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Gene WDR83TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
142 supporting clones for gene WDR83 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CB143206 Liver .a 1 to 538 2 to 539       539/539
(100 %)
0 diff
(100 %id)
NM_032332.3   .a 1 to 1194 2 to 1195 exact RefSeq, AAA   1195/1195
(100 %)
0 diff
(100 %id)
DA832575 placenta .a 1 to 599 2 to 601   tiling clone, capped   600/610
(98 %)
5 diff
(99.2 %id)
CB128407 Liver .a 9 to 539 1 to 531       531/531
(100 %)
1 diff
(99.9 %id)
BQ056907 lymph, lymphoma, cell line .a 15 to 883 1 to 880   tiling clone,   880/965
(91 %)
13 diff
(98.7 %id)
BP308929 brain .a 17 to 601 1 to 586       586/586
(100 %)
8 diff
(98.7 %id)
BI117200 lung, small cell carcinoma .a 35 to 832 1 to 806       806/811
(99 %)
24 diff
(97.1 %id)
DB378830 placenta .a 714 to 1194 482 to 1   tiling clone,   482/485
(99 %)
12 diff
(97.6 %id)
Z46189 brain, total brain .b 1 to 305 1 to 305   tiling clone,   305/305
(100 %)
10 diff
(96.8 %id)
BI597381 brain, hypothalamus .b 17 to 780 1 to 766       766/769
(99 %)
6 diff
(99.3 %id)
TI_45216155   .b 20 to 780 127 to 889       763/892
(85 %)
9 diff
(99.0 %id)
NM_001099737.2   .b 20 to 1471 1 to 1452 exact RefSeq, AAA   1452/1452
(100 %)
0 diff
(100 %id)
CB988347 Human Placenta, placenta .b 23 to 703 28 to 711       684/753
(90 %)
14 diff
(98.2 %id)
BP382135 adipose tissue .b 30 to 654 1 to 625       625/625
(100 %)
1 diff
(99.9 %id)
BP307685 brain .b 42 to 645 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
BP309356 brain .b 42 to 623 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AK314164   .b 43 to 1312 1 to 1270 exact tiling clone,   1270/1270
(100 %)
1 diff
(100.0 %id)
DA914556   .b 44 to 609 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BF686756 leiomyosarcoma cell line, uterus .b 56 to 860 1 to 804       768/1092
(70 %)
40 diff
(96.4 %id)
CR998599 T-Lymphocytes .b 64 to 844 1 to 782       782/782
(100 %)
1 diff
(99.9 %id)
BE396159 endometrium, adenocarcinoma cell line, uterus .b 65 to 690 56 to 681       626/731
(85 %)
10 diff
(98.7 %id)
BE392693 endometrium, adenocarcinoma cell line, uterus .b 83 to 712 1 to 625       625/651
(96 %)
13 diff
(98.1 %id)
BG325972 Kidney, renal cell adenocarcinoma .b 295 to 1118 1 to 817       817/1087
(75 %)
23 diff
(97.9 %id)
AK223195 renal proximal tubule .b 327 to 1466 1 to 1140 S162L G278D AAA   1140/1140
(100 %)
2 diff
(99.9 %id)
BP331874 renal proximal tubule .b 327 to 907 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BU602208 mixed (pool of 40 RNAs) .b 329 to 1049 1 to 727       727/798
(91 %)
18 diff
(97.8 %id)
CX786375 human embryonic stem cells .b 330 to 1023 1 to 694       694/694
(100 %)
0 diff
(100 %id)
BX281835 breast, mammary adenocarcinoma, cell line .b 336 to 817 1 to 482       482/482
(100 %)
2 diff
(99.6 %id)
BI857453 breast, mammary adenocarcinoma, cell line .b 339 to 1076 1 to 737       739/737
(100 %)
4 diff
(99.5 %id)
BI857371 breast, mammary adenocarcinoma, cell line .b 339 to 1184 1 to 853       853/892
(95 %)
24 diff
(97.4 %id)
TI_57187415   .b 339 to 1076 57 to 793       739/737
(100 %)
4 diff
(99.5 %id)
TI_57187503   .b 339 to 1184 54 to 906       853/892
(95 %)
24 diff
(97.4 %id)
BU194925 melanotic melanoma, skin .b 340 to 1172 5 to 841       837/876
(95 %)
21 diff
(97.7 %id)
AW410687 muscle, rhabdomyosarcoma .b 343 to 815 19 to 491       473/491
(96 %)
6 diff
(98.8 %id)
BC005870 Muscle, rhabdomyosarcoma .b 344 to 1471 1 to 1128 exact tiling clone, available from MGC, AAA   1128/1128
(100 %)
0 diff
(100 %id)
CN261759 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 347 to 776 1 to 430       430/430
(100 %)
0 diff
(100 %id)
BU195425 melanotic melanoma, skin .b 347 to 1163 1 to 820       820/836
(98 %)
5 diff
(99.5 %id)
BM714210 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 347 to 958 1 to 612   fully sequenced,   612/612
(100 %)
1 diff
(99.9 %id)
BF981501 duodenal adenocarcinoma, cell line, small intestine .b 348 to 1091 1 to 742       742/1064
(69 %)
2 diff
(99.9 %id)
BQ951078 large cell carcinoma, lung .b 348 to 1161 1 to 820       820/954
(85 %)
14 diff
(98.6 %id)
TI_1948104281   .b 363 to 1314 130 to 1076 A2V E236N Y237T K238S L239W ...     947/1326
(71 %)
31 diff
(97.7 %id)
TI_1948104576   .b 363 to 1311 124 to 1066       943/1326
(71 %)
28 diff
(97.9 %id)
TI_1948104577   .b 363 to 1311 1078 to 130       948/1297
(73 %)
20 diff
(98.5 %id)
TI_1948104877   .b 363 to 1311 128 to 1077       948/1339
(70 %)
28 diff
(98.0 %id)
TI_1948104879   .b 363 to 1311 1077 to 131       947/1380
(68 %)
12 diff
(99.2 %id)
TI_1948105184   .b 363 to 1311 125 to 1075       951/1344
(70 %)
27 diff
(98.0 %id)
TI_1948105186   .b 363 to 1311 1074 to 131       944/1347
(70 %)
11 diff
(99.2 %id)
CV026707 mixed .b 365 to 1049 1 to 684       684/713
(95 %)
2 diff
(99.8 %id)
TI_1948104283   .b 366 to 1311 1074 to 131       944/1342
(70 %)
17 diff
(98.8 %id)
BU598195 mixed (pool of 40 RNAs) .b 438 to 1216 1 to 788       786/793
(99 %)
18 diff
(97.8 %id)
BU598224 mixed (pool of 40 RNAs) .b 438 to 936 1 to 503       503/731
(68 %)
4 diff
(99.5 %id)
BQ636846 eye, retina .b 448 to 989 1 to 542       542/542
(100 %)
0 diff
(100 %id)
BE299066 muscle, rhabdomyosarcoma .b 450 to 1145 1 to 700       698/750
(93 %)
18 diff
(97.6 %id)
TI_1948104878   .b 468 to 1311 968 to 126       843/1311
(64 %)
6 diff
(99.6 %id)
TI_1948105185   .b 469 to 1311 972 to 124       849/1325
(64 %)
17 diff
(98.8 %id)
TI_1948104282   .b 473 to 1311 969 to 126       844/1300
(64 %)
14 diff
(99.0 %id)
DB486778.
matches multiple genes
hypothalamus .b 503 to 920 1 to 419     also hits gene DHPS 419/419
(100 %)
6 diff
(98.6 %id)
DB489449 hypothalamus .b 503 to 885 1 to 377       377/464
(81 %)
54 diff
(88.4 %id)
BM676586 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 908 to 1471 581 to 19   fully sequenced, AAA   563/563
(100 %)
1 diff
(99.9 %id)
AW410688 muscle, rhabdomyosarcoma .b 939 to 1471 557 to 25   AAA   533/533
(100 %)
1 diff
(99.9 %id)
Z41813 brain, total brain .b 1161 to 1466 306 to 1       306/306
(100 %)
0 diff
(100 %id)
H05573 whole brain .c 1 to 552 1 to 560   tiling clone,   560/561
(99 %)
30 diff
(94.7 %id)
BI597389 brain, hypothalamus .c 6 to 366 1 to 362   tiling clone,   362/362
(100 %)
4 diff
(98.9 %id)
TI_45216163   .c 9 to 366 121 to 479       359/479
(74 %)
6 diff
(98.8 %id)
CR602746 Neuroblastoma Cot 25-normalized .c 58 to 1486 1 to 1429 exact tiling clone,   1429/1429
(100 %)
0 diff
(100 %id)
AL528071 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 58 to 601 1 to 544       544/544
(100 %)
0 diff
(100 %id)
BX328984 Neuroblastoma Cot 25-normalized .c 197 to 1068 869 to 1       869/936
(92 %)
3 diff
(99.7 %id)
BP216238 corpus callosum .c 316 to 898 1 to 583       583/583
(100 %)
0 diff
(100 %id)
AI638509 pooled germ cell tumors .c 1216 to 1526 332 to 22   AAA   311/320
(97 %)
7 diff
(97.9 %id)
AW440726 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .c 1216 to 1526 313 to 1       313/315
(99 %)
5 diff
(98.5 %id)
AW361625 colon .c 1230 to 1523 1 to 286       286/302
(94 %)
18 diff
(94.1 %id)
AW361630 colon .c 1236 to 1523 18 to 301       284/317
(89 %)
10 diff
(96.9 %id)
AI000779 pooled germ cell tumors .c 1252 to 1527 276 to 2       275/276
(99 %)
0 diff
(100 %id)
H05107 whole brain .c 1257 to 1521 277 to 11   AAA   267/267
(100 %)
4 diff
(98.6 %id)
AW361480 colon .c 1271 to 1394 2 to 123       122/123
(99 %)
7 diff
(94.4 %id)
AI864001 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .c 1310 to 1527 226 to 9   tiling clone,   218/226
(96 %)
0 diff
(100 %id)
DR979445 placenta .c 1412 to 1553 140 to 1   tiling clone,   140/149
(93 %)
4 diff
(97.4 %id)
BE732118 choriocarcinoma, placenta .d 1 to 632 1 to 633 F19L N20K E21* tiling clone,   633/633
(100 %)
4 diff
(99.4 %id)
BG288948 bladder, transitional cell papilloma, cell line .e 1 to 757 1 to 764 H156Q tiling clone,   764/780
(97 %)
18 diff
(97.7 %id)
BM726317 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 176 to 445 1 to 270   fully sequenced,   270/270
(100 %)
0 diff
(100 %id)
BM716538 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 182 to 791 1 to 610   AAA   610/610
(100 %)
1 diff
(99.9 %id)
BM713075 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 183 to 710 1 to 528       528/528
(100 %)
2 diff
(99.7 %id)
BM680924 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 415 to 796 400 to 19   tiling clone, fully sequenced, AAA   382/382
(100 %)
0 diff
(100 %id)
BQ881554 brain, neuroblastoma, cell line .f 1 to 783 1 to 799   tiling clone,   797/961
(82 %)
22 diff
(97.8 %id)
BQ325139 colon_ins .f 136 to 414 67 to 345       279/346
(80 %)
6 diff
(98.3 %id)
R24308 whole brain .f 213 to 679 1 to 473   tiling clone,   473/478
(98 %)
11 diff
(97.7 %id)
R44905 whole brain .f 942 to 1232 306 to 12   tiling clone, AAA   295/295
(100 %)
8 diff
(97.3 %id)
CT002583 T-Lymphocytes .g 1 to 770 1 to 773 exact tiling clone,   773/773
(100 %)
3 diff
(99.7 %id)
CN261760 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h 1 to 644 1 to 644 exact tiling clone,   644/644
(100 %)
1 diff
(99.9 %id)
CD518475 White Matter .i 1 to 865 1 to 874 T41H G42R E43G L44A L45A ... tiling clone,   874/979
(89 %)
22 diff
(97.8 %id)
CB127193 cervix, Uterine .j 1 to 595 1 to 595 exact tiling clone,   595/595
(100 %)
0 diff
(100 %id)
NR_029375.1   .k 1 to 1435 1 to 1435   RefSeq, tiling clone, AAA   1435/1435
(100 %)
0 diff
(100 %id)
DB501695 hypothalamus .k 6 to 477 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
AK074525 whole embryo, mainly head .k 11 to 1435 1 to 1425   available from FLJ,   1425/1425
(100 %)
0 diff
(100 %id)
DA569117 whole embryo, mainly head .k 12 to 752 2 to 743   capped   742/742
(100 %)
3 diff
(99.6 %id)
BQ720537 sympathetic trunk .k 68 to 835 1 to 772   AAA   772/934
(82 %)
12 diff
(98.8 %id)
BE887549 leiomyosarcoma, uterus .k 93 to 798 1 to 704       704/704
(100 %)
3 diff
(99.6 %id)
BP426165 small intestine .k 430 to 551 1 to 122     Submitted on the opposite strand 122/122
(100 %)
0 diff
(100 %id)
AW969592   .k 612 to 1281 1 to 673 C110L Q120H R123P E124K A126G ...     673/681
(98 %)
18 diff
(97.4 %id)
TI_149285344   .k 656 to 1435 858 to 85 A114V AAA   774/791
(97 %)
15 diff
(98.2 %id)
BU633655 cell lines, Chondrosarcoma .k 678 to 1435 776 to 19   AAA   758/760
(99 %)
2 diff
(99.8 %id)
BQ941919 large cell carcinoma, lung .k 704 to 1431 1 to 728       728/729
(99 %)
1 diff
(99.9 %id)
TI_154050410   .k 707 to 1436 838 to 109 G2A     730/1057
(69 %)
9 diff
(99.2 %id)
TI_154050376   .k 708 to 1435 837 to 114 D7X AAA   724/926
(78 %)
6 diff
(99.4 %id)
TI_149293782   .k 714 to 1435 803 to 83   AAA   721/965
(74 %)
6 diff
(99.4 %id)
BQ446577 Knee, Osteoarthritic Cartilage .k 759 to 1435 695 to 19   AAA   677/677
(100 %)
0 diff
(100 %id)
BU633903 cell lines, Chondrosarcoma .k 759 to 1430 689 to 19   AAA   671/671
(100 %)
3 diff
(99.6 %id)
BU629330 cell lines, Chondrosarcoma .k 761 to 1435 692 to 19   AAA   674/674
(100 %)
1 diff
(99.9 %id)
CA413967 Chondrosarcoma Grade II, Left Pelvis .k 762 to 1435 691 to 19 D7X AAA   673/673
(100 %)
1 diff
(99.9 %id)
BU682801 lung .k 775 to 1435 679 to 19   AAA   661/661
(100 %)
3 diff
(99.6 %id)
BE706111 head_neck .k 780 to 1097 1 to 319       319/341
(93 %)
9 diff
(97.4 %id)
AW813162 stomach .k 785 to 899 1 to 118       118/118
(100 %)
10 diff
(91.6 %id)
BU557788 adenocarcinoma, cell line, breast .k 797 to 1435 1 to 639       639/982
(65 %)
1 diff
(99.9 %id)
AA643868 normal prostate, Prostate .k 800 to 1435 633 to 1 G10A S11A I13S T14P C15A ...     633/633
(100 %)
6 diff
(99.1 %id)
BM984779 lung .k 809 to 1435 645 to 19 A114V AAA   627/630
(99 %)
1 diff
(99.9 %id)
AI147754 brain, glioblastoma (pooled) .k 818 to 1436 620 to 2 N53T     619/620
(99 %)
5 diff
(99.2 %id)
AL528070 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .k 831 to 1367 567 to 29 F18X S28X D31X D38N E43X ...     539/571
(94 %)
8 diff
(98.6 %id)
BU738580 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .k 834 to 1430 615 to 19   AAA   597/622
(95 %)
0 diff
(100 %id)
BM789076 Ascites, stomach .k 886 to 1253 1 to 368       368/368
(100 %)
7 diff
(98.1 %id)
CA413922 Chondrosarcoma Grade II, Left Pelvis .k 888 to 1435 566 to 19   AAA   548/548
(100 %)
1 diff
(99.9 %id)
AI911192 pooled .k 903 to 1435 533 to 1       533/537
(99 %)
5 diff
(99.1 %id)
AW573302 pooled .k 903 to 1259 357 to 1       357/361
(98 %)
20 diff
(94.5 %id)
BE326417 carcinoid, lung .k 903 to 1434 532 to 1       532/560
(95 %)
19 diff
(96.7 %id)
DB355714 whole embryo, mainly head .k 905 to 1435 532 to 1       532/572
(93 %)
15 diff
(97.4 %id)
AA516465 colon .k 917 to 1435 535 to 23   AAA   513/535
(95 %)
10 diff
(98.2 %id)
AI183624 lung .k 947 to 1211 265 to 1       265/265
(100 %)
4 diff
(98.5 %id)
EL948941 eyeball .k 979 to 1238 48 to 313       266/313
(84 %)
11 diff
(96.5 %id)
AA635465 normal prostate, Prostate .k 981 to 1426 454 to 11       444/454
(97 %)
2 diff
(99.6 %id)
DB558970 hypothalamus .k 985 to 1429 1 to 444     Submitted on the opposite strand 444/444
(100 %)
3 diff
(99.4 %id)
DB572895 hypothalamus .k 987 to 1433 1 to 447     Submitted on the opposite strand 447/449
(99 %)
1 diff
(99.8 %id)
AI206616 pooled germ cell tumors .k 1012 to 1435 423 to 1       423/423
(100 %)
0 diff
(100 %id)
BM746075 stomach .k 1026 to 1425 1 to 400       400/400
(100 %)
0 diff
(100 %id)
AI023592   .k 1036 to 1425 405 to 18   AAA   388/388
(100 %)
2 diff
(99.5 %id)
AA707409 liver and spleen .k 1059 to 1436 378 to 2       377/378
(99 %)
0 diff
(100 %id)
AI925322 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .k 1072 to 1435 381 to 18   AAA   364/364
(100 %)
1 diff
(99.8 %id)
EC477042 Prostate .k 1074 to 1175 1 to 103       103/103
(100 %)
2 diff
(98.1 %id)
AI825703 pooled germ cell tumors .k 1082 to 1435 356 to 1       356/356
(100 %)
2 diff
(99.5 %id)
AI698634 pooled .k 1101 to 1436 341 to 6       336/341
(98 %)
0 diff
(100 %id)
CN261758 embryonic stem cells, DMSO-treated H9 cellline .l-u 1 to 560 1 to 560 exact tiling clone,   560/560
(100 %)
0 diff
(100 %id)
CN261757 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .l-u 512 to 938 1 to 427   tiling clone,   427/427
(100 %)
0 diff
(100 %id)
BG988728 head_neck .l-u 623 to 1097 21 to 497   tiling clone,   477/497
(95 %)
6 diff
(98.8 %id)
BM561618 blood, natural killer cells, cell line .m 1 to 918 1 to 931 exact tiling clone,   928/1064
(87 %)
31 diff
(97.1 %id)
BC128553 PCR rescued clones .n-u 1 to 150 155 to 6   tiling clone, Submitted on the opposite strand 150/172
(87 %)
0 diff
(100 %id)
BF992497 placenta_normal .n-u 48 to 381 1 to 334 P7R G11P Y12D tiling clone,   334/334
(100 %)
5 diff
(98.6 %id)
BU659731 blood .o-u 1 to 358 1 to 358 exact tiling clone,   358/358
(100 %)
1 diff
(99.8 %id)
CN261756 embryonic stem cells, DMSO-treated H9 cellline Gene WDR83, variant not shown         Suspected internal deletion, this clone was ignored    
CN278436 embryonic stem cells, DMSO-treated H9 cellline Gene WDR83, variant not shown         This clone was ignored    
BP426255 small intestine Gene WDR83, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BP347488 brain Gene WDR83, variant not shown         Suspected internal deletion, this clone was ignored    
DB062543.
matches multiple genes
testis Gene WDR83, variant not shown       capped This clone was ignored, also hits gene hoyuri    
DB062543.
matches multiple genes
testis Gene hoyuri, variant not shown       capped This clone was ignored, also hits gene hoyuri    
DB339400.
matches multiple genes
testis Gene WDR83, variant not shown         This clone was ignored, also hits gene hoyuri    
DB339400.
matches multiple genes
testis Gene hoyuri, variant not shown         This clone was ignored, also hits gene hoyuri    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n-u, .o-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI