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Gene C1orf158TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
54 supporting clones for gene C1orf158 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC029894 Brain, adult medulla C1orf158.a 1 to 1018 1 to 1018 F191L tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1018/1018
(100 %)
1 diff
(100.0 %id)
BI829815 brain, medulla C1orf158.a 1 to 718 1 to 735       599/735
(81 %)
25 diff
(96.6 %id)
TI_57176381   C1orf158.a 1 to 718 72 to 806       599/806
(74 %)
22 diff
(97.3 %id)
NM_152290.2   C1orf158.a 1 to 1018 1 to 1018 exact RefSeq, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1018/1018
(100 %)
0 diff
(100 %id)
AA412565.
matches multiple genes
  C1orf158.a 3 to 410 1 to 408     also hits gene SGMS1 408/408
(100 %)
0 diff
(100 %id)
DB446921 testis C1orf158.a 5 to 442 1 to 438       438/445
(98 %)
3 diff
(99.4 %id)
BI825720 brain, medulla C1orf158.a 5 to 770 1 to 769       769/769
(100 %)
6 diff
(99.3 %id)
TI_57170275   C1orf158.a 5 to 770 30 to 798       769/798
(96 %)
10 diff
(98.8 %id)
BP291955 lung C1orf158.a 5 to 578 1 to 574       574/574
(100 %)
3 diff
(99.5 %id)
BI825136 brain, medulla C1orf158.a 6 to 756 1 to 753       753/753
(100 %)
2 diff
(99.8 %id)
TI_57170183   C1orf158.a 6 to 756 111 to 863       753/863
(87 %)
8 diff
(99.1 %id)
AA411967   C1orf158.a 10 to 447 8 to 442       435/442
(98 %)
6 diff
(98.7 %id)
DC365405 ovary C1orf158.a 10 to 579 1 to 570       570/570
(100 %)
0 diff
(100 %id)
BM554040 brain, medulla C1orf158.a 29 to 1019 21 to 1010 F191L H193T F194L     990/1032
(95 %)
19 diff
(98.2 %id)
BI561272 testis C1orf158.a 33 to 619 57 to 646       590/654
(90 %)
22 diff
(96.7 %id)
TI_44350916   C1orf158.a 33 to 619 175 to 764       590/772
(76 %)
19 diff
(97.6 %id)
AA421403   C1orf158.a 36 to 423 1 to 388       388/388
(100 %)
1 diff
(99.8 %id)
BX094234   C1orf158.a 37 to 717 1 to 681       681/681
(100 %)
0 diff
(100 %id)
TI_149302541   C1orf158.a 94 to 1018 1001 to 79 L3X S12X S23Q G29E W31X ... AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 923/994
(92 %)
16 diff
(98.4 %id)
AI825455 pooled germ cell tumors C1orf158.a 127 to 285 161 to 1       161/168
(95 %)
3 diff
(98.3 %id)
TI_1948071888   C1orf158.a 206 to 491 111 to 396   fully sequenced,   286/302
(94 %)
7 diff
(97.7 %id)
TI_1948072046   C1orf158.a 206 to 476 121 to 391   fully sequenced,   271/287
(94 %)
6 diff
(98.0 %id)
TI_1948072215   C1orf158.a 206 to 520 119 to 433   fully sequenced,   315/331
(95 %)
6 diff
(98.2 %id)
TI_1948072383   C1orf158.a 206 to 486 114 to 394   fully sequenced,   281/297
(94 %)
6 diff
(98.0 %id)
CV030214 mixed C1orf158.a 217 to 799 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BM980714 lung, Primary Lung Cystic Fibrosis EpithelialCells C1orf158.a 286 to 1018 753 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 735/735
(100 %)
9 diff
(98.8 %id)
CB241951 Human Lung Epithelial cells, lung C1orf158.a 344 to 1018 693 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 675/675
(100 %)
2 diff
(99.8 %id)
TI_1948072047   C1orf158.a 446 to 800 480 to 126   fully sequenced,   355/382
(92 %)
0 diff
(100 %id)
BE045979 pooled germ cell tumors C1orf158.a 450 to 778 329 to 1       329/331
(99 %)
14 diff
(95.8 %id)
BG483162 lung C1orf158.a 465 to 619 1 to 154       576/578
(99 %)
13 diff
(97.8 %id)
BE503389 pooled germ cell tumors C1orf158.a 469 to 1018 550 to 1       550/550
(100 %)
9 diff
(98.4 %id)
TI_1948071889   C1orf158.a 469 to 800 455 to 124   fully sequenced,   332/359
(92 %)
0 diff
(100 %id)
TI_1948072384   C1orf158.a 483 to 800 445 to 128   fully sequenced,   318/345
(92 %)
0 diff
(100 %id)
TI_1948072216   C1orf158.a 490 to 800 436 to 126   fully sequenced,   311/338
(92 %)
0 diff
(100 %id)
AA889516   C1orf158.a 553 to 1019 475 to 9       467/475
(98 %)
0 diff
(100 %id)
AA758889   C1orf158.a 575 to 1019 452 to 8       445/452
(98 %)
0 diff
(100 %id)
AI203603   C1orf158.a 581 to 1019 443 to 5   tiling clone,   439/443
(99 %)
0 diff
(100 %id)
DB512072 testis C1orf158.a 595 to 1018 1 to 424     Submitted on the opposite strand 424/424
(100 %)
1 diff
(99.8 %id)
AI027239   C1orf158.a 602 to 1018 433 to 17   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 417/417
(100 %)
1 diff
(99.8 %id)
AA421166   C1orf158.a 679 to 1019 343 to 3       341/343
(99 %)
0 diff
(100 %id)
AA412736   C1orf158.a 691 to 1019 333 to 5       329/333
(98 %)
0 diff
(100 %id)
AK298760 ovary C1orf158.b 1 to 888 1 to 888 exact tiling clone,   888/888
(100 %)
0 diff
(100 %id)
CF887467 lung, Primary Lung Cystic Fibrosis EpithelialCells C1orf158.b 22 to 691 1 to 670   fully sequenced,   670/670
(100 %)
1 diff
(99.9 %id)
TI_149315251   C1orf158.b 628 to 1411 832 to 51       782/1046
(74 %)
0 diff
(100 %id)
CB851749 lung, Primary Lung Cystic Fibrosis EpithelialCells C1orf158.b 628 to 1411 792 to 11   tiling clone,   782/794
(98 %)
0 diff
(100 %id)
CF891309 lung, Primary Lung Cystic Fibrosis EpithelialCells C1orf158.b 661 to 1418 759 to 4   fully sequenced,   756/759
(99 %)
5 diff
(99.4 %id)
BX647383 human testis C1orf158.b 1176 to 5035 1 to 3861   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 3861/3861
(100 %)
6 diff
(99.9 %id)
AI656449 pooled germ cell tumors C1orf158.b 1942 to 2292 359 to 9       351/359
(97 %)
0 diff
(100 %id)
DB517762 testis C1orf158.b 1959 to 2290 1 to 332     Submitted on the opposite strand 332/333
(99 %)
8 diff
(97.6 %id)
BE503667 pooled germ cell tumors C1orf158.b 1960 to 2292 341 to 9       333/341
(97 %)
0 diff
(100 %id)
AA412422   C1orf158.b 2082 to 2292 214 to 4       211/214
(98 %)
0 diff
(100 %id)
AA609347   C1orf158.b 2133 to 2291 171 to 13   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 159/159
(100 %)
0 diff
(100 %id)
BQ771713 Chondrosarcoma Grade II, Left Pelvis C1orf158.c 1 to 694 714 to 19 S14X F155L tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 696/696
(100 %)
3 diff
(99.6 %id)
BU608072 Human Lung Epithelial cells, lung C1orf158.d 1 to 717 731 to 15 S12X tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 717/717
(100 %)
0 diff
(100 %id)
CN478763 Human Lung Epithelial cells, lung C1orf158.d 53 to 717 679 to 15   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 665/665
(100 %)
2 diff
(99.7 %id)
DB452212 testis C1orf158.e-u 1 to 508 1 to 509 V13L tiling clone,   509/509
(100 %)
6 diff
(98.9 %id)
DA270439 caudate nucleus C1orf158.f-u 1 to 471 2 to 472 exact tiling clone, capped   471/471
(100 %)
0 diff
(100 %id)
AK026705 Human lung Gene C1orf158, variant not shown       available from FLJ, AAA Suspected internal deletion, this clone was ignored    
AI825585 pooled germ cell tumors Gene C1orf158, variant not shown         This clone was ignored    
AI962705 pooled germ cell tumors Gene C1orf158, variant not shown         This clone was ignored    
AW136990   Gene C1orf158, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C