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Gene C11orf49TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
563 supporting clones for gene C11orf49 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BU838576 dorsal root ganglia .a 1 to 894 1 to 895   tiling clone,   895/936
(95 %)
7 diff
(99.3 %id)
AA161515 Pancreas .a 423 to 988 1 to 563   tiling clone,   563/644
(87 %)
3 diff
(99.6 %id)
AA160094 Pancreas .a 423 to 822 1 to 411       411/411
(100 %)
11 diff
(97.4 %id)
AA159510 Pancreas .a 1920 to 2321 401 to 1   tiling clone,   401/401
(100 %)
1 diff
(99.8 %id)
AA165683 Pancreas .a 1988 to 2343 365 to 1   tiling clone,   365/365
(100 %)
27 diff
(92.7 %id)
BQ421810 melanotic melanoma, skin .b 1 to 792 12 to 804   tiling clone,   793/902
(87 %)
18 diff
(98.1 %id)
DC311390 alzheimer cortex .b 92 to 646 1 to 555   tiling clone,   555/555
(100 %)
0 diff
(100 %id)
CV807924 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 117 to 820 1 to 706       706/725
(97 %)
15 diff
(98.0 %id)
BM927161 brain .b 119 to 822 50 to 756       707/1169
(60 %)
18 diff
(98.5 %id)
AA410730 ovarian tumor, ovary .b 137 to 562 1 to 425       425/425
(100 %)
7 diff
(98.4 %id)
BY795444 eye .b 138 to 764 1 to 627       627/627
(100 %)
0 diff
(100 %id)
AK300813   .b 141 to 1667 1 to 1527   tiling clone,   1527/1527
(100 %)
0 diff
(100 %id)
CN393822 embryonic stem cells, DMSO-treated H9 cellline .b 157 to 655 1 to 499       499/499
(100 %)
0 diff
(100 %id)
BU152673 carcinoma, cell line, Prostate .b 159 to 711 1 to 558       558/1070
(52 %)
14 diff
(98.7 %id)
BQ928649 carcinoma, cell line, Prostate .b 159 to 1059 1 to 908       908/915
(99 %)
17 diff
(98.2 %id)
BQ952899 carcinoma, cell line, Prostate .b 159 to 710 1 to 552       552/981
(56 %)
7 diff
(99.3 %id)
AA173349   .b 169 to 585 2 to 418       417/418
(99 %)
0 diff
(100 %id)
DC311690 alzheimer cortex .b 213 to 704 52 to 545       494/545
(90 %)
6 diff
(98.9 %id)
DC354613 lung .b 213 to 711 72 to 571       500/571
(87 %)
1 diff
(99.9 %id)
BI827433 brain, medulla .b 213 to 567 91 to 444       354/701
(50 %)
11 diff
(98.5 %id)
TI_57174616   .b 213 to 567 119 to 472       354/729
(48 %)
11 diff
(98.5 %id)
DC387062   .b 213 to 697 73 to 558       486/558
(87 %)
1 diff
(99.9 %id)
AA380203   .b 344 to 535 57 to 248       192/248
(77 %)
5 diff
(98.0 %id)
DR763319 embryonic stem .b 899 to 1666 1 to 768       768/768
(100 %)
1 diff
(99.9 %id)
TI_149289812   .b 945 to 1661 802 to 87   AAA   716/716
(100 %)
7 diff
(99.1 %id)
CR739026 germinal center B cell .b 982 to 1667 1 to 686   AAA   686/686
(100 %)
0 diff
(100 %id)
CD370693 Alveolar Macrophage, lung .b 1010 to 1667 676 to 19   AAA   658/658
(100 %)
2 diff
(99.7 %id)
DT217147 brain .b 1056 to 1647 1 to 591       591/591
(100 %)
1 diff
(99.9 %id)
CN484866 eye .b 1064 to 1664 1 to 600       600/600
(100 %)
5 diff
(99.2 %id)
AI885009 anaplastic oligodendroglioma, brain .b 1097 to 1667 586 to 15   AAA   572/572
(100 %)
1 diff
(99.9 %id)
TI_57150051   .b 1104 to 1667 21 to 582   AAA   562/582
(96 %)
6 diff
(99.0 %id)
BI763384 pooled colon, kidney, stomach .b 1112 to 1667 1 to 554   AAA   554/554
(100 %)
3 diff
(99.5 %id)
AL576217 placenta, Placenta Cot 25-normalized .b 1126 to 1588 466 to 4       463/466
(99 %)
0 diff
(100 %id)
BM671450 eye, Retina Foveal and Macular .b 1145 to 1667 541 to 19   AAA   523/532
(98 %)
0 diff
(100 %id)
TI_151764907   .b 1145 to 1667 94 to 616   AAA   523/523
(100 %)
2 diff
(99.7 %id)
AI568560 anaplastic oligodendroglioma, brain .b 1147 to 1667 521 to 1       521/521
(100 %)
2 diff
(99.7 %id)
BM972977 lung .b 1157 to 1661 523 to 19   AAA   505/505
(100 %)
1 diff
(99.9 %id)
BQ447708 Knee, Osteoarthritic Cartilage .b 1162 to 1667 523 to 19   AAA   505/505
(100 %)
2 diff
(99.7 %id)
AW571806 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1165 to 1669 507 to 3       505/507
(99 %)
0 diff
(100 %id)
BF058333 fibrotheoma, ovary .b 1190 to 1667 478 to 1       478/478
(100 %)
1 diff
(99.8 %id)
AI435918 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1191 to 1668 478 to 1       478/478
(100 %)
0 diff
(100 %id)
BE546668 cervical carcinoma cell line, cervix .b 1195 to 1668 1 to 476       476/476
(100 %)
6 diff
(98.8 %id)
AI673276 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 1200 to 1667 484 to 16   AAA   469/469
(100 %)
1 diff
(99.8 %id)
CN393824 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1201 to 1495 1 to 295       295/295
(100 %)
0 diff
(100 %id)
DB543457 hippocampus .b 1202 to 1666 1 to 465     Submitted on the opposite strand 465/466
(99 %)
1 diff
(99.8 %id)
DB543580 hippocampus .b 1203 to 1666 1 to 464     Submitted on the opposite strand 464/465
(99 %)
1 diff
(99.8 %id)
AA858300 Kidney .b 1206 to 1667 460 to 2       459/460
(99 %)
0 diff
(100 %id)
AA587081 colon, colon tumor RER+ .b 1210 to 1669 464 to 5       460/464
(99 %)
0 diff
(100 %id)
AW055088 brain, glioblastoma (pooled) .b 1210 to 1667 458 to 1       458/458
(100 %)
1 diff
(99.8 %id)
AW130921 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 1211 to 1667 468 to 12   AAA   457/457
(100 %)
0 diff
(100 %id)
AW272747 colon, moderately-differentiated adenocarcinoma .b 1211 to 1669 465 to 7       459/465
(98 %)
0 diff
(100 %id)
T30182 uterus .b 1212 to 1667 456 to 1       456/458
(99 %)
3 diff
(99.4 %id)
AW150973 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1214 to 1669 462 to 6       457/462
(98 %)
0 diff
(100 %id)
N20959 melanocyte .b 1215 to 1667 456 to 1       456/456
(100 %)
8 diff
(98.3 %id)
AI359019 brain, glioblastoma (pooled) .b 1215 to 1667 454 to 1       454/454
(100 %)
1 diff
(99.8 %id)
AI146337 brain, glioblastoma (pooled) .b 1217 to 1669 457 to 5       453/457
(99 %)
0 diff
(100 %id)
DB520196 testis .b 1218 to 1667 1 to 450     Submitted on the opposite strand 450/450
(100 %)
0 diff
(100 %id)
BM987146 mixed .b 1218 to 1667 468 to 19   AAA   450/455
(98 %)
1 diff
(99.8 %id)
AI912168 carcinoid, lung .b 1221 to 1669 450 to 2       449/450
(99 %)
0 diff
(100 %id)
AI423486 brain, glioblastoma (pooled) .b 1223 to 1667 444 to 1       444/447
(99 %)
4 diff
(99.2 %id)
AA804660 germinal center B cell .b 1224 to 1669 453 to 8       446/453
(98 %)
0 diff
(100 %id)
AA866191 germinal center B cell .b 1224 to 1667 465 to 23   AAA   443/443
(100 %)
2 diff
(99.6 %id)
AI364079 anaplastic oligodendroglioma, brain .b 1224 to 1645 424 to 3       422/424
(99 %)
0 diff
(100 %id)
AA481182 germinal center B cell .b 1225 to 1424 1 to 200   fully sequenced,   200/200
(100 %)
1 diff
(99.5 %id)
BM668330 eye, Retina Foveal and Macular .b 1235 to 1667 452 to 19   AAA   434/438
(99 %)
5 diff
(98.9 %id)
AI803850 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 1238 to 1668 431 to 1       431/431
(100 %)
7 diff
(98.4 %id)
AI635947 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 1238 to 1668 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AA625900   .b 1262 to 1670 422 to 14   tiling clone, AAA   409/409
(100 %)
4 diff
(99.1 %id)
AA594580 colon, colon tumor RER+ .b 1262 to 1666 405 to 1       405/405
(100 %)
0 diff
(100 %id)
AA613120 colon, colon tumor RER+ .b 1262 to 1633 372 to 1       372/372
(100 %)
2 diff
(99.5 %id)
AW151080 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1267 to 1667 401 to 1       401/401
(100 %)
0 diff
(100 %id)
AW511998 lymph node, lymphoma, follicular mixed small and largecell .b 1267 to 1669 406 to 4       403/406
(99 %)
0 diff
(100 %id)
BM807784 brain, hippocampus .b 1269 to 1676 1 to 408       408/1304
(31 %)
12 diff
(99.1 %id)
AA725254 parathyroid gland, parathyroid tumor .b 1279 to 1667 425 to 38   AAA   388/388
(100 %)
2 diff
(99.5 %id)
AA173299   .b 1279 to 1669 398 to 6       393/399
(98 %)
0 diff
(100 %id)
BQ021585 lung, Metastatic Chondrosarcoma .b 1280 to 1667 406 to 19   AAA   388/396
(97 %)
0 diff
(100 %id)
