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Gene ZC3HAV1LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
84 supporting clones for gene ZC3HAV1L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AI540088 B-cell, chronic lymphotic leukemia .a 1 to 479 479 to 1   tiling clone,   479/479
(100 %)
1 diff
(99.8 %id)
BF316695 brain, neuroblastoma .a 407 to 1173 1 to 769       769/839
(91 %)
30 diff
(96.5 %id)
BC008842 Brain, neuroblastoma .a 408 to 2160 1 to 1753 M244I tiling clone, available from MGC, AAA   1753/1753
(100 %)
1 diff
(100.0 %id)
NM_080660.3   .a 408 to 2160 1 to 1753 exact RefSeq, AAA   1753/1753
(100 %)
0 diff
(100 %id)
TI_1948243525.
matches multiple genes
  .a 413 to 1095 132 to 820   AAA also hits gene SELS 689/1189
(57 %)
19 diff
(98.5 %id)
EL733318 mixed .a 420 to 1069 1 to 650       650/650
(100 %)
4 diff
(99.4 %id)
N24803 melanocyte .a 472 to 892 1 to 420     Submitted on the opposite strand 420/429
(97 %)
16 diff
(96.3 %id)
AW293784   .a 473 to 979 1 to 507     Submitted on the opposite strand 507/507
(100 %)
1 diff
(99.9 %id)
BF516126   .a 473 to 997 1 to 525     Submitted on the opposite strand 525/529
(99 %)
2 diff
(99.7 %id)
BF317070 brain, neuroblastoma .a 656 to 1132 267 to 744       717/1012
(70 %)
47 diff
(95.4 %id)
AI949638 2 pooled tumors (clear cell type), Kidney .a 1343 to 1722 590 to 210       381/590
(64 %)
0 diff
(100 %id)
CN273630 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1433 to 1721 1 to 289       289/289
(100 %)
6 diff
(98.0 %id)
DB147225 thymus .a 1867 to 2434 2 to 571   tiling clone, capped   570/570
(100 %)
2 diff
(99.7 %id)
EH348903   .a 1995 to 2068 1 to 75       75/75
(100 %)
3 diff
(96.0 %id)
GD151200   .a 2187 to 2278 92 to 1     Submitted on the opposite strand 92/93
(98 %)
2 diff
(97.9 %id)
AA496369 ovarian tumor, ovary .a 2207 to 2763 1 to 558   tiling clone, Submitted on the opposite strand 558/558
(100 %)
1 diff
(99.9 %id)
AA496646 ovarian tumor, ovary .a 2419 to 2834 423 to 9     Submitted on the opposite strand 415/423
(98 %)
0 diff
(100 %id)
DB089345 testis .a 2533 to 3085 2 to 554   tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
BM800000 eye, retinoblastoma .a 2780 to 3814 25 to 1070   tiling clone,   1046/1095
(95 %)
6 diff
(99.5 %id)
EH329110   .a 2836 to 2919 1 to 84       84/84
(100 %)
0 diff
(100 %id)
AW865453 stomach_normal .a 3236 to 3665 1 to 426   tiling clone,   426/428
(99 %)
6 diff
(98.6 %id)
BE142104 head_neck .a 3520 to 3926 410 to 2   tiling clone, Submitted on the opposite strand 409/410
(99 %)
0 diff
(100 %id)
AL697647 human skeletal muscle .a 3715 to 4292 1 to 579   tiling clone,   579/579
(100 %)
1 diff
(99.9 %id)
DN991930 brain, whole brain .a 3933 to 4618 9 to 694       686/694
(98 %)
6 diff
(99.2 %id)
DA902472   .a 3973 to 4533 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
AK098156 trachea .a 4026 to 6367 1 to 2343   tiling clone, available from FLJ,   2343/2343
(100 %)
2 diff
(100.0 %id)
DB202998 trachea .a 4027 to 4607 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
BM470887 eye, retinoblastoma .a 4056 to 5036 1 to 988       988/998
(98 %)
70 diff
(93.0 %id)
BG392723 embryonal carcinoma, cell line, testis .a 4437 to 4504 779 to 839       798/890
(89 %)
42 diff
(95.3 %id)
BE897967 melanotic melanoma, skin .a 4496 to 5163 1 to 669       669/962
(69 %)
36 diff
(96.3 %id)
BQ216577 large cell carcinoma, lung .a 4520 to 5114 1 to 602       602/954
(63 %)
23 diff
(97.6 %id)
BQ216724 embryonal carcinoma, cell line, testis .a 4727 to 5178 1 to 452   AAA   452/471
(95 %)
3 diff
(99.4 %id)
CK431013 eye, lacrimal gland .a 4743 to 5390 1 to 648       648/648
(100 %)
0 diff
(100 %id)
BE892975 melanotic melanoma, skin .a 4745 to 5474 1 to 730       730/802
(91 %)
15 diff
(98.2 %id)
CB215232 normal endometrium, late proliferativephase, cycle day 13, uterus .a 4828 to 5455 1 to 628       628/628
(100 %)
2 diff
(99.7 %id)
AA425468   .a 4852 to 5376 1 to 524       524/524
(100 %)
6 diff
(98.9 %id)
CN398168 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4905 to 5513 1 to 609       609/609
(100 %)
2 diff
(99.7 %id)
BG705732 brain, hypothalamus .a 4932 to 5661 1 to 728       728/728
(100 %)
8 diff
(99.0 %id)
BI596639 brain, hypothalamus .a 4932 to 5790 1 to 856       856/896
(95 %)
25 diff
(97.3 %id)
TI_45209067   .a 4937 to 5790 98 to 948       851/988
(86 %)
21 diff
(97.9 %id)
CB123827 Liver .a 4945 to 5404 460 to 1     Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
BG498696 adenocarcinoma, Prostate .a 4951 to 5362 249 to 659       411/661
(62 %)
6 diff
(99.1 %id)
W01925 liver and spleen .a 5017 to 5321 1 to 307       307/310
(99 %)
5 diff
(98.4 %id)
BX099074 liver and spleen .a 5028 to 5806 1 to 780       780/782
(99 %)
5 diff
(99.4 %id)
BG122577 adenocarcinoma, cell line, Liver .a 5030 to 5693 1 to 671       671/957
(70 %)
24 diff
(97.5 %id)
N77096 liver and spleen .a 5066 to 5137 1 to 72       72/72
(100 %)
1 diff
(98.7 %id)
CN398167 embryonic stem cells, cell lines H1, H7, andH9 .a 5126 to 5824 1 to 702       702/702
(100 %)
8 diff
(98.9 %id)
BP418626 small intestine .a 5146 to 5607 1 to 462     Submitted on the opposite strand 462/462
(100 %)
0 diff
(100 %id)
AV762697 bone marrow .a 5215 to 5823 9 to 614       606/766
(79 %)
19 diff
(97.6 %id)
BU929885 placenta .a 5272 to 6047 1 to 777       777/777
(100 %)
11 diff
(98.6 %id)
H93285 liver and spleen .a 5384 to 5828 447 to 1       447/477
(93 %)
4 diff
(99.2 %id)
BG613375 embryonal carcinoma, testis .a 5397 to 6236 1 to 840       840/858
(97 %)
30 diff
(96.6 %id)
N71027 liver and spleen .a 5416 to 5826 416 to 1       416/418
(99 %)
6 diff
(98.6 %id)
N59413 liver and spleen .a 5454 to 5828 376 to 1       376/376
(100 %)
2 diff
(99.5 %id)
AA249573   .a 5629 to 5792 1 to 161       161/161
(100 %)
7 diff
(95.7 %id)
C03189 heart .a 5650 to 5846 1 to 198       198/198
(100 %)
4 diff
(98.0 %id)
C03622 heart .a 5650 to 5940 1 to 291       291/291
(100 %)
1 diff
(99.7 %id)
AA332845 Embryo, 8 weeks .a 5695 to 5982 1 to 289       289/289
(100 %)
1 diff
(99.7 %id)
BF594774 Kidney .a 5696 to 6268 573 to 1       573/573
(100 %)
1 diff
(99.9 %id)
FN088833 breast carcinoma .a 5773 to 5865 1 to 92       92/93
(98 %)
3 diff
(96.8 %id)
AW973896   .a 5784 to 6366 583 to 1     Submitted on the opposite strand 583/583
(100 %)
7 diff
(98.8 %id)
CN292183 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 5799 to 6303 1 to 505   tiling clone,   505/505
(100 %)
0 diff
(100 %id)
DB348445 trachea .a 5827 to 6367 541 to 1       541/541
(100 %)
1 diff
(99.9 %id)
AI188445 placenta .a 5852 to 6367 528 to 13   AAA   516/516
(100 %)
1 diff
(99.9 %id)
BI491117 cochlea, ear .a 5854 to 6367 532 to 19   AAA   514/514
(100 %)
0 diff
(100 %id)
AW474319 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 5856 to 6368 514 to 1       514/514
(100 %)
1 diff
(99.9 %id)
AI923772 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 5893 to 6368 476 to 1       476/476
(100 %)
1 diff
(99.8 %id)
BQ011509 placenta .a 5901 to 6368 485 to 19   AAA   467/467
(100 %)
2 diff
(99.6 %id)
BQ011891 placenta .a 5914 to 6367 473 to 19   AAA   455/455
(100 %)
1 diff
(99.8 %id)
AI803442   .a 5921 to 6368 454 to 7   tiling clone,   448/454
(98 %)
0 diff
(100 %id)
AI634185 Kidney, renal cell tumor .a 5925 to 6368 452 to 9       444/452
(98 %)
0 diff
(100 %id)
AW057671 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5933 to 6367 435 to 1       435/435
(100 %)
2 diff
(99.6 %id)
AW771705 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 5952 to 6368 417 to 1       417/417
(100 %)
1 diff
(99.8 %id)
BQ012689 placenta .a 5956 to 6367 430 to 19   AAA   412/412
(100 %)
0 diff
(100 %id)
BQ024417 placenta .a 5971 to 6367 415 to 19   AAA   397/397
(100 %)
0 diff
(100 %id)
AA594540 colon, colon tumor RER+ .a 5994 to 6367 374 to 1       374/374
(100 %)
0 diff
(100 %id)
AA774131   .a 6051 to 6265 215 to 1     Submitted on the opposite strand 215/215
(100 %)
0 diff
(100 %id)
AA775256 whole brain .b-u 1 to 404 421 to 18 exact tiling clone,   404/421
(95 %)
0 diff
(100 %id)
BF367123 placenta_normal .c-u 1 to 271 287 to 17 L15V F47S G76D L77* tiling clone,   271/291
(93 %)
0 diff
(100 %id)
BF817841 colon_ins Gene ZC3HAV1L, variant not shown         This clone was ignored    
EL735671 mixed Gene ZC3HAV1L, variant not shown         This clone was ignored    
BF979011 melanotic melanoma, high MDR, skin Gene ZC3HAV1L, variant not shown         This clone was ignored    
BF690992 melanotic melanoma, high MDR, skin Gene ZC3HAV1L, variant not shown         This clone was ignored    
BG503519 embryonal carcinoma, testis Gene ZC3HAV1L, variant not shown         This clone was ignored    
BG613584 embryonal carcinoma, testis Gene ZC3HAV1L, variant not shown         This clone was ignored    
BC020784 Testis, embryonal carcinoma Gene ZC3HAV1L, variant not shown       available from MGC, AAA This clone was ignored    
BG616142 embryonal carcinoma, testis Gene ZC3HAV1L, variant not shown       available from MGC, This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C