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Gene CCDC104TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
368 supporting clones for gene CCDC104 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
Z45411 brain, total brain .a 1 to 318 1 to 318   tiling clone, to resequence,   318/318
(100 %)
0 diff
(100 %id)
R21129 whole brain .a 2 to 447 1 to 457   tiling clone,   457/463
(98 %)
13 diff
(97.2 %id)
R46725 whole brain .a 1507 to 1911 426 to 9   tiling clone,   418/426
(98 %)
14 diff
(96.8 %id)
Z41123 brain, total brain .a 1627 to 1910 284 to 1   to resequence,   284/284
(100 %)
0 diff
(100 %id)
DA043341 bladder .b 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
2 diff
(99.7 %id)
DA044528 bladder .b 1 to 561 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
CD109034 brain, Pituitary .b 51 to 725 1 to 680   tiling clone, AAA   680/867
(78 %)
9 diff
(99.0 %id)
CN293939 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 106 to 609 1 to 504       504/504
(100 %)
1 diff
(99.9 %id)
CN275844 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 339 to 958 1 to 620   tiling clone,   620/620
(100 %)
2 diff
(99.7 %id)
AW517463 cervix .b 391 to 845 1 to 455     Submitted on the opposite strand 455/455
(100 %)
4 diff
(99.2 %id)
R11083.
matches multiple genes
liver and spleen .b 508 to 912 1 to 410     also hits gene RAB3GAP1 410/428
(95 %)
9 diff
(97.9 %id)
AW292652   .b 882 to 1175 13 to 306   tiling clone, Submitted on the opposite strand 294/306
(96 %)
6 diff
(98.1 %id)
BE218230 carcinoid, lung .b 896 to 1425 1 to 530     Submitted on the opposite strand 530/530
(100 %)
4 diff
(99.3 %id)
BE218291 carcinoid, lung .b 896 to 1414 1 to 519     Submitted on the opposite strand 519/519
(100 %)
3 diff
(99.5 %id)
FN168153 breast carcinoma .b 902 to 1014 1 to 117       117/117
(100 %)
4 diff
(96.6 %id)
W68827 heart .b 1011 to 1279 1 to 269   tiling clone, fully sequenced,   269/269
(100 %)
4 diff
(98.6 %id)
AA053722 eye, retina .b 1116 to 1777 650 to 1   tiling clone, Submitted on the opposite strand 650/660
(98 %)
19 diff
(97.2 %id)
AA694205 liver and spleen .b 1217 to 1800 583 to 1       583/583
(100 %)
3 diff
(99.5 %id)
W68735 heart .b 1249 to 1796 581 to 1   fully sequenced,   581/581
(100 %)
24 diff
(95.9 %id)
DB296064 bladder .b 1265 to 1800 537 to 1       537/537
(100 %)
3 diff
(99.5 %id)
AI125867   .b 1305 to 1822 529 to 12   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 518/529
(97 %)
0 diff
(100 %id)
AI925527 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 1325 to 1813 493 to 5   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 489/493
(99 %)
0 diff
(100 %id)
AA775581 heart .b 1356 to 1800 444 to 1       444/444
(100 %)
2 diff
(99.6 %id)
BX105938 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 1363 to 1813 452 to 2   AAA Submitted on the opposite strand 451/452
(99 %)
0 diff
(100 %id)
AA682642 liver and spleen .b 1367 to 1794 421 to 1       421/421
(100 %)
8 diff
(98.1 %id)
AW192984 adenocarcinoma, Pancreas .b 1369 to 1804 436 to 1       436/436
(100 %)
0 diff
(100 %id)
R11035 liver and spleen .b 1426 to 1793 376 to 1       376/376
(100 %)
9 diff
(97.7 %id)
AW903837 nervous_normal .b 1548 to 1808 14 to 274       261/274
(95 %)
6 diff
(97.9 %id)
AW903906 nervous_normal .b 1550 to 1839 14 to 302   tiling clone,   289/304
(95 %)
10 diff
(96.8 %id)
BM686695 eye, optic nerve .b 1829 to 2382 1 to 553   tiling clone, to resequence,   553/553
(100 %)
5 diff
(99.1 %id)
BU728052 eye, optic nerve .b 3262 to 3613 370 to 19   tiling clone, to resequence, AAA   352/352
(100 %)
0 diff
(100 %id)
AY358097   .c 1 to 1373 1 to 1373 D268G tiling clone,   1373/1373
(100 %)
2 diff
(99.9 %id)
BF183863 bone marrow, from chronic myelogenous leukemia .d 1 to 642 1 to 633   tiling clone,   633/908
(69 %)
18 diff
(98.1 %id)
DB448836 testis .d 37 to 464 1 to 427       427/427
(100 %)
1 diff
(99.8 %id)
TI_159695089   .d 38 to 883 63 to 898     Submitted on the opposite strand 836/1040
(80 %)
23 diff
(97.8 %id)
NM_080667.5   .d 46 to 1344 1 to 1299 exact RefSeq, AAA   1299/1299
(100 %)
0 diff
(100 %id)
BM550589 melanotic melanoma, skin .d 49 to 1024 10 to 991   tiling clone,   982/1100
(89 %)
22 diff
(98.0 %id)
AA315267 colon .d 54 to 263 1 to 210       210/210
(100 %)
0 diff
(100 %id)
DB449946 testis .d 61 to 518 1 to 458       458/458
(100 %)
19 diff
(95.9 %id)
BI666548 brain, hypothalamus .d 64 to 883 1 to 818       816/888
(91 %)
28 diff
(96.9 %id)
DB448887 testis .d 66 to 497 1 to 432       432/432
(100 %)
0 diff
(100 %id)
TI_44342739   .d 69 to 883 91 to 903       811/973
(83 %)
27 diff
(97.3 %id)
BP330871 rectum .d 88 to 668 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BI459191 testis .d 90 to 728 1 to 641       641/781
(82 %)
11 diff
(98.6 %id)
BU598148 mixed (pool of 40 RNAs) .d 90 to 726 1 to 644       644/850
(75 %)
15 diff
(98.3 %id)
BU567366 testis .d 90 to 634 1 to 550       550/752
(73 %)
14 diff
(98.2 %id)
BU568145 testis .d 90 to 853 1 to 772       772/784
(98 %)
20 diff
(97.5 %id)
BP214090 cerebrum .d 93 to 670 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BG719130 testis .d 93 to 848 1 to 755       755/755
(100 %)
7 diff
(99.1 %id)
BI552245 brain, hippocampus .d 93 to 884 7 to 809       803/888
(90 %)
37 diff
(95.9 %id)
BP368977 testis .d 93 to 665 1 to 573       573/573
(100 %)
0 diff
(100 %id)
BG527554 lung, mucoepidermoid carcinoma .d 94 to 883 1 to 791       743/866
(85 %)
23 diff
(97.4 %id)
BG714369 brain, hypothalamus .d 94 to 748 1 to 655       655/655
(100 %)
5 diff
(99.3 %id)
BG706891 brain, hypothalamus .d 94 to 860 1 to 770       770/770
(100 %)
11 diff
(98.6 %id)
DB447884 testis .d 95 to 529 1 to 435       435/435
(100 %)
0 diff
(100 %id)
BQ271443 Pancreas, Purified pancreatic islet .d 99 to 698 1 to 600       600/600
(100 %)
3 diff
(99.5 %id)
DB450040 testis .d 101 to 572 1 to 470       470/473
(99 %)
19 diff
(96.0 %id)
DB460611 testis .d 101 to 577 1 to 477       477/477
(100 %)
0 diff
(100 %id)
BG537786 lung .d 105 to 846 1 to 748       675/749
(90 %)
38 diff
(95.0 %id)
DB448579 testis .d 106 to 525 1 to 420       420/420
(100 %)
0 diff
(100 %id)
BE731701 choriocarcinoma, placenta .d 106 to 579 1 to 469       469/469
(100 %)
5 diff
(99.0 %id)
BG474143 eye, retinoblastoma .d 106 to 486 1 to 383       383/383
(100 %)
7 diff
(98.2 %id)
BC001797 Eye, retinoblastoma .d 107 to 1343 1 to 1237 D243G AAA   1237/2931
(42 %)
2 diff
(100.0 %id)
BI919197 brain .d 107 to 780 1 to 679       679/753
(90 %)
16 diff
(97.9 %id)
TI_57239435   .d 107 to 780 1 to 679       679/753
(90 %)
16 diff
(97.9 %id)
BQ957092 large cell carcinoma, lung .d 108 to 1020 1 to 920       920/925
(99 %)
21 diff
(97.8 %id)
BF245390 brain, glioblastoma .d 109 to 185 1 to 77       77/77
(100 %)
1 diff
(98.8 %id)
CN368428 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 110 to 733 12 to 635       624/635
(98 %)
6 diff
(99.1 %id)
BQ672324 epidermoid carcinoma, cell line, salivary gland .d 113 to 726 1 to 615       615/961
(63 %)
5 diff
(99.5 %id)
AA319408 adrenal gland .d 115 to 358 1 to 244       244/249
(97 %)
3 diff
(98.8 %id)
BF382922 brain, primitive neuroectoderm .d 115 to 642 1 to 527       527/707
(74 %)
14 diff
(98.1 %id)
BF665189 brain, primitive neuroectoderm .d 115 to 677 1 to 566       566/566
(100 %)
21 diff
(96.3 %id)
BF790608 muscle (skeletal) .d 115 to 782 1 to 661       660/829
(79 %)
26 diff
(96.9 %id)
BQ953586 epidermoid carcinoma, cell line, lung .d 115 to 879 1 to 769       769/857
(89 %)
7 diff
(99.2 %id)
DT217922 brain .d 116 to 713 1 to 598       598/598
(100 %)
1 diff
(99.9 %id)
BP246105 Kidney .d 116 to 694 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DA759014   .d 117 to 610 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
CA391118 eye, RPE/choroid .d 119 to 616 1 to 498       498/498
(100 %)
0 diff
(100 %id)
DB447793 testis .d 120 to 563 1 to 442       442/442
(100 %)
6 diff
(98.7 %id)
BF681127 Prostate .d 120 to 728 1 to 607       607/688
(88 %)
17 diff
(97.6 %id)
CD689389 normal nasopharynx .d 122 to 337 1 to 216       216/216
(100 %)
2 diff
(99.1 %id)
DB494515 hypothalamus .d 122 to 627 1 to 506       506/515
(98 %)
2 diff
(99.7 %id)
BG539842 lung .d 123 to 724 1 to 604       604/729
(82 %)
6 diff
(99.2 %id)
BI560850 testis .d 123 to 874 1 to 750       748/755
(99 %)
9 diff
(98.9 %id)
DB449012 testis .d 124 to 563 1 to 440       440/440
(100 %)
1 diff
(99.8 %id)
BE256043 eye, retinoblastoma .d 125 to 778 1 to 654       654/699
(93 %)
8 diff
(98.9 %id)
BF700947 brain, primitive neuroectoderm .d 126 to 780 1 to 651       649/724
(89 %)
39 diff
(94.7 %id)
DB449660 testis .d 127 to 583 1 to 458       458/458
(100 %)
6 diff
(98.7 %id)
TI_44349086   .d 128 to 874 85 to 829       743/834
(89 %)
13 diff
(98.5 %id)
BF664361 B-cells, primary B-cells from tonsils (cell line) .d 129 to 526 1 to 394       394/398
(98 %)
10 diff
(97.5 %id)
BC010011 Primary B-Cells from Tonsils .d 130 to 1342 1 to 1213 D243G I246F available from MGC, AAA   1213/1213
(100 %)
2 diff
(99.9 %id)
DN990473 brain, whole brain .d 130 to 715 8 to 593       586/593
(98 %)
6 diff
(99.0 %id)
BU552564 carcinoma, cell line, Prostate .d 131 to 973 1 to 851       851/928
(91 %)
15 diff
(98.4 %id)
BE566402 bladder, carcinoma, cell line .d 134 to 862 1 to 708       649/716
(90 %)
59 diff
(91.8 %id)
BI831005 brain, medulla .d 141 to 961 1 to 820       820/822
(99 %)
6 diff
(99.3 %id)
CK825507 Pancreas, Purified pancreatic islet .d 141 to 744 1 to 604     Submitted on the opposite strand 604/604
(100 %)
0 diff
(100 %id)
TI_57177233   .d 141 to 961 65 to 884       820/886
(92 %)
12 diff
(98.7 %id)
BF218701 brain, glioblastoma .d 142 to 778 1 to 658       633/734
(86 %)
38 diff
(94.9 %id)
AL702035 human skeletal muscle .d 146 to 682 1 to 537       537/537
(100 %)
5 diff
(99.1 %id)
AL702154 human skeletal muscle .d 146 to 681 1 to 536       536/536
(100 %)
5 diff
(99.1 %id)
AL702155 human skeletal muscle .d 146 to 725 1 to 580       580/580
(100 %)
3 diff
(99.5 %id)
BQ433273 large cell carcinoma, lung .d 146 to 1033 1 to 893       893/893
(100 %)
12 diff
(98.7 %id)
CN368427 embryonic stem cells, DMSO-treated H9 cellline .d 147 to 724 1 to 578       578/578
(100 %)
0 diff
(100 %id)
CN368426 embryonic stem cells, cell lines H1, H7, andH9 .d 148 to 763 1 to 616       616/616
(100 %)
0 diff
(100 %id)
BE547429 cervical carcinoma cell line, cervix .d 156 to 871 1 to 713       711/715
(99 %)
39 diff
(94.6 %id)
CK002920 brain/CNS, Human Brain - Cerebellar Cortex .d 157 to 760 1 to 603       603/637
(94 %)
6 diff
(99.1 %id)
BF171940 blood .d 158 to 479 1 to 325       325/325
(100 %)
18 diff
(94.5 %id)
BF973298 leiomyosarcoma cell line, uterus .d 160 to 953 1 to 788       788/945
(83 %)
31 diff
(96.8 %id)
DB487337 hypothalamus .d 171 to 617 1 to 447       447/447
(100 %)
2 diff
(99.6 %id)
DB489843 hypothalamus .d 171 to 621 1 to 447       447/447
(100 %)
12 diff
(97.4 %id)
BQ716548 sympathetic trunk .d 171 to 998 1 to 843       843/895
(94 %)
26 diff
(97.1 %id)
BI603780 brain, hypothalamus .d 172 to 968 7 to 800       794/803
(98 %)
14 diff
(98.3 %id)
TI_45210298   .d 172 to 968 93 to 886       794/889
(89 %)
14 diff
(98.5 %id)
BI850503 breast, mammary adenocarcinoma, cell line .d 173 to 789 1 to 618       618/618
(100 %)
5 diff
(99.2 %id)
BP311860 brain .d 175 to 751 1 to 577       577/582
(99 %)
4 diff
(99.4 %id)
BM045339 carcinoma, cell line, Prostate .d 178 to 1014 1 to 837       837/837
(100 %)
18 diff
(97.9 %id)
BE258339 eye, retinoblastoma .d 179 to 851 1 to 669       669/684
(97 %)
12 diff
(98.3 %id)
DN989838 brain, whole brain .d 179 to 848 9 to 678       670/678
(98 %)
6 diff
(99.2 %id)
AA310475   .d 190 to 502 1 to 314       314/314
(100 %)
3 diff
(99.1 %id)
BE885557 leiomyosarcoma, uterus .d 191 to 728 1 to 544       544/958
(56 %)
6 diff
(99.4 %id)
BG897381 cartilage .d 219 to 576 52 to 409       358/412
(86 %)
15 diff
(96.4 %id)
BF820085 kidney_tumor .d 231 to 574 357 to 18     Submitted on the opposite strand 340/369
(92 %)
1 diff
(99.8 %id)
BQ437987 melanotic melanoma, skin .d 237 to 685 1 to 454       454/1056
(42 %)
16 diff
(98.5 %id)
TI_1948122097   .d 241 to 811 122 to 692   fully sequenced,   571/692
(82 %)
6 diff
(99.2 %id)
TI_1948122266   .d 241 to 811 127 to 697   fully sequenced,   571/697
(81 %)
6 diff
(99.2 %id)
TI_1948122446   .d 241 to 671 126 to 556   fully sequenced,   431/556
(77 %)
6 diff
(99.0 %id)
TI_1948122615   .d 241 to 811 126 to 696   fully sequenced,   571/696
(82 %)
6 diff
(99.2 %id)
CV028317 mixed .d 244 to 883 1 to 640       640/659
(97 %)
2 diff
(99.7 %id)
BE884883 leiomyosarcoma, uterus .d 245 to 881 1 to 636       634/906
(69 %)
8 diff
(99.2 %id)
FN051526 breast carcinoma .d 282 to 347 1 to 66       66/67
(98 %)
1 diff
(98.6 %id)
EL955589 eyeball .d 285 to 750 1 to 465       465/465
(100 %)
5 diff
(99.0 %id)
AW170378 cervix, tumor .d 296 to 358 72 to 10       63/72
(87 %)
0 diff
(100 %id)
AI536833 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 313 to 754 442 to 1       442/442
(100 %)
0 diff
(100 %id)
BQ876933 epidermoid carcinoma, cell line, lung .d 316 to 1017 1 to 711       651/933
(69 %)
35 diff
(96.3 %id)
AA319470 adrenal gland .d 339 to 642 1 to 305       305/312
(97 %)
3 diff
(99.1 %id)
AA278518 germinal center B cell .d 346 to 583 1 to 238       238/238
(100 %)
0 diff
(100 %id)
CN368429 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 348 to 540 1 to 193       193/193
(100 %)
0 diff
(100 %id)
BM789335 Ascites, stomach .d 362 to 926 1 to 565       565/565
(100 %)
0 diff
(100 %id)
AW952155   .d 365 to 725 1 to 362       362/362
(100 %)
14 diff
(96.2 %id)
TI_154103225   .d 378 to 1342 1042 to 83   AAA   960/1004
(95 %)
18 diff
(98.3 %id)
W20004 parathyroid gland, parathyroid tumor .d 395 to 726 1 to 335       335/335
(100 %)
4 diff
(98.9 %id)
BG927452 cartilage .d 401 to 946 82 to 626       545/558
(97 %)
6 diff
(99.0 %id)
CR612291 neuroblastoma .d 424 to 1337 1 to 914       914/914
(100 %)
0 diff
(100 %id)
AL518311 brain, neuroblastoma, neuroblastoma cells .d 424 to 1337 1 to 914       914/914
(100 %)
5 diff
(99.5 %id)
BE543491 cervical carcinoma cell line, cervix .d 424 to 1107 14 to 705       692/705
(98 %)
29 diff
(95.9 %id)
TI_149302882   .d 429 to 1336 961 to 64   AAA   898/966
(92 %)
18 diff
(98.2 %id)
TI_149287670   .d 430 to 1342 968 to 63   AAA   906/1164
(77 %)
36 diff
(97.0 %id)
BE160438 head_neck .d 444 to 805 11 to 372       362/372
(97 %)
8 diff
(97.9 %id)
AA418173 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 446 to 902 1 to 457       457/457
(100 %)
1 diff
(99.8 %id)
AW819816 stomach .d 447 to 1007 1 to 557       557/557
(100 %)
6 diff
(99.0 %id)
AW819897 stomach .d 460 to 890 1 to 430       430/430
(100 %)
3 diff
(99.4 %id)
AW819823 stomach .d 462 to 850 1 to 389       389/389
(100 %)
4 diff
(99.0 %id)
AA491655 Ewing's sarcoma .d 467 to 869 1 to 403       403/403
(100 %)
5 diff
(98.8 %id)
BM924030 pooled colon, kidney, stomach .d 480 to 1342 1 to 864       864/868
(99 %)
3 diff
(99.7 %id)
BG995108 head_neck .d 494 to 860 8 to 374       367/374
(98 %)
13 diff
(96.6 %id)
BG995473 head_neck .d 494 to 884 398 to 10       390/419
(93 %)
1 diff
(99.8 %id)
BG949248 breast .d 498 to 703 1 to 204       204/204
(100 %)
2 diff
(99.1 %id)
AI904985 breast .d 506 to 824 1 to 317       317/317
(100 %)
5 diff
(98.5 %id)
AW820062 stomach .d 521 to 752 229 to 1       229/235
(97 %)
2 diff
(99.2 %id)
BF747913 breast .d 521 to 760 8 to 244       237/244
(97 %)
6 diff
(97.6 %id)
FN133653 breast carcinoma .d 521 to 607 10 to 95       86/95
(90 %)
6 diff
(93.7 %id)
TI_149292039   .d 521 to 1336 872 to 61   AAA   812/916
(88 %)
14 diff
(98.5 %id)
TI_149299654   .d 521 to 1342 899 to 83   AAA   817/935
(87 %)
15 diff
(98.4 %id)
TI_149311117   .d 521 to 1336 903 to 94   AAA   810/952
(85 %)
19 diff
(98.1 %id)
TI_154129232   .d 521 to 1342 909 to 88   AAA   822/991
(82 %)
13 diff
(98.7 %id)
TI_149305411   .d 550 to 1338 875 to 90   AAA   786/956
(82 %)
11 diff
(98.9 %id)
TI_154097081   .d 568 to 1342 854 to 85   AAA   770/794
(96 %)
29 diff
(96.4 %id)
BM980999 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 579 to 1336 776 to 19   AAA   758/758
(100 %)
1 diff
(99.9 %id)
BU608821 Human Lung Epithelial cells, lung .d 583 to 1344 772 to 17   AAA   756/758
(99 %)
8 diff
(99.0 %id)
CD677659 eye, Trabecular meshwork .d 589 to 1210 1 to 621       621/621
(100 %)
2 diff
(99.7 %id)
AW373506 breast .d 593 to 1120 527 to 1       527/527
(100 %)
9 diff
(98.3 %id)
BM974256 lung .d 599 to 1336 756 to 19   AAA   738/738
(100 %)
1 diff
(99.9 %id)
CK724901 Chondrosarcoma, Left Pubic Bone .d 599 to 1342 762 to 19   AAA   744/744
(100 %)
6 diff
(99.2 %id)
BU685766 lung, Primary Lung Epithelial Cells .d 600 to 1338 753 to 17   AAA   737/737
(100 %)
3 diff
(99.6 %id)
BQ771768 Chondrosarcoma Grade II, Left Pelvis .d 602 to 1342 759 to 19   AAA   741/741
(100 %)
1 diff
(99.9 %id)
CA425753 cell lines, Chondrosarcoma .d 603 to 1342 758 to 19   AAA   740/740
(100 %)
2 diff
(99.8 %id)
TI_1948122447   .d 610 to 1271 785 to 125   fully sequenced,   661/785
(84 %)
2 diff
(99.8 %id)
CR993575 T-Lymphocytes .d 641 to 1167 1 to 526       526/528
(99 %)
4 diff
(99.3 %id)
AA120834 uterus .d 649 to 1013 1 to 373     Submitted on the opposite strand 373/388
(96 %)
10 diff
(97.5 %id)
AA120877 uterus .d 649 to 1027 1 to 380     Submitted on the opposite strand 380/405
(93 %)
8 diff
(98.1 %id)
AW819894 stomach .d 708 to 1165 456 to 1       456/456
(100 %)
2 diff
(99.6 %id)
N39821 melanocyte .d 727 to 1171 1 to 448       448/498
(89 %)
9 diff
(98.2 %id)
BM972955 lung .d 727 to 1342 634 to 19   AAA   616/623
(98 %)
1 diff
(99.9 %id)
BU675425 lung, Primary Lung Epithelial Cells .d 729 to 1342 633 to 19   AAA   615/615
(100 %)
1 diff
(99.9 %id)
CA423342 cell lines, Chondrosarcoma .d 729 to 1342 633 to 19   AAA   615/615
(100 %)
1 diff
(99.9 %id)
AA025333 heart .d 746 to 1108 1 to 363   fully sequenced,   363/363
(100 %)
2 diff
(99.5 %id)
TI_1948122098   .d 750 to 1271 647 to 126   fully sequenced,   522/647
(80 %)
2 diff
(99.7 %id)
TI_1948122267   .d 750 to 1271 646 to 125   fully sequenced,   522/646
(80 %)
2 diff
(99.7 %id)
TI_1948122616   .d 750 to 1271 646 to 125   fully sequenced,   522/646
(80 %)
2 diff
(99.7 %id)
BM993564 lung, Metastatic Chondrosarcoma .d 756 to 1344 606 to 17   tiling clone, AAA   590/590
(100 %)
1 diff
(99.9 %id)
AV722612 hypothalamus .d 760 to 1348 1 to 589       589/604
(97 %)
11 diff
(98.2 %id)
FN147148 breast carcinoma .d 763 to 868 1 to 105       105/105
(100 %)
1 diff
(99.1 %id)
BM692696 eye, Retina Foveal and Macular .d 764 to 1342 1 to 579   AAA   579/579
(100 %)
0 diff
(100 %id)
BM693188 eye, Retina Foveal and Macular .d 764 to 914 1 to 151   fully sequenced,   151/151
(100 %)
0 diff
(100 %id)
AA032189 heart .d 765 to 986 1 to 224     Submitted on the opposite strand 224/224
(100 %)
3 diff
(98.7 %id)
BQ271146 Pancreas, Purified pancreatic islet .d 776 to 1343 569 to 2       568/569
(99 %)
2 diff
(99.7 %id)
CA314115 Human Lung Epithelial cells, lung .d 787 to 1342 574 to 19   AAA   556/566
(98 %)
1 diff
(99.9 %id)
CA310562 Human Lung Epithelial cells, lung .d 787 to 1342 574 to 19   AAA   556/565
(98 %)
1 diff
(99.9 %id)
AI990324 pooled germ cell tumors .d 797 to 1336 540 to 1       540/540
(100 %)
0 diff
(100 %id)
AW296193   .d 801 to 1336 553 to 18   AAA   536/536
(100 %)
2 diff
(99.7 %id)
BG054663 Kidney .d 802 to 1343 549 to 7       543/549
(98 %)
2 diff
(99.7 %id)
AI767277 Kidney .d 809 to 1342 535 to 1       535/535
(100 %)
5 diff
(99.1 %id)
DW417687 Liver .d 813 to 1101 17 to 305       289/305
(94 %)
7 diff
(97.8 %id)
AI628716 Kidney .d 819 to 1342 524 to 1       524/524
(100 %)
1 diff
(99.9 %id)
BE465266 Kidney .d 825 to 1337 515 to 3       513/515
(99 %)
1 diff
(99.9 %id)
BI481186 Native Retinal Pigment Epithelium sheets, retina .d 828 to 1336 12 to 520   AAA   509/520
(97 %)
3 diff
(99.5 %id)
BE707947 head_neck .d 831 to 962 1 to 132       132/142
(92 %)
3 diff
(97.9 %id)
AI949851 2 pooled tumors (clear cell type), Kidney .d 831 to 1336 516 to 11   AAA   506/508
(99 %)
2 diff
(99.7 %id)
AW052027 Kidney .d 841 to 1342 502 to 1       502/502
(100 %)
2 diff
(99.7 %id)
BG150256 pooled germ cell tumors .d 844 to 1342 499 to 1       499/499
(100 %)
2 diff
(99.6 %id)
AI393310 B-cell, chronic lymphotic leukemia .d 849 to 1341 493 to 1       493/493
(100 %)
2 diff
(99.6 %id)
AI672533 pooled germ cell tumors .d 849 to 1336 488 to 1       488/488
(100 %)
3 diff
(99.4 %id)
AW089575 ovary, tumor, 5 pooled (see description) .d 849 to 1343 497 to 3       495/497
(99 %)
1 diff
(99.8 %id)
AW772609 Kidney .d 849 to 1337 493 to 5       489/493
(99 %)
1 diff
(99.8 %id)
BF195369 carcinoid, lung .d 849 to 1343 497 to 3       495/497
(99 %)
1 diff
(99.8 %id)
BF445311 Prostate .d 851 to 1343 496 to 4       493/497
(99 %)
5 diff
(99.0 %id)
AI632479 pooled germ cell tumors .d 852 to 1343 495 to 4       492/495
(99 %)
0 diff
(100 %id)
AI927044 Kidney .d 853 to 1342 488 to 1       488/488
(100 %)
4 diff
(99.2 %id)
BM668423 eye, Retina Foveal and Macular .d 853 to 1342 508 to 19   fully sequenced, AAA   490/490
(100 %)
0 diff
(100 %id)
AI377011   .d 861 to 1343 485 to 4       482/485
(99 %)
3 diff
(99.4 %id)
AW195020 Kidney .d 861 to 1343 486 to 8       479/486
(98 %)
11 diff
(97.8 %id)
BF589472 Prostate .d 862 to 1338 477 to 1       477/477
(100 %)
4 diff
(99.2 %id)
AA258052 germinal center B cell .d 865 to 1337 477 to 5       473/479
(98 %)
1 diff
(99.8 %id)
CA440624 Chondrosarcoma, Left Pubic Bone .d 869 to 1342 492 to 19   AAA   474/474
(100 %)
1 diff
(99.8 %id)
AI580845   .d 881 to 1343 465 to 3       463/473
(97 %)
1 diff
(99.8 %id)
AI634835 Kidney .d 881 to 1336 456 to 1       456/469
(97 %)
4 diff
(99.2 %id)
AI990403 pooled germ cell tumors .d 881 to 1336 456 to 1       456/457
(99 %)
1 diff
(99.8 %id)
BE047288 ovary, serous papillary tumor .d 881 to 1336 468 to 13   AAA   456/456
(100 %)
2 diff
(99.6 %id)
BE466459 Kidney .d 881 to 1336 456 to 1       456/466
(97 %)
1 diff
(99.8 %id)
CB178048 Pancreas, Purified pancreatic islet .d 881 to 1343 466 to 4       463/474
(97 %)
2 diff
(99.6 %id)
AI375394   .d 883 to 1342 470 to 11   AAA   460/460
(100 %)
3 diff
(99.4 %id)
AW294184   .d 884 to 1342 476 to 18   AAA   459/459
(100 %)
2 diff
(99.6 %id)
DB565568 hypothalamus .d 888 to 1335 1 to 448     Submitted on the opposite strand 448/449
(99 %)
3 diff
(99.4 %id)
AI276931 placenta .d 888 to 1343 459 to 4       456/459
(99 %)
3 diff
(99.4 %id)
AI380525 B-cell, chronic lymphotic leukemia .d 888 to 1341 454 to 1       454/454
(100 %)
4 diff
(99.2 %id)
AW014393   .d 888 to 1336 466 to 18   AAA   449/449
(100 %)
2 diff
(99.6 %id)
AI492977 Kidney .d 890 to 1343 459 to 6       454/459
(98 %)
4 diff
(99.2 %id)
AI206178 pooled germ cell tumors .d 892 to 1342 451 to 1       451/451
(100 %)
3 diff
(99.4 %id)
AI627366 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 892 to 1337 447 to 2       446/447
(99 %)
2 diff
(99.6 %id)
AW051596 Kidney .d 892 to 1343 453 to 2       452/453
(99 %)
1 diff
(99.8 %id)
AI277897 placenta .d 893 to 1344 457 to 6       452/457
(98 %)
2 diff
(99.6 %id)
N34552 melanocyte .d 899 to 1336 439 to 1       439/439
(100 %)
2 diff
(99.6 %id)
DB544906 hippocampus .d 900 to 1340 1 to 443     Submitted on the opposite strand 443/445
(99 %)
5 diff
(98.9 %id)
AI097131 brain, glioblastoma (pooled) .d 900 to 1343 447 to 4       444/447
(99 %)
3 diff
(99.4 %id)
AI092585 parathyroid gland, parathyroid tumor .d 901 to 1343 449 to 7       443/449
(98 %)
3 diff
(99.4 %id)
DB513051 testis .d 905 to 1334 1 to 432     Submitted on the opposite strand 432/432
(100 %)
2 diff
(99.6 %id)
BE220361 carcinoid, lung .d 905 to 1341 437 to 1       437/437
(100 %)
2 diff
(99.6 %id)
AI335094 2 pooled tumors (clear cell type), Kidney .d 906 to 1337 434 to 3       432/434
(99 %)
3 diff
(99.4 %id)
DB514842 testis .d 912 to 1338 1 to 427     Submitted on the opposite strand 427/427
(100 %)
7 diff
(98.4 %id)
AA854231 parathyroid gland, parathyroid tumor .d 916 to 1344 441 to 13   AAA   429/429
(100 %)
6 diff
(98.7 %id)
DB514008 testis .d 917 to 1334 1 to 413     Submitted on the opposite strand 413/413
(100 %)
11 diff
(97.4 %id)
AW130509 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 917 to 1342 426 to 1       426/426
(100 %)
6 diff
(98.6 %id)
DB515574 testis .d 919 to 1340 1 to 420     Submitted on the opposite strand 420/421
(99 %)
6 diff
(98.6 %id)
DB556685 hypothalamus .d 920 to 1342 1 to 423     Submitted on the opposite strand 423/423
(100 %)
5 diff
(98.9 %id)
AW118342 brain, tumor, 5 pooled (see description) .d 920 to 1336 418 to 1       418/418
(100 %)
1 diff
(99.8 %id)
AI087318 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 921 to 1342 422 to 1       422/422
(100 %)
2 diff
(99.6 %id)
AA813319   .d 922 to 1336 425 to 11   AAA   415/418
(99 %)
1 diff
(99.8 %id)
DB515340 testis .d 924 to 1337 1 to 413     Submitted on the opposite strand 413/422
(97 %)
2 diff
(99.6 %id)
DB512946 testis .d 931 to 1342 1 to 415     Submitted on the opposite strand 415/415
(100 %)
12 diff
(97.2 %id)
DB526015 testis .d 933 to 1340 1 to 408     Submitted on the opposite strand 408/410
(99 %)
1 diff
(99.8 %id)
BF197682 brain, glioblastoma (pooled) .d 938 to 1113 176 to 1       176/176
(100 %)
2 diff
(98.9 %id)
AA861304 parathyroid gland, parathyroid tumor .d 939 to 1343 412 to 8       405/412
(98 %)
1 diff
(99.8 %id)
AA417922.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 942 to 1343 407 to 6     also hits gene CREBL2 402/407
(98 %)
1 diff
(99.8 %id)
DB559592 hypothalamus .d 945 to 1342 1 to 399     Submitted on the opposite strand 399/399
(100 %)
11 diff
(97.3 %id)
AI978689 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 946 to 1342 412 to 16   AAA   397/397
(100 %)
8 diff
(98.0 %id)
AW386352 pnet .d 949 to 1245 24 to 317       294/328
(89 %)
7 diff
(97.9 %id)
AW386361 pnet .d 949 to 1245 21 to 315       295/326
(90 %)
7 diff
(97.9 %id)
AI708302 aorta .d 949 to 1343 399 to 5       395/399
(98 %)
7 diff
(98.3 %id)
BE502671 pooled germ cell tumors .d 950 to 1343 396 to 3       394/396
(99 %)
0 diff
(100 %id)
AI923857 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 954 to 1336 407 to 25   AAA   383/383
(100 %)
6 diff
(98.5 %id)
AW305367 brain, three pooled meningiomas .d 954 to 1337 385 to 2       384/385
(99 %)
1 diff
(99.8 %id)
BF477512 brain, glioblastoma (pooled) .d 954 to 1343 391 to 2       390/391
(99 %)
3 diff
(99.3 %id)
AW386364 pnet .d 955 to 1243 1 to 289       289/302
(95 %)
13 diff
(95.7 %id)
AI769952 2 pooled tumors (clear cell type), Kidney .d 957 to 1342 429 to 44   AAA   386/386
(100 %)
3 diff
(99.3 %id)
AA773314 lung, lung carcinoma .d 959 to 1341 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
AA938444 2 pooled tumors (clear cell type), Kidney .d 960 to 1342 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
W31594 parathyroid gland, parathyroid tumor .d 965 to 1338 378 to 1       378/381
(99 %)
7 diff
(98.2 %id)
AI242757 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 969 to 1342 374 to 1       374/374
(100 %)
2 diff
(99.5 %id)
AW022176 cochlea, ear .d 969 to 1342 1 to 374   AAA   374/374
(100 %)
4 diff
(99.0 %id)
AI244790 Kidney .d 973 to 1339 373 to 7       367/373
(98 %)
1 diff
(99.8 %id)
AA757066   .d 974 to 1337 368 to 5       364/368
(98 %)
0 diff
(100 %id)
AA456429   .d 976 to 1342 367 to 1       367/367
(100 %)
0 diff
(100 %id)
DB513695 testis .d 980 to 1342 1 to 371     Submitted on the opposite strand 371/373
(99 %)
17 diff
(95.5 %id)
AI287640 placenta .d 980 to 1344 370 to 6       365/377
(96 %)
0 diff
(100 %id)
AI022605 parathyroid gland, parathyroid tumor .d 981 to 1342 362 to 1       362/362
(100 %)
1 diff
(99.8 %id)
AI220895 placenta .d 983 to 1337 356 to 2       355/356
(99 %)
0 diff
(100 %id)
AI473913 Kidney .d 988 to 1336 349 to 1       349/349
(100 %)
0 diff
(100 %id)
BG055341 carcinoid, lung .d 990 to 1336 358 to 12   AAA   347/347
(100 %)
0 diff
(100 %id)
BM693493 eye, Retina Foveal and Macular .d 997 to 1201 1 to 205   fully sequenced,   205/205
(100 %)
0 diff
(100 %id)
AA582770 germ cell tumor .d 1010 to 1335 326 to 1       326/326
(100 %)
0 diff
(100 %id)
AA587822 normal prostate, Prostate .d 1011 to 1342 346 to 15   AAA   332/332
(100 %)
0 diff
(100 %id)
AA974458 2 pooled tumors (clear cell type), Kidney .d 1011 to 1343 335 to 3       333/335
(99 %)
0 diff
(100 %id)
FN105300 breast carcinoma .d 1060 to 1149 1 to 90       90/91
(98 %)
1 diff
(99.0 %id)
CF529739 placenta .d 1067 to 1336 288 to 19   AAA   270/270
(100 %)
0 diff
(100 %id)
FN076529 breast carcinoma .d 1069 to 1151 1 to 82       82/85
(96 %)
2 diff
(97.7 %id)
BF593348 Prostate .d 1070 to 1344 277 to 2       276/277
(99 %)
0 diff
(100 %id)
EB361856 eye, lens .d 1071 to 1328 258 to 1       258/258
(100 %)
1 diff
(99.7 %id)
AI278073 placenta .d 1071 to 1343 276 to 4       273/276
(98 %)
0 diff
(100 %id)
BF475359 Prostate .d 1071 to 1344 275 to 2       274/275
(99 %)
0 diff
(100 %id)
BF447151 Prostate .d 1071 to 1344 275 to 2       274/275
(99 %)
0 diff
(100 %id)
AW271044 ovary, papillary serous carcinoma .d 1075 to 1336 11 to 273   AAA Submitted on the opposite strand 263/273
(96 %)
11 diff
(96.0 %id)
AA024488 heart .d 1078 to 1338 262 to 1   fully sequenced,   262/262
(100 %)
1 diff
(99.7 %id)
BF718587 epidermis, skin .d 1083 to 1335 254 to 2       253/254
(99 %)
1 diff
(99.7 %id)
BF718593 epidermis, skin .d 1083 to 1335 254 to 2       253/254
(99 %)
0 diff
(100 %id)
CR741896 multiple sclerosis lesions .d 1104 to 1324 220 to 1     Submitted on the opposite strand 220/249
(88 %)
5 diff
(98.0 %id)
N41064 multiple sclerosis lesions .d 1104 to 1293 19 to 207     Submitted on the opposite strand 189/207
(91 %)
5 diff
(97.6 %id)
BM310018 insulinoma, Pancreas .d 1107 to 1336 25 to 254   AAA   230/259
(88 %)
12 diff
(95.4 %id)
BM310292 insulinoma, Pancreas .d 1107 to 1332 254 to 29       226/277
(81 %)
1 diff
(99.7 %id)
BU070095 insulinoma, Pancreas .d 1107 to 1336 25 to 254   fully sequenced, AAA   230/254
(90 %)
13 diff
(94.9 %id)
BU787777 insulinoma, Pancreas .d 1107 to 1336 25 to 254   fully sequenced, AAA   230/254
(90 %)
12 diff
(95.3 %id)
BU789786 insulinoma, Pancreas .d 1107 to 1336 25 to 254   fully sequenced, AAA   230/254
(90 %)
12 diff
(95.3 %id)
BU069862 insulinoma, Pancreas .d 1140 to 1332 221 to 29   fully sequenced,   193/221
(87 %)
0 diff
(100 %id)
BU787501 insulinoma, Pancreas .d 1140 to 1332 222 to 30   fully sequenced,   193/222
(86 %)
0 diff
(100 %id)
BU789516 insulinoma, Pancreas .d 1140 to 1332 199 to 7   fully sequenced,   193/199
(96 %)
0 diff
(100 %id)
BM668829 eye, Retina Foveal and Macular .d 1140 to 1342 221 to 19   fully sequenced, AAA   203/203
(100 %)
0 diff
(100 %id)
GD153030   .d 1145 to 1337 1 to 193       193/209
(92 %)
4 diff
(98.1 %id)
AA813668   .d 1155 to 1339 189 to 5       185/189
(97 %)
0 diff
(100 %id)
AI382515 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1158 to 1339 188 to 7       182/188
(96 %)
0 diff
(100 %id)
AI379382 brain, oligodendroglioma .d 1187 to 1344 1 to 159   AAA Submitted on the opposite strand 159/159
(100 %)
6 diff
(96.3 %id)
AI923580 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 1199 to 1338 152 to 13   AAA   140/140
(100 %)
0 diff
(100 %id)
BE221834 Kidney .d 1213 to 1339 127 to 1       127/127
(100 %)
1 diff
(99.3 %id)
FN123160 breast carcinoma .d 1242 to 1339 1 to 98       98/100
(98 %)
1 diff
(99.0 %id)
BG030963 breast, mammary adenocarcinoma, cell line .e 1 to 760 1 to 754 F40L D41M D42M E43K E44K ... tiling clone, AAA   754/754
(100 %)
16 diff
(97.9 %id)
AI968286 pooled germ cell tumors .e 278 to 758 505 to 25   tiling clone, AAA   481/481
(100 %)
7 diff
(98.6 %id)
AI656507 pooled germ cell tumors .e 531 to 758 252 to 25   tiling clone, AAA   228/228
(100 %)
2 diff
(99.2 %id)
FN131426 breast carcinoma .e 657 to 750 1 to 91   tiling clone,   91/103
(88 %)
7 diff
(93.3 %id)
AK309764 brain .f 1 to 1574 2 to 1575 E45G tiling clone,   1575/1575
(100 %)
3 diff
(99.9 %id)
CB854682 lung .f 995 to 1615 639 to 19   tiling clone, AAA   621/621
(100 %)
2 diff
(99.7 %id)
TI_153954879   .g 1 to 598 81 to 683   tiling clone,   603/1038
(58 %)
19 diff
(98.2 %id)
AA282304 germinal center B cell .g 451 to 867 1 to 417   tiling clone, fully sequenced,   417/417
(100 %)
1 diff
(99.8 %id)
TI_154057494   .g 457 to 1158 780 to 86 V7F R9E K10N S11Q E13R ... AAA   695/951
(73 %)
7 diff
(99.3 %id)
CB850772 lung, Primary Lung Cystic Fibrosis EpithelialCells .g 457 to 1158 720 to 19 D90G AAA   702/711
(98 %)
3 diff
(99.6 %id)
W48803 senescent fibroblast .g 461 to 867 1 to 411   fully sequenced,   411/411
(100 %)
4 diff
(99.1 %id)
BU689180 lung .g 462 to 1152 709 to 19 R5X D90G AAA   691/693
(99 %)
1 diff
(99.9 %id)
TI_154105074   .g 470 to 1158 772 to 84 Y15F D16X D90G AAA   689/689
(100 %)
3 diff
(99.6 %id)
BU620668 cell lines, Chondrosarcoma .g 474 to 1152 696 to 19 V7F R9E K10N S11Q E13R ... AAA   678/678
(100 %)
4 diff
(99.5 %id)
CA417840 Chondrosarcoma Cell line .g 477 to 1158 700 to 19 D90G tiling clone, AAA   682/682
(100 %)
1 diff
(99.9 %id)
CA446362 Chondrosarcoma, Left Pubic Bone .g 491 to 1158 686 to 19 Y15F D16X D90G AAA   668/668
(100 %)
3 diff
(99.6 %id)
CA419310 Bone, Human Chondrosarcoma Cell Line .g 507 to 1158 668 to 19 V7F R9E K10N S11Q E13R ... AAA   650/650
(100 %)
2 diff
(99.7 %id)
CD370915 Alveolar Macrophage, lung .g 512 to 1152 659 to 19 D90G AAA   641/642
(99 %)
1 diff
(99.9 %id)
TI_149272938   .g 516 to 1158 736 to 94 E6K D90G AAA   643/971
(66 %)
4 diff
(99.6 %id)
W49803 senescent fibroblast .g 806 to 1152 349 to 1   fully sequenced,   349/349
(100 %)
2 diff
(99.5 %id)
AA282305 germinal center B cell .g 806 to 1158 379 to 27   fully sequenced, AAA   353/353
(100 %)
0 diff
(100 %id)
BX097491   .h 1 to 712 1 to 712   tiling clone,   712/712
(100 %)
1 diff
(99.9 %id)
AA393561   .h 1 to 500 1 to 500       500/504
(99 %)
3 diff
(99.5 %id)
AA435497   .h 635 to 960 328 to 3   tiling clone,   326/328
(99 %)
0 diff
(100 %id)
DA771414 brain .i 1 to 571 2 to 572   tiling clone, to resequence, capped   571/571
(100 %)
2 diff
(99.7 %id)
AW182252 pooled .i 371 to 763 393 to 1   tiling clone,   393/393
(100 %)
1 diff
(99.8 %id)
DB325756 brain .i 1347 to 1886 540 to 1   tiling clone, to resequence,   540/540
(100 %)
2 diff
(99.7 %id)
CB131628 Liver .j 1 to 493 1 to 493 exact tiling clone,   493/493
(100 %)
0 diff
(100 %id)
DA194186 amygdala .k 1 to 584 2 to 591   tiling clone, capped   590/590
(100 %)
5 diff
(99.2 %id)
AK094622 amygdala .k 206 to 2101 1 to 1905   tiling clone, available from FLJ,   1905/1905
(100 %)
8 diff
(99.6 %id)
DA156780 amygdala .k 207 to 755 2 to 558   capped   557/557
(100 %)
5 diff
(99.2 %id)
DA161056 amygdala .k 207 to 755 2 to 558   capped   557/557
(100 %)
5 diff
(99.2 %id)
AL713312 human skeletal muscle .k 329 to 888 1 to 568       568/568
(100 %)
4 diff
(99.3 %id)
AV710464 adrenal cortico adenoma for Cushing'ssyndrome .k 379 to 858 488 to 1   tiling clone, Submitted on the opposite strand 488/517
(94 %)
4 diff
(99.3 %id)
BU618363 Cell Line, Chondrosarcoma .k 621 to 1182 7 to 568   tiling clone, Submitted on the opposite strand 562/568
(98 %)
6 diff
(99.0 %id)
AL597780   .k 642 to 1297 1 to 656       656/656
(100 %)
1 diff
(99.9 %id)
CN289746 embryonic stem cells, DMSO-treated H9 cellline .k 1182 to 1939 10 to 769   tiling clone,   760/769
(98 %)
6 diff
(99.3 %id)
DA357196 subthalamic nucleus .k 1444 to 1997 2 to 557   to resequence, capped   556/556
(100 %)
3 diff
(99.5 %id)
DB301958 amygdala .k 1557 to 2101 546 to 1   tiling clone,   546/546
(100 %)
1 diff
(99.9 %id)
BQ638735 eye, retina .k 1719 to 2329 1 to 611   tiling clone,   611/611
(100 %)
0 diff
(100 %id)
BE086786 breast .k 2405 to 2540 1 to 136   tiling clone,   136/136
(100 %)
5 diff
(96.4 %id)
DB310505 subthalamic nucleus .k 2493 to 3007 522 to 1 H2I I8N E9R P10T L11F ... tiling clone, to resequence,   522/527
(99 %)
12 diff
(97.8 %id)
AI167297 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 2500 to 3002 503 to 1 D27G I30F tiling clone,   503/503
(100 %)
2 diff
(99.7 %id)
AI634821 Kidney .k 2501 to 3002 504 to 4 D27G K72R D73I M74*     501/504
(99 %)
2 diff
(99.7 %id)
BG236447 blood, lymphocyte .k 2537 to 3008 480 to 9 D27G I30F     472/480
(98 %)
2 diff
(99.6 %id)
BF790927 muscle (skeletal) .l 1 to 680 1 to 671 W25C S26P I27S I29S L30W ... tiling clone,   671/840
(79 %)
19 diff
(97.8 %id)
BU506770 mixed (pool of 40 RNAs) .l 20 to 603 1 to 585 C99W tiling clone,   585/864
(67 %)
18 diff
(98.0 %id)
AI221278 pooled .l 433 to 864 433 to 2   tiling clone,   432/433
(99 %)
0 diff
(100 %id)
BF949788 nervous_normal .m-u 1 to 575 18 to 588   tiling clone,   571/603
(94 %)
13 diff
(97.9 %id)
CA777634 Pancreas, Purified pancreatic islet .m-u 299 to 1024 1 to 726   tiling clone,   726/726
(100 %)
5 diff
(99.4 %id)
AA738066 pooled germ cell tumors .m-u 756 to 1192 436 to 1   tiling clone,   436/436
(100 %)
1 diff
(99.8 %id)
BG209089   .m-u 1021 to 1193 1 to 176       176/188
(93 %)
9 diff
(95.3 %id)
BG218047   .m-u 1021 to 1199 1 to 179   tiling clone,   179/191
(93 %)
8 diff
(95.9 %id)
BG219088   .m-u 1031 to 1193 13 to 175       163/187
(87 %)
4 diff
(97.9 %id)
AI913355 Kidney .n 1 to 523 530 to 8 T60P tiling clone,   523/530
(98 %)
2 diff
(99.7 %id)
DA193591 amygdala .o 1 to 575 2 to 576 exact tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
AI651965 pooled germ cell tumors .o 342 to 1374 723 to 1   tiling clone, Suspected internal deletion 723/1160
(62 %)
19 diff
(98.4 %id)
AA053714 eye, retina .p-u 1 to 615 1 to 609 S4L R5X tiling clone, Submitted on the opposite strand 609/654
(93 %)
11 diff
(98.4 %id)
AI571789 anaplastic oligodendroglioma, brain .p-u 302 to 680 379 to 1   tiling clone,   379/379
(100 %)
3 diff
(99.3 %id)
AK308776 amygdala Gene CCDC104, variant not shown         Suspected internal deletion, this clone was ignored    
DB302792 amygdala Gene CCDC104, variant not shown              
DA176805 amygdala Gene CCDC104, variant not shown       capped      
DA242788 brain Gene CCDC104, variant not shown       capped      
AI611260 Prostate Gene CCDC104, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI884695 anaplastic oligodendroglioma, brain Gene CCDC104, variant not shown         Suspected internal deletion, this clone was ignored    
AW160445 brain, frontal lobe Gene CCDC104, variant not shown         This clone was ignored    
AW162455 brain, frontal lobe Gene CCDC104, variant not shown         This clone was ignored    
AW160460 brain, frontal lobe Gene CCDC104, variant not shown         This clone was ignored    
AW162471 brain, frontal lobe Gene CCDC104, variant not shown         This clone was ignored    
TI_149287442   Gene CCDC104, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CA310425 cell lines, Chondrosarcoma Gene CCDC104, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n, .o, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C