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Gene MLLTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
434 representative clones for gene MLL back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
D14540   .a 1 to 5751 1 to 5751   tiling clone,   5751/5751
(100 %)
0 diff
(100 %id)
NM_005933.2   .a 1 to 14982 1 to 14982 exact RefSeq,   14982/14982
(100 %)
0 diff
(100 %id)
L04284   .a 24 to 11933 1 to 11910       11910/11910
(100 %)
4 diff
(100.0 %id)
AW978326   .a 249 to 907 1 to 659       659/670
(98 %)
7 diff
(99.0 %id)
AI927347 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 255 to 737 1 to 483     Submitted on the opposite strand 483/483
(100 %)
0 diff
(100 %id)
BE504234 carcinoid, lung .a 255 to 524 1 to 270     Submitted on the opposite strand 270/270
(100 %)
0 diff
(100 %id)
BF057352 fibrotheoma, ovary .a 255 to 986 1 to 732     Submitted on the opposite strand 732/732
(100 %)
16 diff
(97.9 %id)
TI_154133336   .a 255 to 978 56 to 784     Submitted on the opposite strand 729/1083
(67 %)
22 diff
(98.0 %id)
AW575768 lymph .a 256 to 722 1 to 467     Submitted on the opposite strand 467/467
(100 %)
0 diff
(100 %id)
BF436728 fibrotheoma, ovary .a 256 to 833 1 to 578     Submitted on the opposite strand 578/578
(100 %)
0 diff
(100 %id)
CD621397   .a 450 to 515 66 to 1       66/74
(89 %)
3 diff
(96.0 %id)
AF024540   .a 454 to 609 73 to 228       156/228
(68 %)
6 diff
(97.4 %id)
AY187942   .a 454 to 651 110 to 307       198/307
(64 %)
6 diff
(98.1 %id)
AI630594 blood .a 572 to 913 342 to 1       342/343
(99 %)
0 diff
(100 %id)
AA055156 heart .a 688 to 1064 1 to 379       379/379
(100 %)
2 diff
(99.5 %id)
CT004794 T-Lymphocytes .a 731 to 1499 1 to 770       770/770
(100 %)
4 diff
(99.5 %id)
AA259093 germinal center B cell .a 737 to 1173 436 to 1     Submitted on the opposite strand 436/436
(100 %)
1 diff
(99.8 %id)
DA784644 brain .a 747 to 1345 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
CD656863 Embryonic Stem cells .a 830 to 1582 12 to 757       746/850
(87 %)
12 diff
(98.6 %id)
BG913643 anaplastic oligodendroglioma with 1p/19qloss, brain .a 872 to 1502 842 to 209     Submitted on the opposite strand 634/969
(65 %)
0 diff
(100 %id)
H97183 melanocyte .a 875 to 1018 150 to 8     Submitted on the opposite strand 143/150
(95 %)
0 diff
(100 %id)
CN340985 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 994 to 1699 1 to 704       704/704
(100 %)
2 diff
(99.8 %id)
AW361466 colon .a 1207 to 1615 410 to 2       409/410
(99 %)
0 diff
(100 %id)
AA262056 germinal center B cell .a 1232 to 1709 485 to 5     Submitted on the opposite strand 481/485
(99 %)
0 diff
(100 %id)
DR980233 placenta .a 1253 to 1649 1 to 396   AAA Submitted on the opposite strand 396/396
(100 %)
4 diff
(99.0 %id)
AA232867 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1277 to 1700 1 to 423       423/423
(100 %)
3 diff
(99.3 %id)
BF815244 colon_ins .a 1461 to 2011 554 to 3     Submitted on the opposite strand 552/554
(99 %)
0 diff
(100 %id)
BE815674 breast_normal .a 1503 to 1749 270 to 18       253/270
(93 %)
0 diff
(100 %id)
AW898805 nervous_normal .a 1529 to 1694 166 to 1       166/166
(100 %)
1 diff
(99.4 %id)
BE676683 B-cell, chronic lymphotic leukemia .a 1533 to 2233 701 to 1       701/705
(99 %)
0 diff
(100 %id)
FN097266 breast carcinoma .a 1553 to 1661 112 to 1     Submitted on the opposite strand 112/112
(100 %)
3 diff
(97.4 %id)
BF815242 colon_ins .a 1586 to 2028 443 to 1     Submitted on the opposite strand 443/443
(100 %)
2 diff
(99.6 %id)
BF897201 marrow .a 1636 to 1917 287 to 5     Submitted on the opposite strand 283/287
(98 %)
0 diff
(100 %id)
AA262945 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1709 to 2222 513 to 1       513/513
(100 %)
7 diff
(98.7 %id)
BF229973 colon .a 1793 to 2356 573 to 10       564/580
(97 %)
11 diff
(98.2 %id)
AA009464 heart .a 1868 to 2220 1 to 352   fully sequenced,   352/352
(100 %)
1 diff
(99.8 %id)
AA009746 heart .a 1946 to 2222 277 to 1   fully sequenced,   277/277
(100 %)
0 diff
(100 %id)
AA055040 heart .a 1972 to 2222 252 to 1       252/252
(100 %)
1 diff
(99.7 %id)
AA702494 liver and spleen .a 2010 to 2686 678 to 1       678/678
(100 %)
17 diff
(97.5 %id)
BF969710 adrenal cortex carcinoma, cell line, adrenal gland .a 2299 to 3084 1 to 790       790/790
(100 %)
16 diff
(98.0 %id)
AB209508 brain .a 2456 to 13678 1 to 11222   tiling clone,   11222/11222
(100 %)
2 diff
(100.0 %id)
BF962402 nervous_normal .a 2456 to 2974 523 to 6       518/524
(98 %)
0 diff
(100 %id)
BF960614 nervous_normal .a 2511 to 2978 470 to 3       468/470
(99 %)
0 diff
(100 %id)
BQ312339 breast_normal .a 2624 to 2789 167 to 4       164/187
(87 %)
0 diff
(100 %id)
CR999522 T-Lymphocytes .a 2658 to 3467 1 to 811       811/814
(99 %)
2 diff
(99.8 %id)
AF272382   .a 2805 to 3648 40 to 884       845/947
(89 %)
8 diff
(99.2 %id)
BI855691 breast, mammary adenocarcinoma, cell line .a 2825 to 3706 1 to 882       882/959
(91 %)
21 diff
(97.9 %id)
TI_57186330   .a 2825 to 3706 53 to 934       882/959
(91 %)
21 diff
(97.9 %id)
AA136248 lung, lung carcinoma .a 2907 to 3343 1 to 437       437/437
(100 %)
0 diff
(100 %id)
BC127775 PCR rescued clones, C list .a 2959 to 3180 235 to 14     Submitted on the opposite strand 222/243
(91 %)
0 diff
(100 %id)
TI_154151808   .a 3020 to 3657 735 to 100     Submitted on the opposite strand 635/672
(94 %)
32 diff
(95.3 %id)
TI_154152041   .a 3154 to 3627 554 to 80     Submitted on the opposite strand 475/476
(99 %)
7 diff
(98.6 %id)
AI377909 pooled .a 3166 to 3662 497 to 1       497/497
(100 %)
0 diff
(100 %id)
AI522083 Kidney .a 3209 to 3662 454 to 1       454/454
(100 %)
0 diff
(100 %id)
BF757726 colon .a 3262 to 3449 189 to 1     Submitted on the opposite strand 189/189
(100 %)
8 diff
(95.8 %id)
BU430602 lymph .a 3269 to 3629 366 to 6     Submitted on the opposite strand 361/366
(98 %)
0 diff
(100 %id)
H95684 pineal gland .a 3367 to 3649 283 to 1     Submitted on the opposite strand 283/283
(100 %)
2 diff
(99.3 %id)
EC529690 Prostate .a 3388 to 3504 116 to 1       116/116
(100 %)
1 diff
(99.2 %id)
CF137005 lymph .a 3424 to 3625 210 to 8     Submitted on the opposite strand 203/210
(96 %)
2 diff
(99.1 %id)
FN101841 breast carcinoma .a 3604 to 3662 1 to 59       59/59
(100 %)
0 diff
(100 %id)
FM165198   .a 3652 to 4183 83 to 614       532/614
(86 %)
6 diff
(99.1 %id)
AI085657 anaplastic oligodendroglioma, brain .a 3670 to 4099 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AF422798   .a 3771 to 4116 1 to 346       346/496
(69 %)
3 diff
(99.4 %id)
AY187921   .a 3771 to 4355 1 to 585       585/698
(83 %)
2 diff
(99.8 %id)
S67825   .a 3771 to 4355 1 to 585       585/832
(70 %)
2 diff
(99.8 %id)
FM165195   .a 3850 to 4109 1 to 260       260/400
(65 %)
1 diff
(99.8 %id)
AF231998   .a 3930 to 4355 1 to 426       426/815
(52 %)
3 diff
(99.7 %id)
AF232000   .a 3930 to 4445 1 to 515       515/568
(90 %)
11 diff
(98.1 %id)
AF272370   .a 3930 to 4317 1 to 388       388/456
(85 %)
2 diff
(99.6 %id)
AF272375   .a 3930 to 4241 1 to 312       312/605
(51 %)
2 diff
(99.7 %id)
AF272377   .a 3930 to 4046 1 to 118       118/185
(63 %)
7 diff
(96.3 %id)
AF272378   .a 3930 to 4250 1 to 321       321/389
(82 %)
6 diff
(98.5 %id)
AF297746   .a 3930 to 4247 1 to 318       318/727
(43 %)
4 diff
(99.5 %id)
GU353067   .a 3939 to 4147 1 to 209       209/362
(57 %)
1 diff
(99.8 %id)
L01986   .a 3970 to 7008 1 to 3039       3039/3039
(100 %)
2 diff
(100.0 %id)
DQ451148   .a 3985 to 4110 1 to 126       126/215
(58 %)
1 diff
(99.6 %id)
AF272374   .a 3996 to 4250 1 to 254       254/366
(69 %)
6 diff
(98.4 %id)
AY187944   .a 4002 to 4247 1 to 246       246/423
(58 %)
3 diff
(99.3 %id)
AF231995   .a 4022 to 4241 1 to 220       220/409
(53 %)
1 diff
(99.8 %id)
AY187920   .a 4035 to 4363 1 to 329       329/365
(90 %)
7 diff
(98.1 %id)
AF061154   .a 4071 to 4242 1 to 172       172/247
(69 %)
1 diff
(99.6 %id)
AF272383   .a 4071 to 4241 1 to 171       171/335
(51 %)
1 diff
(99.8 %id)
AF272384   .a 4071 to 4355 1 to 285       285/449
(63 %)
1 diff
(99.8 %id)
AF297749   .a 4071 to 4364 1 to 294       294/472
(62 %)
6 diff
(98.8 %id)
FM165196   .a 4107 to 4246 1 to 140       140/224
(62 %)
2 diff
(99.2 %id)
FM165194   .a 4108 to 4290 43 to 225       183/225
(81 %)
6 diff
(97.4 %id)
S78571   .a 4242 to 4355 1 to 114       114/114
(100 %)
0 diff
(100 %id)
S66432   .a 4284 to 4643 1 to 360       360/360
(100 %)
0 diff
(100 %id)
DQ299936   .a 4348 to 4574 183 to 409       227/409
(55 %)
6 diff
(98.6 %id)
DQ437655   .a 4354 to 4564 117 to 327       211/327
(64 %)
6 diff
(98.2 %id)
AF492830   .a 4498 to 4905 141 to 548       408/548
(74 %)
6 diff
(99.0 %id)
BE815797 breast_normal .a 4786 to 4893 114 to 7       108/125
(86 %)
2 diff
(98.4 %id)
T05749   .a 5086 to 5400 1 to 315       315/315
(100 %)
0 diff
(100 %id)
AL712116 human skeletal muscle .a 6078 to 6716 1 to 639       639/639
(100 %)
1 diff
(99.9 %id)
BU159832 eye, retinoblastoma .a 6178 to 7067 1 to 888       888/889
(99 %)
11 diff
(98.8 %id)
DA810280 brain .a 6232 to 6790 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BE838177 prostate_normal .a 6238 to 6616 378 to 1       378/382
(98 %)
18 diff
(95.3 %id)
BF944387 nervous_normal .a 6449 to 6737 311 to 23     Submitted on the opposite strand 289/326
(88 %)
0 diff
(100 %id)
AL706777 human skeletal muscle .a 6760 to 7477 1 to 718       718/718
(100 %)
0 diff
(100 %id)
DA781660 brain .a 6803 to 7375 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
CF142840 lymph .a 6987 to 7686 1 to 700       700/700
(100 %)
6 diff
(99.2 %id)
TI_154173949   .a 6992 to 7954 93 to 1048       956/1124
(85 %)
50 diff
(95.6 %id)
AA732353 germinal center B cell .a 7712 to 8245 544 to 11   AAA   534/534
(100 %)
2 diff
(99.7 %id)
CT000927 T-Lymphocytes .a 8082 to 8881 1 to 801       801/801
(100 %)
2 diff
(99.8 %id)
AW993159 breast_normal .a 8307 to 8573 268 to 3     Submitted on the opposite strand 266/273
(97 %)
0 diff
(100 %id)
DA524924 brain .a 8316 to 8874 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BX642676   .a 8498 to 9126 1 to 629       629/629
(100 %)
3 diff
(99.6 %id)
AK303179 thymus .a 8527 to 11008 1 to 2482       2482/2483
(99 %)
3 diff
(99.9 %id)
BQ049637 lymph, lymphoma, cell line .a 8552 to 9526 1 to 984       984/1031
(95 %)
21 diff
(98.0 %id)
DA094145 cerebellum .a 8706 to 9268 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AL710115 human skeletal muscle .a 8722 to 9195 1 to 474       474/474
(100 %)
0 diff
(100 %id)
BF742919 breast .a 8772 to 9181 410 to 1     Submitted on the opposite strand 410/410
(100 %)
2 diff
(99.6 %id)
BF083048 colon_est .a 8942 to 9438 505 to 11       495/505
(98 %)
0 diff
(100 %id)
CN345520 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 9085 to 9584 1 to 500       500/500
(100 %)
0 diff
(100 %id)
CN345514 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 9098 to 9584 1 to 487       487/487
(100 %)
0 diff
(100 %id)
CD652863 Embryonic Stem cells .a 9146 to 9960 11 to 820       810/821
(98 %)
15 diff
(98.2 %id)
CD621418   .a 9189 to 9946 1 to 753       753/753
(100 %)
7 diff
(99.1 %id)
T06723   .a 9282 to 9626 347 to 1       347/355
(97 %)
6 diff
(98.4 %id)
CD621414   .a 9296 to 10045 757 to 1       757/757
(100 %)
8 diff
(99.0 %id)
AA527822   .a 9316 to 9720 405 to 1       405/405
(100 %)
1 diff
(99.8 %id)
CD621419   .a 9339 to 10020 686 to 1       686/686
(100 %)
6 diff
(99.2 %id)
M78478   .a 9362 to 9705 1 to 344       344/344
(100 %)
0 diff
(100 %id)
AW956091   .a 9401 to 9863 464 to 1     Submitted on the opposite strand 464/465
(99 %)
20 diff
(95.7 %id)
BQ334530 marrow .a 9518 to 9757 250 to 11       240/262
(91 %)
0 diff
(100 %id)
BM991963 Bone, Subchondral Bone .a 9596 to 10149 18 to 571     Submitted on the opposite strand 554/571
(97 %)
6 diff
(99.0 %id)
CR999094 T-Lymphocytes .a 9605 to 10477 1 to 875       875/875
(100 %)
5 diff
(99.5 %id)
CD621399   .a 9709 to 10044 336 to 1       336/336
(100 %)
1 diff
(99.8 %id)
CD621403   .a 9709 to 10042 334 to 1       334/334
(100 %)
1 diff
(99.8 %id)
CD621405   .a 9709 to 10033 324 to 1       324/324
(100 %)
6 diff
(98.2 %id)
CD621407   .a 9709 to 10045 338 to 1       338/338
(100 %)
1 diff
(99.8 %id)
CD621408   .a 9709 to 10044 337 to 1       337/337
(100 %)
2 diff
(99.5 %id)
CD621411   .a 9709 to 10045 337 to 1       337/337
(100 %)
0 diff
(100 %id)
CD621412   .a 9709 to 10045 337 to 1       337/337
(100 %)
1 diff
(99.8 %id)
CD621416   .a 9709 to 10045 337 to 1       337/337
(100 %)
0 diff
(100 %id)
CD621420   .a 9709 to 10041 328 to 1       328/328
(100 %)
6 diff
(98.2 %id)
AU140663 placenta .a 9806 to 10608 2 to 799   capped   798/798
(100 %)
11 diff
(98.7 %id)
CD621401   .a 9881 to 10039 159 to 1       159/166
(95 %)
0 diff
(100 %id)
BQ355698 head_neck .a 10064 to 10370 307 to 2       306/307
(99 %)
0 diff
(100 %id)
BP217858 caudate nucleus .a 10172 to 10754 1 to 583       583/583
(100 %)
0 diff
(100 %id)
AL134544 brain .a 10234 to 10842 1 to 609       609/609
(100 %)
0 diff
(100 %id)
DB153409 thymus .a 10295 to 10821 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
BX505421   .a 10419 to 11056 1 to 642       642/642
(100 %)
4 diff
(99.4 %id)
BX643798   .a 10478 to 11242 1 to 765       765/765
(100 %)
3 diff
(99.7 %id)
DA860601 placenta .a 10639 to 11203 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA300937 hippocampus .a 10645 to 11203 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AK295635 hippocampus .a 10724 to 12132 1 to 1409       1409/1409
(100 %)
0 diff
(100 %id)
DC332684 hippocampus .a 10724 to 11287 1 to 564       564/564
(100 %)
0 diff
(100 %id)
CN345518 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 10731 to 11391 1 to 661       661/661
(100 %)
0 diff
(100 %id)
AA837477 germinal center B cell .a 10757 to 11406 747 to 99   AAA   649/785
(82 %)
23 diff
(97.1 %id)
DA666066   .a 10919 to 11474 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA804023 brain .a 10947 to 11485 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA436631 tongue, tumor tissue .a 11005 to 11581 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA248753 brain .a 11041 to 11637 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
BE079690 breast .a 11067 to 11388 326 to 10     Submitted on the opposite strand 317/326
(97 %)
4 diff
(98.8 %id)
BE079691 breast .a 11067 to 11386 327 to 12     Submitted on the opposite strand 316/327
(96 %)
3 diff
(99.1 %id)
BE079693 breast .a 11067 to 11356 287 to 1     Submitted on the opposite strand 287/287
(100 %)
6 diff
(98.0 %id)
AL040465 testis .a 11230 to 11656 1 to 427       427/427
(100 %)
0 diff
(100 %id)
DA799752 brain .a 11265 to 11809 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA236899 brain .a 11387 to 11921 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
CN345519 embryonic stem cells, cell lines H1, H7, andH9 .a 11387 to 12034 1 to 648       648/648
(100 %)
0 diff
(100 %id)
DC322511 brain .a 11501 to 12153 1 to 653       653/653
(100 %)
1 diff
(99.9 %id)
CN345515 embryonic stem cells, cell lines H1, H7, andH9 .a 11577 to 12170 1 to 594       594/594
(100 %)
0 diff
(100 %id)
CN345516 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 11824 to 12235 1 to 412       412/412
(100 %)
0 diff
(100 %id)
BF897157 marrow .a 12120 to 12650 563 to 15     Submitted on the opposite strand 549/563
(97 %)
0 diff
(100 %id)
BF919316 nervous_tumor .a 12120 to 12650 563 to 15     Submitted on the opposite strand 549/563
(97 %)
0 diff
(100 %id)
FN112422 breast carcinoma .a 12184 to 12289 104 to 1     Submitted on the opposite strand 104/105
(99 %)
4 diff
(96.2 %id)
CX870419 embryonic stem .a 12201 to 13013 1 to 813       813/813
(100 %)
1 diff
(99.9 %id)
CN312741 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 12212 to 12837 1 to 627       627/627
(100 %)
2 diff
(99.7 %id)
BI199134 brain, neuroblastoma .a 12233 to 12927 1 to 701   tiling clone,   701/702
(99 %)
10 diff
(98.6 %id)
BF315121 brain, neuroblastoma .a 12234 to 12914 1 to 678       678/997
(68 %)
15 diff
(98.5 %id)
BE910401 epithelioid carcinoma, Pancreas .a 12251 to 13017 1 to 761       761/904
(84 %)
35 diff
(96.2 %id)
BU538418 adenocarcinoma, cell line, breast .a 12349 to 13282 1 to 940       940/942
(99 %)
21 diff
(97.8 %id)
BU956987 adenocarcinoma, cell line, breast .a 12349 to 13182 1 to 843       843/871
(96 %)
20 diff
(97.8 %id)
BI869416 adenocarcinoma, cell line, Liver .a 12370 to 13195 1 to 839       839/840
(99 %)
22 diff
(97.4 %id)
BF817461 colon_ins .a 12461 to 12720 276 to 17     Submitted on the opposite strand 260/276
(94 %)
0 diff
(100 %id)
BQ720824 sympathetic trunk .a 12476 to 13297 1 to 832       832/935
(88 %)
33 diff
(96.5 %id)
BM710657 eye, fetal eyes .a 12479 to 12623 1 to 145       145/145
(100 %)
0 diff
(100 %id)
BI016128 lung_tumor .a 12520 to 12648 139 to 12       128/139
(92 %)
0 diff
(100 %id)
BG779769 adenocarcinoma, Prostate .a 12658 to 13436 1 to 778       778/778
(100 %)
14 diff
(98.3 %id)
BI333279 cervical carcinoma cell line, cervix .a 12667 to 13339 1 to 674       674/674
(100 %)
1 diff
(99.9 %id)
AA376666 small intestine .a 12718 to 12861 1 to 144       144/144
(100 %)
0 diff
(100 %id)
DA825467 pericardium .a 12823 to 13391 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
CN312743 embryonic stem cells, cell lines H1, H7, andH9 .a 12824 to 13524 1 to 701       701/701
(100 %)
2 diff
(99.8 %id)
CX866949 embryonic stem .a 12869 to 13724 1 to 855       855/855
(100 %)
1 diff
(99.9 %id)
BU634405 cell lines, Chondrosarcoma .a 12937 to 13677 757 to 19   AAA   739/739
(100 %)
2 diff
(99.8 %id)
DA569294 whole embryo, mainly head .a 12942 to 13684 2 to 743   capped   742/750
(98 %)
7 diff
(99.1 %id)
TI_149273350   .a 13015 to 13679 759 to 95   AAA   665/999
(66 %)
0 diff
(100 %id)
BU675755 lung, Primary Lung Epithelial Cells .a 13015 to 13679 683 to 19   AAA   665/673
(98 %)
0 diff
(100 %id)
DA322711 hippocampus .a 13017 to 13512 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
BU631497 cell lines, Chondrosarcoma .a 13024 to 13677 672 to 19   AAA   654/654
(100 %)
0 diff
(100 %id)
DA733943   .a 13216 to 13965 2 to 746   capped   745/751
(99 %)
9 diff
(98.9 %id)
DB120223 thymus .a 13226 to 13751 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
BX109966 liver and spleen .a 13274 to 13968 1 to 696       696/696
(100 %)
2 diff
(99.8 %id)
DB477796.
matches multiple genes
hippocampus .a 13330 to 13803 1 to 474     also hits gene sheena 474/474
(100 %)
0 diff
(100 %id)
FN060316 breast carcinoma .a 13335 to 13423 86 to 1     Submitted on the opposite strand 86/87
(98 %)
2 diff
(97.8 %id)
AL704935 human skeletal muscle .a 13358 to 14024 1 to 667       667/667
(100 %)
2 diff
(99.8 %id)
BQ942235 sciatic nerve .a 13374 to 14254 1 to 885       885/886
(99 %)
7 diff
(99.3 %id)
AA283139 germinal center B cell .a 13394 to 13849 1 to 456       456/456
(100 %)
3 diff
(99.4 %id)
BM988722 lung, Lung Focal Fibrosis .a 13444 to 13930 1 to 487     Submitted on the opposite strand 487/487
(100 %)
5 diff
(99.0 %id)
DB181412 liver, tumor tissue .a 13448 to 14014 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA568351 whole embryo, mainly head .a 13457 to 14217 2 to 771   capped   770/773
(99 %)
20 diff
(97.5 %id)
AA463620 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 13477 to 13955 1 to 479       479/479
(100 %)
0 diff
(100 %id)
DA647294 mammary gland .a 13478 to 14306 2 to 830   capped   829/829
(100 %)
6 diff
(99.3 %id)
BG289410 bladder, transitional cell papilloma, cell line .a 13499 to 14282 1 to 774       774/835
(92 %)
26 diff
(96.9 %id)
BF195717 fibrotheoma, ovary .a 13554 to 14059 1 to 506     Submitted on the opposite strand 506/506
(100 %)
0 diff
(100 %id)
TI_149273611   .a 13600 to 14467 941 to 84   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 858/1014
(84 %)
19 diff
(98.2 %id)
BX505250   .a 13619 to 14381 1 to 763       763/763
(100 %)
0 diff
(100 %id)
EB387549 eye, optic nerve .a 13678 to 14471 1 to 794   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 794/794
(100 %)
0 diff
(100 %id)
CD515847 White Matter .a 13751 to 14577 1 to 832       832/879
(94 %)
10 diff
(98.9 %id)
BU940531 mixed (pool of 40 RNAs) .a 13823 to 14576 1 to 758       758/804
(94 %)
13 diff
(98.4 %id)
AV651567 corresponding non cancerous liver tissue .a 13839 to 14275 1 to 437     Submitted on the opposite strand 437/437
(100 %)
0 diff
(100 %id)
AV651593 corresponding non cancerous liver tissue .a 13839 to 14279 1 to 441     Submitted on the opposite strand 441/441
(100 %)
0 diff
(100 %id)
AI701430 carcinoid, lung .a 13853 to 14474 622 to 1       622/622
(100 %)
1 diff
(99.9 %id)
BU675936 lung, Primary Lung Epithelial Cells .a 13870 to 14467 616 to 19   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 598/598
(100 %)
0 diff
(100 %id)
CN312742 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 13884 to 14527 1 to 644       644/644
(100 %)
3 diff
(99.6 %id)
CK902493 Pancreas, Purified pancreatic islet .a 13884 to 14470 591 to 5     Submitted on the opposite strand 587/591
(99 %)
0 diff
(100 %id)
BU076214 Pancreas, Purified pancreatic islet .a 13908 to 14466 559 to 1       559/559
(100 %)
0 diff
(100 %id)
AW173345 pooled .a 13931 to 14472 542 to 1       542/542
(100 %)
0 diff
(100 %id)
DA166191 amygdala .a 13986 to 14560 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
AI742495 pooled .a 13991 to 14476 486 to 1       486/486
(100 %)
0 diff
(100 %id)
AA767185 germinal center B cell .a 14006 to 14468 463 to 1       463/463
(100 %)
0 diff
(100 %id)
AI360015 anaplastic oligodendroglioma, brain .a 14008 to 14467 460 to 1       460/460
(100 %)
0 diff
(100 %id)
AW169267 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 14010 to 14467 458 to 1       458/458
(100 %)
0 diff
(100 %id)
GD135942   .a 14020 to 14139 125 to 6     Submitted on the opposite strand 120/136
(88 %)
0 diff
(100 %id)
AA282910 germinal center B cell .a 14022 to 14468 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AI049796   .a 14026 to 14471 446 to 1       446/446
(100 %)
0 diff
(100 %id)
AI369737 anaplastic oligodendroglioma, brain .a 14049 to 14467 419 to 1       419/419
(100 %)
0 diff
(100 %id)
BF110880 carcinoid, lung .a 14059 to 14470 412 to 1       412/412
(100 %)
0 diff
(100 %id)
TI_154126089   .a 14083 to 14485 48 to 450     Submitted on the opposite strand 403/1044
(38 %)
3 diff
(99.8 %id)
AA765543 germinal center B cell .a 14093 to 14477 385 to 1       385/385
(100 %)
0 diff
(100 %id)
AA837376 germinal center B cell .a 14099 to 14487 405 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 389/389
(100 %)
0 diff
(100 %id)
AA463268 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 14145 to 14468 324 to 1       324/324
(100 %)
0 diff
(100 %id)
AA865117 germinal center B cell .a 14146 to 14380 235 to 1       235/235
(100 %)
0 diff
(100 %id)
AI872026 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 14162 to 14467 306 to 1       306/306
(100 %)
0 diff
(100 %id)
AI218302 pooled .a 14276 to 14468 193 to 1       193/193
(100 %)
0 diff
(100 %id)
AA361250   .a 14284 to 14543 1 to 260       260/260
(100 %)
0 diff
(100 %id)
GD156167   .a 14407 to 14613 212 to 8     Submitted on the opposite strand 205/213
(96 %)
0 diff
(100 %id)
GD139146   .a 14434 to 14615 184 to 4     Submitted on the opposite strand 181/185
(97 %)
0 diff
(100 %id)
BE503116 carcinoid, lung .a 14440 to 14981 1 to 541   tiling clone, Submitted on the opposite strand 541/541
(100 %)
2 diff
(99.7 %id)
AI399696 Prostate .a 14442 to 14741 1 to 300   tiling clone, Submitted on the opposite strand 300/300
(100 %)
1 diff
(99.7 %id)
L04731   .b 1 to 14257 1 to 14255 Q494E K3497N tiling clone,   14255/14255
(100 %)
8 diff
(100.0 %id)
AF232001   .b 3721 to 4891 1 to 1171       1171/1233
(94 %)
10 diff
(99.2 %id)
TI_154173631   .b 3919 to 4905 92 to 1081       989/1187
(83 %)
56 diff
(95.3 %id)
AA278154 germinal center B cell .b 14076 to 14276 1 to 201     Possibly primed on the genome, locally A rich (24/26 A in genome downstream of last aligned base) 201/201
(100 %)
0 diff
(100 %id)
AA129067   .b 14077 to 14255 1 to 179       179/180
(99 %)
1 diff
(99.5 %id)
BM457242 embryonal carcinoma, cell line, testis .b 14153 to 14978 15 to 848       834/848
(98 %)
6 diff
(99.3 %id)
BU940415 mixed (pool of 40 RNAs) .b 14164 to 14927 1 to 770   tiling clone,   770/773
(99 %)
22 diff
(97.2 %id)
BE379390 endometrium, adenocarcinoma cell line, uterus .b 14167 to 14968 46 to 859       814/903
(90 %)
38 diff
(95.8 %id)
BM714607 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 14235 to 14691 1 to 457   fully sequenced,   457/457
(100 %)
0 diff
(100 %id)
BU680680 lung, Primary Lung Epithelial Cells .b 14250 to 14895 1 to 648     Submitted on the opposite strand 648/648
(100 %)
10 diff
(98.5 %id)
TI_149284822   .b 14254 to 14916 40 to 703     Submitted on the opposite strand 664/1199
(55 %)
11 diff
(99.1 %id)
AA419591 germinal center B cell .b 14255 to 14634 1 to 380       380/380
(100 %)
0 diff
(100 %id)
CR609114 fetal brain .b 14294 to 15190 1 to 897       897/897
(100 %)
0 diff
(100 %id)
AL537900 brain, fetal brain .b 14294 to 15155 1 to 862   AAA Possibly primed on the genome, locally A rich (24/26 A in genome downstream of last aligned base) 862/862
(100 %)
0 diff
(100 %id)
TI_154124623   .b 14360 to 15171 885 to 86   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 800/963
(83 %)
35 diff
(96.4 %id)
BF370999 prostate_normal .b 14434 to 14811 378 to 2       377/385
(97 %)
0 diff
(100 %id)
BF371000 prostate_normal .b 14434 to 14811 379 to 2       378/386
(97 %)
0 diff
(100 %id)
BF373000 prostate_tumor .b 14434 to 14811 380 to 3       378/387
(97 %)
0 diff
(100 %id)
AA280085 germinal center B cell .b 14442 to 14925 1 to 483   fully sequenced,   483/483
(100 %)
1 diff
(99.8 %id)
AW848846 colon .b 14493 to 14994 501 to 1       501/501
(100 %)
11 diff
(97.9 %id)
BG993420 head_neck .b 14503 to 15071 18 to 583       566/583
(97 %)
6 diff
(99.0 %id)
TI_151710685   .b 14518 to 15204 800 to 109   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 692/890
(77 %)
19 diff
(97.9 %id)
BC015388 Duodenum, adenocarcinoma .b 14519 to 16384 1 to 1866   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1866/1866
(100 %)
0 diff
(100 %id)
BF981037 duodenal adenocarcinoma, cell line, small intestine .b 14519 to 15245 1 to 719   available from MGC,   719/719
(100 %)
15 diff
(98.0 %id)
BU789721 insulinoma, Pancreas .b 14543 to 15029 8 to 494       487/494
(98 %)
6 diff
(98.8 %id)
CA415772 Chondrosarcoma Cell line .b 14574 to 15171 608 to 12   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 597/597
(100 %)
2 diff
(99.7 %id)
BC065385 Peripheral Nervous System, sympathetictrunk .b 14576 to 16384 13 to 1821   available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1809/1809
(100 %)
2 diff
(99.9 %id)
BQ718450 sympathetic trunk .b 14576 to 15293 41 to 766   available from MGC,   726/903
(80 %)
9 diff
(99.1 %id)
DB354850 whole embryo, mainly head .b 14579 to 15164 588 to 1       588/590
(99 %)
16 diff
(97.3 %id)
BU786179 insulinoma, Pancreas .b 14583 to 15171 606 to 18   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 589/589
(100 %)
0 diff
(100 %id)
DB355915 whole embryo, mainly head .b 14597 to 15164 567 to 1       567/567
(100 %)
16 diff
(97.2 %id)
DB362161 mammary gland .b 14598 to 15164 567 to 1       567/567
(100 %)
5 diff
(99.2 %id)
DB365942   .b 14613 to 15155 558 to 17   AAA Possibly primed on the genome, locally A rich (24/26 A in genome downstream of last aligned base) 542/549
(98 %)
30 diff
(94.6 %id)
BU739241 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 14661 to 15182 522 to 1   fully sequenced,   522/522
(100 %)
2 diff
(99.7 %id)
AW300929 colon, moderately differentiated adenocarcinoma .b 14666 to 15166 501 to 1       501/501
(100 %)
0 diff
(100 %id)
BF448401 fibrotheoma, ovary .b 14669 to 15171 503 to 1       503/503
(100 %)
0 diff
(100 %id)
BF196952 pooled .b 14673 to 15205 533 to 1       533/533
(100 %)
0 diff
(100 %id)
DB381358 placenta .b 14686 to 15155 472 to 1       472/553
(85 %)
15 diff
(97.3 %id)
AA922844 adenocarcinoma, colon .b 14707 to 15173 467 to 1       467/467
(100 %)
0 diff
(100 %id)
BC039603 Skin, melanotic melanoma. .b 14748 to 16139 1 to 1391   available from MGC, AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 1391/1391
(100 %)
1 diff
(100.0 %id)
BP388634 pancreatic islet .b 14750 to 15159 1 to 410     Submitted on the opposite strand 410/410
(100 %)
0 diff
(100 %id)
BQ225792 melanotic melanoma, skin .b 14750 to 15625 1 to 881   available from MGC,   881/883
(99 %)
12 diff
(98.7 %id)
AA838287 colon, colon tumor .b 14754 to 15155 399 to 1       399/399
(100 %)
3 diff
(99.3 %id)
AI417753 Prostate .b 14755 to 15206 452 to 1       452/452
(100 %)
0 diff
(100 %id)
AA419406 germinal center B cell .b 14760 to 15171 413 to 1       413/413
(100 %)
1 diff
(99.8 %id)
AW751195 colon .b 14763 to 14922 161 to 1       161/161
(100 %)
9 diff
(94.5 %id)
AI431669 adenocarcinoma, Pancreas .b 14767 to 15165 399 to 1       399/399
(100 %)
0 diff
(100 %id)
AI198998 anaplastic oligodendroglioma, brain .b 14770 to 15206 437 to 1       437/437
(100 %)
0 diff
(100 %id)
AI028783   .b 14771 to 15175 405 to 1       405/405
(100 %)
0 diff
(100 %id)
DA362873 subthalamic nucleus .b 14777 to 15343 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
AA278386 germinal center B cell .b 14782 to 15155 387 to 14   AAA Possibly primed on the genome, locally A rich (24/26 A in genome downstream of last aligned base) 374/374
(100 %)
0 diff
(100 %id)
AI263984 adenocarcinoma, colon .b 14783 to 15173 391 to 1       391/391
(100 %)
0 diff
(100 %id)
BE222755 brain, oligodendroglioma .b 14822 to 15173 352 to 1       352/352
(100 %)
0 diff
(100 %id)
CX872294 embryonic stem .b 14836 to 15646 1 to 811       811/811
(100 %)
0 diff
(100 %id)
AW973036   .b 14871 to 15205 335 to 1     Submitted on the opposite strand 335/465
(72 %)
3 diff
(99.4 %id)
C75097   .b 14891 to 15155 291 to 26   AAA Possibly primed on the genome, locally A rich (24/26 A in genome downstream of last aligned base) 266/266
(100 %)
5 diff
(98.2 %id)
AA280014 germinal center B cell .b 14895 to 15206 315 to 1   fully sequenced,   315/315
(100 %)
4 diff
(98.8 %id)
AI362343 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 14913 to 15260 22 to 369     Submitted on the opposite strand 348/369
(94 %)
6 diff
(98.4 %id)
AI393365 pooled .b 14915 to 15174 260 to 1       260/260
(100 %)
0 diff
(100 %id)
AA879406 pooled .b 14976 to 15209 234 to 1       234/234
(100 %)
0 diff
(100 %id)
AA129068   .b 15002 to 15205 204 to 1       204/204
(100 %)
0 diff
(100 %id)
AA148759   .b 15006 to 15169 166 to 1     Submitted on the opposite strand 166/166
(100 %)
5 diff
(97.0 %id)
BU603024 mixed (pool of 40 RNAs) .b 15049 to 15887 1 to 837       837/838
(99 %)
15 diff
(98.3 %id)
BM023447 Islets of Langerhans, Pancreas .b 15093 to 15167 1 to 75       75/75
(100 %)
0 diff
(100 %id)
F07073 brain, total brain .b 15097 to 15365 1 to 269       269/269
(100 %)
0 diff
(100 %id)
N80435 multiple sclerosis lesions .b 15193 to 15515 1 to 325       325/325
(100 %)
7 diff
(97.9 %id)
CR745419 multiple sclerosis lesions .b 15196 to 15900 1 to 706       706/709
(99 %)
3 diff
(99.6 %id)
BG696668 skin .b 15219 to 15959 1 to 736       736/736
(100 %)
6 diff
(99.2 %id)
BE889851 leiomyosarcoma, uterus .b 15290 to 16004 1 to 722       722/971
(74 %)
23 diff
(97.7 %id)
CF887077 lung .b 15326 to 15792 1 to 466   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 466/466
(100 %)
1 diff
(99.8 %id)
CA396444 eye, RPE/choroid .b 15378 to 15910 1 to 533       533/533
(100 %)
0 diff
(100 %id)
TI_149291844   .b 15464 to 16147 768 to 85   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 684/686
(99 %)
0 diff
(100 %id)
BM142183 Islets of Langerhans, Pancreas .b 15481 to 16022 1 to 542   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 542/542
(100 %)
1 diff
(99.9 %id)
BU682234 lung .b 15526 to 16147 638 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 622/622
(100 %)
0 diff
(100 %id)
BQ775744 Bone, Human Chondrosarcoma Cell Line .b 15526 to 16139 630 to 17   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 614/614
(100 %)
0 diff
(100 %id)
AA743839 germinal center B cell .b 15529 to 15844 1 to 316       316/316
(100 %)
0 diff
(100 %id)
TI_149287708   .b 15551 to 16392 919 to 85   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 835/1000
(83 %)
24 diff
(97.6 %id)
TI_149310308   .b 15557 to 16392 912 to 84   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 829/902
(91 %)
30 diff
(96.7 %id)
AA393411   .b 15561 to 16015 1 to 455   fully sequenced,   455/455
(100 %)
1 diff
(99.8 %id)
TI_149287709   .b 15635 to 16392 837 to 84   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 802/1005
(79 %)
21 diff
(98.0 %id)
BM126891 Islets of Langerhans, Pancreas .b 15665 to 16212 1 to 548       548/548
(100 %)
0 diff
(100 %id)
BU681108 lung .b 15702 to 16392 708 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 690/700
(98 %)
3 diff
(99.6 %id)
BU681107 lung .b 15718 to 16392 693 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 675/675
(100 %)
4 diff
(99.5 %id)
AI333806 lung .b 15758 to 16142 385 to 1       385/385
(100 %)
0 diff
(100 %id)
CF890791 lung .b 15762 to 16392 649 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 631/631
(100 %)
0 diff
(100 %id)
AW969546   .b 15764 to 16384 1 to 621   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 621/621
(100 %)
1 diff
(99.9 %id)
BU688624 lung, Primary Lung Epithelial Cells .b 15782 to 16392 629 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 611/611
(100 %)
1 diff
(99.9 %id)
AW769746 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .b 15865 to 16139 285 to 11   AAA Possibly primed on the genome, locally A rich (18/20 A in genome downstream of last aligned base) 275/275
(100 %)
0 diff
(100 %id)
BM023166 Islets of Langerhans, Pancreas .b 15867 to 16393 531 to 5       527/531
(99 %)
0 diff
(100 %id)
DB573448 hypothalamus .b 15914 to 16384 1 to 471     Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
DB572585 hypothalamus .b 15915 to 16384 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
AW002079 anaplastic oligodendroglioma, brain .b 15918 to 16392 475 to 1       475/475
(100 %)
0 diff
(100 %id)
AI143227 heart .b 15947 to 16393 451 to 5   tiling clone,   447/451
(99 %)
0 diff
(100 %id)
DB561243 hypothalamus .b 15965 to 16384 1 to 421     Submitted on the opposite strand 421/421
(100 %)
3 diff
(99.3 %id)
DB561695 hypothalamus .b 15969 to 16384 1 to 417     Submitted on the opposite strand 417/417
(100 %)
1 diff
(99.8 %id)
Z40164 brain, total brain .b 15976 to 16147 172 to 1       172/172
(100 %)
1 diff
(99.5 %id)
N68008 multiple sclerosis lesions .b 15976 to 16392 417 to 1       417/417
(100 %)
0 diff
(100 %id)
AA400896   .b 15985 to 16395 411 to 1   fully sequenced,   411/411
(100 %)
1 diff
(99.8 %id)
BM141878 Islets of Langerhans, Pancreas .b 15992 to 16392 413 to 13   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 401/401
(100 %)
0 diff
(100 %id)
BM128729 Islets of Langerhans, Pancreas .b 16083 to 16150 1 to 68       68/68
(100 %)
0 diff
(100 %id)
BM128560 Islets of Langerhans, Pancreas .b 16083 to 16133 1 to 51       51/51
(100 %)
0 diff
(100 %id)
AA767258 germinal center B cell .b 16193 to 16384 202 to 11   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 192/192
(100 %)
0 diff
(100 %id)
AI500057 lymph node, lymphoma, follicular mixed small and largecell .b 16201 to 16392 205 to 14   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 192/192
(100 %)
0 diff
(100 %id)
AI864711 lymph node, lymphoma, follicular mixed small and largecell .b 16209 to 16384 191 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 176/176
(100 %)
0 diff
(100 %id)
L22179   .c 1 to 4321 1 to 4345   tiling clone,   4345/6940
(62 %)
14 diff
(99.8 %id)
