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Gene IQCKTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
231 supporting clones for gene IQCK back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF520570 heart .a 1 to 2550 1 to 2550 exact tiling clone, AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 2550/2550
(100 %)
1 diff
(100.0 %id)
NM_153208.1   .a 1 to 2550 1 to 2550 exact RefSeq, AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 2550/2550
(100 %)
1 diff
(100.0 %id)
DA571081 whole embryo, mainly head .a 650 to 1493 2 to 842   capped   841/841
(100 %)
6 diff
(99.3 %id)
CD687198 normal nasopharynx .a 661 to 1153 31 to 523       493/523
(94 %)
8 diff
(98.5 %id)
TI_57171695   .a 663 to 1587 55 to 983       927/984
(94 %)
23 diff
(97.7 %id)
DB057322 testis .a 667 to 1204 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
BC034823 Brain, adult medulla .a 670 to 2379 1 to 1710   available from MGC, AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 1710/1710
(100 %)
0 diff
(100 %id)
BI828047 brain, medulla .a 670 to 1587 1 to 922       920/923
(99 %)
18 diff
(98.1 %id)
TI_44171786   .a 672 to 1496 83 to 903       821/968
(84 %)
17 diff
(98.3 %id)
DA256128 caudate nucleus .a 673 to 1238 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BI551982 brain, hippocampus .a 673 to 1496 1 to 820       820/885
(92 %)
13 diff
(98.6 %id)
AL601339   .a 675 to 1499 1 to 828       828/829
(99 %)
9 diff
(99.0 %id)
BI562044 testis .a 677 to 1462 1 to 793       789/793
(99 %)
21 diff
(97.4 %id)
DB058966 testis .a 677 to 1218 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
AK315672 testis .a 678 to 1563 1 to 886       886/886
(100 %)
0 diff
(100 %id)
DC396247 testis .a 678 to 1273 1 to 597       597/597
(100 %)
1 diff
(99.9 %id)
DB450017.
matches multiple genes
testis .a 679 to 1161 1 to 482     also hits gene GPRC5B 482/482
(100 %)
15 diff
(96.9 %id)
DB455497.
matches multiple genes
testis .a 679 to 1142 1 to 464     also hits gene GPRC5B 464/464
(100 %)
0 diff
(100 %id)
DB031954 testis .a 679 to 1249 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BG772258 testis .a 682 to 1391 1 to 708       708/856
(82 %)
6 diff
(99.3 %id)
DA269340 caudate nucleus .a 683 to 1243 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB457150 testis .a 684 to 1172 1 to 489       489/490
(99 %)
2 diff
(99.6 %id)
TI_44351080   .a 684 to 1462 134 to 919       782/919
(85 %)
24 diff
(97.4 %id)
BX345368 Neuroblastoma Cot 25-normalized .a 686 to 1619 1 to 933       933/933
(100 %)
6 diff
(99.4 %id)
BX345369 Neuroblastoma Cot 25-normalized .a 686 to 1661 1 to 964       964/995
(96 %)
27 diff
(97.3 %id)
BQ882777 brain, neuroblastoma, cell line .a 686 to 1304 1 to 620       620/957
(64 %)
6 diff
(99.4 %id)
DB445541.
matches multiple genes
testis .a 687 to 1096 1 to 404     also hits gene GPRC5B 404/404
(100 %)
11 diff
(97.3 %id)
CD359380 testis .a 687 to 1541 1 to 861       859/885
(97 %)
13 diff
(98.6 %id)
AA304731 retina .a 688 to 1045 1 to 359       359/359
(100 %)
3 diff
(99.2 %id)
DB056335 testis .a 689 to 1260 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA747649   .a 690 to 1265 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB047625 testis .a 690 to 1266 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DB251735 uterus .a 690 to 1240 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BI459812 testis .a 691 to 1505 1 to 810       810/874
(92 %)
25 diff
(97.2 %id)
BG433896 Kidney .a 693 to 1301 1 to 608       608/725
(83 %)
11 diff
(98.5 %id)
CD684482 normal nasopharynx .a 694 to 1378 16 to 700       685/700
(97 %)
7 diff
(99.0 %id)
BP327609 prostata .a 694 to 1273 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DB487786 hypothalamus .a 696 to 1126 1 to 430       430/430
(100 %)
4 diff
(99.1 %id)
DB500252.
