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Gene UBQLNLTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
52 supporting clones for gene UBQLNL back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA641773 Liver .a-u 1 to 680 2 to 681   tiling clone, capped   680/680
(100 %)
0 diff
(100 %id)
DB020173 testis .a-u 134 to 680 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
NM_145053.4   .a-u 136 to 2468 1 to 2333 exact RefSeq, AAA   2333/2333
(100 %)
0 diff
(100 %id)
DB449112 testis .a-u 148 to 580 1 to 434       434/434
(100 %)
10 diff
(97.7 %id)
DB040930 testis .a-u 149 to 702 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BP371259 testis .a-u 152 to 738 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
DB040207 testis .a-u 153 to 713 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BI825528 brain, medulla .a-u 156 to 1022 1 to 883       883/1026
(86 %)
24 diff
(97.7 %id)
DB030753 testis .a-u 156 to 749 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
TI_57170419   .a-u 157 to 1022 53 to 934       882/1077
(81 %)
24 diff
(97.8 %id)
BI462302 testis .a-u 158 to 872 1 to 711       711/715
(99 %)
15 diff
(98.0 %id)
DB034105 testis .a-u 161 to 744 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
BG719342 testis .a-u 162 to 844 1 to 683       683/683
(100 %)
7 diff
(99.0 %id)
DB035045 testis .a-u 164 to 715 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BC034977 testis .a-u 167 to 2468 1 to 2302 C171R Y274H W379G tiling clone, available from MGC, AAA   2302/2302
(100 %)
7 diff
(99.7 %id)
DB460206 testis .a-u 167 to 621 1 to 455       455/455
(100 %)
0 diff
(100 %id)
DB029992 testis .a-u 168 to 737 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DB021956 testis .a-u 171 to 728 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DB028248 testis .a-u 171 to 701 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DB031544 testis .a-u 171 to 777 2 to 610   capped   609/609
(100 %)
2 diff
(99.7 %id)
DB059987 testis .a-u 178 to 722 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DB027731 testis .a-u 182 to 773 2 to 594   capped   593/594
(99 %)
4 diff
(99.4 %id)
DB055012 testis .a-u 182 to 742 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB022975 testis .a-u 184 to 736 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB044973 testis .a-u 184 to 748 2 to 566   capped   565/565
(100 %)
4 diff
(99.3 %id)
DB025371 testis .a-u 189 to 731 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DB031417 testis .a-u 189 to 797 2 to 610   capped   609/609
(100 %)
0 diff
(100 %id)
DB048704 testis .a-u 189 to 771 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DB060137 testis .a-u 200 to 738 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB034191 testis .a-u 217 to 776 2 to 561   capped   560/565
(99 %)
1 diff
(99.9 %id)
DB031120 testis .a-u 247 to 847 2 to 602   capped   601/601
(100 %)
1 diff
(99.9 %id)
BG336938 leiomyosarcoma cell line, uterus .a-u 275 to 1037 1 to 749       749/940
(79 %)
25 diff
(97.4 %id)
BC012183 Uterus, leiomyosarcoma .a-u 276 to 2458 1 to 2183 A275V W379G Q455E tiling clone, available from MGC, AAA   2183/2183
(100 %)
3 diff
(99.9 %id)
AK127987 testis .a-u 392 to 2458 443 to 2509 A275V W379G tiling clone, available from FLJ,   2067/2509
(82 %)
6 diff
(99.8 %id)
DN999285   .a-u 410 to 1070 9 to 669       661/669
(98 %)
6 diff
(99.2 %id)
TI_1948080247   .a-u 444 to 1164 125 to 854   fully sequenced,   730/854
(85 %)
10 diff
(98.9 %id)
TI_1948080419   .a-u 444 to 1140 126 to 824   fully sequenced, AAA   699/824
(84 %)
8 diff
(99.1 %id)
TI_1948080763   .a-u 446 to 1216 132 to 910   fully sequenced, AAA   779/910
(85 %)
8 diff
(99.2 %id)
TI_1948080590   .a-u 447 to 957 129 to 639   fully sequenced, AAA   511/639
(79 %)
54 diff
(91.6 %id)
CV028579 mixed .a-u 451 to 1056 1 to 606       606/606
(100 %)
1 diff
(99.9 %id)
TI_1948080591   .a-u 927 to 1860 1051 to 111   fully sequenced,   941/1051
(89 %)
35 diff
(96.7 %id)
TI_1948080420   .a-u 1110 to 1860 878 to 112   fully sequenced,   767/878
(87 %)
10 diff
(98.9 %id)
TI_1948080248   .a-u 1134 to 1860 840 to 110   fully sequenced,   731/840
(87 %)
12 diff
(98.6 %id)
TI_1948080764   .a-u 1186 to 1860 806 to 119   fully sequenced,   688/806
(85 %)
11 diff
(98.7 %id)
DB337572.
matches multiple genes
testis .a-u 1915 to 2458 544 to 1     also hits gene C1orf192 544/544
(100 %)
0 diff
(100 %id)
DB335773 testis .a-u 1936 to 2467 533 to 1       533/533
(100 %)
1 diff
(99.9 %id)
AI910861 pooled .a-u 2027 to 2469 445 to 3       443/445
(99 %)
0 diff
(100 %id)
DB525648 testis .a-u 2037 to 2468 1 to 432   tiling clone, Submitted on the opposite strand 432/432
(100 %)
2 diff
(99.6 %id)
AI014955   .a-u 2037 to 2459 426 to 6       421/426
(98 %)
0 diff
(100 %id)
AI377594   .a-u 2058 to 2459 410 to 9       402/410
(98 %)
0 diff
(100 %id)
AI028325   .a-u 2069 to 2459 393 to 3       391/393
(99 %)
0 diff
(100 %id)
T60072 lung .a-u 2090 to 2465 381 to 7       375/381
(98 %)
0 diff
(100 %id)
AA972837 pooled .a-u 2118 to 2458 340 to 1       340/340
(100 %)
3 diff
(99.2 %id)
AI023222   .a-u 2177 to 2459 285 to 4       282/285
(98 %)
0 diff
(100 %id)
DB338578.
matches multiple genes
testis .a-u 2271 to 2458 188 to 1     also hits gene tokora 188/194
(96 %)
2 diff
(99.0 %id)
DB514135 testis .a-u 2277 to 2457 1 to 183     Submitted on the opposite strand 183/183
(100 %)
8 diff
(95.7 %id)
AK057255 testis Gene UBQLNL, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes C