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Gene MGC23284TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
59 supporting clones for gene MGC23284 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK094837 caudate nucleus .a-u 1 to 2095 2 to 2100 K10Q S11K P12K V14S R15C ... tiling clone, available from FLJ,   2100/2100
(100 %)
4 diff
(99.9 %id)
DA254069 caudate nucleus .a-u 1 to 590 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DB306461 caudate nucleus .a-u 1573 to 2095 527 to 1 K10Q S11K P12K V14S R15C ... tiling clone,   527/527
(100 %)
3 diff
(99.5 %id)
DA807650 brain .b-u 1 to 540 2 to 542   tiling clone, to resequence, capped   541/541
(100 %)
10 diff
(98.2 %id)
DA807576 brain .b-u 338 to 885 2 to 549   tiling clone, capped   548/548
(100 %)
0 diff
(100 %id)
AA421449   .b-u 412 to 810 1 to 398       398/398
(100 %)
2 diff
(99.5 %id)
AY203928   .b-u 1597 to 3643 1 to 2049 exact tiling clone, AAA   2049/2049
(100 %)
8 diff
(99.7 %id)
AA350679 brain .b-u 2008 to 2166 1 to 159       159/159
(100 %)
0 diff
(100 %id)
R90860 brain .b-u 2255 to 2417 1 to 161       161/161
(100 %)
2 diff
(98.8 %id)
CN284762 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b-u 2468 to 2931 1 to 463       463/463
(100 %)
7 diff
(98.5 %id)
BG397105 melanotic melanoma, skin .b-u 2574 to 3348 1 to 769   tiling clone,   769/833
(92 %)
20 diff
(97.6 %id)
BM713291 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b-u 3099 to 3648 1 to 550   tiling clone, AAA   550/550
(100 %)
0 diff
(100 %id)
DB327237 brain .b-u 3255 to 3672 419 to 1   tiling clone, to resequence,   419/419
(100 %)
4 diff
(99.1 %id)
AA350678 brain .b-u 3461 to 3656 196 to 1       196/196
(100 %)
0 diff
(100 %id)
DA739179   .c 1 to 551 2 to 553 exact tiling clone, to resequence, capped   552/552
(100 %)
1 diff
(99.9 %id)
DB324607   .c 1286 to 1811 512 to 1   tiling clone, to resequence,   512/512
(100 %)
6 diff
(98.9 %id)
BG490079 large cell carcinoma, lung .d 1 to 730 1 to 728 exact tiling clone, available from MGC,   728/728
(100 %)
3 diff
(99.6 %id)
BC015583 Lung, large cell carcinoma .d 2 to 922 1 to 921 exact tiling clone, available from MGC, AAA   921/921
(100 %)
0 diff
(100 %id)
NR_024399.1   .d 2 to 922 1 to 921 exact RefSeq, AAA   921/921
(100 %)
0 diff
(100 %id)
DB636551 hippocampus .d 6 to 354 1 to 349 exact     349/349
(100 %)
2 diff
(99.5 %id)
BU951543 Pancreas, Purified pancreatic islet .d 34 to 264 1 to 231       231/231
(100 %)
1 diff
(99.6 %id)
BU951292 Pancreas, Purified pancreatic islet .d 472 to 922 451 to 1       451/451
(100 %)
1 diff
(99.8 %id)
DB064595 testis .e 1 to 567 2 to 569 exact tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
NR_024402.1   .e 75 to 2503 1 to 2429 exact RefSeq, tiling clone, AAA   2429/2429
(100 %)
0 diff
(100 %id)
BC050404 Brain, fetal, whole pooled .e 82 to 2162 1 to 2081 exact available from MGC, AAA   2081/2081
(100 %)
5 diff
(99.8 %id)
BQ067930 brain .e 83 to 1026 1 to 958 exact available from MGC,   958/1033
(92 %)
30 diff
(97.1 %id)
BM723048 eye, fetal eye .e 150 to 757 1 to 608       608/608
(100 %)
0 diff
(100 %id)
DB054264 testis .e 642 to 1181 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
CR738123 pooled .e 1216 to 1712 1 to 497       497/497
(100 %)
0 diff
(100 %id)
AI095822 uterus .e 1701 to 2158 455 to 2       454/455
(99 %)
0 diff
(100 %id)
DB552491 hippocampus .e 1776 to 2487 1 to 712     Submitted on the opposite strand 712/714
(99 %)
8 diff
(98.9 %id)
TI_154005355   .e 1842 to 2487 863 to 214   AAA   650/1007
(64 %)
0 diff
(100 %id)
BM677498 eye, fetal eye .e 1917 to 2500 606 to 19   AAA   588/588
(100 %)
3 diff
(99.5 %id)
BQ446432 Knee, Osteoarthritic Cartilage .e 1934 to 2503 588 to 19   AAA   570/570
(100 %)
1 diff
(99.9 %id)
AI635994 Kidney .e 1953 to 2402 450 to 1       450/450
(100 %)
1 diff
(99.8 %id)
AI339613 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2004 to 2402 399 to 1       399/399
(100 %)
0 diff
(100 %id)
AI343397 colon, colon tumor, RER+ .e 2066 to 2402 337 to 1       337/337
(100 %)
0 diff
(100 %id)
DA333744 hippocampus .f 1 to 587 2 to 589 exact tiling clone, capped   588/588
(100 %)
1 diff
(99.9 %id)
AA824376   .f 63 to 579 521 to 5   tiling clone,   517/521
(99 %)
0 diff
(100 %id)
DA170175 amygdala .g 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
TI_44185703   .g 30 to 836 9 to 818       809/818
(98 %)
22 diff
(97.4 %id)
BI522767 brain .g 52 to 836 1 to 788   tiling clone,   787/788
(99 %)
16 diff
(98.0 %id)
BX364431 Neuroblastoma Cot 25-normalized .g 335 to 1125 166 to 947   tiling clone, fully sequenced,   899/899
(100 %)
48 diff
(94.7 %id)
BX364430 Neuroblastoma Cot 25-normalized .g 1095 to 2024 923 to 1   tiling clone, fully sequenced,   923/923
(100 %)
21 diff
(97.8 %id)
BU430236 lymph .h 1 to 429 1 to 429   tiling clone,   429/429
(100 %)
15 diff
(96.6 %id)
BU430306 lymph .h 1 to 471 1 to 471       471/471
(100 %)
5 diff
(99.0 %id)
TI_154151611   .h 8 to 684 81 to 756   tiling clone,   676/677
(99 %)
13 diff
(98.1 %id)
TI_154151613   .h 8 to 577 81 to 650       570/715
(79 %)
38 diff
(94.7 %id)
BE379377 endometrium, adenocarcinoma cell line, uterus .h 313 to 1142 18 to 840   tiling clone,   823/843
(97 %)
17 diff
(98.0 %id)
AI432314 pooled .h 459 to 798 343 to 4   tiling clone,   340/343
(99 %)
0 diff
(100 %id)
TI_154088729   .h 860 to 1568 763 to 61   tiling clone,   703/909
(77 %)
0 diff
(100 %id)
BF900195 marrow .h 905 to 1336 447 to 9     Submitted on the opposite strand 439/448
(97 %)
0 diff
(100 %id)
T06992   .h 1286 to 1652 368 to 1   tiling clone,   368/368
(100 %)
1 diff
(99.8 %id)
BM547936 brain, hippocampus .i 1 to 1001 14 to 1024 exact tiling clone, AAA   1011/1024
(98 %)
35 diff
(96.6 %id)
DA165824 amygdala .i 8 to 582 2 to 576 exact capped   575/575
(100 %)
1 diff
(99.9 %id)
DA909855   .i 22 to 601 2 to 581 S90F capped   580/580
(100 %)
2 diff
(99.7 %id)
BQ225207 epithelioid carcinoma, Pancreas .j-u 1 to 837 1 to 849 R57X R70Q D71R L72P E73G ... tiling clone,   849/896
(94 %)
17 diff
(98.2 %id)
BX640980 human small intestine Gene MGC23284, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
DB306521 caudate nucleus Gene MGC23284, variant not shown              
DA256029 caudate nucleus Gene MGC23284, variant not shown       capped      
DA879367 Prostate Gene MGC23284, variant not shown       capped This clone was ignored    
DB330271 Prostate Gene MGC23284, variant not shown         This clone was ignored    
BX117011 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene MGC23284, variant not shown         Suspected internal deletion, this clone was ignored    
AA909148 pooled Gene MGC23284, variant not shown         This clone was ignored    
AI242071 pooled Gene MGC23284, variant not shown         This clone was ignored    
AI827514 pooled Gene MGC23284, variant not shown         This clone was ignored    
BE044505 pooled Gene MGC23284, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a-u, .b-u, .c, .d, .e, .f, .g, .h, .i, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes