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Gene RNF183TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
45 supporting clones for gene RNF183 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BE796148 lung, small cell carcinoma .a 1 to 767 1 to 758 G16E S17A F18S C19A K20R ... tiling clone,   758/916
(82 %)
18 diff
(98.1 %id)
TI_1948083863   .a 101 to 514 122 to 538   fully sequenced,   417/538
(77 %)
9 diff
(98.4 %id)
TI_1948084131   .a 101 to 540 119 to 563   fully sequenced,   445/563
(79 %)
10 diff
(98.3 %id)
CV027777 mixed .a 108 to 685 1 to 578       578/594
(97 %)
8 diff
(98.7 %id)
TI_1948084679   .a 108 to 685 706 to 129       578/1081
(53 %)
0 diff
(100 %id)
TI_1948084400   .a 110 to 685 705 to 130       576/1122
(51 %)
0 diff
(100 %id)
AV749076 Pituitary .a 247 to 831 1 to 560       560/561
(99 %)
48 diff
(91.5 %id)
AW365066 denis_drash .a 295 to 539 245 to 1       245/245
(100 %)
9 diff
(96.4 %id)
BE326299 carcinoid, lung .a 318 to 838 521 to 1       521/521
(100 %)
3 diff
(99.5 %id)
BE463594 Kidney .a 318 to 839 522 to 1   tiling clone,   522/522
(100 %)
0 diff
(100 %id)
BE468156 carcinoid, lung .a 389 to 838 449 to 1       449/449
(100 %)
3 diff
(99.4 %id)
BX092754 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 447 to 849 407 to 6     Submitted on the opposite strand 402/407
(98 %)
0 diff
(100 %id)
AI889386 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 460 to 839 400 to 20   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 381/381
(100 %)
7 diff
(98.2 %id)
AI244282 Kidney .a 461 to 836 390 to 15       376/390
(96 %)
0 diff
(100 %id)
TI_1948083864   .a 484 to 690 338 to 132   fully sequenced,   207/230
(90 %)
5 diff
(97.9 %id)
TI_1948084132   .a 510 to 690 302 to 122   fully sequenced,   181/203
(89 %)
5 diff
(97.6 %id)
AA928883 carcinoid, lung .a 526 to 838 313 to 1       313/313
(100 %)
0 diff
(100 %id)
BM797555 Ascites, stomach .a 606 to 1087 1 to 483   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 483/483
(100 %)
5 diff
(99.0 %id)
AI923733 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 611 to 1092 482 to 1       482/482
(100 %)
2 diff
(99.6 %id)
AW139879   .a 621 to 839 236 to 18   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 219/219
(100 %)
0 diff
(100 %id)
BF511335   .a 651 to 1202 13 to 562   tiling clone, Submitted on the opposite strand 550/568
(96 %)
5 diff
(99.2 %id)
AI860474 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 761 to 1197 438 to 1       438/438
(100 %)
3 diff
(99.4 %id)
AA514593 colon .a 773 to 1162 1 to 389     Submitted on the opposite strand 389/389
(100 %)
2 diff
(99.5 %id)
AW972003   .a 775 to 1193 1 to 422       422/452
(93 %)
15 diff
(96.7 %id)
AI860400 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 776 to 1197 423 to 1       423/423
(100 %)
11 diff
(97.4 %id)
AW183348 pooled .a 814 to 1199 391 to 2   tiling clone,   390/391
(99 %)
0 diff
(100 %id)
BI494083 cochlea, ear .a 852 to 1197 1 to 346   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 346/346
(100 %)
5 diff
(98.6 %id)
BI494082 cochlea, ear .a 897 to 1205 310 to 2   fully sequenced, Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 309/310
(99 %)
8 diff
(97.5 %id)
AI872749 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 898 to 1199 309 to 1       309/309
(100 %)
12 diff
(96.2 %id)
DB454814 testis .b 1 to 469 1 to 469   tiling clone,   469/469
(100 %)
0 diff
(100 %id)
AW614405 Kidney .b 197 to 730 530 to 1       530/530
(100 %)
2 diff
(99.7 %id)
BE501488 Kidney .b 247 to 730 480 to 1       480/480
(100 %)
2 diff
(99.6 %id)
BF448088 Kidney .b 248 to 730 479 to 1       479/479
(100 %)
2 diff
(99.6 %id)
DB520222 testis .b 294 to 728 1 to 435   tiling clone, Submitted on the opposite strand 435/437
(99 %)
2 diff
(99.6 %id)
AK091940 Kidney .b 301 to 2131 1 to 1827 exact tiling clone, available from FLJ,   1827/1827
(100 %)
7 diff
(99.7 %id)
AX747267   .b 301 to 2131 1 to 1827 exact     1827/1827
(100 %)
7 diff
(99.7 %id)
DA633125 Kidney .b 302 to 900 2 to 597   capped   596/596
(100 %)
4 diff
(99.4 %id)
DB235497 trachea .b 458 to 956 2 to 494   tiling clone, capped   493/493
(100 %)
3 diff
(99.4 %id)
AA337967 endometrium .b 1067 to 1209 1 to 140       140/140
(100 %)
0 diff
(100 %id)
DB320922 Kidney .b 1558 to 2131 574 to 1       574/574
(100 %)
2 diff
(99.7 %id)
DB096915 testis .c 1 to 569 2 to 571   tiling clone, capped   570/571
(99 %)
3 diff
(99.5 %id)
DA626211 Kidney .c 753 to 1297 2 to 546   tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
DA626416 Kidney .c 891 to 1468 2 to 581   tiling clone, capped   580/580
(100 %)
2 diff
(99.7 %id)
AK055759 Kidney .c 1180 to 3491 1 to 2330   tiling clone, available from FLJ,   2330/2330
(100 %)
9 diff
(99.7 %id)
DA621556 Kidney .c 1181 to 1740 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DB341804 testis .c 2958 to 3491 534 to 1   tiling clone,   534/534
(100 %)
2 diff
(99.7 %id)
DB320413 Kidney .c 2961 to 3491 531 to 1   tiling clone,   531/531
(100 %)
2 diff
(99.7 %id)
BC013036 Lung, small cell carcinoma .d 1 to 1208 1 to 1211 A82T Q114R tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1211/1211
(100 %)
5 diff
(99.6 %id)
NM_145051.3   .d 1 to 1208 1 to 1208 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1208/1208
(100 %)
0 diff
(100 %id)
BE266322 lung, small cell carcinoma .d 20 to 555 1 to 537       537/537
(100 %)
5 diff
(99.1 %id)
DA634707 Kidney .e 1 to 569 2 to 570   tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI