 25-normalized .b 603 to 1201 599 to 1   fully sequenced, also hits gene MMP23A 536/536
(100 %)
40 diff
(92.6 %id)
CB048617.
matches multiple genes
Prostate .b 633 to 1134 1 to 502     also hits gene MMP23A 502/502
(100 %)
3 diff
(99.5 %id)
DW009983.
matches multiple genes
pooled .b 648 to 1082 434 to 1     also hits gene MMP23A 434/434
(100 %)
1 diff
(99.8 %id)
TI_1065986842.
matches multiple genes
  .b 663 to 1139 6 to 482     also hits gene MMP23A 477/593
(80 %)
15 diff
(97.5 %id)
DW009982.
matches multiple genes
pooled .b 682 to 1124 1 to 443     also hits gene MMP23A 443/443
(100 %)
0 diff
(100 %id)
AW473284.
matches multiple genes
serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 715 to 1239 540 to 15   AAA also hits gene MMP23A 526/527
(99 %)
20 diff
(96.3 %id)
AI347985.
matches multiple genes
adenocarcinoma, colon .b 763 to 1240 484 to 7     also hits gene MMP23A 478/484
(98 %)
0 diff
(100 %id)
AA151544.
matches multiple genes
uterus .b 765 to 1218 1 to 461   fully sequenced, AAA also hits gene MMP23A 461/461
(100 %)
25 diff
(94.6 %id)
BX434034.
matches multiple genes
placenta .b 768 to 1237 469 to 1   fully sequenced, also hits gene MMP23A 469/469
(100 %)
5 diff
(99.0 %id)
AW072298.
matches multiple genes
anaplastic oligodendroglioma, brain .b 802 to 1239 446 to 1     also hits gene MMP23A 442/498
(88 %)
20 diff
(96.0 %id)
AI127871.
matches multiple genes
uterus .b 808 to 1239 458 to 27   AAA also hits gene MMP23A 432/432
(100 %)
31 diff
(92.9 %id)
BI518194.
matches multiple genes
pooled colon, kidney, stomach .b 833 to 1190 357 to 1   fully sequenced, also hits gene MMP23A 357/357
(100 %)
7 diff
(98.1 %id)
TI_45236162.
matches multiple genes
  .b 833 to 1190 357 to 1   fully sequenced, also hits gene MMP23A 357/357
(100 %)
7 diff
(98.1 %id)
BM679806.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 879 to 1239 379 to 19   fully sequenced, AAA also hits gene MMP23A 361/361
(100 %)
0 diff
(100 %id)
AA934867.
matches multiple genes
pooled .b 881 to 1240 365 to 6     also hits gene MMP23A 360/365
(98 %)
5 diff
(98.7 %id)
AI284983.
matches multiple genes
adenocarcinoma, colon .b 910 to 1240 338 to 7     also hits gene MMP23A 332/338
(98 %)
1 diff
(99.8 %id)
BE466311.
matches multiple genes
Kidney .b 911 to 1206 296 to 1     also hits gene MMP23A 296/364
(81 %)
7 diff
(98.1 %id)
AJ707857.
matches multiple genes
heart .b 912 to 1239 1 to 327   AAA also hits gene MMP23A 327/327
(100 %)
1 diff
(99.7 %id)
AA581775.
matches multiple genes
Kidney, kidney tumor .b 931 to 1217 288 to 3     Submitted on the opposite strand, also hits gene MMP23A 286/288
(99 %)
1 diff
(99.7 %id)
W73023.
matches multiple genes
heart .b 950 to 1239 291 to 1     also hits gene MMP23A 291/292
(99 %)
7 diff
(97.7 %id)
AA626131.
matches multiple genes
  .b 977 to 1239 286 to 24   AAA also hits gene MMP23A 263/263
(100 %)
4 diff
(98.5 %id)
AA151428.
matches multiple genes
uterus .b 983 to 1239 258 to 1   fully sequenced, also hits gene MMP23A 258/258
(100 %)
2 diff
(99.3 %id)
AB010962 uterus .c 1 to 1308 13 to 1320 exact tiling clone, AAA   1308/1320
(99 %)
6 diff
(99.6 %id)
TI_154193506.
matches multiple genes
  .c 294 to 977 50 to 733     also hits gene MMP23A 684/990
(69 %)
28 diff
(97.2 %id)
CF127824.
matches multiple genes
Chondrosarcoma Lung Metastasis cell lines, lung .c 297 to 885 3 to 591   tiling clone, also hits gene MMP23A 589/591
(99 %)
10 diff
(98.4 %id)
W76631.
matches multiple genes
heart .c 653 to 1067 1 to 419     also hits gene MMP23A 419/419
(100 %)
13 diff
(96.9 %id)
BX100332.
matches multiple genes
heart .c 656 to 900 1 to 245     also hits gene MMP23A 245/245
(100 %)
0 diff
(100 %id)
CR978396.
matches multiple genes
T-Lymphocytes .d 1 to 545 1 to 546   tiling clone, also hits gene MMP23A 546/546
(100 %)
1 diff
(99.9 %id)
TI_57176041.
matches multiple genes
  .d 502 to 1135 54 to 686   tiling clone, also hits gene MMP23A 633/686
(92 %)
8 diff
(98.9 %id)
BI829304.
matches multiple genes
brain, medulla .d 510 to 1135 1 to 626   tiling clone, also hits gene MMP23A 626/626
(100 %)
2 diff
(99.7 %id)
DB454549.
matches multiple genes
testis .e 1 to 461 3 to 463   tiling clone, also hits gene MMP23A 463/463
(100 %)
3 diff
(99.4 %id)
AF057061.
matches multiple genes
  .e 290 to 1088 1 to 797   tiling clone, also hits gene MMP23A 797/797
(100 %)
1 diff
(99.9 %id)
CR608527.
matches multiple genes
placenta .f 1 to 903 4 to 906 exact tiling clone, also hits gene MMP23A 906/906
(100 %)
0 diff
(100 %id)
NR_002946.1.
matches multiple genes
  .f 1 to 903 4 to 906 exact RefSeq, also hits gene MMP23A 906/906
(100 %)
0 diff
(100 %id)
AF057062.
matches multiple genes
  .g 1 to 750 1 to 749 R124V A125L H127T A128L D130I ... tiling clone, also hits gene MMP23A 749/749
(100 %)
2 diff
(99.8 %id)
AK297700 lung .h 1 to 1531 2 to 1532 exact tiling clone,   1532/1532
(100 %)
3 diff
(99.9 %id)
DA541164 lung .h 1 to 523 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
BG015198.
matches multiple genes
placenta_normal .h 819 to 938 120 to 1     also hits gene MMP23A 120/120
(100 %)
0 diff
(100 %id)
BQ575307.
matches multiple genes
Chondrosarcoma Grade II, Left Pelvis .i 1 to 639 657 to 19 exact tiling clone, AAA also hits gene MMP23A 639/648
(98 %)
0 diff
(100 %id)
BM808401 ovary (pool of 3) .j 1 to 531 70 to 605 P3I R151A E152G T153D R154A ... tiling clone,   536/1319
(40 %)
17 diff
(98.8 %id)
BM796874.
matches multiple genes
Ascites, stomach .k-u 1 to 393 1 to 393 T10I tiling clone, also hits gene MMP23A 393/393
(100 %)
1 diff
(99.8 %id)
DB519972.
matches multiple genes
testis .k-u 257 to 693 1 to 437   tiling clone, Submitted on the opposite strand, also hits gene MMP23A 437/437
(100 %)
2 diff
(99.6 %id)
AI815030.
matches multiple genes
adenocarcinoma, Pancreas .k-u 280 to 698 423 to 2   tiling clone, also hits gene MMP23A 422/423
(99 %)
0 diff
(100 %id)
BG472994.
matches multiple genes
eye, retinoblastoma Gene MMP23A, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene MMP23A    
BG472994.
matches multiple genes
eye, retinoblastoma Gene MMP23B, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene MMP23A    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC