To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene C9orf131TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
94 supporting clones for gene C9orf131 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB068600 testis .a 1 to 543 2 to 544   tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
DB073455 testis .a 11 to 551 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
TI_44350730   .a 13 to 898 123 to 1012       890/1014
(87 %)
35 diff
(96.6 %id)
BI561511 testis .a 16 to 898 1 to 887       887/889
(99 %)
33 diff
(96.3 %id)
NM_203299.2   .a 18 to 3407 1 to 3390 exact RefSeq, AAA   3390/3390
(100 %)
0 diff
(100 %id)
BC045643 testis .a 21 to 3407 1 to 3387 S218Y W222L tiling clone, available from MGC, AAA   3387/3387
(100 %)
3 diff
(100.0 %id)
DB455864 testis .a 21 to 520 1 to 500       500/500
(100 %)
1 diff
(99.8 %id)
DB091295 testis .a 22 to 594 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DB072510 testis .a 23 to 568 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DB074394 testis .a 23 to 566 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DB072635 testis .a 25 to 562 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DB462588 testis .a 32 to 514 1 to 483       483/483
(100 %)
1 diff
(99.8 %id)
DB080175 testis .a 33 to 558 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB080272 testis .a 33 to 583 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB094146 testis .a 33 to 578 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DB100156 testis .a 33 to 617 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
AK097595 testis .a 34 to 3398 1 to 3365 W222L W414* tiling clone, available from FLJ,   3365/3365
(100 %)
5 diff
(99.9 %id)
DB040402 testis .a 35 to 590 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB063933 testis .a 35 to 581 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB099976 testis .a 35 to 616 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB098396 testis .a 36 to 602 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB453230 testis .a 40 to 528 1 to 489       489/489
(100 %)
0 diff
(100 %id)
DB073969 testis .a 41 to 570 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
DB074528 testis .a 41 to 585 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB094187 testis .a 41 to 587 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB096353 testis .a 41 to 571 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DB097169 testis .a 41 to 639 2 to 600   capped   599/599
(100 %)
1 diff
(99.9 %id)
DB086606 testis .a 46 to 629 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
BG717931 testis .a 47 to 786 1 to 753       753/799
(94 %)
31 diff
(96.2 %id)
DB072618 testis .a 47 to 489 2 to 445   capped   444/444
(100 %)
1 diff
(99.8 %id)
DB442860 testis .a 50 to 503 1 to 454       454/455
(99 %)
1 diff
(99.8 %id)
DB097297 testis .a 51 to 621 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB098347 testis .a 51 to 639 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB091821 testis .a 52 to 604 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB064496 testis .a 53 to 636 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB080024 testis .a 53 to 626 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB082730 testis .a 53 to 610 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB081876 testis .a 59 to 569 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
BI832391 brain, medulla .a 65 to 714 9 to 663   tiling clone,   655/1094
(59 %)
11 diff
(99.0 %id)
TI_57171226   .a 65 to 714 9 to 663   AAA   655/1075
(60 %)
11 diff
(99.0 %id)
DB092940 testis .a 66 to 618 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
EL733922 mixed .a 89 to 717 1 to 629       629/655
(96 %)
6 diff
(99.1 %id)
DB091135 testis .b 1 to 581 7 to 587   tiling clone, capped   586/586
(100 %)
0 diff
(100 %id)
TI_44348268   .b 3 to 804 87 to 893       807/893
(90 %)
22 diff
(97.6 %id)
BI559472 testis .b 4 to 804 1 to 806   tiling clone,   806/806
(100 %)
20 diff
(97.6 %id)
NM_001040410.1   .b 8 to 3292 1 to 3285 exact RefSeq, AAA   3285/3285
(100 %)
0 diff
(100 %id)
DB096349 testis .c 1 to 546 2 to 546   tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
NM_001040412.1   .c 10 to 3266 1 to 3257 exact RefSeq, AAA   3257/3257
(100 %)
0 diff
(100 %id)
DB093341 testis .c 36 to 586 2 to 552   tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DB451922 testis .c 43 to 540 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
AL040419 testis .c 986 to 1743 1 to 756   tiling clone,   756/756
(100 %)
4 diff
(99.5 %id)
AL040557 testis .c 986 to 1279 1 to 295       295/295
(100 %)
1 diff
(99.7 %id)
AL043918 testis .c 1267 to 1865 1 to 599   tiling clone,   599/599
(100 %)
0 diff
(100 %id)
AA382319 testis .c 1825 to 2085 1 to 260   tiling clone,   260/260
(100 %)
2 diff
(99.3 %id)
CD359798 testis .c 1870 to 2668 1 to 811   tiling clone,   811/912
(88 %)
22 diff
(97.6 %id)
CV361237 head_neck .c 1918 to 2100 209 to 24     Submitted on the opposite strand 186/209
(88 %)
0 diff
(100 %id)
CV361252 head_neck .c 1918 to 2100 209 to 24     Submitted on the opposite strand 186/209
(88 %)
0 diff
(100 %id)
BX103484 pooled germ cell tumors .c 2412 to 2856 1 to 445   tiling clone,   445/448
(99 %)
2 diff
(99.6 %id)
AL040420 testis .c 2507 to 3257 768 to 20   tiling clone, AAA   749/750
(99 %)
3 diff
(99.6 %id)
AL133575 testis .c 2689 to 3257 1 to 569   available from DKFZ, AAA   569/569
(100 %)
0 diff
(100 %id)
DB528003 testis .c 2777 to 3257 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
AI654615 pooled germ cell tumors .c 2779 to 3255 488 to 12   AAA   477/477
(100 %)
0 diff
(100 %id)
DB524019 testis .c 2799 to 3257 1 to 460     Submitted on the opposite strand 460/460
(100 %)
3 diff
(99.4 %id)
DB518708 testis .c 2806 to 3257 1 to 452     Submitted on the opposite strand 452/452
(100 %)
0 diff
(100 %id)
DB521301 testis .c 2809 to 3266 1 to 458   tiling clone, Submitted on the opposite strand 458/458
(100 %)
1 diff
(99.8 %id)
AI961061 pooled germ cell tumors .c 2818 to 3262 447 to 4       444/447
(99 %)
0 diff
(100 %id)
AL043919 testis .c 2821 to 3236 415 to 1       415/415
(100 %)
2 diff
(99.6 %id)
DB517448 testis .c 2829 to 3259 1 to 431   AAA Submitted on the opposite strand 431/431
(100 %)
0 diff
(100 %id)
DB511950 testis .c 2846 to 3259 1 to 413   AAA Submitted on the opposite strand 413/413
(100 %)
4 diff
(99.1 %id)
AA860210   .c 2852 to 3259 407 to 1       407/407
(100 %)
3 diff
(99.3 %id)
AA905118 pooled .c 2858 to 3262 405 to 1       405/405
(100 %)
0 diff
(100 %id)
DB508016 testis .c 2866 to 3259 1 to 399   AAA Submitted on the opposite strand 399/399
(100 %)
19 diff
(95.3 %id)
AI825165 pooled germ cell tumors .c 2872 to 3262 394 to 5       390/394
(98 %)
0 diff
(100 %id)
BE717047 head_neck .c 2913 to 3152 242 to 1       242/242
(100 %)
8 diff
(96.7 %id)
AW450769   .c 2938 to 3259 339 to 18   AAA   322/322
(100 %)
1 diff
(99.7 %id)
AA907344 pooled .c 2961 to 3237 277 to 1       277/277
(100 %)
0 diff
(100 %id)
DB083816 testis .d 1 to 545 2 to 546   tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
DB072581 testis .d 5 to 532 8 to 535   capped   528/528
(100 %)
1 diff
(99.9 %id)
DB072610 testis .d 5 to 531 8 to 534   capped   527/527
(100 %)
1 diff
(99.9 %id)
DB446820 testis .d 10 to 457 1 to 447       447/447
(100 %)
8 diff
(98.3 %id)
NM_001040411.1   .d 10 to 3191 1 to 3182 exact RefSeq, AAA   3182/3182
(100 %)
0 diff
(100 %id)
DB081756 testis .d 13 to 545 8 to 540   capped   533/533
(100 %)
2 diff
(99.7 %id)
DB458519 testis .d 22 to 505 1 to 484       484/484
(100 %)
2 diff
(99.6 %id)
BI461057 testis .d 35 to 809 1 to 774   tiling clone,   774/774
(100 %)
10 diff
(98.8 %id)
DB086874 testis .d 41 to 597 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DB089650 testis .d 50 to 500 2 to 452   capped   451/452
(99 %)
2 diff
(99.6 %id)
DB097641 testis .d 50 to 638 2 to 590   tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
DB054753 testis .e -9 to 549 2 to 560 E46G W163L tiling clone, capped   559/559
(100 %)
3 diff
(99.5 %id)
DB443091 testis .f 1 to 360 8 to 368   tiling clone,   368/449
(81 %)
4 diff
(99.2 %id)
DB077276 testis .f 346 to 916 2 to 572 W149L tiling clone, capped   571/571
(100 %)
2 diff
(99.7 %id)
BF772881 epid_tumor .g-u 1 to 232 119 to 350   tiling clone,   232/350
(66 %)
9 diff
(97.5 %id)
BX646153   .g-u 165 to 768 1 to 605   tiling clone,   605/605
(100 %)
1 diff
(99.9 %id)
DB078901 testis .h 1 to 578 2 to 580 exact tiling clone, capped   579/579
(100 %)
3 diff
(99.5 %id)
AK302123 testis Gene C9orf131, variant not shown         Suspected internal deletion, this clone was ignored    
DC397827 testis Gene C9orf131, variant not shown         Suspected internal deletion, this clone was ignored    
DB078998 testis Gene C9orf131, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C