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Gene TBC1D21TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
23 supporting clones for gene TBC1D21 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB460510 testis .a 1 to 491 1 to 491   tiling clone,   491/491
(100 %)
0 diff
(100 %id)
BC033516 Brain, adult medulla .a 18 to 1222 1 to 1205 exact tiling clone, available from MGC, AAA   1205/1205
(100 %)
1 diff
(100.0 %id)
BI831821 brain, medulla .a 18 to 759 1 to 744       744/744
(100 %)
10 diff
(98.7 %id)
TI_57175636   .a 18 to 759 92 to 835       744/835
(89 %)
15 diff
(98.3 %id)
NM_153356.1   .a 18 to 1222 1 to 1205 exact RefSeq, AAA   1205/1205
(100 %)
1 diff
(100.0 %id)
CR744184   .a 26 to 507 1 to 482       482/482
(100 %)
0 diff
(100 %id)
BE671790 pooled germ cell tumors .a 641 to 1222 582 to 1       582/582
(100 %)
3 diff
(99.5 %id)
BE551561 pooled germ cell tumors .a 685 to 1224 540 to 1       540/540
(100 %)
6 diff
(98.9 %id)
BE672329 pooled germ cell tumors .a 717 to 1222 506 to 1       506/507
(99 %)
2 diff
(99.7 %id)
AI636934 pooled germ cell tumors .a 759 to 1222 464 to 1       464/464
(100 %)
0 diff
(100 %id)
AI982582 pooled germ cell tumors .a 770 to 1222 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AI699921 pooled germ cell tumors .a 780 to 1222 443 to 1       443/444
(99 %)
2 diff
(99.6 %id)
AI220579   .a 781 to 1221 442 to 3       440/442
(99 %)
3 diff
(99.4 %id)
AI187397   .a 800 to 1221 423 to 3       421/423
(99 %)
1 diff
(99.8 %id)
DB525917 testis .a 810 to 1222 1 to 413     Submitted on the opposite strand 413/413
(100 %)
0 diff
(100 %id)
AI025028   .a 842 to 1224 388 to 6       383/388
(98 %)
2 diff
(99.5 %id)
AI024579   .a 891 to 1224 337 to 3       335/337
(99 %)
3 diff
(99.2 %id)
AW235736 pooled germ cell tumors .a 934 to 1222 292 to 1       290/292
(99 %)
5 diff
(98.3 %id)
AA846446   .a 962 to 1224 266 to 4       263/266
(98 %)
0 diff
(100 %id)
AA903414 pooled germ cell tumors .a 1048 to 1222 175 to 1       175/175
(100 %)
0 diff
(100 %id)
BM908181 brain, medulla .b 1 to 1008 19 to 1046 F204X A211G K229E P230A C231P ... tiling clone,   1026/1057
(97 %)
47 diff
(95.6 %id)
AB449907 brain .b 103 to 1005 1 to 903 exact tiling clone,   903/903
(100 %)
0 diff
(100 %id)
AI219755   Gene TBC1D21, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C