matches multiple genes
hypothalamus .a 696 to 1171 1 to 476     also hits gene GPRC5B 476/476
(100 %)
1 diff
(99.8 %id)
BU789181 insulinoma, Pancreas .a 702 to 1214 1 to 513       513/513
(100 %)
5 diff
(99.1 %id)
DA357514 subthalamic nucleus .a 709 to 1257 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DT216392 brain .a 709 to 1228 28 to 547       520/520
(100 %)
0 diff
(100 %id)
DB025460 testis .a 729 to 1270 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
CN314620 embryonic stem cells, DMSO-treated H9 cellline .a 731 to 1170 1 to 441       441/441
(100 %)
1 diff
(99.8 %id)
BQ883055 dorsal root ganglia .a 774 to 1510 27 to 764       738/981
(75 %)
42 diff
(95.8 %id)
BU195463 eye, retinoblastoma .a 798 to 1708 8 to 919       912/921
(99 %)
18 diff
(98.1 %id)
AI906808 breast .a 866 to 1075 7 to 216       210/257
(81 %)
6 diff
(97.7 %id)
AW956573   .a 880 to 1378 1 to 499       499/500
(99 %)
1 diff
(99.8 %id)
FN055289 breast carcinoma .a 880 to 947 71 to 4     Submitted on the opposite strand 68/76
(89 %)
0 diff
(100 %id)
AA344247 gall bladder .a 881 to 1136 1 to 255       255/255
(100 %)
2 diff
(99.3 %id)
CR739878   .a 912 to 1164 1 to 254   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 254/264
(96 %)
2 diff
(99.3 %id)
FN138220 breast carcinoma .a 928 to 1025 1 to 100       100/100
(100 %)
2 diff
(98.0 %id)
BI520472 brain, medulla .a 945 to 1418 246 to 718       473/718
(65 %)
10 diff
(98.7 %id)
TI_43963883   .a 945 to 1418 278 to 750       473/750
(63 %)
10 diff
(98.7 %id)
FN160787 breast carcinoma .a 957 to 1060 1 to 104       104/104
(100 %)
0 diff
(100 %id)
FN175592 breast carcinoma .a 961 to 1067 1 to 102       102/103
(99 %)
8 diff
(92.3 %id)
BF208995 bladder, carcinoma, cell line .a 1035 to 1693 1 to 684       684/684
(100 %)
75 diff
(89.1 %id)
CD556594 brain, Pituitary .a 1035 to 1804 33 to 814       782/912
(85 %)
36 diff
(96.1 %id)
BQ228764 large cell carcinoma, lung .a 1048 to 1947 24 to 924       901/926
(97 %)
12 diff
(98.8 %id)
BG189218   .a 1169 to 1942 1 to 772       772/772
(100 %)
20 diff
(97.5 %id)
FN060034 breast carcinoma .a 1261 to 1363 1 to 104       104/104
(100 %)
2 diff
(98.1 %id)
BG207839   .a 1299 to 2105 1 to 807       807/808
(99 %)
15 diff
(98.2 %id)
BG202595   .a 1305 to 2120 1 to 825       825/897
(91 %)
56 diff
(93.8 %id)
BG207838   .a 1305 to 2129 1 to 827       827/827
(100 %)
13 diff
(98.5 %id)
FN076808 breast carcinoma .a 1317 to 1386 1 to 70       70/74
(94 %)
1 diff
(98.7 %id)
FN117478 breast carcinoma .a 1321 to 1410 90 to 1     Submitted on the opposite strand 90/90
(100 %)
2 diff
(97.8 %id)
CD513712 brain, Pituitary .a 1323 to 1961 35 to 688       654/986
(66 %)
30 diff
(97.0 %id)
AI702208 carcinoid, lung .a 1326 to 1863 1 to 544     Submitted on the opposite strand 544/656
(82 %)
14 diff
(97.9 %id)
DV460224 cochlea, ear .a 1326 to 1529 1 to 204       204/204
(100 %)
0 diff
(100 %id)
W39307 parathyroid gland, parathyroid tumor .a 1347 to 1786 1 to 441       441/441
(100 %)
7 diff
(98.5 %id)
AA935710 carcinoid, lung .a 1354 to 1741 1 to 388     Submitted on the opposite strand 388/388
(100 %)
0 diff
(100 %id)
W86638 liver and spleen .a 1367 to 1784 1 to 425       425/425
(100 %)
7 diff
(98.4 %id)
BG182422   .a 1385 to 2167 1 to 783       783/783
(100 %)
27 diff
(96.6 %id)
BG187118   .a 1385 to 2173 1 to 789       789/790
(99 %)
20 diff
(97.5 %id)
BG204631   .a 1385 to 2046 1 to 666       666/804
(82 %)
51 diff
(93.7 %id)
BG195882   .a 1386 to 2159 1 to 775       775/776
(99 %)
15 diff
(98.1 %id)
BG197949   .a 1386 to 2162 1 to 777       777/780
(99 %)
4 diff
(99.5 %id)
BG208749   .a 1386 to 2192 1 to 802       802/803
(99 %)
23 diff
(97.2 %id)
BG210962   .a 1386 to 2182 1 to 799       799/801
(99 %)
42 diff
(94.8 %id)
BG215767   .a 1386 to 2177 1 to 785       785/786
(99 %)
36 diff
(95.5 %id)
BG216129   .a 1386 to 2175 1 to 788       788/788
(100 %)
16 diff
(98.0 %id)
BG218685   .a 1386 to 2192 1 to 805       805/806
(99 %)
19 diff
(97.7 %id)
BG219883   .a 1386 to 2323 1 to 935       935/938
(99 %)
41 diff
(95.7 %id)
BG200535   .a 1387 to 1612 1 to 228       228/228
(100 %)
6 diff
(97.4 %id)
BG201410   .a 1387 to 2188 1 to 800       800/809
(98 %)
15 diff
(98.2 %id)
BG207840   .a 1387 to 2185 1 to 798       798/799
(99 %)
22 diff
(97.3 %id)
BG217862   .a 1387 to 1984 1 to 598       598/796
(75 %)
15 diff
(98.2 %id)
BG205729   .a 1388 to 2094 50 to 763       714/769
(92 %)
32 diff
(95.9 %id)
BG193928   .a 1389 to 1963 46 to 622       577/827
(69 %)
52 diff
(93.8 %id)
BG214141   .a 1389 to 2143 46 to 806       761/836
(91 %)
67 diff
(92.0 %id)
AW837207 leiomios .a 1392 to 1784 1 to 393       393/393
(100 %)
6 diff
(98.5 %id)
BE067231 breast .a 1396 to 1911 1 to 516       516/516
(100 %)
9 diff
(98.3 %id)
BF353216 head_neck .a 1448 to 1781 1 to 335       335/335
(100 %)
2 diff
(99.5 %id)
AA482427.
matches multiple genes
ovarian tumor, ovary .a 1500 to 1937 8 to 445     also hits gene ZIM2andPEG3 438/445
(98 %)
8 diff
(98.3 %id)
BI520680 brain, medulla .a 1513 to 2304 815 to 1       815/815
(100 %)
32 diff
(96.1 %id)
TI_43963884   .a 1513 to 2304 815 to 1       815/815
(100 %)
32 diff
(96.1 %id)
BE172146 head_neck .a 1526 to 1743 17 to 234       218/239
(91 %)
6 diff
(97.5 %id)
EB386554 eye, optic nerve .a 1554 to 2389 1 to 836       836/836
(100 %)
1 diff
(99.9 %id)
CB160734 Liver .a 1617 to 2205 1 to 589       589/589
(100 %)
0 diff
(100 %id)
TI_43963880   .a 1622 to 2307 702 to 1       702/711
(98 %)
31 diff
(95.7 %id)
BF351617 head_neck .a 1636 to 1788 22 to 173       152/173
(87 %)
6 diff
(96.6 %id)
BQ006329 Chondrosarcoma, Left Pelvis .a 1667 to 2379 731 to 20   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 712/712
(100 %)
3 diff
(99.6 %id)
EC504162 Prostate .a 1685 to 1793 1 to 104       104/104
(100 %)
5 diff
(95.2 %id)
BX345367 Neuroblastoma Cot 25-normalized .a 1698 to 2534 841 to 1       841/841
(100 %)
41 diff
(95.2 %id)
AA033543 uterus .a 1720 to 2001 1 to 282   fully sequenced,   282/282
(100 %)
0 diff
(100 %id)
BF351606 head_neck .a 1751 to 2195 1 to 446       446/446
(100 %)
14 diff
(96.9 %id)
BF351616 head_neck .a 1751 to 2195 1 to 446       446/446
(100 %)
14 diff
(96.9 %id)
BU788926 insulinoma, Pancreas .a 1767 to 2365 599 to 1       599/599
(100 %)
1 diff
(99.9 %id)
AW070229 pooled .a 1829 to 2380 563 to 11   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 553/553
(100 %)
1 diff
(99.9 %id)
AI031963 parathyroid gland, parathyroid tumor .a 1847 to 2379 556 to 20   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 537/537
(100 %)
4 diff
(99.3 %id)
DB357909 whole embryo, mainly head .a 1856 to 2379 526 to 1       526/529
(99 %)
8 diff
(98.5 %id)
AI674220 Prostate .a 1873 to 2379 507 to 1       507/507
(100 %)
0 diff
(100 %id)
AW003694 Prostate .a 1889 to 2379 512 to 22   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 491/491
(100 %)
1 diff
(99.8 %id)
BM668351 eye, Retina Foveal and Macular .a 1900 to 2379 498 to 19   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 480/489
(98 %)
0 diff
(100 %id)
TI_151765061   .a 1903 to 2379 107 to 585   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 479/585
(81 %)
6 diff
(99.0 %id)
AA913722 pooled .a 1915 to 2369 455 to 1       455/455
(100 %)
1 diff
(99.8 %id)
BF055166 pooled .a 1917 to 2379 470 to 8       463/470
(98 %)
0 diff
(100 %id)
N51243 multiple sclerosis lesions .a 1918 to 2379 462 to 1       462/462
(100 %)
1 diff
(99.8 %id)
AA968465 pooled .a 1924 to 2379 463 to 8       456/463
(98 %)
0 diff
(100 %id)
BF844466 head_neck .a 1926 to 2068 1 to 143       143/143
(100 %)
0 diff
(100 %id)
AI245556 Kidney .a 1927 to 2384 459 to 2       458/459
(99 %)
0 diff
(100 %id)
AI243415 pooled .a 1929 to 2379 456 to 6       451/456
(98 %)
0 diff
(100 %id)
AA503870 colon .a 1930 to 2382 454 to 2       453/454
(99 %)
0 diff
(100 %id)
AI688566 pooled .a 1936 to 2396 463 to 3       461/463
(99 %)
0 diff
(100 %id)
AA757031   .a 1969 to 2396 427 to 2       426/427
(99 %)
0 diff
(100 %id)
AA034027 uterus .a 1971 to 2380 411 to 1   fully sequenced,   411/411
(100 %)
9 diff
(97.9 %id)
CA412204 Knee, Osteoarthritic Cartilage .a 2005 to 2379 394 to 20   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 375/375
(100 %)
9 diff
(97.6 %id)
W16437 parathyroid gland, parathyroid tumor .a 2016 to 2379 365 to 1       365/365
(100 %)
1 diff
(99.8 %id)
AW102692 pooled .a 2020 to 2396 381 to 3       379/381
(99 %)
0 diff
(100 %id)
BU607378 Human Lung Epithelial cells, lung .a 2023 to 2383 378 to 19   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 360/392
(91 %)
5 diff
(98.8 %id)
TI_149270793   .a 2076 to 2379 393 to 90   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 304/1011
(30 %)
5 diff
(99.6 %id)
TI_159714651   .a 2076 to 2379 393 to 90   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 304/994
(30 %)
5 diff
(99.5 %id)
BU673976 lung, Primary Lung Epithelial Cells .a 2076 to 2379 323 to 20   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 304/365
(83 %)
5 diff
(98.7 %id)
CN478643 Human Lung Epithelial cells, lung .a 2076 to 2379 323 to 20   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 304/366
(83 %)
5 diff
(98.7 %id)
AI003841   .a 2080 to 2379 308 to 9       300/308
(97 %)
0 diff
(100 %id)
AA709263   .a 2082 to 2379 302 to 4       299/302
(99 %)
0 diff
(100 %id)
AA557216 breast .a 2088 to 2393 306 to 1       306/306
(100 %)
1 diff
(99.7 %id)
FN169273 breast carcinoma .a 2117 to 2239 1 to 120       120/120
(100 %)
3 diff
(97.5 %id)
FN072008 breast carcinoma .a 2158 to 2251 1 to 93       93/106
(87 %)
2 diff
(98.2 %id)
FN099018 breast carcinoma .a 2167 to 2283 1 to 118       118/119
(99 %)
3 diff
(97.5 %id)
BF218140 brain, glioblastoma .a 2172 to 2386 1 to 216   tiling clone,   216/251
(86 %)
4 diff
(98.5 %id)
BI826138 brain, medulla .a 2201 to 2379 1 to 179   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 179/179
(100 %)
0 diff
(100 %id)
AA725755   .a 2216 to 2379 167 to 4       164/167
(98 %)
0 diff
(100 %id)
AF520569 heart .b 1 to 2419 1 to 2419 exact tiling clone, AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 2419/2419
(100 %)
1 diff
(100.0 %id)
DB044682 testis .b 673 to 1218 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BG900235 cartilage .b 676 to 1264 95 to 683       589/606
(97 %)
6 diff
(99.1 %id)
BG722118 testis .b 682 to 1374 1 to 693       693/694
(99 %)
5 diff
(99.3 %id)
BI826268 brain, medulla .b 685 to 1457 1 to 774       774/776
(99 %)
2 diff
(99.8 %id)
TI_57173349   .b 685 to 1457 30 to 803       774/805
(96 %)
8 diff
(99.1 %id)
DB043699 testis .b 689 to 1270 2 to 585   capped   584/584
(100 %)
4 diff
(99.4 %id)
AK093894 trachea .b 730 to 2473 1 to 1744   available from FLJ,   1744/1744
(100 %)
6 diff
(99.7 %id)
AX748356   .b 730 to 2473 1 to 1744       1744/1744
(100 %)
6 diff
(99.7 %id)
DB202302 trachea .b 731 to 1183 2 to 454   capped   453/453
(100 %)
3 diff
(99.4 %id)
BF131978 hypernephroma, Kidney .b 778 to 1308 1 to 539       539/539
(100 %)
18 diff
(96.7 %id)
DB348407 trachea .b 1927 to 2473 550 to 1       550/550
(100 %)
5 diff
(99.1 %id)
BQ315570 epid_tumor .b 2326 to 2663 57 to 393   tiling clone,   337/394
(85 %)
18 diff
(95.5 %id)
DA832841 placenta .b 2334 to 3068 2 to 739   tiling clone, fully sequenced, capped   738/738
(100 %)
7 diff
(99.1 %id)
AA989072 carcinoid, lung .b 2352 to 2628 275 to 1       275/275
(100 %)
2 diff
(99.3 %id)
BF364420 nervous_normal .b 2357 to 2626 1 to 271       271/271
(100 %)
6 diff
(97.8 %id)
DB529752.
matches multiple genes
hippocampus .b 2393 to 2807 415 to 1     also hits gene GPRC5B 415/415
(100 %)
12 diff
(97.2 %id)
FN164304 breast carcinoma .b 2402 to 2467 1 to 67       67/68
(98 %)
2 diff
(97.1 %id)
AI372763   .b 2547 to 2984 1 to 440   tiling clone,   440/440
(100 %)
6 diff
(98.7 %id)
AW631202 pooled .b 2893 to 3351 460 to 2   tiling clone,   459/460
(99 %)
0 diff
(100 %id)
AI674113 pooled .b 2944 to 3341 409 to 12   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 398/398
(100 %)
3 diff
(99.3 %id)
BF376089 testis_normal .b 2946 to 3116 11 to 180       170/185
(91 %)
6 diff
(96.8 %id)
DB379239 placenta .b 3038 to 3350 312 to 1   fully sequenced,   312/312
(100 %)
8 diff
(97.5 %id)
AW138537   .b 3057 to 3349 310 to 18   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 293/294
(99 %)
4 diff
(98.7 %id)
AK301933 testis .c 1 to 940 1 to 940 exact tiling clone,   940/940
(100 %)
0 diff
(100 %id)
R71055 placenta .c 16 to 374 1 to 359       359/361
(99 %)
10 diff
(97.3 %id)
R67648 breast .c 16 to 404 1 to 393       393/479
(82 %)
12 diff
(97.5 %id)
R67649 breast .c 1236 to 1617 393 to 2   tiling clone,   392/404
(97 %)
0 diff
(100 %id)
R71056 placenta .c 1288 to 1612 346 to 11   tiling clone,   336/356
(94 %)
0 diff
(100 %id)
BX500522 Liver .d 1 to 692 1 to 694 A2R M192I tiling clone,   694/694
(100 %)
7 diff
(99.0 %id)
DC338214 subthalamic nucleus .e 1 to 566 6 to 572   tiling clone,   572/572
(100 %)
1 diff
(99.9 %id)
BM543564 brain, hippocampus .e 27 to 957 1 to 942 M184N E185G D186G D187R A188C ... tiling clone,   942/1000
(94 %)
25 diff
(97.5 %id)
DC415230 trachea .e 32 to 578 1 to 547       547/547
(100 %)
0 diff
(100 %id)
AI125688   .e 494 to 966 478 to 6   tiling clone,   473/478
(98 %)
0 diff
(100 %id)
AW388425 stomach .e 601 to 842 1 to 240       240/240
(100 %)
3 diff
(98.8 %id)
DB515451 testis .e 687 to 966 1 to 280     Submitted on the opposite strand 280/282
(99 %)
10 diff
(96.5 %id)
AK303998 trachea .f 1 to 884 1 to 884 exact tiling clone,   884/884
(100 %)
0 diff
(100 %id)
DA624775 Kidney .g 1 to 552 2 to 553 exact tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
TI_57200138   .h -10 to 657 29 to 695 F14S T15P R16G T17R P18R ...     667/832
(80 %)
8 diff
(99.1 %id)
BI819279 pooled brain, lung, testis .h -8 to 657 1 to 665 F14S T15P R16G T17R P18R ... tiling clone,   665/802
(82 %)
4 diff
(99.6 %id)
TI_57174922   .i 1 to 689 26 to 715 exact tiling clone,   690/715
(96 %)
7 diff
(99.1 %id)
BI827236 brain, medulla .i 5 to 689 1 to 686 exact     686/686
(100 %)
1 diff
(99.9 %id)
BP332230 renal proximal tubule .j -8 to 572 1 to 581 exact tiling clone,   581/583
(99 %)
6 diff
(99.0 %id)
CR605335 Placenta Cot 25-normalized .k 1 to 1715 2 to 1716 exact tiling clone,   1716/1716
(100 %)
0 diff
(100 %id)
BX339662 Placenta Cot 25-normalized .k 24 to 935 27 to 922 I111F P112H S113H S114L fully sequenced,   896/922
(97 %)
7 diff
(99.3 %id)
BG203183   .k 399 to 952 1 to 547 P6S K7*     547/828
(66 %)
21 diff
(97.5 %id)
BC010515 Brain, glioblastoma with EGFR amplification .k 550 to 1910 1 to 1361 R68N Q69* tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 1361/1361
(100 %)
4 diff
(99.8 %id)
BF344404 brain, glioblastoma with EGFR amplification .k 550 to 1312 28 to 789 S37L L38A L39P L40A T41D ... available from MGC,   762/791
(96 %)
18 diff
(97.8 %id)
BU070093 insulinoma, Pancreas .k 591 to 1131 1 to 541       541/541
(100 %)
5 diff
(99.1 %id)
BX339661 Placenta Cot 25-normalized .k 905 to 1715 811 to 1   fully sequenced,   811/811
(100 %)
1 diff
(99.9 %id)
TI_149285981   .k 1195 to 1967 845 to 84   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 762/798
(95 %)
22 diff
(97.3 %id)
TI_149306053   .k 1302 to 1907 690 to 85   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 606/914
(66 %)
1 diff
(99.9 %id)
BM978646 lung, Primary Lung Epithelial Cells .k 1302 to 1907 624 to 19   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 606/622
(97 %)
1 diff
(99.9 %id)
BU069860 insulinoma, Pancreas .k 1363 to 1960 606 to 9       598/606
(98 %)
0 diff
(100 %id)
BM971814 lung .k 1394 to 1967 590 to 19   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 572/572
(100 %)
2 diff
(99.7 %id)
AI674208 Prostate .k 1421 to 1964 544 to 1       544/544
(100 %)
2 diff
(99.7 %id)
AI025720 parathyroid gland, parathyroid tumor .k 1478 to 1960 486 to 5       482/486
(99 %)
0 diff
(100 %id)
AI292279 placenta .k 1487 to 1960 478 to 5       474/478
(99 %)
0 diff
(100 %id)
AA482575.
matches multiple genes
ovarian tumor, ovary .k 1489 to 1959 470 to 1     also hits gene CHRAC1 470/470
(100 %)
3 diff
(99.4 %id)
AW590974 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .k 1554 to 1960 411 to 5       407/411
(99 %)
0 diff
(100 %id)
AI265971 placenta .k 1585 to 1960 380 to 5       376/380
(98 %)
0 diff
(100 %id)
AI862936 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .k 1585 to 1913 327 to 1       327/334
(97 %)
8 diff
(97.7 %id)
W02823 melanocyte .k 1663 to 1918 43 to 302   fully sequenced,   260/302
(86 %)
6 diff
(98.1 %id)
BG898052 cartilage .k 1669 to 1933 130 to 394       265/321
(82 %)
6 diff
(98.2 %id)
DB529472 hippocampus .k 1672 to 2066 406 to 8       399/407
(98 %)
0 diff
(100 %id)
H52740 brain .k 1677 to 2118 1 to 443       443/445
(99 %)
10 diff
(97.8 %id)
BF038964 adenocarcinoma, ovary .k 1677 to 2076 1 to 393       393/393
(100 %)
9 diff
(97.8 %id)
CB047470 Kidney .k 1679 to 2051 10 to 382       373/382
(97 %)
11 diff
(97.2 %id)
BE463593 Kidney .k 1684 to 2120 437 to 1       437/437
(100 %)
1 diff
(99.8 %id)
AI762410 Kidney .k 1687 to 2120 433 to 1       433/433
(100 %)
6 diff
(98.7 %id)
AI949260 2 pooled tumors (clear cell type), Kidney .k 1689 to 2132 444 to 1   tiling clone,   444/444
(100 %)
7 diff
(98.5 %id)
AI801872 carcinoid, lung .k 1691 to 2121 431 to 1       431/431
(100 %)
1 diff
(99.8 %id)
AA625307 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 1698 to 2103 1 to 406       406/406
(100 %)
4 diff
(99.1 %id)
BE672620 carcinoid, lung .k 1699 to 2126 428 to 1   tiling clone,   428/428
(100 %)
1 diff
(99.8 %id)
BF446654 carcinoid, lung .k 1699 to 2126 428 to 1       428/428
(100 %)
1 diff
(99.8 %id)
AI867575 pooled germ cell tumors .k 1700 to 2119 420 to 1       420/420
(100 %)
1 diff
(99.8 %id)
AI767652 Kidney .k 1700 to 2123 424 to 1       424/424
(100 %)
1 diff
(99.8 %id)
AA758619   .k 1705 to 1960 256 to 1       256/256
(100 %)
3 diff
(98.9 %id)
BP396426 pancreatic islet .k 1706 to 2050 345 to 1       345/345
(100 %)
1 diff
(99.8 %id)
AI784213 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .k 1733 to 1910 187 to 11   AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 177/177
(100 %)
2 diff
(98.9 %id)
AI655553 pooled germ cell tumors .k 1748 to 2126 379 to 1       379/379
(100 %)
2 diff
(99.5 %id)
AW628290 pooled .k 1771 to 2123 353 to 1       353/353
(100 %)
1 diff
(99.8 %id)
N73485 melanocyte .k 1888 to 2120 242 to 1   fully sequenced,   242/242
(100 %)
2 diff
(99.2 %id)
CV325615 epid_tumor .l-u 1 to 309 17 to 328   tiling clone,   312/328
(95 %)
27 diff
(91.8 %id)
BP193323 brain .l-u 91 to 670 1 to 582 S8Y G19V R24K R61K G80E ... tiling clone,   582/583
(99 %)
24 diff
(95.9 %id)
BP193361 brain .l-u 91 to 669 1 to 583 V31D R32K S33I V34R P35T ... tiling clone,   583/583
(100 %)
20 diff
(96.6 %id)
DA504625 brain .l-u 96 to 649 2 to 556   tiling clone, capped   555/555
(100 %)
2 diff
(99.7 %id)
AA608997   .m 1 to 450 448 to 1 A99Q V100Y P101L A102Q A103P ... tiling clone,   448/450
(99 %)
2 diff
(99.6 %id)
DB372131 ovary, tumor tissue .n 1 to 535 530 to 1 S5P H6I F7S T8P M9C ... tiling clone,   530/538
(98 %)
11 diff
(98.0 %id)
AI285921 pooled .o 1 to 447 446 to 1 T32Q I33S N34T P35Q T37H ... tiling clone,   446/446
(100 %)
2 diff
(99.6 %id)
AA917714 pooled .o 44 to 447 401 to 1   tiling clone,   401/401
(100 %)
5 diff
(98.8 %id)
AA812755   .p 1 to 473 473 to 1 exact tiling clone,   473/473
(100 %)
0 diff
(100 %id)
AA868513   .q 1 to 475 475 to 1 exact tiling clone,   475/475
(100 %)
0 diff
(100 %id)
AK000122 colon .r 1 to 1757 1 to 1757 exact tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 1757/1757
(100 %)
2 diff
(99.9 %id)
AW191585 Pancreas, pancreatic islets .r 1393 to 1757 1 to 366   tiling clone, AAA Possibly primed on the genome, locally A rich (32/35 A in genome downstream of last aligned base) 366/366
(100 %)
7 diff
(98.1 %id)
AA904809 pooled .r 1576 to 1727 152 to 1       152/152
(100 %)
1 diff
(99.4 %id)
AK311216 corpus callosum .s 1 to 945 2 to 946   tiling clone,   946/946
(100 %)
0 diff
(100 %id)
DA280710 corpus callosum .s 1 to 543 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
CN314621 embryonic stem cells, DMSO-treated H9 cellline .s 63 to 786 1 to 723       723/723
(100 %)
2 diff
(99.8 %id)
CN268130 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .t-u 1 to 523 1 to 522 exact tiling clone,   522/522
(100 %)
1 diff
(99.9 %id)
DB305824 brain Gene IQCK, variant not shown              
DA238858 brain Gene IQCK, variant not shown       capped      
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n, .o, .p, .q, .r, .s, .t-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C