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Gene C1orf94TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
53 supporting clones for gene C1orf94 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF979270 testis .a 1 to 693 1 to 681   tiling clone,   681/735
(92 %)
18 diff
(97.6 %id)
DB450633 testis .a 9 to 450 1 to 442   tiling clone,   442/442
(100 %)
11 diff
(97.6 %id)
DB447925 testis .a 46 to 463 1 to 418       418/421
(99 %)
6 diff
(98.6 %id)
DB443200 testis .a 58 to 413 1 to 357       357/431
(82 %)
8 diff
(98.2 %id)
DB443960 testis .a 63 to 517 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
DB456109 testis .a 87 to 576 1 to 490   tiling clone,   490/490
(100 %)
0 diff
(100 %id)
NM_001134734.1   .a 87 to 3091 1 to 3005 exact RefSeq,   3005/3005
(100 %)
0 diff
(100 %id)
CD558080 testis .a 518 to 1244 28 to 756   tiling clone,   729/940
(77 %)
9 diff
(99.1 %id)
BI831186 brain, medulla .a 692 to 729 652 to 691       590/697
(84 %)
17 diff
(97.6 %id)
TI_57177051   .a 692 to 729 681 to 720       591/726
(81 %)
11 diff
(98.5 %id)
BC064845 testis .a 805 to 3088 1 to 2284 exact tiling clone, available from MGC, AAA   2284/2284
(100 %)
3 diff
(99.9 %id)
CD359022 testis .a 806 to 1566 1 to 770       770/925
(83 %)
17 diff
(98.2 %id)
BF979801 testis .a 2456 to 3022 576 to 12       565/576
(98 %)
0 diff
(100 %id)
AK123355 caudate nucleus .b 1 to 2132 2 to 2127   tiling clone, available from FLJ,   2127/2127
(100 %)
6 diff
(99.8 %id)
DA253028 caudate nucleus .b 1 to 585 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
CN366753 embryonic stem cells, cell lines H1, H7, andH9 .b 116 to 426 45 to 355       311/355
(87 %)
6 diff
(98.4 %id)
NM_032884.3   .b 140 to 2135 1 to 1996   RefSeq,   1996/1996
(100 %)
0 diff
(100 %id)
DA714248   .b 141 to 689 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DA730034   .b 214 to 1023 2 to 815   capped   814/816
(99 %)
17 diff
(98.0 %id)
BC007637 Muscle, rhabdomyosarcoma .b 232 to 2132 1 to 1895 Q45E D112E available from MGC, AAA   1895/1895
(100 %)
7 diff
(99.7 %id)
BE300123 muscle, rhabdomyosarcoma .b 251 to 1114 1 to 863       863/912
(94 %)
28 diff
(97.0 %id)
BE296587 muscle, rhabdomyosarcoma .b 251 to 889 1 to 648       648/648
(100 %)
18 diff
(97.3 %id)
TI_1948077606   .b 530 to 1411 119 to 1002       884/1148
(77 %)
41 diff
(96.5 %id)
TI_1948077607   .b 530 to 1420 122 to 1008       887/1319
(67 %)
20 diff
(98.5 %id)
TI_1948077927   .b 530 to 1420 122 to 1023       902/1172
(76 %)
47 diff
(96.0 %id)
TI_1948077928   .b 530 to 1650 119 to 1224       1106/1342
(82 %)
56 diff
(95.9 %id)
TI_1948078248   .b 530 to 1385 124 to 971       848/1160
(73 %)
30 diff
(97.5 %id)
TI_1948078249   .b 530 to 1421 122 to 1016       895/1390
(64 %)
19 diff
(98.7 %id)
TI_1948230331   .b 530 to 1269 122 to 867   fully sequenced,   746/867
(86 %)
6 diff
(99.4 %id)
TI_1948230500   .b 530 to 1123 124 to 716   fully sequenced,   593/716
(82 %)
6 diff
(99.2 %id)
TI_1948230664   .b 530 to 1123 122 to 714   fully sequenced,   593/714
(83 %)
6 diff
(99.2 %id)
TI_1948230830   .b 530 to 1269 128 to 869   fully sequenced,   742/869
(85 %)
8 diff
(99.1 %id)
CV027132 mixed .b 539 to 1152 1 to 612       612/612
(100 %)
5 diff
(99.2 %id)
EL737007 mixed .b 539 to 1150 1 to 612       612/612
(100 %)
0 diff
(100 %id)
TI_1948077929   .b 669 to 1764 1212 to 128       1085/1302
(83 %)
42 diff
(96.8 %id)
TI_1948077608   .b 704 to 1764 1185 to 126       1060/1310
(80 %)
40 diff
(97.0 %id)
TI_1948078250   .b 751 to 1764 1137 to 128       1010/1292
(78 %)
36 diff
(97.3 %id)
TI_1948077609   .b 980 to 1764 918 to 131       788/1235
(63 %)
8 diff
(99.4 %id)
BX097703 pooled .b 1022 to 1755 1 to 733       733/733
(100 %)
1 diff
(99.9 %id)
TI_1948077930   .b 1083 to 1764 814 to 132       683/1223
(55 %)
8 diff
(99.4 %id)
TI_1948230501   .b 1093 to 1764 800 to 130   fully sequenced,   671/800
(83 %)
0 diff
(100 %id)
TI_1948230665   .b 1093 to 1764 801 to 130   fully sequenced,   672/801
(83 %)
0 diff
(100 %id)
TI_1948078251   .b 1099 to 1764 795 to 131       665/1188
(55 %)
29 diff
(97.6 %id)
TI_1948230332   .b 1208 to 1764 690 to 134   fully sequenced,   557/690
(80 %)
0 diff
(100 %id)
TI_1948230831   .b 1208 to 1764 684 to 130   fully sequenced,   555/684
(81 %)
1 diff
(99.9 %id)
AA725646   .b 1584 to 2135 552 to 1   tiling clone,   552/552
(100 %)
0 diff
(100 %id)
DB306432 caudate nucleus .b 1585 to 2132 542 to 1       542/542
(100 %)
6 diff
(98.9 %id)
AA913614 pooled .b 1605 to 2135 528 to 1       528/528
(100 %)
26 diff
(95.1 %id)
DB517349 testis .b 1645 to 2132 1 to 482     Submitted on the opposite strand 482/482
(100 %)
5 diff
(99.0 %id)
AA758238   .b 1649 to 2135 487 to 1       487/487
(100 %)
1 diff
(99.8 %id)
DB521518 testis .b 1658 to 2130 1 to 467     Submitted on the opposite strand 467/469
(99 %)
9 diff
(98.1 %id)
DB516091 testis .b 1687 to 2132 1 to 439     Submitted on the opposite strand 439/439
(100 %)
8 diff
(98.2 %id)
DB508888 testis .b 1689 to 2132 7 to 458     Submitted on the opposite strand 452/458
(98 %)
6 diff
(98.7 %id)
AI798078 pooled .b 1689 to 2135 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AW241777 pooled .b 1733 to 2134 397 to 1       397/397
(100 %)
8 diff
(98.0 %id)
AA953860 pooled .b 1764 to 2135 366 to 1       366/366
(100 %)
5 diff
(98.7 %id)
AW117410 pooled .b 1792 to 2135 344 to 1       344/344
(100 %)
0 diff
(100 %id)
AA994338 pooled .b 1844 to 2135 292 to 1       292/292
(100 %)
2 diff
(99.4 %id)
AA907373 pooled .b 1915 to 2111 191 to 1       191/191
(100 %)
4 diff
(98.0 %id)
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI