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Gene FAR1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
439 supporting clones for gene FAR1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_032228.5   .a 1 to 5272 2 to 5273 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 5273/5273
(100 %)
0 diff
(100 %id)
DA515509 brain .a 1 to 550 2 to 551   tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
DB160885 thymus .a 1 to 571 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA290785 hippocampus .a 8 to 564 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
AY358784   .a 11 to 2512 1 to 2501 exact     2501/2506
(99 %)
2 diff
(100.0 %id)
CR936619 endometrium carcinoma cell line .a 25 to 4430 1 to 4405 L275P V276G tiling clone, AAA   4405/4405
(100 %)
3 diff
(100.0 %id)
BG720269 testis .a 25 to 676 1 to 653       653/653
(100 %)
6 diff
(99.1 %id)
DB200316 trachea .a 26 to 606 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA022167   .a 27 to 598 2 to 573   capped   572/573
(99 %)
2 diff
(99.7 %id)
DA390878 thalamus .a 28 to 564 2 to 538   capped   537/537
(100 %)
4 diff
(99.3 %id)
CR611981 fetal brain .a 30 to 1783 1 to 1754 exact     1754/1754
(100 %)
0 diff
(100 %id)
DB475791 hippocampus .a 30 to 519 1 to 490       490/496
(98 %)
3 diff
(99.4 %id)
BP363815 lung .a 30 to 611 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP370772 testis .a 30 to 597 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DA070918 cerebellum .a 31 to 606 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB031112 testis .a 31 to 619 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB463967 hippocampus .a 33 to 389 1 to 356       356/356
(100 %)
3 diff
(99.2 %id)
CN353776 embryonic stem cells, cell lines H1, H7, andH9 .a 34 to 667 1 to 634       634/634
(100 %)
0 diff
(100 %id)
DW464289 Liver .a 34 to 140 1 to 106       106/106
(100 %)
7 diff
(93.4 %id)
AV705755 adrenal gland .a 42 to 502 17 to 477       461/485
(95 %)
7 diff
(98.6 %id)
BU172901 melanotic melanoma, skin .a 43 to 878 1 to 844       844/881
(95 %)
24 diff
(97.3 %id)
BE891116 melanotic melanoma, skin .a 47 to 701 1 to 666       666/1078
(61 %)
18 diff
(98.4 %id)
AK315527 brain .a 51 to 1702 1 to 1652 A484P     1652/1652
(100 %)
1 diff
(100.0 %id)
DB292710 uterus .a 51 to 623 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA177800 amygdala .a 52 to 634 2 to 587   capped   586/586
(100 %)
4 diff
(99.4 %id)
DA456925 tongue, tumor tissue .a 52 to 610 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA681141 ovary .a 52 to 572 2 to 522   capped   521/521
(100 %)
1 diff
(99.9 %id)
DA802191 brain .a 52 to 583 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
BP321066 placenta .a 52 to 633 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB026110 testis .a 52 to 564 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DB048546 testis .a 52 to 606 2 to 556   capped   555/556
(99 %)
1 diff
(99.9 %id)
AL699015 human skeletal muscle .a 53 to 602 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DA554001   .a 53 to 531 2 to 481   capped   480/480
(100 %)
1 diff
(99.8 %id)
BP264357 small intestine .a 53 to 634 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA694106   .a 53 to 620 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA903139   .a 53 to 621 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA962000 Spleen .a 53 to 610 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA973244 synovial membrane tissue from rheumatioidarthritis .a 53 to 624 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA528240 brain .a 54 to 672 2 to 620   capped   619/619
(100 %)
0 diff
(100 %id)
DA222338 brain .a 55 to 714 2 to 661   capped   660/660
(100 %)
0 diff
(100 %id)
DA262342 caudate nucleus .a 55 to 618 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BP360589 thalamus .a 56 to 630 8 to 582       575/575
(100 %)
0 diff
(100 %id)
AY423606   .a 57 to 1810 1 to 1754 exact     1754/1754
(100 %)
3 diff
(99.9 %id)
BX643545   .a 57 to 490 1 to 434       434/434
(100 %)
3 diff
(99.4 %id)
BC017377 Ovary, adenocarcinoma .a 58 to 1814 1 to 1757 exact available from MGC, AAA   1757/1757
(100 %)
0 diff
(100 %id)
BX504777   .a 58 to 324 1 to 269       267/269
(99 %)
3 diff
(98.9 %id)
DA207066 brain .a 59 to 631 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA227352 brain .a 59 to 595 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
BX490071   .a 59 to 238 1 to 176       176/176
(100 %)
11 diff
(93.8 %id)
DB050237 testis .a 59 to 630 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB060158 testis .a 60 to 596 2 to 540   capped   539/539
(100 %)
2 diff
(99.7 %id)
AL598283   .a 61 to 268 1 to 208       208/208
(100 %)
4 diff
(98.1 %id)
BP313395 mammary gland .a 61 to 643 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
DB023394 testis .a 63 to 602 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
BX423486 brain, fetal brain .a 64 to 915 34 to 885   fully sequenced,   852/885
(96 %)
6 diff
(99.4 %id)
AY600449   .a 65 to 5272 1 to 5207 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 5207/5207
(100 %)
2 diff
(100.0 %id)
DR005167 Prostate .a 71 to 768 8 to 705       698/705
(99 %)
8 diff
(98.9 %id)
AA376285 lung .a 74 to 432 1 to 360       360/360
(100 %)
4 diff
(98.9 %id)
AL596699 human spinal cord .a 76 to 746 25 to 695     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 671/695
(96 %)
6 diff
(99.2 %id)
CN353772 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 79 to 805 1 to 727       727/727
(100 %)
0 diff
(100 %id)
DB046256 testis .a 83 to 659 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BF689892 melanotic melanoma, high MDR (cell line), skin .a 87 to 783 1 to 700       702/737
(95 %)
20 diff
(97.3 %id)
CN353779 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 103 to 861 9 to 767       759/767
(98 %)
0 diff
(100 %id)
AA385840 Pancreas .a 130 to 453 1 to 327       327/327
(100 %)
4 diff
(98.8 %id)
AA304951 colon .a 145 to 385 30 to 270       241/270
(89 %)
10 diff
(96.3 %id)
DB489030 hypothalamus .a 145 to 576 13 to 443       431/443
(97 %)
7 diff
(98.5 %id)
CV028146 mixed .a 155 to 767 1 to 615       615/615
(100 %)
18 diff
(97.1 %id)
BE747487 adenocarcinoma cell line, ovary .a 222 to 829 1 to 603       605/652
(92 %)
22 diff
(96.7 %id)
AA853257 Bone, Hip .a 358 to 660 1 to 302       302/302
(100 %)
6 diff
(98.1 %id)
CN353771 embryonic stem cells, cell lines H1, H7, andH9 .a 515 to 1200 1 to 686       686/686
(100 %)
2 diff
(99.8 %id)
TI_44169753   .a 531 to 1110 66 to 648       583/654
(89 %)
11 diff
(98.4 %id)
BI551814 brain, hippocampus .a 533 to 1110 1 to 581       581/587
(98 %)
11 diff
(98.2 %id)
BG223288 moderate to poorly differentiated invasivecarcinoma, tongue .a 566 to 845 1 to 280       280/282
(99 %)
9 diff
(96.9 %id)
DA697262   .a 688 to 1262 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
FN094803 breast carcinoma .a 724 to 792 1 to 68       68/68
(100 %)
3 diff
(95.6 %id)
AW854430 colon .a 731 to 1188 12 to 468       457/469
(97 %)
7 diff
(98.6 %id)
BM457940 leiomyosarcoma, uterus .a 793 to 1504 1 to 721       721/1304
(55 %)
16 diff
(98.8 %id)
TI_1948135970   .a 809 to 1701 1018 to 125       896/1298
(69 %)
23 diff
(98.3 %id)
T10545   .a 817 to 919 1 to 103     Submitted on the opposite strand 103/103
(100 %)
0 diff
(100 %id)
BG954563 colon .a 839 to 1096 266 to 17       250/301
(83 %)
22 diff
(92.7 %id)
BE535508 cervix .a 862 to 1514 1 to 655       655/657
(99 %)
9 diff
(98.7 %id)
TI_1948135616   .a 878 to 1701 953 to 121       831/1265
(65 %)
27 diff
(97.9 %id)
BX423485 brain, fetal brain .a 885 to 1783 901 to 1   fully sequenced,   901/901
(100 %)
4 diff
(99.6 %id)
TI_1948136676   .a 912 to 1701 928 to 137       792/1325
(59 %)
24 diff
(98.2 %id)
TI_1948135617   .a 913 to 1701 915 to 124       792/1153
(68 %)
14 diff
(98.8 %id)
BM455230 lymph, lymphoma, cell line .a 927 to 1996 1 to 1072       1072/1090
(98 %)
37 diff
(96.7 %id)
BF690122 melanotic melanoma, high MDR (cell line), skin .a 994 to 1792 806 to 7       800/971
(82 %)
10 diff
(99.0 %id)
TI_1948136330   .a 1034 to 1701 790 to 123       668/1127
(59 %)
22 diff
(98.1 %id)
TI_1948135971   .a 1035 to 1701 789 to 122       668/1143
(58 %)
8 diff
(99.4 %id)
TI_1948136677   .a 1065 to 1701 779 to 124       604/1241
(48 %)
25 diff
(98.0 %id)
DA106545 cerebellum .a 1086 to 1637 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA215427 brain .a 1280 to 1647 171 to 538   capped   368/537
(68 %)
6 diff
(98.9 %id)
DB524856 testis .a 1342 to 1815 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
CB133786 Liver .a 1364 to 1916 1 to 553       553/553
(100 %)
0 diff
(100 %id)
CN353774 embryonic stem cells, cell lines H1, H7, andH9 .a 1396 to 2144 1 to 749       749/749
(100 %)
2 diff
(99.8 %id)
BY996324   .a 1409 to 2027 35 to 653       619/653
(94 %)
6 diff
(99.1 %id)
AA332903 Embryo, 8 weeks .a 1432 to 1771 10 to 349       340/350
(97 %)
8 diff
(97.8 %id)
BP339418 Spleen .a 1458 to 2043 1 to 585       585/585
(100 %)
2 diff
(99.7 %id)
BE707585 head_neck .a 1466 to 1630 128 to 292       165/292
(56 %)
6 diff
(98.0 %id)
AW387439 stomach .a 1487 to 1632 1 to 145       145/145
(100 %)
1 diff
(99.4 %id)
BE464102 pooled germ cell tumors .a 1537 to 2049 513 to 1       513/513
(100 %)
0 diff
(100 %id)
BI223879 cervical carcinoma cell line, cervix .a 1544 to 2126 2 to 604       603/1269
(47 %)
45 diff
(96.5 %id)
AI867439 pooled germ cell tumors .a 1548 to 2049 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AA262020 germinal center B cell .a 1588 to 2029 1 to 442       442/442
(100 %)
0 diff
(100 %id)
BE045956 pooled germ cell tumors .a 1591 to 2049 459 to 1       459/459
(100 %)
1 diff
(99.8 %id)
BF059315 pooled germ cell tumors .a 1606 to 2049 444 to 1       444/444
(100 %)
0 diff
(100 %id)
AW016624   .a 1629 to 2048 437 to 18   AAA   420/420
(100 %)
1 diff
(99.8 %id)
CN353775 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1672 to 2330 1 to 659       659/659
(100 %)
0 diff
(100 %id)
BG611238 adenocarcinoma, Prostate .a 1718 to 2452 1 to 744       744/903
(82 %)
12 diff
(98.7 %id)
FN111350 breast carcinoma .a 1734 to 1806 1 to 72       72/73
(98 %)
2 diff
(97.3 %id)
BU507508 leiomyosarcoma, uterus .a 1745 to 2502 1 to 765       765/892
(85 %)
11 diff
(98.8 %id)
BM354039 Islets of Langerhans, Pancreas .a 1788 to 2326 1 to 537   fully sequenced,   537/537
(100 %)
1 diff
(99.9 %id)
CN353777 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1849 to 2507 12 to 670       659/670
(98 %)
6 diff
(99.2 %id)
DA711606   .a 1853 to 2428 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA806701 brain .a 1869 to 2433 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
AA683254 schizophrenic brain S-11 frontal lobe .a 1895 to 2255 1 to 361     Submitted on the opposite strand 361/361
(100 %)
0 diff
(100 %id)
DA044937 bladder .a 1938 to 2500 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA181193 amygdala .a 1939 to 2513 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
EH344139   .a 1946 to 2023 1 to 78       78/78
(100 %)
2 diff
(97.5 %id)
DA801765 brain .a 1950 to 2445 2 to 497   capped   496/496
(100 %)
1 diff
(99.8 %id)
AI638460 pooled germ cell tumors .a 1995 to 2512 529 to 12   AAA   518/518
(100 %)
1 diff
(99.9 %id)
TI_57182250   .a 2025 to 2634 26 to 632       607/632
(96 %)
6 diff
(99.1 %id)
BI771583 pooled lung and spleen .a 2026 to 2634 1 to 605       605/605
(100 %)
15 diff
(97.6 %id)
BF063343 colon, colon tumor, RER+ .a 2030 to 2512 483 to 1       483/483
(100 %)
1 diff
(99.8 %id)
CB044463 colon, juvenile granulosa tumor .a 2057 to 2601 24 to 568       545/568
(95 %)
6 diff
(99.0 %id)
BX498317 Liver .a 2088 to 2730 1 to 643       643/643
(100 %)
2 diff
(99.7 %id)
BQ223897 embryonal carcinoma, cell line, testis .a 2090 to 2890 1 to 804       804/883
(91 %)
9 diff
(99.0 %id)
DA301778 hippocampus .a 2152 to 2738 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
CD642181 Embryonic Stem cells .a 2208 to 3006 50 to 845       796/849
(93 %)
13 diff
(98.5 %id)
BE185174 head_neck .a 2220 to 2546 15 to 341       327/341
(95 %)
8 diff
(97.7 %id)
BE714728 head_neck .a 2220 to 2524 15 to 319       305/319
(95 %)
6 diff
(98.2 %id)
DA568453 whole embryo, mainly head .a 2263 to 2859 2 to 598   capped   597/599
(99 %)
2 diff
(99.7 %id)
BM273110 Islets of Langerhans, Pancreas .a 2296 to 2837 540 to 1   fully sequenced,   540/540
(100 %)
6 diff
(98.9 %id)
DA293446 hippocampus .a 2308 to 2877 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BE327997 malignant melanoma, metastatic to lymphnode, skin .a 2327 to 2826 500 to 1       500/500
(100 %)
0 diff
(100 %id)
AW977148   .a 2341 to 2823 485 to 3     Submitted on the opposite strand 483/528
(91 %)
0 diff
(100 %id)
DA140184 alzheimer cortex .a 2343 to 2895 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
BE185280 head_neck .a 2351 to 2680 15 to 345       331/358
(92 %)
6 diff
(98.4 %id)
DA829699 placenta .a 2359 to 3009 2 to 656   capped   655/694
(94 %)
10 diff
(98.6 %id)
FN063745 breast carcinoma .a 2377 to 2491 1 to 117       117/118
(99 %)
3 diff
(97.5 %id)
FN078907 breast carcinoma .a 2377 to 2491 1 to 116       116/116
(100 %)
1 diff
(99.2 %id)
BF448337 carcinoid, lung .a 2377 to 2827 454 to 4       451/454
(99 %)
0 diff
(100 %id)
BY799460 eye .a 2407 to 3038 1 to 632       632/632
(100 %)
2 diff
(99.7 %id)
AI215907 carcinoid, lung .a 2425 to 2826 402 to 1       402/402
(100 %)
0 diff
(100 %id)
BQ312116 breast_normal .a 2431 to 2789 358 to 1       358/358
(100 %)
2 diff
(99.5 %id)
AA281165 germinal center B cell .a 2447 to 2789 1 to 343       343/343
(100 %)
0 diff
(100 %id)
AA732368 germinal center B cell .a 2458 to 2832 378 to 4       375/378
(99 %)
0 diff
(100 %id)
DA287607 corpus callosum .a 2484 to 3030 2 to 549   capped   548/548
(100 %)
3 diff
(99.5 %id)
DA033800   .a 2517 to 3088 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BM542098 melanotic melanoma, skin .a 2550 to 3485 1 to 942       942/1056
(89 %)
23 diff
(97.9 %id)
BM510583 insulinoma, Pancreas .a 2621 to 3208 1 to 589     Submitted on the opposite strand 589/589
(100 %)
2 diff
(99.7 %id)
DA141104 alzheimer cortex .a 2625 to 3185 2 to 559   capped   558/558
(100 %)
4 diff
(99.3 %id)
Z45666 brain, total brain .a 2647 to 2858 1 to 211       211/218
(96 %)
2 diff
(99.1 %id)
BF038842 adenocarcinoma, ovary .a 2682 to 3369 1 to 687       687/687
(100 %)
2 diff
(99.8 %id)
AK024967 colon .a 2683 to 4422 1 to 1740   available from FLJ, AAA   1740/1740
(100 %)
1 diff
(100.0 %id)
BG261090 bladder, transitional cell papilloma, cell line .a 2724 to 3405 1 to 675       675/964
(70 %)
23 diff
(97.7 %id)
DA287823 corpus callosum .a 2734 to 3296 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
CB146400 Liver .a 2824 to 3366 1 to 543       543/543
(100 %)
4 diff
(99.3 %id)
BQ222550 leiomyosarcoma, uterus .a 2888 to 3907 1 to 1021       1021/1023
(99 %)
24 diff
(97.7 %id)
CB113184 Liver .a 2889 to 3443 1 to 555       555/555
(100 %)
0 diff
(100 %id)
BG953691 colon .a 2916 to 3194 281 to 1       281/292
(96 %)
14 diff
(95.3 %id)
BU188838 bone marrow, from acute myelogenous leukemia .a 2923 to 3695 1 to 787       787/790
(99 %)
25 diff
(96.9 %id)
AL047122 uterus .a 2933 to 3321 1 to 389       389/389
(100 %)
0 diff
(100 %id)
AL079917 uterus .a 2933 to 3321 1 to 389       389/389
(100 %)
0 diff
(100 %id)
BE613024 adenocarcinoma, ovary .a 2936 to 3672 1 to 725       725/957
(75 %)
36 diff
(96.3 %id)
N43861 melanocyte .a 3018 to 3314 1 to 297       297/297
(100 %)
2 diff
(99.4 %id)
CD356178 Blood vessels - aorta, basilar and artery .a 3031 to 3419 1 to 392       392/912
(42 %)
7 diff
(99.3 %id)
DA166270 amygdala .a 3050 to 3631 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DA197131 alzheimer cortex .a 3056 to 3635 2 to 579   capped   578/578
(100 %)
6 diff
(99.0 %id)
BG530008 embryonal carcinoma, testis .a 3091 to 3898 1 to 825       825/825
(100 %)
35 diff
(95.8 %id)
AA325713 brain, cerebellum .a 3121 to 3476 1 to 360       360/360
(100 %)
4 diff
(98.9 %id)
CN360896 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3125 to 3812 1 to 688       688/688
(100 %)
2 diff
(99.8 %id)
AW955341   .a 3134 to 3713 1 to 588       588/619
(94 %)
14 diff
(97.8 %id)
CA394358 eye, RPE/choroid .a 3139 to 3711 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DA812587 ovary, tumor tissue .a 3159 to 3836 2 to 679   capped   678/678
(100 %)
1 diff
(99.9 %id)
BQ717935 sympathetic trunk .a 3162 to 4017 1 to 859       859/859
(100 %)
8 diff
(99.1 %id)
BF978829 melanotic melanoma, high MDR, skin .a 3165 to 3854 1 to 686       686/781
(87 %)
17 diff
(97.9 %id)
DA821932 pericardium .a 3172 to 3731 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
CK820002 Islets of Langerhans, Pancreas .a 3176 to 3791 1 to 616       616/616
(100 %)
0 diff
(100 %id)
AV722552 hypothalamus .a 3187 to 3902 1 to 708       708/711
(99 %)
13 diff
(98.2 %id)
BI768824 pooled lung and spleen .a 3187 to 3992 1 to 798       798/800
(99 %)
18 diff
(97.8 %id)
TI_57181486   .a 3187 to 3992 58 to 855       798/857
(93 %)
18 diff
(97.9 %id)
CN360898 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3190 to 3922 8 to 741       734/741
(99 %)
6 diff
(99.2 %id)
BM273243 Islets of Langerhans, Pancreas .a 3192 to 3714 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
BM354011 Islets of Langerhans, Pancreas .a 3192 to 3711 1 to 520       520/520
(100 %)
0 diff
(100 %id)
CB044462 colon, juvenile granulosa tumor .a 3213 to 3805 609 to 17   AAA   593/593
(100 %)
0 diff
(100 %id)
CX787808 human embryonic stem cells .a 3213 to 4109 1 to 897       897/897
(100 %)
0 diff
(100 %id)
BM706243 eye, lens .a 3219 to 3870 1 to 651     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 651/651
(100 %)
1 diff
(99.9 %id)
CN360897 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3235 to 3534 1 to 300       300/300
(100 %)
0 diff
(100 %id)
AV722089 hypothalamus .a 3249 to 3957 1 to 702       702/702
(100 %)
18 diff
(97.5 %id)
BF243650 bone marrow, from acute myelogenous leukemia .a 3272 to 3929 1 to 653       653/864
(75 %)
31 diff
(96.5 %id)
AW003433 normal epithelium, ovary .a 3288 to 3805 517 to 1       517/517
(100 %)
3 diff
(99.5 %id)
AA026481 uterus .a 3305 to 3674 1 to 374       374/377
(99 %)
8 diff
(97.9 %id)
BG623548 placenta .a 3320 to 4041 1 to 714       714/714
(100 %)
11 diff
(98.5 %id)
BF842349 head_neck .a 3329 to 3646 19 to 336       318/349
(91 %)
1 diff
(99.8 %id)
BF691606 melanotic melanoma, high MDR, skin .a 3342 to 4058 1 to 708       708/882
(80 %)
12 diff
(98.7 %id)
DA135419 alzheimer cortex .a 3347 to 3954 2 to 609   capped   608/608
(100 %)
0 diff
(100 %id)
BF701692 brain, primitive neuroectoderm .a 3357 to 4057 1 to 687       687/787
(87 %)
20 diff
(97.5 %id)
W74085 heart .a 3361 to 3789 1 to 429       429/429
(100 %)
0 diff
(100 %id)
AF086349   .a 3362 to 3858 1 to 497   AAA   497/497
(100 %)
0 diff
(100 %id)
BG742217 skin .a 3363 to 4154 1 to 792       792/792
(100 %)
12 diff
(98.5 %id)
BG924615 cartilage .a 3370 to 3946 86 to 662       577/594
(97 %)
6 diff
(99.0 %id)
W72375 heart .a 3392 to 3859 469 to 1       469/469
(100 %)
1 diff
(99.8 %id)
BU173136 eye, retinoblastoma .a 3395 to 4275 1 to 884       884/894
(98 %)
9 diff
(99.0 %id)
BG565677 Liver .a 3407 to 4118 1 to 712       712/712
(100 %)
9 diff
(98.8 %id)
AA248064   .a 3431 to 3643 1 to 213       213/213
(100 %)
5 diff
(97.7 %id)
BG117845 adenocarcinoma, cell line, Liver .a 3431 to 4130 1 to 692       692/969
(71 %)
25 diff
(97.5 %id)
CA778383 Pancreas, Purified pancreatic islet .a 3442 to 4265 16 to 839       824/839
(98 %)
6 diff
(99.3 %id)
AI743370 pooled .a 3466 to 4037 572 to 1       572/572
(100 %)
1 diff
(99.9 %id)
BQ230808 brain .a 3467 to 4315 21 to 880       860/936
(91 %)
24 diff
(97.5 %id)
TI_158434120   .a 3482 to 4037 629 to 75   AAA   555/557
(99 %)
15 diff
(97.4 %id)
TI_149293342   .a 3499 to 4387 963 to 89   AAA   875/976
(89 %)
22 diff
(97.8 %id)
AL135152 melanoma (MeWo cell line) .a 3503 to 4091 1 to 589       589/589
(100 %)
5 diff
(99.2 %id)
BF956853 nervous_normal .a 3513 to 4005 1 to 496       496/496
(100 %)
7 diff
(98.6 %id)
BQ026173 placenta .a 3540 to 4037 515 to 18   AAA   498/498
(100 %)
1 diff
(99.8 %id)
BG541708 lung .a 3541 to 4308 1 to 752       752/854
(88 %)
17 diff
(98.1 %id)
BM782950 stomach .a 3542 to 4237 1 to 696       696/696
(100 %)
0 diff
(100 %id)
BP422479 small intestine .a 3588 to 4096 1 to 509     Submitted on the opposite strand 509/509
(100 %)
0 diff
(100 %id)
TI_149271449   .a 3608 to 4427 893 to 80   AAA   814/999
(81 %)
43 diff
(95.7 %id)
FN134618 breast carcinoma .a 3631 to 3734 98 to 1     Submitted on the opposite strand 98/98
(100 %)
6 diff
(93.9 %id)
BQ022659 placenta .a 3651 to 4037 405 to 19   AAA   387/387
(100 %)
1 diff
(99.8 %id)
TI_149308852   .a 3657 to 4421 850 to 89   AAA   762/959
(79 %)
17 diff
(98.3 %id)
CN360895 embryonic stem cells, DMSO-treated H9 cellline .a 3659 to 4097 1 to 439       439/439
(100 %)
0 diff
(100 %id)
EC516467 Prostate .a 3676 to 3787 112 to 1       112/112
(100 %)
0 diff
(100 %id)
BQ001747 lung, Metastatic Chondrosarcoma .a 3683 to 4422 755 to 19   AAA   737/739
(99 %)
5 diff
(99.4 %id)
BQ022158 placenta .a 3683 to 4037 372 to 18   AAA   355/355
(100 %)
4 diff
(98.9 %id)
AW167594 cervix .a 3687 to 3934 1 to 248     Submitted on the opposite strand 248/248
(100 %)
0 diff
(100 %id)
Z42027 brain, total brain .a 3713 to 3967 23 to 278       256/278
(92 %)
6 diff
(97.9 %id)
H24157 whole brain .a 3713 to 4123 22 to 442       421/442
(95 %)
6 diff
(98.7 %id)
BM975087 lung .a 3716 to 4405 690 to 1       690/691
(99 %)
4 diff
(99.5 %id)
BI481101 Native Retinal Pigment Epithelium sheets, retina .a 3717 to 4172 11 to 468       458/470
(97 %)
7 diff
(98.6 %id)
EC442028 Prostate .a 3725 to 3818 117 to 24       94/117
(80 %)
0 diff
(100 %id)
AA262700 germinal center B cell .a 3746 to 4089 1 to 345     Submitted on the opposite strand 345/345
(100 %)
6 diff
(98.3 %id)
BF817627 colon_ins .a 3760 to 4135 376 to 1     Submitted on the opposite strand 376/377
(99 %)
1 diff
(99.8 %id)
BM849241 myeloma .a 3770 to 4354 1 to 585       585/585
(100 %)
0 diff
(100 %id)
EC461004 Prostate .a 3772 to 3890 118 to 2       117/118
(99 %)
0 diff
(100 %id)
EC533974 Prostate .a 3772 to 3890 119 to 1       119/119
(100 %)
0 diff
(100 %id)
BG427776 Kidney .a 3776 to 4573 1 to 784       784/814
(96 %)
21 diff
(97.5 %id)
AA446403   .a 3796 to 4289 1 to 494       494/494
(100 %)
0 diff
(100 %id)
BU687298 lung .a 3796 to 4421 644 to 19   AAA   626/626
(100 %)
3 diff
(99.6 %id)
R24764 whole brain .a 3805 to 4174 1 to 378     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 378/421
(89 %)
9 diff
(97.9 %id)
BF817626 colon_ins .a 3808 to 4175 382 to 15     Submitted on the opposite strand 368/383
(96 %)
0 diff
(100 %id)
BI715351 Pancreas, Purified pancreatic islet .a 3811 to 4302 11 to 502       492/502
(98 %)
6 diff
(98.9 %id)
H29424 whole brain .a 3813 to 4206 1 to 398     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 398/398
(100 %)
9 diff
(97.8 %id)
BM273012 Islets of Langerhans, Pancreas .a 3828 to 4422 595 to 1       595/595
(100 %)
0 diff
(100 %id)
BM273083 Islets of Langerhans, Pancreas .a 3828 to 4422 595 to 1       595/595
(100 %)
1 diff
(99.9 %id)
AV726324 hypothalamus .a 3837 to 4427 1 to 590   AAA   590/590
(100 %)
10 diff
(98.4 %id)
H29646 whole brain .a 3839 to 4260 1 to 423     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 423/423
(100 %)
7 diff
(98.4 %id)
H29423 whole brain .a 3839 to 4275 1 to 438       438/483
(90 %)
23 diff
(95.3 %id)
BU674421 lung, Primary Lung Epithelial Cells .a 3870 to 4427 574 to 17   AAA   558/558
(100 %)
4 diff
(99.3 %id)
AW872936 adrenal gland, neuroblastoma .a 3872 to 4421 554 to 5       550/554
(99 %)
0 diff
(100 %id)
BP396277 pancreatic islet .a 3883 to 4428 1 to 546     Submitted on the opposite strand 546/549
(99 %)
1 diff
(99.9 %id)
BF690963 melanotic melanoma, high MDR, skin .a 3893 to 4397 1 to 495       495/558
(88 %)
16 diff
(97.2 %id)
BM766138 stomach .a 3907 to 4424 1 to 518       518/520
(99 %)
5 diff
(99.1 %id)
AW872927 adrenal gland, neuroblastoma .a 3908 to 4421 518 to 5       514/518
(99 %)
0 diff
(100 %id)
AU117141 whole embryo, mainly head .a 3914 to 4445 199 to 735   capped   537/759
(70 %)
13 diff
(98.3 %id)
AA255690 germinal center B cell .a 3917 to 4388 472 to 1     Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
BP394614 pancreatic islet .a 3927 to 4421 1 to 495     Submitted on the opposite strand 495/499
(99 %)
1 diff
(99.8 %id)
AI380641 B-cell, chronic lymphotic leukemia .a 3932 to 4424 508 to 16   AAA   493/493
(100 %)
0 diff
(100 %id)
DB374609 placenta .a 3945 to 4422 479 to 1       479/479
(100 %)
6 diff
(98.8 %id)
R20691 whole brain .a 3951 to 4337 1 to 397       397/402
(98 %)
12 diff
(97.1 %id)
FN073342 breast carcinoma .a 3960 to 4020 1 to 60       60/61
(98 %)
2 diff
(96.8 %id)
AI452721 pooled .a 3960 to 4422 475 to 13   AAA   463/463
(100 %)
0 diff
(100 %id)
AW029596 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3961 to 4426 466 to 1       466/466
(100 %)
0 diff
(100 %id)
BE350119 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 3961 to 4421 479 to 19   AAA   461/461
(100 %)
1 diff
(99.8 %id)
N50377 multiple sclerosis lesions .a 3963 to 4090 1 to 128   fully sequenced,   128/128
(100 %)
0 diff
(100 %id)
AV703907 adrenal gland .a 3965 to 4359 1 to 395       395/395
(100 %)
1 diff
(99.8 %id)
AA327905   .a 3966 to 4330 1 to 369       369/369
(100 %)
9 diff
(97.6 %id)
BM841115 lymph node, stomach .a 3968 to 4422 1 to 455   AAA   455/455
(100 %)
0 diff
(100 %id)
AA621380   .a 3981 to 4424 447 to 5       443/447
(99 %)
0 diff
(100 %id)
AI924022 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3982 to 4422 456 to 16   AAA   441/441
(100 %)
1 diff
(99.8 %id)
AA329817   .a 3983 to 4212 1 to 230       230/230
(100 %)
0 diff
(100 %id)
AI242088 pooled .a 3983 to 4423 449 to 9       441/449
(98 %)
0 diff
(100 %id)
AW474350 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 3985 to 4423 443 to 4       440/443
(99 %)
0 diff
(100 %id)
AW339733 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .a 3985 to 4420 436 to 1       436/436
(100 %)
0 diff
(100 %id)
BG167019 hypernephroma, cell line, Kidney .a 3986 to 4425 1 to 440   AAA   440/440
(100 %)
1 diff
(99.8 %id)
BF222056 Prostate .a 3990 to 4427 438 to 1       438/438
(100 %)
0 diff
(100 %id)
AA653620   .a 4024 to 4421 399 to 2       398/399
(99 %)
0 diff
(100 %id)
AI620737 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 4029 to 4430 413 to 13       401/413
(97 %)
0 diff
(100 %id)
AI679049 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 4042 to 4425 414 to 31   AAA   384/384
(100 %)
3 diff
(99.3 %id)
BF575522 muscle (skeletal) .a 4042 to 4672 1 to 625       625/630
(99 %)
32 diff
(95.0 %id)
AA649207 germinal center B cell .a 4048 to 4416 373 to 2       372/373
(99 %)
0 diff
(100 %id)
CF456517 peripheral nervous system .a 4049 to 4812 28 to 791       764/792
(96 %)
3 diff
(99.7 %id)
AI051532   .a 4052 to 4428 379 to 3       377/381
(98 %)
0 diff
(100 %id)
AA626092 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4056 to 4425 370 to 1       370/370
(100 %)
0 diff
(100 %id)
N51591 multiple sclerosis lesions .a 4060 to 4422 371 to 1   fully sequenced,   371/371
(100 %)
4 diff
(99.0 %id)
AA261886 germinal center B cell .a 4067 to 4510 1 to 437       437/437
(100 %)
8 diff
(98.2 %id)
DW439897 Liver .a 4078 to 4301 17 to 240       224/240
(93 %)
8 diff
(96.7 %id)
AI027065 parathyroid gland, parathyroid tumor .a 4081 to 4425 370 to 26   AAA   345/345
(100 %)
0 diff
(100 %id)
BM830046 stomach .a 4087 to 4421 1 to 335   AAA   335/335
(100 %)
1 diff
(99.8 %id)
BE242426 leukopheresis .a 4091 to 4426 337 to 2       336/337
(99 %)
0 diff
(100 %id)
AA853258 Bone, Hip .a 4095 to 4386 299 to 8       292/299
(97 %)
0 diff
(100 %id)
EC470873 Prostate .a 4105 to 4200 8 to 103       96/103
(93 %)
6 diff
(94.2 %id)
AA810965 germinal center B cell .a 4111 to 4378 285 to 18   AAA   268/268
(100 %)
0 diff
(100 %id)
EC444783 Prostate .a 4121 to 4186 1 to 67       67/68
(98 %)
3 diff
(95.6 %id)
N48495 multiple sclerosis lesions .a 4137 to 4438 1 to 302       302/302
(100 %)
1 diff
(99.7 %id)
Z41338 brain, total brain .a 4150 to 4421 272 to 1       272/272
(100 %)
0 diff
(100 %id)
EC563192 Prostate .a 4155 to 4274 1 to 119       119/120
(99 %)
3 diff
(97.5 %id)
AI735123 colon .a 4175 to 4248 74 to 1       74/74
(100 %)
0 diff
(100 %id)
AA165135   .a 4178 to 4421 245 to 2       244/245
(99 %)
0 diff
(100 %id)
N77789 multiple sclerosis lesions .a 4189 to 4378 226 to 422       399/424
(94 %)
16 diff
(96.3 %id)
AA629115   .a 4199 to 4422 224 to 1       224/224
(100 %)
0 diff
(100 %id)
EC570752 Prostate .a 4287 to 4420 138 to 4       135/138
(97 %)
0 diff
(100 %id)
AA903568 pooled germ cell tumors .a 4299 to 4423 131 to 7       125/131
(95 %)
0 diff
(100 %id)
EC555945 Prostate .a 4306 to 4420 1 to 119       119/123
(96 %)
6 diff
(95.2 %id)
TI_151750322   .a 4335 to 5042 936 to 82   AAA   855/1055
(81 %)
66 diff
(93.8 %id)
N94877 multiple sclerosis lesions .a 4355 to 4728 1 to 375   fully sequenced,   375/375
(100 %)
1 diff
(99.8 %id)
BG107731 Bone, osteosarcoma, cell line .a 4364 to 4852 1 to 489       489/489
(100 %)
0 diff
(100 %id)
AA026320 uterus .a 4367 to 4425 59 to 1       59/59
(100 %)
0 diff
(100 %id)
AL713674 amygdala .a 4372 to 5269 1 to 898   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 898/898
(100 %)
2 diff
(99.8 %id)
BG619981 placenta .a 4383 to 5053 1 to 675       675/773
(87 %)
14 diff
(98.2 %id)
CN294257 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4398 to 5053 1 to 656   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 656/656
(100 %)
0 diff
(100 %id)
BI254820 cervical carcinoma cell line, cervix .a 4418 to 5093 1 to 675       675/676
(99 %)
3 diff
(99.6 %id)
CB987064 Pooled-Glandular .a 4433 to 5083 1 to 667       667/799
(83 %)
27 diff
(96.7 %id)
AA084313 pineal gland .a 4436 to 4602 1 to 168       168/168
(100 %)
2 diff
(98.9 %id)
BE613180 adenocarcinoma, ovary .a 4440 to 5201 801 to 18       784/981
(79 %)
0 diff
(100 %id)
AA767025 germinal center B cell .a 4442 to 4805 1 to 364     Submitted on the opposite strand 364/364
(100 %)
2 diff
(99.5 %id)
TI_154033315   .a 4457 to 5269 881 to 77   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 805/929
(86 %)
15 diff
(98.4 %id)
H13666 placenta .a 4469 to 4785 1 to 325   fully sequenced,   325/325
(100 %)
9 diff
(97.3 %id)
R31818 placenta .a 4470 to 4851 1 to 401   fully sequenced,   401/401
(100 %)
21 diff
(94.8 %id)
BU521046 leiomyosarcoma, uterus .a 4472 to 5262 1 to 790       790/795
(99 %)
4 diff
(99.5 %id)
CB160241 Liver .a 4475 to 5091 1 to 615       615/615
(100 %)
4 diff
(99.4 %id)
DB372005 ovary, tumor tissue .a 4496 to 5053 552 to 1       552/559
(98 %)
22 diff
(96.1 %id)
AL596700 human spinal cord .a 4552 to 5269 736 to 21   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 716/716
(100 %)
2 diff
(99.8 %id)
TI_149299219   .a 4554 to 5266 791 to 81   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 711/781
(91 %)
18 diff
(97.7 %id)
TI_149291102   .a 4572 to 5272 778 to 78   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 701/701
(100 %)
2 diff
(99.8 %id)
AA905580 pooled .a 4574 to 5053 480 to 1       480/480
(100 %)
1 diff
(99.8 %id)
CA443280 lung, Metastatic Chondrosarcoma .a 4578 to 5269 709 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 691/691
(100 %)
3 diff
(99.6 %id)
BG910698 anaplastic oligodendroglioma with 1p/19qloss, brain .a 4579 to 5064 1 to 495       495/1048
(47 %)
13 diff
(98.8 %id)
BQ004581 Chondrosarcoma, Left Pelvis .a 4583 to 5272 708 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 690/690
(100 %)
2 diff
(99.8 %id)
BQ003080 Chondrosarcoma, Left Pelvis .a 4592 to 5269 693 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 678/678
(100 %)
2 diff
(99.8 %id)
BM973849 lung .a 4593 to 5272 698 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 680/680
(100 %)
2 diff
(99.8 %id)
BQ003896 Chondrosarcoma, Left Pelvis .a 4594 to 5269 691 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 676/676
(100 %)
0 diff
(100 %id)
BQ188169 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4594 to 5103 1 to 509       509/509
(100 %)
1 diff
(99.9 %id)
BQ008915 Chondrosarcoma, Left Pelvis .a 4597 to 5266 687 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 669/669
(100 %)
1 diff
(99.9 %id)
AI378343 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4606 to 5054 449 to 1       449/449
(100 %)
0 diff
(100 %id)
BU737007 eye, lens .a 4608 to 5272 683 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 665/665
(100 %)
4 diff
(99.4 %id)
AI888214 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 4626 to 5055 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AW474137 lymph node, lymphoma, follicular mixed small and largecell .a 4626 to 5056 431 to 1       431/431
(100 %)
0 diff
(100 %id)
N62882 multiple sclerosis lesions .a 4629 to 5051 426 to 1       426/426
(100 %)
3 diff
(99.3 %id)
N33468 melanocyte .a 4638 to 5053 421 to 1       421/421
(100 %)
9 diff
(97.9 %id)
CD000695 Pooled-Skin .a 4642 to 5264 1 to 626       626/767
(81 %)
9 diff
(98.9 %id)
BF576297 muscle (skeletal) .a 4660 to 5202 1 to 541       541/654
(82 %)
10 diff
(98.5 %id)
BF002686 colon, colon tumor, RER+ .a 4671 to 5115 1 to 443     Submitted on the opposite strand 443/443
(100 %)
4 diff
(99.1 %id)
FN077014 breast carcinoma .a 4678 to 4779 100 to 1     Submitted on the opposite strand 100/103
(97 %)
2 diff
(98.1 %id)
AW341786 carcinoid, lung .a 4678 to 5144 1 to 469     Submitted on the opposite strand 469/471
(99 %)
5 diff
(99.0 %id)
DB354879 whole embryo, mainly head .a 4687 to 5266 576 to 1       576/580
(99 %)
12 diff
(98.0 %id)
AI248538 liver and spleen .a 4690 to 5053 364 to 1       364/364
(100 %)
2 diff
(99.5 %id)
AI694692 carcinoid, lung .a 4692 to 5167 18 to 492     Submitted on the opposite strand 475/492
(96 %)
6 diff
(98.8 %id)
BE674321 carcinoid, lung .a 4695 to 5056 362 to 1       362/362
(100 %)
0 diff
(100 %id)
DB354964 whole embryo, mainly head .a 4696 to 5267 571 to 3       569/581
(97 %)
0 diff
(100 %id)
N63551 multiple sclerosis lesions .a 4698 to 5054 357 to 1   fully sequenced,   357/357
(100 %)
0 diff
(100 %id)
AI282263 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 4701 to 5058 358 to 1       358/358
(100 %)
0 diff
(100 %id)
BU684905 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 4703 to 5266 582 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 564/564
(100 %)
0 diff
(100 %id)
DB324090   .a 4708 to 5272 565 to 1       565/565
(100 %)
0 diff
(100 %id)
BE646311 Prostate .a 4713 to 5266 553 to 1       553/553
(100 %)
1 diff
(99.9 %id)
AA886885 Kidney .a 4715 to 5268 555 to 3       553/555
(99 %)
0 diff
(100 %id)
AI816394 brain, frontal lobe .a 4718 to 5268 554 to 6       549/554
(99 %)
0 diff
(100 %id)
AI888525 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 4720 to 5269 549 to 1       549/549
(100 %)
1 diff
(99.9 %id)
BF737364 bladder_tumor .a 4722 to 5121 401 to 6     Submitted on the opposite strand 396/401
(98 %)
0 diff
(100 %id)
BX100881 whole brain .a 4724 to 5274 561 to 10       552/561
(98 %)
0 diff
(100 %id)
AA744585 germinal center B cell .a 4742 to 5274 532 to 3       530/532
(99 %)
0 diff
(100 %id)
H13667 placenta .a 4755 to 5053 302 to 1   fully sequenced,   302/302
(100 %)
7 diff
(97.7 %id)
BP397383 pancreatic islet .a 4756 to 5252 1 to 499     Submitted on the opposite strand 499/499
(100 %)
2 diff
(99.6 %id)
BI714783 Pancreas, Purified pancreatic islet .a 4773 to 5274 503 to 2       502/503
(99 %)
0 diff
(100 %id)
AA975132 leiomyosarcoma, soft tissue .a 4779 to 5274 501 to 7       495/501
(98 %)
0 diff
(100 %id)
AI127622 uterus .a 4779 to 5266 488 to 1       488/488
(100 %)
0 diff
(100 %id)
AA705002 liver and spleen .a 4805 to 5266 462 to 1       462/462
(100 %)
2 diff
(99.6 %id)
AA987282 carcinoid, lung .a 4805 to 5268 463 to 1       463/463
(100 %)
1 diff
(99.8 %id)
AA446099   .a 4818 to 5268 452 to 2       451/452
(99 %)
0 diff
(100 %id)
AW879154 ovary .a 4820 to 4952 129 to 1       129/129
(100 %)
11 diff
(91.5 %id)
AI553871 anaplastic oligodendroglioma, brain .a 4822 to 5274 455 to 3       453/455
(99 %)
0 diff
(100 %id)
AI335675 uterus .a 4828 to 5274 448 to 3       446/448
(99 %)
0 diff
(100 %id)
AI022653 liver and spleen .a 4830 to 5268 444 to 7       438/444
(98 %)
0 diff
(100 %id)
AW138485   .a 4835 to 5272 455 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 438/439
(99 %)
4 diff
(99.1 %id)
AI571879 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 4837 to 5266 429 to 1       429/429
(100 %)
1 diff
(99.8 %id)
R31773 placenta .a 4840 to 5052 213 to 1   fully sequenced,   213/213
(100 %)
0 diff
(100 %id)
N34349 melanocyte .a 4856 to 5269 413 to 1       413/413
(100 %)
1 diff
(99.8 %id)
H29330 whole brain .a 4857 to 5274 436 to 5       432/436
(99 %)
0 diff
(100 %id)
AI657166 Prostate .a 4857 to 5274 421 to 5       417/421
(99 %)
0 diff
(100 %id)
AI670709 Kidney .a 4863 to 5266 403 to 1       403/403
(100 %)
1 diff
(99.8 %id)
N40458 multiple sclerosis lesions .a 4866 to 5272 427 to 1       427/427
(100 %)
15 diff
(96.5 %id)
H29331 whole brain .a 4874 to 5269 414 to 11   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 404/404
(100 %)
14 diff
(96.6 %id)
AW242749 Kidney .a 4882 to 5272 394 to 1       394/394
(100 %)
11 diff
(97.3 %id)
AA781860   .a 4884 to 5248 365 to 1       365/365
(100 %)
0 diff
(100 %id)
AI804214 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4890 to 5267 378 to 1       378/378
(100 %)
0 diff
(100 %id)
BM786057 stomach .a 4897 to 5266 1 to 369   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 369/369
(100 %)
1 diff
(99.8 %id)
EH309255   .a 4901 to 4978 1 to 77       77/77
(100 %)
1 diff
(98.8 %id)
H29562 whole brain .a 4902 to 5269 387 to 12   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 376/452
(83 %)
12 diff
(97.4 %id)
BF593359 Kidney .a 4903 to 5272 370 to 1       370/370
(100 %)
1 diff
(99.8 %id)
AI350718 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4906 to 5265 359 to 1       359/359
(100 %)
1 diff
(99.8 %id)
R34156 placenta .a 4911 to 5269 43 to 412       370/413
(89 %)
24 diff
(94.2 %id)
AA653649   .a 4921 to 5268 352 to 5       348/352
(98 %)
0 diff
(100 %id)
AA459935   .a 4925 to 5269 345 to 1       345/345
(100 %)
0 diff
(100 %id)
R45353 whole brain .a 4930 to 5274 356 to 5       352/421
(83 %)
0 diff
(100 %id)
BE085944 breast .a 4935 to 5181 23 to 265       243/266
(91 %)
7 diff
(97.4 %id)
AI868810 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4939 to 5265 326 to 1       326/326
(100 %)
2 diff
(99.4 %id)
AW073937 2 pooled high-grade transitional celltumors, genitourinary tract .a 4944 to 5272 350 to 21   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 330/330
(100 %)
5 diff
(98.5 %id)
AI350573   .a 4959 to 5270 313 to 3       311/313
(99 %)
0 diff
(100 %id)
AI217095 heart .a 4975 to 5274 306 to 8       299/306
(97 %)
0 diff
(100 %id)
R45496 whole brain .a 4983 to 5272 315 to 21   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 295/308
(95 %)
9 diff
(97.1 %id)
AI568142 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5027 to 5266 239 to 1       239/239
(100 %)
1 diff
(99.6 %id)
AA831273 germinal center B cell .a 5043 to 5272 239 to 11   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 229/229
(100 %)
1 diff
(99.6 %id)
DB530061 hippocampus .a 5048 to 5269 1 to 222     Submitted on the opposite strand 222/222
(100 %)
8 diff
(96.4 %id)
Z38320 brain, total brain .a 5057 to 5272 215 to 1       215/224
(95 %)
0 diff
(100 %id)
AA770433   .a 5058 to 5268 212 to 2       211/212
(99 %)
0 diff
(100 %id)
BQ448039 Knee, Osteoarthritic Cartilage .a 5103 to 5272 188 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 170/170
(100 %)
0 diff
(100 %id)
DB544605 hippocampus .a 5129 to 5269 4 to 148     Submitted on the opposite strand 145/148
(97 %)
6 diff
(96.0 %id)
D26033   .a 5181 to 5274 1 to 94     Submitted on the opposite strand 94/95
(98 %)
1 diff
(99.0 %id)
BQ380128 uterus_tumor .b 1 to 261 270 to 9   tiling clone,   262/270
(97 %)
0 diff
(100 %id)
H01761 placenta .b 125 to 422 1 to 300   tiling clone, fully sequenced,   300/300
(100 %)
2 diff
(99.4 %id)
BX110295 pooled .b 126 to 592 1 to 468       468/468
(100 %)
2 diff
(99.6 %id)
BQ024153 placenta .b 154 to 604 495 to 44   AAA   452/477
(94 %)
0 diff
(100 %id)
AI741240 pooled .b 166 to 604 483 to 44   AAA   440/465
(94 %)
0 diff
(100 %id)
DB040180 testis .b 174 to 752 2 to 580   tiling clone, to resequence, capped   579/579
(100 %)
1 diff
(99.9 %id)
AA937200 pooled .b 208 to 604 441 to 45   AAA   397/422
(94 %)
0 diff
(100 %id)
H01015 placenta .b 392 to 606 215 to 1   fully sequenced,   215/215
(100 %)
8 diff
(96.3 %id)
BX952353   .b 742 to 1178 1 to 437   tiling clone,   437/437
(100 %)
1 diff
(99.8 %id)
AI298869 carcinoid, lung .b 969 to 1186 1 to 218   tiling clone, Submitted on the opposite strand 218/218
(100 %)
0 diff
(100 %id)
DB337765 testis .b 1882 to 2406 525 to 1   tiling clone, to resequence,   525/525
(100 %)
2 diff
(99.7 %id)
AK026381 human small intestine .c 1 to 1109 1 to 1109   tiling clone, available from FLJ, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1109/1131
(98 %)
2 diff
(99.9 %id)
DA648564   .c 986 to 1532 2 to 548   tiling clone, capped   547/547
(100 %)
4 diff
(99.3 %id)
TI_1948135614   .d 1 to 796 108 to 907   tiling clone,   800/1190
(67 %)
15 diff
(98.8 %id)
TI_1948135615   .d 1 to 802 122 to 922       801/1370
(58 %)
27 diff
(98.1 %id)
TI_1948135968   .d 1 to 858 110 to 968 V2T Q4K V5L V6A X7W ...     828/1188
(69 %)
43 diff
(96.4 %id)
TI_1948135969   .d 1 to 792 120 to 914       795/1425
(55 %)
17 diff
(98.9 %id)
TI_1948136674   .d 1 to 741 111 to 860       750/1283
(58 %)
25 diff
(98.1 %id)
TI_1948136675   .d 1 to 796 116 to 913       798/1349
(59 %)
26 diff
(98.1 %id)
BP356095   .e 1 to 581 1 to 581   tiling clone,   581/581
(100 %)
1 diff
(99.9 %id)
CD655193 Embryonic Stem cells .e 220 to 999 12 to 784   tiling clone,   773/812
(95 %)
20 diff
(97.6 %id)
AA115809 colon, tumor .e 978 to 1308 1 to 332   tiling clone,   332/332
(100 %)
1 diff
(99.7 %id)
FN126834 breast carcinoma .e 1083 to 1203 119 to 1   tiling clone, Submitted on the opposite strand 119/119
(100 %)
2 diff
(98.4 %id)
AA115810 colon, tumor .e 1779 to 2228 452 to 1   tiling clone,   452/452
(100 %)
2 diff
(99.6 %id)
CN353773 embryonic stem cells, cell lines H1, H7, andH9 .f 1 to 685 1 to 684 N140K M141R L142* tiling clone,   684/684
(100 %)
3 diff
(99.6 %id)
FN138817 breast carcinoma .g 1 to 101 101 to 1   tiling clone, Submitted on the opposite strand 101/101
(100 %)
0 diff
(100 %id)
BM766153 stomach .g 75 to 669 1 to 595       595/595
(100 %)
0 diff
(100 %id)
BM772171 stomach .g 75 to 677 1 to 603   tiling clone,   603/603
(100 %)
0 diff
(100 %id)
BX506564 Liver .h 1 to 689 1 to 689   tiling clone,   689/689
(100 %)
0 diff
(100 %id)
BF773029 epid_tumor .h 602 to 975 1 to 370   tiling clone,   370/370
(100 %)
12 diff
(96.8 %id)
DB074074 testis .h 628 to 1166 2 to 543   tiling clone, capped   542/542
(100 %)
4 diff
(99.3 %id)
AL599731   .h 745 to 1070 15 to 340       326/340
(95 %)
7 diff
(98.0 %id)
T19209   .h 876 to 1267 392 to 1     Submitted on the opposite strand 392/397
(98 %)
1 diff
(99.8 %id)
BX648892 human salivary gland .h 1069 to 6886 1 to 5817 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 5817/5817
(100 %)
2 diff
(100.0 %id)
BX643660   .h 1220 to 1839 1 to 620       620/620
(100 %)
0 diff
(100 %id)
GD144362   .h 1500 to 1575 76 to 1     Submitted on the opposite strand 76/84
(90 %)
4 diff
(95.3 %id)
AK090880 amygdala .h 1517 to 4594 1 to 3076 exact available from FLJ,   3076/3076
(100 %)
8 diff
(99.8 %id)
AX746662   .h 1517 to 4594 1 to 3076 exact     3076/3076
(100 %)
8 diff
(99.8 %id)
DA151637 amygdala .h 1518 to 2099 2 to 584   capped   583/583
(100 %)
5 diff
(99.2 %id)
BX480734   .h 1649 to 2321 17 to 688   tiling clone,   672/688
(97 %)
6 diff
(99.2 %id)
DA571610 whole embryo, mainly head .h 1970 to 2780 2 to 810   capped   809/809
(100 %)
5 diff
(99.4 %id)
DN998994 bone marrow .h 2126 to 2877 1 to 748       748/748
(100 %)
9 diff
(98.8 %id)
DA102208 cerebellum .h 2398 to 2981 2 to 579   capped   578/578
(100 %)
4 diff
(99.4 %id)
TI_159723690   .h 2586 to 3429 911 to 82 exact AAA   830/967
(85 %)
20 diff
(98.0 %id)
FN061682 breast carcinoma .h 2780 to 2896 119 to 2     Submitted on the opposite strand 118/119
(99 %)
0 diff
(100 %id)
CA945206 Human Lung Epithelial cells, lung .h 2784 to 3429 664 to 19 exact AAA   646/646
(100 %)
0 diff
(100 %id)
DB358481 whole embryo, mainly head .h 2881 to 3429 552 to 1 T4P R7W L8F H9S K10P ...     552/552
(100 %)
10 diff
(98.2 %id)
DB340409 testis .h 4035 to 4594 561 to 1       561/561
(100 %)
2 diff
(99.7 %id)
DB301734 amygdala .h 4055 to 4594 540 to 1       540/540
(100 %)
1 diff
(99.9 %id)
CN353778 embryonic stem cells, cell lines H1, H7, andH9 .i 1 to 527 1 to 528 V100G I101D I102H D103R S104F ... tiling clone,   528/528
(100 %)
1 diff
(99.9 %id)
N95487 multiple sclerosis lesions .j-u 1 to 439 1 to 440       440/440
(100 %)
9 diff
(98.0 %id)
BX089958 multiple sclerosis lesions .j-u 2 to 706 1 to 704   tiling clone,   704/704
(100 %)
3 diff
(99.6 %id)
BQ024415 placenta .j-u 282 to 655 374 to 1       374/374
(100 %)
3 diff
(99.2 %id)
FN099823 breast carcinoma .j-u 560 to 635 73 to 1     Submitted on the opposite strand 73/73
(100 %)
3 diff
(95.9 %id)
N63395 multiple sclerosis lesions .j-u 663 to 1190 531 to 1 R36X V37C tiling clone,   531/532
(99 %)
9 diff
(98.4 %id)
DW464975 Liver .k-u 1 to 343 359 to 17 exact tiling clone,   343/361
(95 %)
0 diff
(100 %id)
AL600478   Gene FAR1, variant not shown              
BP341268 stomach mucosa Gene FAR1, variant not shown         Suspected internal deletion, this clone was ignored    
DB314154 tongue, tumor tissue Gene FAR1, variant not shown         Suspected internal deletion, this clone was ignored    
DA448969 tongue, tumor tissue Gene FAR1, variant not shown       capped Suspected internal deletion, this clone was ignored    
BI458927 testis Gene FAR1, variant not shown         This clone was ignored    
DB326760 brain Gene FAR1, variant not shown         This clone was ignored    
DA797359 brain Gene FAR1, variant not shown       capped This clone was ignored    
DB047673 testis Gene FAR1, variant not shown       capped This clone was ignored    
DB234891 trachea Gene FAR1, variant not shown       capped      
DB350229 trachea Gene FAR1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI