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Gene MMP10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
91 supporting clones for gene MMP10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CF596568 ovary .a 1 to 651 8 to 662       662/822
(80 %)
14 diff
(98.3 %id)
AK222601 coronary artery .a 1 to 1744 4 to 1747 R53K tiling clone, AAA   1747/1747
(100 %)
4 diff
(99.8 %id)
AK313960 esophagus, tumor tissue .a 1 to 1465 4 to 1468 exact tiling clone,   1468/1468
(100 %)
0 diff
(100 %id)
AU098458   .a 1 to 297 4 to 300       300/300
(100 %)
1 diff
(99.7 %id)
AU102646   .a 1 to 47 4 to 50       50/50
(100 %)
0 diff
(100 %id)
BP205642 coronary artery .a 1 to 579 4 to 582       582/582
(100 %)
1 diff
(99.9 %id)
NM_002425.2   .a 1 to 1755 4 to 1758 exact RefSeq, AAA   1758/1758
(100 %)
0 diff
(100 %id)
BP350564   .a 1 to 580 4 to 583       583/583
(100 %)
0 diff
(100 %id)
BP350592   .a 1 to 578 4 to 581       581/581
(100 %)
0 diff
(100 %id)
BP351055   .a 1 to 578 4 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP351299   .a 1 to 579 4 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP351322   .a 1 to 579 4 to 582       582/582
(100 %)
0 diff
(100 %id)
BP351427   .a 1 to 579 4 to 582       582/582
(100 %)
0 diff
(100 %id)
BP351598   .a 1 to 621 4 to 624       624/624
(100 %)
1 diff
(99.9 %id)
BP351604   .a 1 to 605 4 to 608       608/608
(100 %)
0 diff
(100 %id)
BP351724   .a 1 to 584 4 to 587       587/587
(100 %)
0 diff
(100 %id)
BP351984   .a 1 to 580 4 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP352068   .a 1 to 578 4 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BP352259   .a 1 to 580 4 to 583       583/583
(100 %)
0 diff
(100 %id)
BP352531   .a 1 to 579 4 to 582       582/582
(100 %)
0 diff
(100 %id)
BP352568   .a 1 to 600 4 to 603       603/603
(100 %)
0 diff
(100 %id)
BP352575   .a 1 to 584 4 to 588       588/588
(100 %)
3 diff
(99.5 %id)
BP352805   .a 1 to 580 4 to 584       584/584
(100 %)
3 diff
(99.5 %id)
DA433464 tongue, tumor tissue .a 1 to 723 4 to 727   capped   726/765
(94 %)
5 diff
(99.4 %id)
DA583288 lung .a 1 to 548 4 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA698391   .a 1 to 516 4 to 519   capped   518/518
(100 %)
2 diff
(99.7 %id)
DA701414   .a 1 to 551 4 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DA881601   .a 1 to 540 4 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA889650   .a 1 to 559 4 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BP350779   .a 1 to 581 3 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB011979 esophageal, tumor tissue .a 1 to 556 4 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DB012177 esophageal, tumor tissue .a 1 to 563 4 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB014373 esophageal, tumor tissue .a 1 to 524 4 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB015059 esophageal, tumor tissue .a 1 to 455 4 to 460   capped   459/459
(100 %)
2 diff
(99.6 %id)
DB015291 esophageal, tumor tissue .a 1 to 498 4 to 501   capped   500/500
(100 %)
0 diff
(100 %id)
DB015481 esophageal, tumor tissue .a 1 to 570 4 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB016718 esophageal, tumor tissue .a 1 to 563 4 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB017245 esophageal, tumor tissue .a 1 to 562 4 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB185247 liver, tumor tissue .a 1 to 577 4 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BP351009   .a 1 to 582 2 to 581       581/581
(100 %)
9 diff
(98.5 %id)
DB015409 esophageal, tumor tissue .a 1 to 562 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BM555652 duodenal adenocarcinoma, cell line, small intestine .a 9 to 822 1 to 825       825/1111
(74 %)
14 diff
(98.8 %id)
BC002591 Ovary, adenocarcinoma .a 11 to 1755 1 to 1745 exact tiling clone, available from MGC, AAA   1745/1745
(100 %)
0 diff
(100 %id)
BX474648   .a 12 to 523 1 to 512       512/512
(100 %)
4 diff
(99.3 %id)
X07820   .a 13 to 1755 1 to 1743 exact     1743/1743
(100 %)
1 diff
(100.0 %id)
BE746778 adenocarcinoma cell line, ovary .a 29 to 716 1 to 679       679/857
(79 %)
14 diff
(98.4 %id)
BE271570 adenocarcinoma cell line, ovary .a 31 to 822 1 to 795       795/856
(92 %)
10 diff
(98.9 %id)
BT007442   .a 35 to 1465 1 to 1431 exact     1431/1431
(100 %)
0 diff
(100 %id)
BE740153 adenocarcinoma cell line, ovary .a 124 to 962 1 to 836       836/1085
(77 %)
13 diff
(98.9 %id)
BP265301 thyroid .a 184 to 767 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BF349318 head_neck .a 343 to 759 421 to 3       419/421
(99 %)
10 diff
(97.7 %id)
T27816 colon, endothelial .a 403 to 672 1 to 270       270/270
(100 %)
1 diff
(99.7 %id)
AW949366   .a 404 to 916 1 to 513       513/513
(100 %)
0 diff
(100 %id)
FN126097 breast carcinoma .a 566 to 657 1 to 88       88/88
(100 %)
4 diff
(95.5 %id)
FN074390 breast carcinoma .a 728 to 819 92 to 1     Submitted on the opposite strand 92/92
(100 %)
0 diff
(100 %id)
BF036794 adenocarcinoma, ovary .a 734 to 1226 1 to 511       509/513
(99 %)
29 diff
(94.4 %id)
BF877916 lung_tumor .a 871 to 1453 11 to 594       578/596
(96 %)
21 diff
(96.5 %id)
BF877941 lung_tumor .a 876 to 1422 39 to 584       546/584
(93 %)
11 diff
(98.2 %id)
BQ332909 lung_tumor .a 877 to 1435 23 to 576       554/576
(96 %)
12 diff
(98.0 %id)
BF034537 adenocarcinoma, ovary .a 885 to 1641 1 to 752       752/944
(79 %)
13 diff
(98.7 %id)
TI_149270871   .a 914 to 1755 919 to 90   AAA   828/1024
(80 %)
22 diff
(97.9 %id)
BM480245 duodenal adenocarcinoma, cell line, small intestine .a 923 to 1742 22 to 842       821/848
(96 %)
14 diff
(98.4 %id)
BX281044 duodenal adenocarcinoma, cell line, small intestine .a 930 to 1388 1 to 459       459/459
(100 %)
0 diff
(100 %id)
TI_1948240674   .a 954 to 1464 1104 to 600     Submitted on the opposite strand 502/1243
(40 %)
47 diff
(96.3 %id)
TI_149306143   .a 965 to 1743 861 to 91   AAA   771/956
(80 %)
13 diff
(98.7 %id)
BF771644 epid_tumor .a 1002 to 1248 1 to 247       247/247
(100 %)
11 diff
(95.6 %id)
BU686217 lung, Primary Lung Epithelial Cells .a 1030 to 1743 730 to 17   AAA   714/714
(100 %)
2 diff
(99.8 %id)
CA311687 Human Lung Epithelial cells, lung .a 1030 to 1751 741 to 19   AAA   720/723
(99 %)
4 diff
(99.5 %id)
BF877913 lung_tumor .a 1042 to 1535 535 to 42     Submitted on the opposite strand 494/535
(92 %)
1 diff
(99.9 %id)
BF878490 lung_tumor .a 1046 to 1539 524 to 30     Submitted on the opposite strand 495/524
(94 %)
5 diff
(99.1 %id)
CB528312 Aveolar Macrophage, lung .a 1052 to 1752 717 to 19   AAA   699/699
(100 %)
4 diff
(99.5 %id)
TI_1948241247   .a 1085 to 1464 977 to 601     Submitted on the opposite strand 377/1259
(29 %)
9 diff
(99.3 %id)
BF000348 colon, colon tumor, RER+ .a 1115 to 1756 649 to 8       642/649
(98 %)
11 diff
(98.4 %id)
AW378399 head_neck .a 1201 to 1440 29 to 267       239/267
(89 %)
7 diff
(97.4 %id)
BU674039 lung, Primary Lung Epithelial Cells .a 1207 to 1755 568 to 19   AAA   550/550
(100 %)
1 diff
(99.9 %id)
AW378361 head_neck .a 1212 to 1411 201 to 1       201/201
(100 %)
6 diff
(97.1 %id)
BF093710 uterus .a 1248 to 1420 1 to 173       173/203
(85 %)
3 diff
(98.6 %id)
BP390897 pancreatic islet .a 1257 to 1756 1 to 500     Submitted on the opposite strand 500/501
(99 %)
3 diff
(99.5 %id)
AI263526 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1259 to 1743 487 to 1       487/497
(97 %)
3 diff
(99.4 %id)
AW296143   .a 1301 to 1755 472 to 18   AAA   455/455
(100 %)
4 diff
(99.2 %id)
AI829878 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1306 to 1752 460 to 16   AAA   445/445
(100 %)
6 diff
(98.7 %id)
AI973162 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1321 to 1744 424 to 1       424/424
(100 %)
0 diff
(100 %id)
AA857496 ovary .a 1347 to 1732 1 to 385     Submitted on the opposite strand 385/396
(97 %)
4 diff
(99.0 %id)
AA709305 uterus .a 1364 to 1745 385 to 3       383/387
(98 %)
0 diff
(100 %id)
AI085155 senescent fibroblast .a 1368 to 1755 386 to 1       386/408
(94 %)
2 diff
(99.6 %id)
C02220   .a 1386 to 1653 1 to 269       269/270
(99 %)
3 diff
(98.9 %id)
BF842262 head_neck .a 1447 to 1747 12 to 310       299/334
(89 %)
3 diff
(99.2 %id)
FN134940 breast carcinoma .a 1604 to 1697 1 to 91       91/91
(100 %)
3 diff
(96.8 %id)
CA306970 Alveolar Macrophage, lung .b 1 to 731 748 to 17 L7X C226M R227Q N228E L229S ... tiling clone, AAA   732/732
(100 %)
1 diff
(99.9 %id)
BP351309   .c 1 to 578 4 to 581 exact tiling clone,   581/581
(100 %)
0 diff
(100 %id)
BE710417 head_neck .d-u 1 to 258 257 to 1 P5L tiling clone,   257/277
(92 %)
5 diff
(98.2 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI