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Gene TMEM198TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
108 supporting clones for gene TMEM198 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AI888691 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 1 to 474 474 to 2   tiling clone,   473/474
(99 %)
0 diff
(100 %id)
BF515430   .a 344 to 473 130 to 1       130/130
(100 %)
0 diff
(100 %id)
BG702699 brain, hippocampus .a 344 to 1079 1 to 735   tiling clone,   735/735
(100 %)
13 diff
(98.3 %id)
BI550629 brain, hippocampus .a 344 to 1101 1 to 766   available from MGC,   766/866
(88 %)
25 diff
(97.2 %id)
BC068567 Brain, hippocampus .a 349 to 2741 1 to 2393 H19Q V183G tiling clone, available from MGC, AAA   2393/2393
(100 %)
7 diff
(99.8 %id)
EL736440 mixed .a 934 to 1590 1 to 655       655/656
(99 %)
4 diff
(99.4 %id)
TI_1948234815   .a 934 to 1675 131 to 872       742/1268
(58 %)
10 diff
(99.3 %id)
TI_1948234979   .a 934 to 1357 128 to 551   fully sequenced,   424/551
(76 %)
7 diff
(98.8 %id)
TI_1948235148   .a 934 to 1675 137 to 879       743/1291
(57 %)
8 diff
(99.4 %id)
TI_1948235320   .a 934 to 1435 130 to 634   fully sequenced,   505/634
(79 %)
7 diff
(98.9 %id)
BM793372 Ascites, stomach .a 991 to 1570 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
AK302369 testis .a 994 to 2453 1 to 1460   tiling clone,   1460/1460
(100 %)
3 diff
(99.8 %id)
DC399821 testis .a 994 to 1541 1 to 548       548/548
(100 %)
1 diff
(99.9 %id)
BM083423 lung, small cell carcinoma .a 995 to 1631 1 to 644       644/644
(100 %)
11 diff
(98.3 %id)
BE263998 lung, small cell carcinoma .a 1014 to 1673 1 to 658       658/693
(94 %)
7 diff
(99.0 %id)
AW749988 breast .a 1015 to 1401 1 to 390       390/390
(100 %)
17 diff
(95.7 %id)
BF307733 muscle, rhabdomyosarcoma .a 1188 to 1878 1 to 684       684/938
(72 %)
12 diff
(98.8 %id)
BF306289 muscle, rhabdomyosarcoma .a 1188 to 1865 1 to 667       667/923
(72 %)
21 diff
(97.8 %id)
BE297512 muscle, rhabdomyosarcoma .a 1208 to 1878 1 to 669       669/769
(86 %)
11 diff
(98.6 %id)
BG715955 brain, hypothalamus .a 1241 to 1967 1 to 722       722/722
(100 %)
11 diff
(98.5 %id)
DB504090 hypothalamus .a 1249 to 1718 1 to 470       470/470
(100 %)
0 diff
(100 %id)
CB130374 Liver .a 1265 to 1725 1 to 461       461/461
(100 %)
0 diff
(100 %id)
TI_1948234980   .a 1327 to 2019 819 to 124   fully sequenced,   696/819
(84 %)
3 diff
(99.7 %id)
TI_1948235321   .a 1405 to 2019 740 to 126   fully sequenced,   615/740
(83 %)
3 diff
(99.6 %id)
TI_1948235149   .a 1668 to 2019 476 to 125       352/1368
(25 %)
4 diff
(99.8 %id)
AL529574 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1676 to 2712 1037 to 1       1037/1037
(100 %)
20 diff
(98.1 %id)
TI_1948234816   .a 1682 to 2019 464 to 127       338/1332
(25 %)
1 diff
(100.0 %id)
BG110062 Bone, osteosarcoma, cell line .a 1908 to 2676 1 to 770       770/869
(88 %)
27 diff
(96.9 %id)
CD244531 testis .a 1998 to 2772 811 to 27   tiling clone, Submitted on the opposite strand 785/872
(90 %)
0 diff
(100 %id)