TI_154033106   .b 1280 to 1667 471 to 84   AAA   388/955
(40 %)
0 diff
(100 %id)
CA443205 lung, Metastatic Chondrosarcoma .b 1280 to 1667 406 to 19   AAA   388/397
(97 %)
0 diff
(100 %id)
CA443343 lung, Metastatic Chondrosarcoma .b 1280 to 1667 406 to 19   AAA   388/397
(97 %)
0 diff
(100 %id)
AA833670   .b 1281 to 1669 389 to 2       388/389
(99 %)
0 diff
(100 %id)
AA235734 ovarian tumor, ovary .b 1286 to 1667 382 to 1       382/382
(100 %)
0 diff
(100 %id)
AA602420   .b 1289 to 1669 387 to 8       380/387
(98 %)
0 diff
(100 %id)
AI682092 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 1296 to 1667 437 to 65   AAA   373/373
(100 %)
3 diff
(99.2 %id)
R58847   .b 1298 to 1661 365 to 1       365/365
(100 %)
3 diff
(99.2 %id)
AA514571 colon .b 1303 to 1668 366 to 1       366/366
(100 %)
0 diff
(100 %id)
BF109074 pooled .b 1307 to 1667 377 to 12   AAA   366/366
(100 %)
14 diff
(96.2 %id)
AA885829 carcinoid, lung .b 1316 to 1669 354 to 2       353/354
(99 %)
0 diff
(100 %id)
AA890142 pooled .b 1324 to 1669 347 to 2       346/347
(99 %)
0 diff
(100 %id)
CA434504 lung, Lung Focal Fibrosis .b 1331 to 1667 355 to 19   AAA   337/337
(100 %)
1 diff
(99.8 %id)
AI560736 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1332 to 1668 337 to 1       337/337
(100 %)
1 diff
(99.8 %id)
BE243274 leukopheresis .b 1338 to 1666 330 to 2       329/330
(99 %)
0 diff
(100 %id)
EC446626 Prostate .b 1357 to 1461 1 to 102       102/102
(100 %)
3 diff
(97.1 %id)
AA706532   .b 1364 to 1667 335 to 32   AAA   304/304
(100 %)
0 diff
(100 %id)
AI198196 anaplastic oligodendroglioma, brain .b 1374 to 1648 275 to 1       275/275
(100 %)
1 diff
(99.7 %id)
AI364023 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 1374 to 1667 307 to 14   AAA   294/294
(100 %)
0 diff
(100 %id)
AW051884 brain, glioblastoma (pooled) .b 1374 to 1667 294 to 1       294/296
(99 %)
0 diff
(100 %id)
AI933362 anaplastic oligodendroglioma, brain .b 1375 to 1667 313 to 21   AAA   293/293
(100 %)
2 diff
(99.4 %id)
AI471118 brain, glioblastoma (pooled) .b 1380 to 1667 288 to 1       288/288
(100 %)
1 diff
(99.7 %id)
AW798944 uterus .b 1393 to 1497 1 to 105       105/105
(100 %)
0 diff
(100 %id)
AA481496 germinal center B cell .b 1394 to 1667 312 to 33   fully sequenced, AAA   280/280
(100 %)
2 diff
(99.3 %id)
BQ023788 placenta .b 1405 to 1667 281 to 19   AAA   263/263
(100 %)
0 diff
(100 %id)
AA640036 lung, lung tumor .b 1406 to 1668 264 to 1       264/264
(100 %)
1 diff
(99.7 %id)
BQ022397 placenta .b 1408 to 1667 278 to 19   AAA   260/260
(100 %)
0 diff
(100 %id)
AW128982 brain, tumor, 5 pooled (see description) .b 1411 to 1667 293 to 37   AAA   257/257
(100 %)
12 diff
(95.4 %id)
AI950170 anaplastic oligodendroglioma, brain .b 1425 to 1651 230 to 4       227/230
(98 %)
0 diff
(100 %id)
AI804314 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1433 to 1669 238 to 2       237/238
(99 %)
0 diff
(100 %id)
AW026756 pooled germ cell tumors .b 1465 to 1667 214 to 12   AAA   203/203
(100 %)
1 diff
(99.6 %id)
AI631707 pooled germ cell tumors .b 1467 to 1667 212 to 12   AAA   201/201
(100 %)
0 diff
(100 %id)
BE502372 pooled germ cell tumors .b 1467 to 1667 212 to 12   AAA   201/201
(100 %)
1 diff
(99.6 %id)
BU943966 adenocarcinoma, cell line, breast .b 1467 to 1667 1 to 201   AAA   201/201
(100 %)
0 diff
(100 %id)
N66370 cochlea, ear .b 1476 to 1668 193 to 1       193/193
(100 %)
0 diff
(100 %id)
AW149444 brain, medulloblastoma .b 1487 to 1669 184 to 2       183/184
(99 %)
0 diff
(100 %id)
BE241557 leukopheresis .b 1488 to 1666 180 to 2       179/180
(99 %)
0 diff
(100 %id)
AW236424 pooled germ cell tumors .b 1504 to 1667 184 to 21   AAA   164/164
(100 %)
3 diff
(98.2 %id)
AI648421 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1513 to 1669 161 to 5       157/161
(97 %)
0 diff
(100 %id)
AA576794 colon, colon tumor RER+ .b 1522 to 1669 149 to 2       148/149
(99 %)
0 diff
(100 %id)
AA484087 Ewing's sarcoma .b 1527 to 1670 156 to 14       143/156
(91 %)
0 diff
(100 %id)
FN046334 breast carcinoma .b 1548 to 1659 1 to 112       112/112
(100 %)
0 diff
(100 %id)
F02611 brain, total brain .c -329 to -47 283 to 1       283/283
(100 %)
0 diff
(100 %id)
BX482227   .c -263 to 156 29 to 448       420/448
(93 %)
6 diff
(98.7 %id)
AA558710 Prostate, prostatic intraepithelial neoplasia - highgrade .c -223 to 195 8 to 426       419/426
(98 %)
6 diff
(98.6 %id)
DA834419 placenta .c -220 to 546 2 to 764   capped   763/763
(100 %)
3 diff
(99.7 %id)
BQ428072 melanotic melanoma, skin .c 1 to 445 1 to 445   tiling clone,   445/876
(50 %)
0 diff
(100 %id)
DC330442 hippocampus .c 150 to 715 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
NM_001003677.1   .c 191 to 1917 1 to 1727 exact RefSeq, AAA   1727/1727
(100 %)
0 diff
(100 %id)
DA604703   .c 222 to 736 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
DB166504 thyroid gland .c 227 to 939 2 to 711   capped   710/764
(92 %)
8 diff
(99.0 %id)
DA733381   .c 234 to 720 14 to 499   capped   486/486
(100 %)
2 diff
(99.6 %id)
Z43138 brain, total brain .c 259 to 576 1 to 318       318/318
(100 %)
2 diff
(99.4 %id)
BC013988 Colon, adenocarcinoma .c 269 to 1917 1 to 1649 exact tiling clone, available from MGC, AAA   1649/1649
(100 %)
0 diff
(100 %id)
BM703074 eye, human retina .c 285 to 743 1 to 459       459/459
(100 %)
0 diff
(100 %id)
BX459742 brain, fetal brain .c 288 to 1118 1 to 831       831/1100
(75 %)
2 diff
(99.9 %id)
CR605648 fetal brain .c 289 to 1894 1 to 1606 exact     1606/1606
(100 %)
0 diff
(100 %id)
AL534900 brain, fetal brain .c 289 to 1084 1 to 795   fully sequenced,   795/795
(100 %)
1 diff
(99.9 %id)
AW248279 lung, small cell carcinoma .c 295 to 841 10 to 556       547/556
(98 %)
6 diff
(99.0 %id)
BX374980 Neuroblastoma Cot 25-normalized .c 296 to 1117 1 to 822       820/822
(99 %)
10 diff
(98.8 %id)
CR457351   .c 297 to 1308 1 to 1012       1012/1014
(99 %)
1 diff
(100.0 %id)
TI_1948091816   .c 297 to 1181 140 to 1036       897/1370
(65 %)
32 diff
(97.7 %id)
TI_1948091968   .c 297 to 992 138 to 830   fully sequenced,   693/830
(83 %)
6 diff
(99.3 %id)
TI_1948092124   .c 297 to 692 139 to 534   fully sequenced,   396/534
(74 %)
6 diff
(98.9 %id)
BI489928 pooled brain, lung, testis .c 305 to 907 1 to 603       603/603
(100 %)
2 diff
(99.7 %id)
TI_43960638   .c 342 to 907 110 to 675       566/675
(83 %)
6 diff
(99.2 %id)
BE729832 melanotic melanoma, skin .c 446 to 1280 51 to 871       823/910
(90 %)
37 diff
(96.0 %id)
AW250345 lung, small cell carcinoma .c 460 to 1040 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
F07609 brain, total brain .c 462 to 745 1 to 284       284/284
(100 %)
1 diff
(99.7 %id)
BG680148 skin, squamous cell carcinoma .c 477 to 1269 1 to 791       793/972
(81 %)
17 diff
(98.3 %id)
TI_1948092125   .c 663 to 1309 771 to 124   fully sequenced,   648/771
(84 %)
6 diff
(99.3 %id)
AA281341 germinal center B cell .c 708 to 1134 1 to 426       426/426
(100 %)
1 diff
(99.8 %id)
TI_57168305   .c 751 to 1637 33 to 929       897/938
(95 %)
40 diff
(95.8 %id)
BI837228 pooled pancreas and spleen .c 752 to 1637 1 to 896       896/905
(99 %)
36 diff
(96.1 %id)
BE786303 large cell carcinoma, lung .c 892 to 1528 1 to 632       632/632
(100 %)
12 diff
(98.2 %id)
BI198883 brain, neuroblastoma .c 953 to 1686 1 to 742       742/752
(98 %)
14 diff
(98.2 %id)
BI195028 brain, neuroblastoma .c 953 to 1613 1 to 666       666/944
(70 %)
34 diff
(96.4 %id)
TI_1948091969   .c 962 to 1309 468 to 120   fully sequenced,   349/468
(74 %)
0 diff
(100 %id)
AL534899 brain, fetal brain .c 1023 to 1894 873 to 1   fully sequenced,   873/873
(100 %)
7 diff
(99.2 %id)
BX374299   .c 1027 to 1911 900 to 8       893/902
(99 %)
0 diff
(100 %id)
BX350904 Neuroblastoma Cot 25-normalized .c 1134 to 1911 779 to 1       779/783
(99 %)
19 diff
(97.6 %id)
BI490566 pooled brain, lung, testis .c 1138 to 1868 746 to 1       746/802
(93 %)
30 diff
(96.3 %id)
TI_43960639   .c 1138 to 1868 746 to 1       746/802
(93 %)
30 diff
(96.3 %id)
BP430812   .c 1150 to 1525 1 to 376       376/376
(100 %)
3 diff
(99.3 %id)
BX412581 brain, fetal brain .c 1157 to 1913 755 to 1       755/929
(81 %)
13 diff
(98.7 %id)
BU532633 mixed (pool of 40 RNAs) .c 1272 to 1574 1 to 314       314/869
(36 %)
5 diff
(99.5 %id)
BQ302703 breast .c 1274 to 1661 404 to 17       388/404
(96 %)
0 diff
(100 %id)
DB320041   .c 1366 to 1917 552 to 1       552/552
(100 %)
1 diff
(99.9 %id)
AW245059 lung, small cell carcinoma .c 1389 to 1893 515 to 11   AAA   505/505
(100 %)
1 diff
(99.9 %id)
DB382564 thyroid gland .c 1419 to 1917 498 to 1       498/561
(88 %)
15 diff
(97.4 %id)
DB365297   .c 1421 to 1917 496 to 1       496/501
(99 %)
6 diff
(98.9 %id)
BU729283 eye, human retina .c 1423 to 1917 513 to 19   AAA   495/495
(100 %)
1 diff
(99.8 %id)
FN129117 breast carcinoma .c 1568 to 1661 97 to 1     Submitted on the opposite strand 97/98
(98 %)
2 diff
(98.0 %id)
AW251082 lung, small cell carcinoma .c 1571 to 1917 357 to 11   AAA   347/347
(100 %)
1 diff
(99.8 %id)
Z40658 brain, total brain .c 1628 to 1917 290 to 1       290/290
(100 %)
0 diff
(100 %id)
NM_024113.3   .d 1 to 1709 1 to 1709 exact RefSeq, AAA   1709/1709
(100 %)
0 diff
(100 %id)
AK315639 synovial membrane tissue from rheumatoidarthritis .d 42 to 1102 1 to 1061 Q231* tiling clone,   1061/1061
(100 %)
1 diff
(100.0 %id)
BC001860 Lung, small cell carcinoma .d 44 to 1709 1 to 1666 exact tiling clone, available from MGC, AAA   1666/1666
(100 %)
0 diff
(100 %id)
CR592241 placenta .d 48 to 1673 1 to 1626 exact     1626/1626
(100 %)
0 diff
(100 %id)
CR599376 Neuroblastoma Cot 50-normalized .d 48 to 1692 1 to 1645 exact     1645/1645
(100 %)
0 diff
(100 %id)
CR604751 fetal brain .d 48 to 1703 1 to 1656 exact     1656/1656
(100 %)
0 diff
(100 %id)
AL530972 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .d 48 to 1057 1 to 1004       1004/1066
(94 %)
11 diff
(99.0 %id)
AL542938 placenta .d 48 to 863 1 to 817   fully sequenced,   817/817
(100 %)
0 diff
(100 %id)
TI_57241220   .d 48 to 1001 25 to 978       956/981
(97 %)
29 diff
(97.1 %id)
BI913253 brain .d 54 to 1001 1 to 948       950/951
(99 %)
23 diff
(97.6 %id)
BX460793 brain, fetal brain .d 58 to 894 10 to 846   fully sequenced,   837/846
(98 %)
6 diff
(99.3 %id)
BX404194 neuroblastoma .d 62 to 1192 1 to 1128 E49R Y50I N52* fully sequenced,   1128/1128
(100 %)
24 diff
(97.9 %id)
CR610217 neuroblastoma .d 62 to 1703 1 to 1642 exact     1642/1642
(100 %)
0 diff
(100 %id)
TI_44185330   .d 62 to 1028 33 to 998       966/999
(96 %)
23 diff
(97.7 %id)
BI522592 brain .d 70 to 1028 1 to 959       959/960
(99 %)
17 diff
(98.3 %id)
AK025863   .d 81 to 1709 1 to 1629 T88A available from FLJ, AAA   1629/1629
(100 %)
1 diff
(100.0 %id)
CR618684 Neuroblastoma Cot 25-normalized .d 84 to 1693 1 to 1610 exact     1610/1610
(100 %)
0 diff
(100 %id)
AL525467 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 84 to 894 1 to 809   fully sequenced,   809/809
(100 %)
0 diff
(100 %id)
CR626306 adult brain .d 87 to 1682 1 to 1596 exact     1596/1596
(100 %)
0 diff
(100 %id)
BX428155 adult brain, brain .d 87 to 913 1 to 828   fully sequenced,   828/828
(100 %)
2 diff
(99.8 %id)
DR762869 embryonic stem .d 89 to 938 7 to 856       850/856
(99 %)
6 diff
(99.3 %id)
BM926695 pooled lung and spleen .d 91 to 1195 1 to 1119 E270X Q277X L281P V282G N283Q ...     1119/1121
(99 %)
40 diff
(96.5 %id)
CR619964 fetal brain .d 98 to 1705 1 to 1608 exact     1608/1608
(100 %)
0 diff
(100 %id)
BM919914 pooled pancreas and spleen .d 106 to 1010 1 to 909       909/1009
(90 %)
8 diff
(99.3 %id)
DR760840 embryonic stem .d 115 to 981 1 to 867       867/867
(100 %)
0 diff
(100 %id)
CR624053 Placenta Cot 25-normalized .d 255 to 1693 1 to 1439       1439/1439
(100 %)
0 diff
(100 %id)
AL545992 placenta, Placenta Cot 25-normalized .d 255 to 894 1 to 640   fully sequenced,   640/640
(100 %)
0 diff
(100 %id)
N33896 melanocyte .d 255 to 569 25 to 339       315/339
(92 %)
7 diff
(98.0 %id)
BI765641 pooled colon, kidney, stomach .d 255 to 1042 74 to 862       789/862
(91 %)
13 diff
(98.5 %id)
BM044427 carcinoma, cell line, Prostate .d 255 to 1082 59 to 887       829/888
(93 %)
24 diff
(97.3 %id)
TI_57146978   .d 255 to 1042 74 to 862       789/862
(91 %)
13 diff
(98.5 %id)
BE732862 choriocarcinoma, placenta .d 258 to 1009 139 to 898       760/899
(84 %)
57 diff
(93.7 %id)
BG477786 melanotic melanoma, skin .d 274 to 1144 1 to 873       873/881
(99 %)
13 diff
(98.6 %id)
BQ717043 sympathetic trunk .d 274 to 1048 1 to 782       782/825
(94 %)
8 diff
(99.1 %id)
Z45256 brain, total brain .d 281 to 570 1 to 290       290/290
(100 %)
2 diff
(99.4 %id)
AK293609 cerebellum .d 379 to 1280 167 to 1069       903/1069
(84 %)
6 diff
(99.5 %id)
CN302855 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 379 to 961 146 to 730       585/730
(80 %)
6 diff
(99.2 %id)
BI552020 brain, hippocampus .d 379 to 1000 172 to 787       618/825
(74 %)
17 diff
(98.0 %id)
TI_44171824   .d 379 to 1000 251 to 866       616/904
(68 %)
19 diff
(97.9 %id)
BG469265 adenocarcinoma cell line, colon .d 386 to 1056 72 to 745       674/747
(90 %)
17 diff
(97.8 %id)
BX389773 Placenta Cot 25-normalized .d 387 to 1303 1 to 912       912/912
(100 %)
29 diff
(96.9 %id)
BF344599 brain, glioblastoma with EGFR amplification .d 389 to 1063 40 to 712       673/834
(80 %)
21 diff
(97.5 %id)
BG820334 anaplastic oligodendroglioma with 1p/19qloss, brain .d 428 to 1109 1 to 683       683/683
(100 %)
1 diff
(99.9 %id)
BE278058 choriocarcinoma, placenta .d 558 to 1200 1 to 640       640/642
(99 %)
14 diff
(97.9 %id)
BQ674588 epidermoid carcinoma, cell line, salivary gland .d 578 to 1118 1 to 541       541/1028
(52 %)
17 diff
(98.4 %id)
BQ674171 epidermoid carcinoma, cell line, salivary gland .d 578 to 1466 1 to 906       906/908
(99 %)
25 diff
(97.3 %id)
BQ675317 epidermoid carcinoma, cell line, salivary gland .d 578 to 1482 1 to 908       908/909
(99 %)
30 diff
(96.7 %id)
BG119732 adenocarcinoma, cell line, Liver .d 586 to 1150 1 to 567       567/1003
(56 %)
10 diff
(99.1 %id)
CN302854 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 618 to 1129 8 to 519       512/519
(98 %)
6 diff
(98.9 %id)
CN302853 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 632 to 1301 1 to 671       671/672
(99 %)
2 diff
(99.8 %id)
CR594959 Placenta Cot 25-normalized .d 676 to 1681 1 to 1006       1006/1006
(100 %)
0 diff
(100 %id)
AL551325 placenta, Placenta Cot 25-normalized .d 676 to 894 1 to 219   fully sequenced,   219/219
(100 %)
0 diff
(100 %id)
BX365906 Neuroblastoma Cot 50-normalized .d 762 to 1692 932 to 1       932/941
(99 %)
18 diff
(98.1 %id)
AL563903 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .d 809 to 1553 742 to 1       745/742
(100 %)
35 diff
(95.3 %id)
BX435133 brain, fetal brain .d 833 to 1703 872 to 1   fully sequenced,   872/872
(100 %)
3 diff
(99.7 %id)
AL571526 placenta, Placenta Cot 25-normalized .d 833 to 1662 857 to 28   fully sequenced, AAA   830/844
(98 %)
1 diff
(99.9 %id)
AL575062 placenta, Placenta Cot 25-normalized .d 833 to 1681 848 to 1   fully sequenced,   848/848
(100 %)
0 diff
(100 %id)
AL569696 placenta .d 834 to 1614 835 to 56   fully sequenced, AAA   780/780
(100 %)
26 diff
(96.7 %id)
BM705062 eye, RPE and Choroid .d 837 to 1166 1 to 330   fully sequenced,   330/330
(100 %)
0 diff
(100 %id)
AL562546 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 859 to 1682 831 to 12   fully sequenced,   820/831
(98 %)
2 diff
(99.8 %id)
TI_151769463   .d 859 to 1446 152 to 739       588/1338
(43 %)
18 diff
(98.7 %id)
BU145157 dorsal root ganglia .d 863 to 1711 1 to 855       855/865
(98 %)
10 diff
(98.9 %id)
BX428154 adult brain, brain .d 883 to 1648 800 to 35   fully sequenced,   766/800
(95 %)
2 diff
(99.8 %id)
BM793084 Ascites, stomach .d 918 to 1330 1 to 413       413/413
(100 %)
0 diff
(100 %id)
BM663876 eye, RPE and Choroid .d 1136 to 1709 591 to 19   fully sequenced, AAA   573/573
(100 %)
4 diff
(99.4 %id)
BX454109 neuroblastoma .d 1164 to 1703 541 to 1   fully sequenced,   541/541
(100 %)
15 diff
(97.3 %id)
N25260 melanocyte .d 1274 to 1711 443 to 5       439/444
(98 %)
0 diff
(100 %id)
F04154 brain, total brain .d 1443 to 1709 267 to 1       267/267
(100 %)
0 diff
(100 %id)
DA561383 heart .e 1 to 571 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB027437 testis .e 1 to 594 2 to 595   tiling clone, capped   594/594
(100 %)
0 diff
(100 %id)
NM_001003678.1   .e 2 to 1214 1 to 1213 exact RefSeq, AAA   1213/1213
(100 %)
0 diff
(100 %id)
DA202410 brain .e 3 to 574 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA913036   .e 3 to 546 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BI551591 brain, hippocampus .e 6 to 577 1 to 575       575/575
(100 %)
10 diff
(98.3 %id)
TI_44171003   .e 11 to 577 126 to 695       570/695
(82 %)
10 diff
(98.6 %id)
DA063559 cerebellum .e 21 to 581 2 to 562   capped   561/562
(99 %)
2 diff
(99.7 %id)
DA369815 subthalamic nucleus .e 21 to 568 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
BI767672 pooled lung and spleen .e 22 to 902 1 to 883       883/884
(99 %)
17 diff
(98.1 %id)
TI_57183677   .e 22 to 902 34 to 916       883/917
(96 %)
22 diff
(97.7 %id)
DB474627 hippocampus .e 32 to 387 1 to 356       356/503
(70 %)
3 diff
(99.5 %id)
DB474747 hippocampus .e 32 to 549 1 to 518       518/518
(100 %)
2 diff
(99.7 %id)
DC359063 lung .e 32 to 581 1 to 552       550/552
(99 %)
4 diff
(99.3 %id)
DA849210 placenta .e 33 to 535 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
DB171921 kidney, tumor tissue .e 33 to 603 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
TI_57217569   .e 34 to 846 65 to 879       815/879
(92 %)
13 diff
(98.6 %id)
BG339920 leiomyosarcoma cell line, uterus .e 35 to 837 1 to 803       803/833
(96 %)
17 diff
(98.0 %id)
DA088443 cerebellum .e 36 to 587 2 to 554   capped   551/553
(99 %)
1 diff
(99.9 %id)
BI821685 pooled brain, lung, testis .e 36 to 810 1 to 777       777/778
(99 %)
9 diff
(98.9 %id)
TI_57199205   .e 36 to 810 66 to 842       777/843
(92 %)
15 diff
(98.3 %id)
BM847972 myeloma .e 37 to 621 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DA130100 alzheimer cortex .e 38 to 677 2 to 641   capped   640/640
(100 %)
0 diff
(100 %id)
DB024726 testis .e 38 to 596 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB037431 testis .e 38 to 608 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
BI754147 brain .e 39 to 846 1 to 810       810/810
(100 %)
7 diff
(99.2 %id)
TI_57178384   .e 39 to 916 25 to 906       882/911
(96 %)
25 diff
(97.3 %id)
CA487481   .e 40 to 861 1 to 823       823/884
(93 %)
2 diff
(99.8 %id)
BE241732 leukopheresis .e 40 to 370 1 to 330       330/330
(100 %)
7 diff
(97.9 %id)
BE243093 leukopheresis .e 40 to 228 1 to 189       189/189
(100 %)
2 diff
(99.0 %id)
BE243142 leukopheresis .e 40 to 491 1 to 451       451/451
(100 %)
6 diff
(98.7 %id)
BG401139 Kidney .e 41 to 663 1 to 620       620/885
(70 %)
15 diff
(98.4 %id)
DB049060 testis .e 41 to 588 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA130487 alzheimer cortex .e 43 to 613 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA130510 alzheimer cortex .e 43 to 610 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA140181 alzheimer cortex .e 43 to 592 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA362571 subthalamic nucleus .e 43 to 599 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA682149 ovary .e 43 to 607 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB009859 colon, tumor tissue .e 43 to 579 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB023005 testis .e 43 to 605 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB041672 testis .e 43 to 599 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA366732 subthalamic nucleus .e 44 to 611 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA976345 synovial membrane tissue from rheumatioidarthritis .e 44 to 604 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BI768303 pooled lung and spleen .e 45 to 916 1 to 876       876/881
(99 %)
17 diff
(98.1 %id)
BU187357 epithelioid carcinoma, Pancreas .e 45 to 387 1 to 343       343/737
(46 %)
3 diff
(99.6 %id)
DA140113 alzheimer cortex .e 47 to 594 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
BI764929 pooled colon, kidney, stomach .e 47 to 873 1 to 823       823/984
(83 %)
14 diff
(98.6 %id)
TI_57149849   .e 47 to 873 32 to 854       823/1015
(81 %)
19 diff
(98.2 %id)
DA266489 caudate nucleus .e 48 to 606 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB038974 testis .e 48 to 598 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA004953   .e 49 to 545 2 to 499   capped   498/498
(100 %)
4 diff
(99.2 %id)
DA297181 hippocampus .e 49 to 614 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
AL553119 placenta, Placenta Cot 25-normalized .e 49 to 478 1 to 430       430/437
(98 %)
4 diff
(99.1 %id)
BF984844 duodenal adenocarcinoma, cell line, small intestine .e 49 to 752 13 to 722       710/1036
(68 %)
41 diff
(96.1 %id)
BI824194 pooled brain, lung, testis .e 49 to 929 1 to 885       885/903
(98 %)
10 diff
(98.9 %id)
BI758552 brain .e 49 to 930 28 to 907       880/982
(89 %)
16 diff
(98.4 %id)
TI_57215687   .e 49 to 930 28 to 907       880/982
(89 %)
16 diff
(98.4 %id)
TI_57202274   .e 49 to 929 38 to 922       885/940
(94 %)
16 diff
(98.3 %id)
DA082368 cerebellum .e 51 to 619 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB190982 lung, tumor tissue .e 51 to 625 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB266146 uterus .e 51 to 609 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB274569 uterus .e 51 to 616 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BE856783 pooled .e 53 to 375 234 to 556     Submitted on the opposite strand 323/556
(58 %)
6 diff
(99.0 %id)
BI462606 testis .e 53 to 750 1 to 698       698/698
(100 %)
3 diff
(99.6 %id)
DA056125 cerebellum .e 54 to 635 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA080961 cerebellum .e 54 to 608 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB059644 testis .e 54 to 585 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
BI836770 pooled pancreas and spleen .e 56 to 864 1 to 816       814/922
(88 %)
18 diff
(98.1 %id)
TI_57164262   .e 56 to 864 76 to 891       814/997
(81 %)
24 diff
(97.6 %id)
TI_57215222   .e 63 to 902 56 to 897       842/897
(93 %)
12 diff
(98.7 %id)
DA967748 stomach .e 63 to 522 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
BE266764 lung, small cell carcinoma .e 64 to 738 1 to 673       673/752
(89 %)
8 diff
(99.0 %id)
DT220771 brain .e 65 to 668 1 to 601       601/601
(100 %)
4 diff
(99.4 %id)
BG742991 skin .e 65 to 886 1 to 822       822/822
(100 %)
11 diff
(98.7 %id)
BI916715 brain .e 65 to 758 1 to 694       694/703
(98 %)
2 diff
(99.8 %id)
TI_57240213   .e 65 to 758 31 to 724       694/733
(94 %)
8 diff
(99.0 %id)
DN994617 brain, whole brain .e 65 to 782 7 to 723       717/723
(99 %)
6 diff
(99.2 %id)
F07095 brain, total brain .e 66 to 376 1 to 311       311/311
(100 %)
0 diff
(100 %id)
DA686571   .e 66 to 595 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
DA714316   .e 66 to 615 2 to 551   capped   550/551
(99 %)
1 diff
(99.9 %id)
DB040768 testis .e 66 to 621 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA130447 alzheimer cortex .e 67 to 621 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
R14455 whole brain .e 67 to 256 1 to 190       190/298
(63 %)
0 diff
(100 %id)
DB254503 uterus .e 67 to 589 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
BQ687067 ductal carcinoma, cell line, Pancreas .e 68 to 865 1 to 807       807/833
(96 %)
12 diff
(98.6 %id)
BM544732 brain, hippocampus .e 69 to 682 1 to 617       617/1221
(50 %)
7 diff
(99.5 %id)
CX758701 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 70 to 711 1 to 638     Submitted on the opposite strand 638/817
(78 %)
13 diff
(98.5 %id)
T08124   .e 71 to 473 1 to 404       404/406
(99 %)
2 diff
(99.6 %id)
BI752123 brain .e 71 to 902 1 to 835       835/835
(100 %)
6 diff
(99.3 %id)
TI_57232494   .e 71 to 734 34 to 696       663/696
(95 %)
7 diff
(99.0 %id)
BM763440 myeloma .e 71 to 646 1 to 576       576/576
(100 %)
5 diff
(99.2 %id)
BI907329 leukocyte .e 72 to 734 1 to 663       663/663
(100 %)
1 diff
(99.9 %id)
DA707449   .e 72 to 650 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA256774 caudate nucleus .e 73 to 638 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB193940 ovary, tumor tissue .e 73 to 621 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA368946 subthalamic nucleus .e 75 to 632 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
R69813 placenta .e 76 to 387 1 to 313       313/485
(64 %)
3 diff
(99.4 %id)
DA271987 caudate nucleus .e 77 to 703 2 to 628   capped   627/627
(100 %)
0 diff
(100 %id)
DB119966 thymus .e 77 to 702 2 to 627   capped   626/626
(100 %)
0 diff
(100 %id)
CD389821 embryonic trophoblasts, made from WA01 stemcells .e 80 to 835 27 to 784       758/916
(82 %)
15 diff
(98.4 %id)
CN393819 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 80 to 404 1 to 325       325/325
(100 %)
0 diff
(100 %id)
DB454788 testis .e 80 to 560 1 to 481       481/481
(100 %)
0 diff
(100 %id)
T35905 blood, white blood cells .e 80 to 348 1 to 269       269/269
(100 %)
0 diff
(100 %id)
AA312252   .e 81 to 524 1 to 445       445/445
(100 %)
1 diff
(99.8 %id)
DA041302 bladder .e 81 to 632 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA141132 alzheimer cortex .e 81 to 632 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA361549 subthalamic nucleus .e 81 to 636 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA420728 cervix .e 81 to 609 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
BM925726 brain .e 81 to 869 1 to 794       794/1127
(70 %)
19 diff
(98.4 %id)
CB154507 brain .e 82 to 652 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DA075537 cerebellum .e 83 to 630 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA081610 cerebellum .e 83 to 589 2 to 508   capped   507/507
(100 %)
0 diff
(100 %id)
DA089663 cerebellum .e 83 to 632 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA257962 caudate nucleus .e 83 to 644 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA430463 colon .e 83 to 653 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA529893 brain .e 83 to 686 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
BG419083 Kidney, renal cell adenocarcinoma .e 83 to 837 1 to 744       744/931
(79 %)
20 diff
(97.9 %id)
DA681211 ovary .e 83 to 646 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA694162   .e 83 to 655 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA744849   .e 83 to 589 2 to 508   capped   507/507
(100 %)
2 diff
(99.7 %id)
DA896862 skeletal muscle .e 83 to 626 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA913171   .e 83 to 645 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA964398 stomach .e 83 to 650 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB115878 thymus .e 83 to 635 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB124764 thymus .e 83 to 623 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DB246299 uterus, tumor tissue .e 83 to 659 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA072507 cerebellum .e 89 to 655 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA074195 cerebellum .e 89 to 638 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA966230 stomach .e 89 to 647 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BG332637 large cell carcinoma, lung .e 90 to 763 1 to 670       670/912
(73 %)
10 diff
(99.0 %id)
BM903717 ovary (pool of 3) .e 90 to 929 14 to 859       846/1062
(79 %)
14 diff
(98.7 %id)
CA489310   .e 92 to 865 1 to 779       779/921
(84 %)
10 diff
(99.0 %id)
T32695 heart .e 93 to 389 1 to 297       297/309
(96 %)
1 diff
(99.7 %id)
BQ954034 leiomyosarcoma, uterus .e 96 to 755 71 to 731       661/1055
(62 %)
14 diff
(98.7 %id)
BE908064 epithelioid carcinoma, Pancreas .e 98 to 757 1 to 662       662/666
(99 %)
4 diff
(99.4 %id)
BG707898 brain, hypothalamus .e 98 to 763 1 to 666       666/666
(100 %)
6 diff
(99.1 %id)
BE304634 adenocarcinoma cell line, colon .e 99 to 752 1 to 658       658/751
(87 %)
14 diff
(98.2 %id)
DA511794 brain .e 102 to 658 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BU146013 dorsal root ganglia .e 103 to 757 35 to 694       660/1017
(64 %)
42 diff
(95.9 %id)
CV812229 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 107 to 865 1 to 762       762/885
(86 %)
9 diff
(99.0 %id)
CV028118 mixed .e 108 to 660 1 to 553       553/553
(100 %)
0 diff
(100 %id)
CV028488 mixed .e 108 to 716 1 to 609       609/609
(100 %)
0 diff
(100 %id)
TI_1948074885   .e 108 to 226 127 to 245       119/147
(80 %)
6 diff
(96.0 %id)
TI_1948092270   .e 108 to 865 143 to 911       769/1396
(55 %)
25 diff
(98.3 %id)
BM542897 leiomyosarcoma, uterus .e 110 to 865 1 to 755       755/1163
(64 %)
4 diff
(99.7 %id)
CB267319 adipose .e 111 to 733 1 to 623       623/623
(100 %)
0 diff
(100 %id)
CB268432 adipose .e 111 to 753 1 to 645       645/670
(96 %)
2 diff
(99.8 %id)
AA452741   .e 112 to 487 1 to 376       376/398
(94 %)
14 diff
(96.5 %id)
CD676055 eye, lens .e 113 to 724 1 to 612       612/612
(100 %)
0 diff
(100 %id)
BE730848 choriocarcinoma, placenta .e 125 to 865 1 to 730       732/867
(84 %)
17 diff
(98.1 %id)
BF035742 adenocarcinoma, ovary .e 126 to 865 1 to 748       748/838
(89 %)
27 diff
(96.8 %id)
BG337298 leiomyosarcoma cell line, uterus .e 132 to 929 2 to 798       797/987
(80 %)
5 diff
(99.5 %id)
BG340181 leiomyosarcoma cell line, uterus .e 132 to 725 2 to 593       592/593
(99 %)
2 diff
(99.7 %id)
TI_1948074514   .e 147 to 931 915 to 127       792/1343
(58 %)
12 diff
(99.2 %id)
BE543157 cervical carcinoma cell line, cervix .e 256 to 865 84 to 699       614/721
(85 %)
20 diff
(97.3 %id)
BF032906 adenocarcinoma, ovary .e 256 to 859 43 to 649       607/649
(93 %)
13 diff
(98.0 %id)
TI_1948074328   .e 257 to 931 801 to 127       678/1305
(51 %)
0 diff
(100 %id)
TI_1948074702   .e 257 to 931 802 to 127       679/1299
(52 %)
2 diff
(99.9 %id)
AW364752 denis_drash .e 272 to 862 1 to 589       589/589
(100 %)
10 diff
(98.4 %id)
CN393821 embryonic stem cells, DMSO-treated H9 cellline .e 360 to 842 1 to 483       483/483
(100 %)
0 diff
(100 %id)
DC304437 cerebellum .e 380 to 797 167 to 585       419/585
(71 %)
5 diff
(99.2 %id)
BQ881724 dorsal root ganglia .e 388 to 865 1 to 496       496/1069
(46 %)
11 diff
(99.0 %id)
TI_154103273   .e 390 to 1218 913 to 85   AAA   829/974
(85 %)
2 diff
(99.8 %id)
BF935864 nervous_tumor .e 408 to 785 378 to 1     Submitted on the opposite strand 378/378
(100 %)
0 diff
(100 %id)
CK724853 Chondrosarcoma, Left Pubic Bone .e 438 to 1218 795 to 15   AAA   781/781
(100 %)
2 diff
(99.8 %id)
T09386   .e 487 to 865 1 to 380       380/387
(98 %)
2 diff
(99.5 %id)
BM706706 eye, optic nerve .e 528 to 1211 9 to 689   tiling clone, fully sequenced,   681/689
(98 %)
9 diff
(98.7 %id)
TI_1948074886   .e 753 to 931 306 to 128       182/206
(88 %)
0 diff
(100 %id)
R40974 whole brain .e 755 to 1214 486 to 14   AAA   471/507
(92 %)
26 diff
(94.9 %id)
AA910271 Kidney .e 810 to 1218 404 to 1       404/404
(100 %)
7 diff
(98.3 %id)
BU728094 eye, optic nerve .e 834 to 1214 399 to 19   fully sequenced, AAA   381/381
(100 %)
0 diff
(100 %id)
N30559.
matches multiple genes
placenta .e 934 to 1226 293 to 2     Suspected internal deletion, this clone was ignored, also hits gene SIGLEC6 292/293
(99 %)
0 diff
(100 %id)
Z41679 brain, total brain .e 964 to 1214 251 to 1       251/251
(100 %)
0 diff
(100 %id)
AW444439   .e 1006 to 1214 224 to 16   AAA   209/215
(97 %)
2 diff
(99.1 %id)
AW450600   .e 1006 to 1214 224 to 16   AAA   209/215
(97 %)
1 diff
(99.6 %id)
AA515703 colon .e 1044 to 1216 173 to 1       173/173
(100 %)
1 diff
(99.5 %id)
DB326751 brain .e 1129 to 1663 1 to 535     Submitted on the opposite strand 535/536
(99 %)
2 diff
(99.7 %id)
AA876570 metastatic prostate bone lesion .e 1130 to 1334 1 to 203       203/209
(97 %)
13 diff
(93.8 %id)
EC514045 Prostate .e 1137 to 1245 1 to 111       111/122
(90 %)
7 diff
(94.3 %id)
DB576150 hypothalamus .e 1137 to 1510 374 to 1       374/381
(98 %)
4 diff
(99.0 %id)
DB563714 hypothalamus .e 1138 to 1608 473 to 1       473/474
(99 %)
26 diff
(94.6 %id)
DB297597 cerebellum .e 1139 to 1653 1 to 515     Submitted on the opposite strand 515/515
(100 %)
1 diff
(99.9 %id)
DB309132 hippocampus .e 1139 to 1688 1 to 551     Submitted on the opposite strand 551/551
(100 %)
3 diff
(99.5 %id)
FN098941 breast carcinoma .e 1139 to 1251 1 to 115       115/124
(92 %)
6 diff
(95.2 %id)
BP397815 pancreatic islet .e 1139 to 1638 501 to 1       501/501
(100 %)
2 diff
(99.7 %id)
DB531885 hippocampus .e 1139 to 1572 432 to 1       432/432
(100 %)
4 diff
(99.1 %id)
DB544386 hippocampus .e 1139 to 1634 496 to 1       496/496
(100 %)
0 diff
(100 %id)
DB550343 hippocampus .e 1139 to 1608 470 to 1       470/470
(100 %)
3 diff
(99.4 %id)
DB339476 testis .e 1139 to 1678 1 to 540     Submitted on the opposite strand 540/540
(100 %)
2 diff
(99.7 %id)
DB526565 testis .e 1141 to 1591 451 to 1       451/453
(99 %)
0 diff
(100 %id)
DB555468 hypothalamus .e 1143 to 1607 465 to 1       465/465
(100 %)
2 diff
(99.6 %id)
AI751405 Bone, Hip .e 1145 to 1581 6 to 442       437/442
(98 %)
6 diff
(98.7 %id)
BE245484 leukopheresis .e 1149 to 1468 1 to 320       320/320
(100 %)
0 diff
(100 %id)
AA338936 brain .e 1154 to 1348 1 to 195       195/195
(100 %)
0 diff
(100 %id)
CD633922   .e 1156 to 1806 9 to 659   tiling clone,   651/659
(98 %)
6 diff
(99.1 %id)
DB512085 testis .e 1159 to 1570 415 to 1       415/415
(100 %)
8 diff
(98.1 %id)
Z78324 brain .e 1188 to 1992 1 to 813       813/815
(99 %)
42 diff
(94.9 %id)
AW378545 head_neck .e 1190 to 1770 13 to 593       581/599
(96 %)
4 diff
(99.4 %id)
AW579652 head_neck .e 1190 to 1719 1 to 529       529/533
(99 %)
11 diff
(98.0 %id)
AW378626 head_neck .e 1234 to 1770 1 to 542       542/548
(98 %)
14 diff
(97.5 %id)
CD633921   .e 1243 to 1806 26 to 589       564/593
(95 %)
4 diff
(99.4 %id)
BF954739 nervous_normal .e 1250 to 1786 35 to 573       539/573
(94 %)
6 diff
(99.0 %id)
BF954742 nervous_normal .e 1255 to 1828 1 to 570       570/570
(100 %)
5 diff
(99.2 %id)
AW378630 head_neck .e 1270 to 1759 1 to 488       488/488
(100 %)
11 diff
(97.8 %id)
BF801918 colon_ins .e 1323 to 1610 14 to 301       288/301
(95 %)
6 diff
(98.1 %id)
BF830766 head_neck .e 1376 to 1640 1 to 266       266/266
(100 %)
6 diff
(97.8 %id)
BF876474 lung_tumor .e 1382 to 1820 1 to 439       439/439
(100 %)
1 diff
(99.8 %id)
AW997217 breast_normal .e 1399 to 2025 1 to 626       626/628
(99 %)
13 diff
(98.0 %id)
FN047481 breast carcinoma .e 1449 to 1530 1 to 82       82/82
(100 %)
0 diff
(100 %id)
BG954065 colon .e 1527 to 1746 16 to 235       220/235
(93 %)
6 diff
(97.5 %id)
BG987708 head_neck .e 1561 to 1857 1 to 296       296/298
(99 %)
7 diff
(97.7 %id)
BF858836 prostate_tumor .e 1655 to 1945 1 to 292       292/297
(98 %)
7 diff
(97.7 %id)
BF848768 lung_normal .e 1659 to 2013 9 to 359       351/359
(97 %)
8 diff
(97.8 %id)
BI052398 placenta_normal .e 1665 to 2013 12 to 359       348/359
(96 %)
6 diff
(98.4 %id)
BI052416 placenta_normal .e 1672 to 2013 1 to 342   tiling clone,   342/342
(100 %)
0 diff
(100 %id)
BF943828 nervous_normal .e 1688 to 2151 1 to 464       464/471
(98 %)
21 diff
(95.6 %id)
BI012626 lung_normal .e 1696 to 1830 3 to 139       137/143
(95 %)
10 diff
(93.1 %id)
BF923441 nervous_tumor .e 1751 to 2181 1 to 434       434/434
(100 %)
17 diff
(96.1 %id)
BI062916 uterus_tumor .e 1753 to 2326 1 to 574       574/574
(100 %)
11 diff
(98.1 %id)
BI063129 uterus_tumor .e 1753 to 2218 1 to 465       465/465
(100 %)
5 diff
(99.0 %id)
BI061626 uterus_tumor .e 1756 to 2327 1 to 572       572/572
(100 %)
3 diff
(99.5 %id)
BQ379922 uterus_tumor .e 1759 to 2240 15 to 496       482/496
(97 %)
6 diff
(98.8 %id)
BI062878 uterus_tumor .e 1760 to 2225 11 to 477       467/477
(97 %)
6 diff
(98.8 %id)
BI061412 uterus_tumor .e 1766 to 2328 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BI061624 uterus_tumor .e 1766 to 2254 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
BI061628 uterus_tumor .e 1766 to 2330 1 to 565   tiling clone,   565/565
(100 %)
1 diff
(99.9 %id)
BI062839 uterus_tumor .e 1766 to 2340 1 to 574       574/574
(100 %)
7 diff
(98.8 %id)
BI062843 uterus_tumor .e 1766 to 2202 1 to 437       437/437
(100 %)
0 diff
(100 %id)
BI062844 uterus_tumor .e 1766 to 2227 1 to 461       461/461
(100 %)
4 diff
(99.2 %id)
BI062849 uterus_tumor .e 1766 to 2200 1 to 436       436/436
(100 %)
3 diff
(99.4 %id)
BI062853 uterus_tumor .e 1766 to 2178 1 to 413       413/413
(100 %)
3 diff
(99.3 %id)
BI062910 uterus_tumor .e 1766 to 2305 1 to 540       540/540
(100 %)
1 diff
(99.9 %id)
BI062914 uterus_tumor .e 1766 to 2328 1 to 564       564/564
(100 %)
4 diff
(99.3 %id)
BI062917 uterus_tumor .e 1766 to 2323 1 to 558       558/558
(100 %)
3 diff
(99.5 %id)
BI062928 uterus_tumor .e 1766 to 2323 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
BI062971 uterus_tumor .e 1766 to 2294 1 to 530       530/530
(100 %)
3 diff
(99.5 %id)
BI063130 uterus_tumor .e 1766 to 2316 1 to 551       551/551
(100 %)
15 diff
(97.3 %id)
BI063131 uterus_tumor .e 1766 to 2092 1 to 327       327/327
(100 %)
18 diff
(94.5 %id)
BI063134 uterus_tumor .e 1766 to 2315 1 to 549       549/549
(100 %)
5 diff
(99.1 %id)
BI063137 uterus_tumor .e 1766 to 2317 1 to 550       550/550
(100 %)
4 diff
(99.3 %id)
BI063141 uterus_tumor .e 1766 to 2336 1 to 571       571/571
(100 %)
5 diff
(99.2 %id)
BI063343 uterus_tumor .e 1766 to 2268 1 to 503       503/503
(100 %)
16 diff
(96.9 %id)
BI063900 uterus_tumor .e 1766 to 2213 1 to 448       448/448
(100 %)
5 diff
(98.9 %id)
BQ379921 uterus_tumor .e 1766 to 2218 1 to 453       453/453
(100 %)
6 diff
(98.7 %id)
BI062845 uterus_tumor .e 1767 to 2193 1 to 427       427/427
(100 %)
7 diff
(98.4 %id)
BI062907 uterus_tumor .e 1785 to 2207 1 to 422       422/422
(100 %)
9 diff
(97.9 %id)
CD633925   .e 1819 to 2291 293 to 762       470/470
(100 %)
2 diff
(99.6 %id)
BI061406 uterus_tumor .e 1820 to 2213 1 to 394       394/394
(100 %)
4 diff
(99.0 %id)
AW802164 uterus .e 1853 to 2193 11 to 351       341/351
(97 %)
5 diff
(98.6 %id)
AW273718 pooled .e 1878 to 2342 463 to 1       463/463
(100 %)
3 diff
(99.4 %id)
FN132166 breast carcinoma .e 1949 to 2064 1 to 114       114/114
(100 %)
2 diff
(98.3 %id)
BG954245 colon .e 2016 to 2230 1 to 222       222/222
(100 %)
15 diff
(93.3 %id)
BG978893 colon_normal .e 2025 to 2301 1 to 280       280/280
(100 %)
21 diff
(92.5 %id)
AA918300 pooled .e 2205 to 2356 152 to 1   tiling clone,   152/152
(100 %)
0 diff
(100 %id)
BQ221960 melanotic melanoma, skin .f 1 to 698 24 to 726   tiling clone,   703/870
(80 %)
13 diff
(98.6 %id)
BE892697 melanotic melanoma, skin .f 25 to 674 1 to 647       647/865
(74 %)
12 diff
(98.7 %id)
N57212.
matches multiple genes
placenta .f 59 to 376 1 to 319     also hits gene SIGLEC6 319/380
(83 %)
8 diff
(97.9 %id)
BF942878 nervous_normal .f 64 to 519 103 to 558       456/561
(81 %)
7 diff
(98.8 %id)
BQ063425 lymph, lymphoma, cell line .f 66 to 663 66 to 670       605/1239
(48 %)
22 diff
(98.3 %id)
CN393820 embryonic stem cells, cell lines H1, H7, andH9 .f 73 to 598 1 to 526       526/526
(100 %)
0 diff
(100 %id)
CN393818 embryonic stem cells, DMSO-treated H9 cellline .f 128 to 298 1 to 171       171/198
(86 %)
2 diff
(99.0 %id)
BE465034 carcinoid, lung .f 640 to 1188 555 to 8   tiling clone,   548/555
(98 %)
0 diff
(100 %id)
AI017337   .f 671 to 1168 501 to 4   tiling clone,   498/501
(99 %)
0 diff
(100 %id)
AA682474 liver and spleen .f 733 to 1196 464 to 1   tiling clone,   464/464
(100 %)
3 diff
(99.4 %id)
AI928405 Kidney .f 787 to 1196 421 to 12   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 410/410
(100 %)
3 diff
(99.3 %id)
AI935695 Kidney .f 787 to 1196 410 to 1       410/410
(100 %)
3 diff
(99.3 %id)
BQ061552 lymph, lymphoma, cell line .g 1 to 1020 1 to 1041 D260G L261S M262D H263A D264R ... tiling clone,   1041/1046
(99 %)
28 diff
(97.4 %id)
TI_154050320   .g 300 to 1086 874 to 92   AAA   785/1004
(78 %)
6 diff
(99.5 %id)
CA413927 Chondrosarcoma Grade II, Left Pelvis .g 390 to 1086 712 to 19   tiling clone, AAA   694/694
(100 %)
3 diff
(99.6 %id)
W26853 eye, retina .g 516 to 1028 519 to 2       518/572
(90 %)
13 diff
(97.8 %id)
AI948689 Kidney .g 624 to 1086 463 to 1       463/463
(100 %)
0 diff
(100 %id)
BM792943 Ascites, stomach .g 626 to 1085 1 to 461       461/461
(100 %)
10 diff
(97.9 %id)
BM795017 Ascites, stomach .g 626 to 1085 1 to 460       460/460
(100 %)
1 diff
(99.8 %id)
NM_001003676.1   .h 1 to 1982 1 to 1982 exact RefSeq, AAA   1982/1982
(100 %)
0 diff
(100 %id)
BC009455 Lung, small cell carcinoma .h 69 to 1982 1 to 1914 exact tiling clone, available from MGC, AAA   1914/1914
(100 %)
1 diff
(100.0 %id)
AL136575 amygdala .h 71 to 1982 1 to 1912 exact available from DKFZ, AAA   1912/1912
(100 %)
1 diff
(100.0 %id)
BC052291 Blood, natural killer cell .h 77 to 1982 1 to 1906 exact tiling clone, available from MGC, AAA   1906/1906
(100 %)
0 diff
(100 %id)
BQ054103 blood, natural killer cells, cell line .h 79 to 966 1 to 893 A241P I248N N249Q Q250P A251S ...     893/1051
(84 %)
13 diff
(98.8 %id)
TI_57151468   .h 108 to 966 33 to 888       858/889
(96 %)
32 diff
(96.5 %id)
BI762173 pooled colon, kidney, stomach .h 152 to 966 46 to 856       813/857
(94 %)
31 diff
(96.4 %id)
CR598117 fetal brain .h 255 to 1935 1 to 1681       1681/1681
(100 %)
0 diff
(100 %id)
AL520568 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .h 255 to 1045 1 to 791       791/791
(100 %)
0 diff
(100 %id)
AL538803 brain, fetal brain .h 255 to 999 1 to 745   fully sequenced,   745/745
(100 %)
8 diff
(99.0 %id)
AL544665 placenta, Placenta Cot 25-normalized .h 255 to 1053 1 to 799   fully sequenced,   799/799
(100 %)
0 diff
(100 %id)
BG678192 skin, squamous cell carcinoma .h 303 to 1178 1 to 877       877/882
(99 %)
7 diff
(99.3 %id)
AW957170   .h 517 to 1194 1 to 678       678/679
(99 %)
11 diff
(98.4 %id)
BU839126 melanotic melanoma, cell line, skin .h 596 to 1348 1 to 756       756/868
(87 %)
12 diff
(98.7 %id)
AL567509 brain, fetal brain .h 969 to 1935 963 to 1   fully sequenced,   963/963
(100 %)
21 diff
(97.9 %id)
AW248091 lung, small cell carcinoma .h 984 to 1519 2 to 537   fully sequenced,   536/537
(99 %)
5 diff
(99.1 %id)
AW249083 lung, small cell carcinoma .h 984 to 1508 2 to 526   fully sequenced,   525/526
(99 %)
5 diff
(99.1 %id)
AL570714 placenta, Placenta Cot 25-normalized .h 1023 to 1953 924 to 1   fully sequenced,   924/924
(100 %)
32 diff
(96.6 %id)
AL520567 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .h 1058 to 1954 894 to 1       894/894
(100 %)
22 diff
(97.6 %id)
AA299760 uterus .h 1102 to 1370 1 to 269       269/269
(100 %)
0 diff
(100 %id)
AW954157   .h 1102 to 1810 1 to 710       710/712
(99 %)
16 diff
(97.8 %id)
AA593482 gastric tumor, stomach .h 1107 to 1521 11 to 426     Submitted on the opposite strand 416/426
(97 %)
6 diff
(98.6 %id)
AW248648 lung, small cell carcinoma .h 1478 to 1982 516 to 11   fully sequenced, AAA   506/506
(100 %)
2 diff
(99.7 %id)
AW249750 lung, small cell carcinoma .h 1489 to 1982 504 to 11   fully sequenced, AAA   494/494
(100 %)
1 diff
(99.8 %id)
AK316318   .i 1 to 1623 1 to 1623 exact tiling clone,   1623/1623
(100 %)
4 diff
(99.8 %id)
DA911211   .i 2 to 552 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
BQ425413 melanotic melanoma, skin .j-u 1 to 837 1 to 842   tiling clone,   842/851
(98 %)
11 diff
(98.8 %id)
BQ439975 melanotic melanoma, skin .j-u 13 to 863 1 to 855       855/856
(99 %)
7 diff
(99.2 %id)
BU193831 melanotic melanoma, skin .j-u 648 to 1442 1 to 807 R197K T215N H216P L217P C218F ... tiling clone,   807/867
(93 %)
14 diff
(98.4 %id)
CB154739 brain .k 1 to 542 1 to 542   tiling clone,   542/542
(100 %)
0 diff
(100 %id)
BF346266 anaplastic oligodendroglioma with 1p/19qloss, brain .k 41 to 824 1 to 768   tiling clone,   768/979
(78 %)
27 diff
(97.3 %id)
BU944619 adenocarcinoma, cell line, breast .k 41 to 911 1 to 874   tiling clone,   874/917
(95 %)
12 diff
(98.7 %id)
DC314073 amygdala .l 1 to 545 1 to 546   tiling clone,   546/564
(96 %)
7 diff
(98.8 %id)
CN393823 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .l 211 to 781 65 to 635       571/635
(89 %)
6 diff
(99.1 %id)
BM923501 pooled colon, kidney, stomach .l 381 to 1062 1 to 688   tiling clone,   688/1286
(53 %)
10 diff
(99.3 %id)
BG911048 anaplastic oligodendroglioma with 1p/19qloss, brain .l 542 to 1321 1 to 787 P140Q A141Q M142W D143M E144K ... tiling clone,   787/886
(88 %)
23 diff
(97.5 %id)
BG774746 choriocarcinoma, placenta .l 617 to 1432 1 to 808   tiling clone,   808/808
(100 %)
16 diff
(98.1 %id)
DC310246 cerebellum .m 1 to 511 1 to 512   tiling clone,   512/530
(96 %)
6 diff
(98.9 %id)
CD172340 White Matter .m 312 to 1112 1 to 803 exact tiling clone,   803/844
(95 %)
4 diff
(99.6 %id)
CF131070 Chondrosarcoma Lung Metastasis cell lines, lung .m 354 to 1067 1 to 714 R159M     714/714
(100 %)
4 diff
(99.5 %id)
TI_154194511   .m 354 to 1244 48 to 929 R159M     882/1037
(85 %)
30 diff
(97.2 %id)
BQ644170 hepatocellular carcinoma, cell line, Liver .m 531 to 1280 1 to 753       753/840
(89 %)
11 diff
(98.7 %id)
BQ650250 hepatocellular carcinoma, cell line, Liver .m 531 to 1282 1 to 752   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 752/752
(100 %)
1 diff
(99.9 %id)
BQ649277 hepatocellular carcinoma, cell line, Liver .m 531 to 1280 1 to 750   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 750/752
(99 %)
6 diff
(99.3 %id)
BQ651304 hepatocellular carcinoma, cell line, Liver .m 531 to 1283 1 to 753       753/764
(98 %)
4 diff
(99.5 %id)
BQ649371 hepatocellular carcinoma, cell line, Liver .m 531 to 1285 1 to 760       760/950
(80 %)
27 diff
(97.2 %id)
BQ652925 hepatocellular carcinoma, cell line, Liver .m 531 to 1110 1 to 588       588/786
(74 %)
18 diff
(97.8 %id)
AA826844 epithelium (cell line), Prostate .m 955 to 1283 333 to 9   tiling clone,   325/333
(97 %)
0 diff
(100 %id)
DA967107 stomach .n 1 to 525 2 to 527 D51N R157P Q158S P159A L160S ... tiling clone, capped   526/526
(100 %)
2 diff
(99.7 %id)
BG570354 lung .o 1 to 720 1 to 722 L104W tiling clone,   722/722
(100 %)
8 diff
(98.9 %id)
AA256741 germinal center B cell .o 41 to 553 1 to 511 P4R E5S R6A L7Y A8P ... tiling clone,   511/511
(100 %)
8 diff
(98.5 %id)
AW204528   .o 252 to 587 352 to 18   AAA   335/335
(100 %)
20 diff
(94.1 %id)
AI766726 2 pooled tumors (clear cell type), Kidney .o 373 to 584 217 to 2       216/217
(99 %)
0 diff
(100 %id)
BG401509 Kidney .p 1 to 680 9 to 678 G57E T58H H59T I60F L61S ... tiling clone,   678/870
(77 %)
19 diff
(97.9 %id)
DC387792 small intestine .q 1 to 559 2 to 560   tiling clone,   560/560
(100 %)
0 diff
(100 %id)
BF211436 bone marrow, from chronic myelogenous leukemia .q 280 to 754 105 to 574   tiling clone,   470/815
(57 %)
16 diff
(98.1 %id)
DA507552 brain .r 1 to 565 2 to 566 exact tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
AI378863 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .s 1 to 477 477 to 1 exact tiling clone,   477/477
(100 %)
1 diff
(99.8 %id)
AA378888 synovial membrane .t-u 1 to 340 2 to 341       341/341
(100 %)
0 diff
(100 %id)
AW958343   .t-u 1 to 617 1 to 618 exact tiling clone,   618/618
(100 %)
13 diff
(97.9 %id)
DA487960 brain .u 1 to 558 2 to 559 exact tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
DB083818 testis .va 1 to 382 165 to 546 exact tiling clone, capped   382/545
(70 %)
6 diff
(98.9 %id)
CA454368   .vb 1 to 309 1 to 309 exact tiling clone,   610/805
(75 %)
18 diff
(97.8 %id)
DA796142 brain .vc 1 to 551 2 to 551 exact tiling clone, capped   550/550
(100 %)
2 diff
(99.7 %id)
DW451910 Liver .vd 1 to 356 18 to 373 exact tiling clone,   356/373
(95 %)
7 diff
(98.2 %id)
BG432485 Kidney .vd 27 to 726 1 to 700   tiling clone,   700/771
(90 %)
8 diff
(99.0 %id)
BF131997 hypernephroma, Kidney .ve 1 to 638 1 to 637 M29T R79* tiling clone,   637/645
(98 %)
21 diff
(96.8 %id)
W27624 eye, retina .ve 498 to 1065 22 to 593   tiling clone,   572/629
(90 %)
32 diff
(95.0 %id)
DW422334 Liver .ve 963 to 1240 17 to 295   tiling clone,   279/295
(94 %)
17 diff
(94.3 %id)
BM716175 eye, RPE and Choroid .vf-u 1 to 552 1 to 555 exact tiling clone,   555/555
(100 %)
3 diff
(99.5 %id)
TI_151745127   .vf-u 246 to 1004 848 to 92   tiling clone, AAA   757/1004
(75 %)
39 diff
(96.2 %id)
DA374145 thalamus .vg 1 to 596 2 to 597 Q32R tiling clone, capped   596/596
(100 %)
4 diff
(99.4 %id)
DA713204   .vh 1 to 555 2 to 556 exact tiling clone, capped   555/555
(100 %)
1 diff
(99.9 %id)
H56528 pineal gland .vi-u 1 to 370 1 to 372 A14G E15* tiling clone,   372/401
(92 %)
7 diff
(98.3 %id)
AK124296 ovary, tumor tissue Gene C11orf49, variant not shown       available from FLJ,      
BF858660 prostate_tumor Gene C11orf49, variant not shown         This clone was ignored    
BI062913 uterus_tumor Gene C11orf49, variant not shown         This clone was ignored    
DC302692 cerebellum Gene C11orf49, variant not shown         This clone was ignored    
DA368056 subthalamic nucleus Gene C11orf49, variant not shown       capped Suspected internal deletion, this clone was ignored    
CN280996 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene C11orf49, variant not shown              
CR600987 Placenta Cot 25-normalized Gene C11orf49, variant not shown         This clone was ignored    
AA215537 germinal center B cell Gene C11orf49, variant not shown              
BE047983 brain, tumor, 5 pooled (see description) Gene C11orf49, variant not shown              
BG385939 adenocarcinoma cell line, colon Gene C11orf49, variant not shown         This clone was ignored    
BP331531 rectum Gene C11orf49, variant not shown         Suspected internal deletion, this clone was ignored    
DB112015 thymus Gene C11orf49, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB122057 thymus Gene C11orf49, variant not shown       capped This clone was ignored    
DB344035 thymus Gene C11orf49, variant not shown         This clone was ignored    
DB194070 ovary, tumor tissue Gene C11orf49, variant not shown       capped      
DB347785 ovary, tumor tissue Gene C11orf49, variant not shown              
DB286239 uterus Gene C11orf49, variant not shown       capped      
DB352793 uterus Gene C11orf49, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va, .vb, .vc, .vd, .ve, .vf-u, .vg, .vh, .vi-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI