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Gene HEATR4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
34 supporting clones for gene HEATR4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB081942 testis .a 1 to 459 9 to 467   tiling clone, capped   466/466
(100 %)
1 diff
(99.8 %id)
BC047590 testis .a 164 to 3434 198 to 3468 E38* tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 3468/3468
(100 %)
9 diff
(99.8 %id)
DB449399 testis .a 164 to 397 198 to 433       433/433
(100 %)
11 diff
(97.5 %id)
DB460195 testis .a 164 to 419 198 to 453       453/453
(100 %)
6 diff
(98.7 %id)
BG772808 testis .a 164 to 738 203 to 780       775/796
(97 %)
23 diff
(97.2 %id)
CD243990 testis .a 164 to 804 180 to 824       824/825
(99 %)
6 diff
(99.3 %id)
NM_203309.1   .a 164 to 3434 198 to 3468 E38* RefSeq, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 3468/3468
(100 %)
9 diff
(99.8 %id)
DB040830 testis .a 164 to 529 191 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DB092607 testis .a 164 to 459 188 to 483   capped   482/482
(100 %)
3 diff
(99.4 %id)
BQ375952 testis_normal .a 226 to 667 9 to 448       440/448
(98 %)
10 diff
(97.8 %id)
BQ376264 testis_normal .a 245 to 670 10 to 435       426/435
(97 %)
11 diff
(97.5 %id)
CD358661 testis .a 940 to 1791 1 to 857       857/873
(98 %)
13 diff
(98.6 %id)
DB337823 testis .a 2888 to 3431 544 to 1       544/544
(100 %)
0 diff
(100 %id)
DB514418 testis .a 3002 to 3434 1 to 435     Submitted on the opposite strand 435/435
(100 %)
9 diff
(98.0 %id)
AK302564 testis .b 1 to 3515 9 to 3523 exact tiling clone,   3523/3523
(100 %)
4 diff
(99.9 %id)
DB070699 testis .b 1 to 551 9 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DB099762 testis .b 1 to 559 9 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB576633 hypothalamus .c 1 to 485 1 to 485 exact tiling clone, Submitted on the opposite strand 485/485
(100 %)
3 diff
(99.4 %id)
DB559378 hypothalamus .c 60 to 485 1 to 426 E17*   Submitted on the opposite strand 426/426
(100 %)
2 diff
(99.6 %id)
DB525639 testis .d 1 to 406 1 to 406 L50X tiling clone, AAA Submitted on the opposite strand 406/406
(100 %)
1 diff
(99.8 %id)
AW291522   .e 1 to 383 400 to 18 S34* tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 383/383
(100 %)
1 diff
(99.8 %id)
AL704027 human skeletal muscle .f 164 to 591 196 to 623 R33Q tiling clone,   623/623
(100 %)
4 diff
(99.4 %id)
AW449497   .g-u 1 to 391 402 to 18 L18F E36V A37I V38K I39V ... AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 385/385
(100 %)
8 diff
(98.0 %id)
AA100496.
matches multiple genes
colon, tumor .g-u 5 to 396 1 to 393 E36X V51G R52K T53N tiling clone, also hits gene B4GALT5 393/393
(100 %)
2 diff
(99.5 %id)
G36889   .g-u 9 to 263 1 to 256       256/261
(98 %)
5 diff
(98.1 %id)
AW444473   .g-u 11 to 391 398 to 18 exact AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 381/387
(98 %)
5 diff
(98.8 %id)
BQ953182 epidermoid carcinoma, cell line, lung .g-u 14 to 578 14 to 581 R27K tiling clone,   568/945
(60 %)
6 diff
(99.4 %id)
BE843654 testis_normal .g-u 162 to 469 39 to 350 K50R tiling clone,   312/351
(88 %)
13 diff
(96.3 %id)
GD157862   .g-u 309 to 391 1 to 83   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 83/83
(100 %)
8 diff
(90.4 %id)
FN121203 breast carcinoma .g-u 450 to 544 1 to 89   tiling clone,   89/89
(100 %)
8 diff
(91.1 %id)
DB061946 testis .h 1 to 551 2 to 553 exact tiling clone, capped   552/552
(100 %)
1 diff
(99.9 %id)
DN991364 brain, whole brain .i 1 to 416 7 to 421 E3R tiling clone,   415/421
(98 %)
7 diff
(98.4 %id)
AK093515 testis Gene HEATR4, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AW877602 pnet Gene HEATR4, variant not shown         Suspected internal deletion, this clone was ignored    
AX748177   Gene HEATR4, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C