DR004956 placenta .b 1 to 570 3 to 572   tiling clone,   570/572
(99 %)
6 diff
(99.0 %id)
BM805302 brain, hippocampus .b 109 to 837 11 to 738       728/1085
(67 %)
22 diff
(98.0 %id)
BC080573 Breast, adenocarcinoma .b 136 to 2351 1 to 2216 exact available from MGC, AAA   2216/2216
(100 %)
2 diff
(100.0 %id)
NM_001005209.1   .b 136 to 2351 1 to 2216 exact RefSeq, AAA   2216/2216
(100 %)
2 diff
(100.0 %id)
BU538963 adenocarcinoma, cell line, breast .b 137 to 744 1 to 611       611/1193
(51 %)
15 diff
(98.8 %id)
TI_57221599   .b 145 to 964 34 to 852       819/854
(95 %)
11 diff
(98.8 %id)
BM806020 brain, hippocampus .b 148 to 781 9 to 642       634/1108
(57 %)
19 diff
(98.3 %id)
BI757051 brain .b 149 to 964 1 to 815       815/817
(99 %)
6 diff
(99.3 %id)
CR597020 Neuroblastoma Cot 50-normalized .b 157 to 2308 1 to 2152 exact tiling clone,   2152/2152
(100 %)
0 diff
(100 %id)
AL529575 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 157 to 1244 1 to 1079       1079/1079
(100 %)
24 diff
(97.8 %id)
BI917699 brain .b 175 to 781 1 to 604       604/604
(100 %)
6 diff
(99.1 %id)
TI_57243736   .b 175 to 781 30 to 633       604/633
(95 %)
8 diff
(98.8 %id)
CN289793 embryonic stem cells, DMSO-treated H9 cellline .b 185 to 334 1 to 150       150/150
(100 %)
0 diff
(100 %id)
TI_44166216   .b 189 to 895 90 to 796       707/796
(88 %)
9 diff
(98.9 %id)
BM805491 brain, hippocampus .b 229 to 1066 34 to 872       839/1099
(76 %)
35 diff
(96.9 %id)
BI913178 brain .b 386 to 813 259 to 698       583/899
(64 %)
58 diff
(93.6 %id)
BG761166 melanotic melanoma, high MDR (cell line), skin .b 461 to 1271 1 to 812       812/942
(86 %)
13 diff
(98.7 %id)
BG767789 melanotic melanoma, high MDR (cell line), skin .b 461 to 1163 1 to 701       701/701
(100 %)
8 diff
(98.9 %id)
AK123175 cerebellum .b 705 to 2347 1 to 1643   available from FLJ,   1643/1643
(100 %)
3 diff
(99.9 %id)
DA088046 cerebellum .b 706 to 1265 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
BG706627 brain, hypothalamus .b 837 to 1708 1 to 864       864/867
(99 %)
33 diff
(96.2 %id)
BX327720 Neuroblastoma Cot 50-normalized .b 903 to 1831 1 to 927       927/927
(100 %)
14 diff
(98.5 %id)
CR592699 Neuroblastoma Cot 25-normalized .b 1571 to 2066 1 to 496       496/496
(100 %)
0 diff
(100 %id)
BX353651 Neuroblastoma Cot 25-normalized .b 1572 to 1973 1 to 403   fully sequenced,   403/403
(100 %)
1 diff
(99.8 %id)
AL524643 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 1572 to 2353 1 to 783   tiling clone,   783/783
(100 %)
1 diff
(99.9 %id)
DB506480 hypothalamus .b 1671 to 2139 1 to 469       469/469
(100 %)
2 diff
(99.6 %id)
BM703284 eye, human retina .b 1712 to 2093 1 to 382   fully sequenced,   382/382
(100 %)
0 diff
(100 %id)
BQ448246 Knee, Osteoarthritic Cartilage .b 1770 to 2346 594 to 19   AAA   576/588
(97 %)
1 diff
(99.9 %id)
TI_153960032   .b 1806 to 2332 79 to 606       528/540
(97 %)
35 diff
(93.6 %id)
DB298190 cerebellum .b 1808 to 2347 540 to 1       540/540
(100 %)
0 diff
(100 %id)
BF115238 fibrotheoma, ovary .b 1814 to 2337 524 to 1       524/524
(100 %)
0 diff
(100 %id)
AW118141 pooled .b 1848 to 2349 505 to 4       502/505
(99 %)
0 diff
(100 %id)
AI498947 anaplastic oligodendroglioma, brain .b 1854 to 2335 482 to 1       482/482
(100 %)
2 diff
(99.6 %id)
DB546819 hippocampus .b 1878 to 2335 1 to 458     Submitted on the opposite strand 458/460
(99 %)
1 diff
(99.8 %id)
DB548519 hippocampus .b 1878 to 2335 1 to 458     Submitted on the opposite strand 458/460
(99 %)
1 diff
(99.8 %id)
DB575339 hypothalamus .b 1883 to 2337 1 to 454     Submitted on the opposite strand 454/454
(100 %)
2 diff
(99.6 %id)
BM672313 eye, human retina .b 1893 to 2306 414 to 1       414/422
(98 %)
0 diff
(100 %id)
BF527745 anaplastic oligodendroglioma with 1p/19qloss, brain .b 1902 to 2337 1 to 435   AAA   435/435
(100 %)
3 diff
(99.4 %id)
BG222426 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .b 1925 to 2353 433 to 5       429/433
(99 %)
0 diff
(100 %id)
AW663502 pooled .b 1934 to 2349 418 to 3       416/418
(99 %)
0 diff
(100 %id)
BX329546 Neuroblastoma Cot 25-normalized .b 1944 to 2339 410 to 8   fully sequenced,   403/410
(98 %)
7 diff
(98.3 %id)
AW139465   .b 1955 to 2337 400 to 18   AAA   383/383
(100 %)
0 diff
(100 %id)
AA293069 ovarian tumor, ovary .b 1963 to 2335 391 to 19   AAA Submitted on the opposite strand 373/373
(100 %)
2 diff
(99.5 %id)
DB509789 testis .b 1971 to 2350 1 to 380     Submitted on the opposite strand 380/380
(100 %)
0 diff
(100 %id)
AI553789 anaplastic oligodendroglioma, brain .b 1978 to 2342 369 to 5       365/369
(98 %)
0 diff
(100 %id)
AI376907   .b 1985 to 2351 384 to 18   AAA   367/367
(100 %)
0 diff
(100 %id)
BI913624 brain .b 1989 to 2336 1 to 348   AAA   348/348
(100 %)
0 diff
(100 %id)
TI_57241382   .b 1989 to 2336 34 to 381   AAA   348/381
(91 %)
6 diff
(98.5 %id)
BG056047 anaplastic oligodendroglioma, brain .b 2013 to 2351 339 to 1       339/339
(100 %)
0 diff
(100 %id)
BM142150 Islets of Langerhans, Pancreas .b 2018 to 2337 1 to 320       320/328
(97 %)
1 diff
(99.7 %id)
DB533278 hippocampus .b 2021 to 2335 1 to 315     Submitted on the opposite strand 315/317
(99 %)
19 diff
(94.1 %id)
AA531607 invasive prostate tumor, Prostate .b 2029 to 2350 1 to 321   AAA   321/321
(100 %)
4 diff
(98.8 %id)
AI811618 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2037 to 2347 327 to 17   AAA   311/311
(100 %)
1 diff
(99.7 %id)
BM141757 Islets of Langerhans, Pancreas .b 2048 to 2337 295 to 5       291/295
(98 %)
0 diff
(100 %id)
AI214980   .b 2061 to 2349 292 to 4       289/292
(98 %)
0 diff
(100 %id)
BM664765 eye, human retina .b 2063 to 2351 307 to 19   fully sequenced, AAA   289/289
(100 %)
0 diff
(100 %id)
AW138145   .b 2083 to 2337 272 to 18   AAA   255/255
(100 %)
1 diff
(99.7 %id)
AI343486 colon, colon tumor, RER+ .b 2092 to 2349 258 to 1       258/258
(100 %)
0 diff
(100 %id)
AA650416   .b 2094 to 2336 249 to 7       243/249
(97 %)
0 diff
(100 %id)
AI565370 Kidney .b 2126 to 2351 243 to 17   AAA   227/227
(100 %)
3 diff
(98.7 %id)
DB532588 hippocampus .b 2173 to 2335 1 to 162     Submitted on the opposite strand 162/164
(98 %)
3 diff
(98.2 %id)
BI753377 brain .c 1 to 818 7 to 832   tiling clone,   832/832
(100 %)
24 diff
(97.2 %id)
TI_57239209   .c 27 to 873 35 to 876       842/877
(96 %)
18 diff
(98.0 %id)
BI915482 brain .c 30 to 873 1 to 839   tiling clone,   839/840
(99 %)
14 diff
(98.4 %id)
TI_57239166   .c 31 to 874 23 to 865       843/865
(97 %)
19 diff
(97.9 %id)
BM921606 pooled brain, lung, testis .c 37 to 964 1 to 934   tiling clone,   934/1050
(88 %)
18 diff
(98.3 %id)
BI915151 brain .c 38 to 874 1 to 836   tiling clone,   836/836
(100 %)
15 diff
(98.3 %id)
TI_57244143   .c 43 to 671 28 to 655       628/655
(95 %)
9 diff
(98.7 %id)
BM807497 brain, hippocampus .c 44 to 989 25 to 986   tiling clone,   962/1144
(84 %)
55 diff
(95.2 %id)
BI914802 brain .c 45 to 671 1 to 626       626/626
(100 %)
5 diff
(99.3 %id)
BE383272 brain, neuroblastoma .c 58 to 709 1 to 660       642/662
(96 %)
23 diff
(96.6 %id)
BG768831 melanotic melanoma, high MDR (cell line), skin .c 59 to 728 1 to 670       670/670
(100 %)
2 diff
(99.8 %id)
TI_57218218   .c 367 to 818 409 to 863       839/863
(97 %)
23 diff
(97.4 %id)
BX376117 Neuroblastoma Cot 25-normalized .d 1 to 890 1 to 882   tiling clone,   882/885
(99 %)
21 diff
(97.7 %id)
AL522275 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .d 27 to 919 1 to 892   tiling clone,   892/892
(100 %)
7 diff
(99.3 %id)
AL522274 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .d 993 to 1907 943 to 31   tiling clone,   913/943
(96 %)
10 diff
(99.0 %id)
BX376116 Neuroblastoma Cot 25-normalized .d 1381 to 1911 554 to 21   tiling clone,   534/712
(75 %)
3 diff
(99.6 %id)
TI_57200602   .e 1 to 786 32 to 818 L9A R10Q A11V W12M R14P ... tiling clone,   787/819
(96 %)
14 diff
(98.3 %id)
BI821451 pooled brain, lung, testis .e 3 to 786 1 to 785   tiling clone,   785/786
(99 %)
10 diff
(98.8 %id)
DB478170 hippocampus .f-u 1 to 497 1 to 497   tiling clone,   497/497
(100 %)
0 diff
(100 %id)
BM794936 Ascites, stomach .g-u 1 to 422 1 to 422 E81Q tiling clone,   422/422
(100 %)
4 diff
(99.1 %id)
DB299963 cerebellum Gene TMEM198, variant not shown         This clone was ignored    
DA112253 cerebellum Gene TMEM198, variant not shown       capped This clone was ignored    
DA292879 hippocampus Gene TMEM198, variant not shown       capped      
CR596918 Neuroblastoma Cot 25-normalized Gene TMEM198, variant not shown         Suspected internal deletion, this clone was ignored    
BX353843 Neuroblastoma Cot 25-normalized Gene TMEM198, variant not shown         Suspected internal deletion, this clone was ignored    
BX375363 Neuroblastoma Cot 25-normalized Gene TMEM198, variant not shown         Suspected internal deletion, this clone was ignored    
DB479789 hippocampus Gene TMEM198, variant not shown         Suspected internal deletion, this clone was ignored    
AA188638   Gene TMEM198, variant not shown              
AA190611   Gene TMEM198, variant not shown              
BQ070204 brain, neuroblastoma, cell line Gene TMEM198, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C