AI523536 B-cell, chronic lymphotic leukemia .c 236 to 970 1 to 727     Submitted on the opposite strand 727/744
(97 %)
19 diff
(97.5 %id)
AI762165 B-cell, chronic lymphotic leukemia .c 236 to 1089 1 to 854     Submitted on the opposite strand 854/854
(100 %)
25 diff
(97.1 %id)
AW205345   .c 237 to 771 1 to 533     Submitted on the opposite strand 533/533
(100 %)
5 diff
(99.1 %id)
AI699292 pooled .c 254 to 678 1 to 422     Submitted on the opposite strand 422/422
(100 %)
9 diff
(97.9 %id)
AA296420 umbilical vein .c 375 to 648 1 to 275       275/275
(100 %)
8 diff
(97.1 %id)
AW954249   .c 376 to 936 1 to 566       566/587
(96 %)
20 diff
(96.6 %id)
AW960268   .c 376 to 943 1 to 566       566/577
(98 %)
20 diff
(96.6 %id)
AI674629 pooled .c 437 to 533 97 to 1       97/97
(100 %)
1 diff
(99.0 %id)
S78570   .c 3854 to 4951 1 to 1098   tiling clone,   1098/1098
(100 %)
1 diff
(100.0 %id)
AF272371   .c 4010 to 4411 1 to 403       403/456
(88 %)
8 diff
(98.3 %id)
AF272380   .c 4010 to 4395 1 to 386       386/453
(85 %)
3 diff
(99.4 %id)
AF272381   .c 4010 to 4564 1 to 555       555/611
(90 %)
7 diff
(98.9 %id)
CT003229 T-Lymphocytes .d 1 to 713 1 to 713   tiling clone,   713/713
(100 %)
0 diff
(100 %id)
DA339969 hippocampus .d 673 to 1252 2 to 581   tiling clone, capped   580/580
(100 %)
1 diff
(99.9 %id)
AI221104 pooled .e 1 to 559 1 to 552     Submitted on the opposite strand 552/555
(99 %)
11 diff
(98.1 %id)
AI202117 anaplastic oligodendroglioma, brain .e 1 to 653 1 to 644     Submitted on the opposite strand 644/647
(99 %)
15 diff
(97.7 %id)
AI377819 pooled .e 1 to 534 1 to 534   tiling clone, Submitted on the opposite strand 534/534
(100 %)
0 diff
(100 %id)
AA953832 carcinoid, lung .e 2 to 539 1 to 532     Submitted on the opposite strand 532/532
(100 %)
12 diff
(97.8 %id)
AA988109 carcinoid, lung .e 11 to 524 1 to 512     Submitted on the opposite strand 512/512
(100 %)
4 diff
(99.3 %id)
AI360239 anaplastic oligodendroglioma, brain .e 19 to 851 1 to 834   tiling clone, Submitted on the opposite strand 769/834
(92 %)
11 diff
(98.7 %id)
AI492655 B-cell, chronic lymphotic leukemia .e 19 to 885 1 to 864   tiling clone, Submitted on the opposite strand 864/884
(97 %)
32 diff
(96.4 %id)
AW027041 thymus, pooled .e 19 to 837 1 to 818   tiling clone, Submitted on the opposite strand 818/818
(100 %)
11 diff
(98.7 %id)
AW269296 Kidney .e 49 to 691 1 to 641     Submitted on the opposite strand 641/641
(100 %)
18 diff
(97.2 %id)
H95685 pineal gland .e 55 to 409 1 to 356     Submitted on the opposite strand 354/435
(81 %)
7 diff
(98.4 %id)
AA827690 germinal center B cell .e 60 to 519 1 to 458     Submitted on the opposite strand 458/458
(100 %)
2 diff
(99.6 %id)
AA830862 germinal center B cell .e 79 to 516 1 to 434     Submitted on the opposite strand 434/434
(100 %)
15 diff
(96.6 %id)
AY187943   .e 200 to 524 110 to 434       325/434
(74 %)
6 diff
(98.7 %id)
CR746941 embryonal carcinoma, cell line, testis .f 1 to 466 12 to 477   tiling clone,   466/477
(97 %)
6 diff
(98.8 %id)
BQ212604 embryonal carcinoma, cell line, testis .f 3 to 855 1 to 854   tiling clone,   854/856
(99 %)
2 diff
(99.8 %id)
AI475830 B-cell, chronic lymphotic leukemia .g 1 to 481 1 to 481 P160X tiling clone, Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
AF272379   .h 1 to 867 1 to 867 S86I tiling clone,   867/935
(92 %)
4 diff
(99.6 %id)
AV757412 bone marrow .i-u 1 to 455 69 to 523 exact tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 455/523
(86 %)
6 diff
(98.9 %id)
DW425619 Liver .i-u 78 to 347 16 to 285       270/285
(94 %)
6 diff
(97.9 %id)
CA336927 posterior rhombomeres 5-8 (4 pooled) .i-u 204 to 442 1 to 239   tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 239/239
(100 %)
0 diff
(100 %id)
AW102990 ovary, tumor, 5 pooled (see description) .j-u 1 to 618 618 to -1 Q5K C8G E9S H12T K13S ... tiling clone,   618/618
(100 %)
18 diff
(97.1 %id)
BE171478 head_neck .k 1 to 448 8 to 455 I42V tiling clone,   455/461
(98 %)
11 diff
(97.7 %id)
AI673035 thymus, pooled .k 1 to 603 620 to 8 K2I V4Q E6K E7K S9K ... tiling clone,   608/622
(97 %)
38 diff
(93.9 %id)
DW414944 Liver .l 1 to 298 17 to 314 K10E tiling clone,   298/314
(94 %)
6 diff
(98.1 %id)
DW438762 Liver .l 1 to 228 17 to 244   tiling clone,   228/244
(93 %)
7 diff
(97.2 %id)
AW976690   .m 1 to 586 1 to 586 G2L A9V S13C tiling clone,   586/586
(100 %)
7 diff
(98.9 %id)
AA745862 germinal center B cell .m 90 to 508 1 to 418     Submitted on the opposite strand 418/418
(100 %)
5 diff
(98.9 %id)
AA745855 germinal center B cell .m 91 to 481 1 to 390     Submitted on the opposite strand 390/390
(100 %)
9 diff
(97.7 %id)
AF487906   .n 1 to 233 203 to 435 exact tiling clone,   233/435
(53 %)
7 diff
(98.4 %id)
BQ898208 dorsal root ganglia .o 1 to 554 1 to 573 R67A G68R T69E R71P S72G ... tiling clone,   573/1031
(55 %)
30 diff
(97.1 %id)
CF551801 Pooled muscle (cardiac and skeletal) .o 431 to 1290 21 to 881   tiling clone,   861/881
(97 %)
8 diff
(99.1 %id)
BC090876 Muscle pool- 2 tissues- cardiac and skeletalmuscle. .o 439 to 2405 1 to 1967   tiling clone, AAA   1967/1967
(100 %)
0 diff
(100 %id)
BX282289 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .o 1669 to 2125 1 to 457       457/457
(100 %)
0 diff
(100 %id)
CB049325 Prostate .o 2286 to 2800 1 to 514   tiling clone, fully sequenced,   514/514
(100 %)
3 diff
(99.5 %id)
CB049324 Prostate .o 2339 to 2800 494 to 33   fully sequenced, AAA   462/462
(100 %)
6 diff
(98.8 %id)
DA125717 cerebellum .o 2435 to 3003 2 to 570   tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
BP431782   .o 2951 to 3387 1 to 437   tiling clone,   437/437
(100 %)
3 diff
(99.4 %id)
BQ228012 melanotic melanoma, skin .o 3148 to 3726 12 to 594   tiling clone,   583/1033
(56 %)
25 diff
(97.6 %id)
EL950851 eyeball .o 3406 to 3966 1 to 561   tiling clone,   561/561
(100 %)
0 diff
(100 %id)
AW949174 prostate_tumor .o 3569 to 3896 337 to 10     Submitted on the opposite strand 328/337
(97 %)
0 diff
(100 %id)
BX112101 pooled .o 3585 to 4016 1 to 436       436/441
(98 %)
5 diff
(98.9 %id)
FN050974 breast carcinoma .o 3592 to 3648 57 to 1     Submitted on the opposite strand 57/58
(98 %)
0 diff
(100 %id)
AI247352 pooled .o 3687 to 4160 470 to 1       470/470
(100 %)
4 diff
(99.2 %id)
BF886740 testis_normal .o 3697 to 4185 489 to 1     Submitted on the opposite strand 489/489
(100 %)
3 diff
(99.4 %id)
DB361922 mammary gland .o 3782 to 4330 553 to 1   tiling clone,   553/554
(99 %)
10 diff
(98.2 %id)
DB343150 thymus .o 3806 to 4330 526 to 1       526/526
(100 %)
1 diff
(99.9 %id)
BX094735 carcinoid, lung .o 4139 to 4616 1 to 478       478/478
(100 %)
0 diff
(100 %id)
BE669782 carcinoid, lung .o 4264 to 4740 479 to 3   tiling clone,   477/479
(99 %)
0 diff
(100 %id)
BE669762 carcinoid, lung .o 4305 to 4740 438 to 3       436/438
(99 %)
0 diff
(100 %id)
AI216174 carcinoid, lung .o 4375 to 4738 364 to 1       364/364
(100 %)
1 diff
(99.8 %id)
GD154334   .o 4651 to 4740 1 to 90       90/92
(97 %)
3 diff
(96.8 %id)
AA620498 lung, lung carcinoma .p-u 1 to 393 396 to 1   tiling clone,   396/396
(100 %)
3 diff
(99.3 %id)
CV345909 stomach_normal .p-u 318 to 755 438 to 1   tiling clone, Submitted on the opposite strand 438/439
(99 %)
0 diff
(100 %id)
AW811761 stomach .p-u 419 to 808 1 to 390       390/401
(97 %)
8 diff
(98.1 %id)
AW811785 stomach .p-u 431 to 802 1 to 372       372/372
(100 %)
2 diff
(99.5 %id)
DA647099 mammary gland .p-u 655 to 1193 2 to 540   tiling clone, capped   539/549
(98 %)
1 diff
(99.9 %id)
BF878980 lung_tumor .p-u 920 to 1428 531 to 21 exact   Submitted on the opposite strand 511/531
(96 %)
0 diff
(100 %id)
CD250832 Blood vessels - aorta, basilar and artery .p-u 1148 to 1751 1 to 615   tiling clone,   615/811
(75 %)
39 diff
(95.2 %id)
DB108649 thymus .p-u 1197 to 1766 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB262481 uterus .p-u 1227 to 1814 2 to 589   tiling clone, capped   588/588
(100 %)
2 diff
(99.7 %id)
CB958192 Pooled-Glandular .q-u 1 to 678 1 to 687   tiling clone,   687/877
(78 %)
18 diff
(98.0 %id)
BQ777823 Pancreas, Purified pancreatic islet .q-u 640 to 1244 11 to 615 exact tiling clone, fully sequenced,   605/615
(98 %)
6 diff
(99.1 %id)
BP384708 pancreatic islet .q-u 762 to 1259 1 to 498   tiling clone, Submitted on the opposite strand 498/498
(100 %)
0 diff
(100 %id)
BQ777530 Pancreas, Purified pancreatic islet .q-u 1147 to 1254 108 to 1   fully sequenced,   108/108
(100 %)
0 diff
(100 %id)
BF111204 carcinoid, lung .r 1 to 491 1 to 491 exact tiling clone, Submitted on the opposite strand 491/491
(100 %)
1 diff
(99.8 %id)
TI_153989608   .r 2 to 507 59 to 565 exact   Submitted on the opposite strand 507/754
(67 %)
9 diff
(98.9 %id)
AW205581   .r 3 to 500 1 to 498     Submitted on the opposite strand 498/498
(100 %)
0 diff
(100 %id)
BF335559 colon .r 363 to 952 12 to 601   tiling clone,   590/601
(98 %)
6 diff
(99.1 %id)
AA748030 germinal center B cell .s-u 1 to 698 785 to 86 K3Q D6G P9S E10R T11D ... tiling clone,   698/785
(88 %)
0 diff
(100 %id)
AA252846 germinal center B cell .t-u 1 to 329 12 to 339   tiling clone,   329/339
(97 %)
6 diff
(98.3 %id)
AA744382 germinal center B cell .t-u 1 to 687 699 to 10 A16X G17R A18R L19C H20T ... tiling clone, AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 689/689
(100 %)
13 diff
(98.2 %id)
AA252814.
matches multiple genes
germinal center B cell .t-u 308 to 687 382 to 1     also hits gene zapor 382/382
(100 %)
4 diff
(99.0 %id)
CV570369 cornea, eye .u-u 1 to 569 1 to 569 exact tiling clone,   569/569
(100 %)
0 diff
(100 %id)
BF752531 breast_normal .u-u 274 to 526 265 to 7     Submitted on the opposite strand 259/268
(96 %)
0 diff
(100 %id)
BF328345 breast_normal .u-u 282 to 557 285 to 9       277/285
(97 %)
0 diff
(100 %id)
BF751401 breast_normal .u-u 282 to 543 261 to 1     Submitted on the opposite strand 261/261
(100 %)
2 diff
(99.3 %id)
BF752528 breast_normal .u-u 298 to 543 12 to 254       243/254
(95 %)
6 diff
(97.7 %id)
DB228028 trachea .va-u 1 to 565 2 to 566 exact tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
DB147747 thymus .vb-u 1 to 523 2 to 525 H44A T46N L48T A49C V52C ... tiling clone, capped   524/584
(89 %)
3 diff
(99.5 %id)
AW015413   .vc 1 to 470 15 to 485 exact tiling clone, Submitted on the opposite strand 471/471
(100 %)
4 diff
(99.2 %id)
BE244120 leukopheresis .vd-u 1 to 325 1 to 325 S28F tiling clone,   325/325
(100 %)
3 diff
(99.1 %id)
BE246209 leukopheresis .vd-u 1 to 462 1 to 463 S28M A29S G30C M31V W32C ... tiling clone,   463/463
(100 %)
8 diff
(98.3 %id)
AY187945   .ve 1 to 329 235 to 563 exact tiling clone,   329/563
(58 %)
6 diff
(99.0 %id)
CD621396   .ve 1 to 67 9 to 75       67/76
(88 %)
4 diff
(94.8 %id)
T28440 brain .vf 1 to 323 1 to 323 exact tiling clone,   323/323
(100 %)
1 diff
(99.7 %id)
AK021845 whole embryo, mainly head Gene MLL, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
BG183439   Gene MLL, variant not shown              
BG208737   Gene MLL, variant not shown              
AV648051 corresponding non cancerous liver tissue Gene MLL, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV648115 corresponding non cancerous liver tissue Gene MLL, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV648449 corresponding non cancerous liver tissue Gene MLL, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
T95037 liver and spleen Gene MLL, variant not shown              
T95133 liver and spleen Gene MLL, variant not shown              
W16724 lung Gene MLL, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
324 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j-u, .k, .l, .m, .n, .o, .p-u, .q-u, .r, .s-u, .t-u, .u-u, .va-u, .vb-u, .vc, .vd-u, .ve, .vf Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI