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Gene YIPF4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
328 supporting clones for gene YIPF4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
G36938   .a 1 to 471 477 to 1   tiling clone, Submitted on the opposite strand 477/479
(99 %)
13 diff
(97.3 %id)
BP207600 coronary artery .a 262 to 843 1 to 582   tiling clone,   582/582
(100 %)
3 diff
(99.5 %id)
NM_032312.3   .a 265 to 2228 1 to 1964 exact RefSeq, AAA   1964/1964
(100 %)
0 diff
(100 %id)
DA426180 colon .a 266 to 827 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA833054 placenta .a 272 to 929 2 to 659   capped   658/658
(100 %)
2 diff
(99.7 %id)
DB474400 hippocampus .a 274 to 769 1 to 496       496/496
(100 %)
2 diff
(99.6 %id)
BI552216 brain, hippocampus .a 278 to 1016 1 to 739       737/797
(92 %)
21 diff
(97.4 %id)
BI551948 brain, hippocampus .a 278 to 1064 1 to 785       785/786
(99 %)
24 diff
(97.0 %id)
BI669346 brain, hypothalamus .a 278 to 994 1 to 716       716/718
(99 %)
11 diff
(98.5 %id)
DA156815 amygdala .a 281 to 846 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA270136 caudate nucleus .a 281 to 673 2 to 397   capped   396/396
(100 %)
1 diff
(99.8 %id)
BI549657 brain, hippocampus .a 281 to 998 1 to 717       717/717
(100 %)
8 diff
(98.9 %id)
DA827660 pericardium .a 281 to 845 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BM147617 leukopheresis .a 282 to 532 1 to 251       251/251
(100 %)
7 diff
(97.3 %id)
AU279440   .a 283 to 520 1 to 238       238/238
(100 %)
0 diff
(100 %id)
DT217422 brain .a 283 to 642 1 to 360       360/360
(100 %)
0 diff
(100 %id)
CB988609 Human Placenta, placenta .a 283 to 887 28 to 640       613/847
(72 %)
20 diff
(97.7 %id)
TI_44171661   .a 283 to 1064 91 to 870       780/871
(89 %)
23 diff
(97.4 %id)
TI_44171929   .a 283 to 1016 89 to 822       734/880
(83 %)
18 diff
(98.0 %id)
TI_44345903   .a 283 to 994 85 to 795       711/797
(89 %)
10 diff
(98.8 %id)
CB148723 Liver .a 283 to 596 1 to 314       314/314
(100 %)
0 diff
(100 %id)
BP327512 prostata .a 283 to 862 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP243250 Liver .a 284 to 765 1 to 483       483/571
(84 %)
20 diff
(96.5 %id)
DA831957 placenta .a 284 to 924 2 to 645   capped   644/644
(100 %)
6 diff
(99.1 %id)
DB290370 uterus .a 284 to 854 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB505725 hypothalamus .a 285 to 790 1 to 507       507/507
(100 %)
5 diff
(99.1 %id)
AK098486 stomach mucosa .a 286 to 2225 1 to 1941 exact tiling clone, available from FLJ,   1941/1941
(100 %)
1 diff
(100.0 %id)
DB505271 hypothalamus .a 286 to 737 1 to 452       452/452
(100 %)
1 diff
(99.8 %id)
BP257463 heart .a 286 to 854 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
CB960927 Human Placenta, placenta .a 286 to 772 28 to 515       488/944
(51 %)
19 diff
(98.0 %id)
TI_44170864   .a 286 to 998 129 to 840       712/840
(84 %)
8 diff
(99.1 %id)
BP327279 prostata .a 286 to 865 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP341511 stomach mucosa .a 286 to 870 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DA041766 bladder .a 287 to 844 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA724691   .a 287 to 848 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA775316 brain .a 287 to 862 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA817184   .a 287 to 863 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA828959 placenta .a 287 to 937 2 to 652   capped   651/776
(83 %)
3 diff
(99.7 %id)
DB244303 uterus, tumor tissue .a 287 to 597 2 to 312   capped   311/311
(100 %)
0 diff
(100 %id)
DB294407   .a 287 to 1029 2 to 744   capped   743/743
(100 %)
4 diff
(99.5 %id)
DA176790 amygdala .a 289 to 573 2 to 287   capped   286/286
(100 %)
1 diff
(99.7 %id)
DB504518 hypothalamus .a 289 to 770 1 to 482       482/482
(100 %)
1 diff
(99.8 %id)
DA342741 substantia nigra .a 290 to 865 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA661964   .a 290 to 726 2 to 438   capped   437/437
(100 %)
0 diff
(100 %id)
DB237117 trachea .a 290 to 865 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BP275096 Kidney .a 291 to 872 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA832405 placenta .a 293 to 1007 2 to 717   capped   716/716
(100 %)
4 diff
(99.5 %id)
BM764320 lymph node, stomach .a 295 to 467 1 to 173       173/173
(100 %)
0 diff
(100 %id)
BM851316 lymph node, stomach .a 295 to 488 1 to 194       194/197
(98 %)
1 diff
(99.5 %id)
BP333309 salivary gland .a 295 to 711 1 to 418       418/581
(71 %)
8 diff
(98.7 %id)
DA266713 caudate nucleus .a 296 to 866 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA862158 placenta .a 296 to 882 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DB503123 hypothalamus .a 297 to 769 1 to 473       473/473
(100 %)
4 diff
(99.2 %id)
BJ991041 hepatoblastoma .a 297 to 882 1 to 586       586/586
(100 %)
0 diff
(100 %id)
BP274409 Kidney .a 297 to 876 1 to 580       580/582
(99 %)
6 diff
(99.0 %id)
DA662403   .a 298 to 587 2 to 291   capped   290/290
(100 %)
0 diff
(100 %id)
DB456724 testis .a 300 to 792 1 to 493       493/493
(100 %)
0 diff
(100 %id)
BI548369 brain, hippocampus .a 300 to 1014 1 to 724       724/778
(93 %)
23 diff
(97.1 %id)
TI_44167190   .a 300 to 1014 123 to 846       724/900
(80 %)
25 diff
(97.3 %id)
DA267699 caudate nucleus .a 301 to 805 2 to 507   capped   506/506
(100 %)
1 diff
(99.9 %id)
DN990433 brain, whole brain .a 302 to 996 1 to 696       696/696
(100 %)
7 diff
(99.0 %id)
CN261793 embryonic stem cells, DMSO-treated H9 cellline .a 303 to 463 8 to 168       161/168
(95 %)
6 diff
(96.5 %id)
CN261794 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 304 to 940 1 to 637       637/637
(100 %)
2 diff
(99.7 %id)
BF978036 melanotic melanoma, high MDR, skin .a 304 to 938 1 to 629       629/872
(72 %)
19 diff
(97.9 %id)
BG829335 muscle, rhabdomyosarcoma .a 305 to 976 1 to 672       672/672
(100 %)
1 diff
(99.9 %id)
BG762800 melanotic melanoma, high MDR (cell line), skin .a 307 to 1024 1 to 718       718/718
(100 %)
1 diff
(99.9 %id)
BG769422 melanotic melanoma, high MDR (cell line), skin .a 307 to 913 1 to 601       601/601
(100 %)
14 diff
(97.7 %id)
TI_45208905   .a 307 to 875 74 to 642       569/642
(88 %)
6 diff
(99.1 %id)
TI_45209001   .a 307 to 1009 67 to 767       701/767
(91 %)
10 diff
(98.7 %id)
BM712551 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 307 to 836 1 to 530       530/530
(100 %)
0 diff
(100 %id)
BF973037 leiomyosarcoma cell line, uterus .a 309 to 1087 1 to 763       763/949
(80 %)
25 diff
(97.4 %id)
BG490676 large cell carcinoma, lung .a 310 to 1011 1 to 723       723/853
(84 %)
59 diff
(93.1 %id)
BI600373 brain, hypothalamus .a 312 to 1107 1 to 800       800/969
(82 %)
29 diff
(97.1 %id)
TI_45211853   .a 316 to 1107 91 to 886       796/1055
(75 %)
30 diff
(97.2 %id)
DA112701 cerebellum .a 317 to 907 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
BP206640 coronary artery .a 317 to 889 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
BP259508 heart .a 317 to 900 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BE253799 eye, retinoblastoma .a 317 to 1127 1 to 809       809/840
(96 %)
27 diff
(96.8 %id)
BE740864 adenocarcinoma cell line, ovary .a 317 to 1134 1 to 822       822/858
(95 %)
23 diff
(97.4 %id)
BP338222 Spleen .a 317 to 895 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DB014892 esophageal, tumor tissue .a 317 to 808 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
AB072898   .a 318 to 2226 1 to 1907 exact     1907/1911
(99 %)
3 diff
(99.9 %id)
DA127786 cerebellum .a 318 to 907 2 to 593   capped   592/592
(100 %)
2 diff
(99.7 %id)
DA142382 alzheimer cortex .a 318 to 856 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA177523 amygdala .a 318 to 877 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA286687 corpus callosum .a 318 to 891 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA425327 colon .a 318 to 808 2 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DA547861   .a 318 to 871 2 to 559   capped   558/558
(100 %)
4 diff
(99.3 %id)
DA750079   .a 318 to 892 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB124451 thymus .a 318 to 815 2 to 501   capped   500/501
(99 %)
3 diff
(99.5 %id)
BI596304 brain, hypothalamus .a 320 to 875 1 to 556       556/556
(100 %)
3 diff
(99.5 %id)
BI596573 brain, hypothalamus .a 320 to 1009 1 to 688       688/688
(100 %)
8 diff
(98.9 %id)
BG473307 eye, retinoblastoma .a 323 to 792 1 to 470       470/470
(100 %)
1 diff
(99.8 %id)
DB499880 hypothalamus .a 325 to 832 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
DB501899 hypothalamus .a 325 to 805 1 to 482       482/482
(100 %)
1 diff
(99.8 %id)
DB506278 hypothalamus .a 325 to 784 1 to 460       460/460
(100 %)
0 diff
(100 %id)
BE274205 melanotic melanoma, skin .a 325 to 936 1 to 613       613/624
(98 %)
20 diff
(96.8 %id)
BC004875 Lymph, Burkitt lymphoma .a 338 to 2212 1 to 1873 exact tiling clone, available from MGC, AAA   1873/1873
(100 %)
1 diff
(100.0 %id)
BE299277 muscle, rhabdomyosarcoma .a 338 to 926 28 to 622       595/622
(95 %)
9 diff
(98.6 %id)
BE297799 muscle, rhabdomyosarcoma .a 338 to 1016 19 to 699       681/770
(88 %)
9 diff
(98.9 %id)
DB184477 liver, tumor tissue .a 338 to 892 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
CN261795 embryonic stem cells, cell lines H1, H7, andH9 .a 340 to 927 1 to 589       589/589
(100 %)
2 diff
(99.7 %id)
DA750970   .a 345 to 911 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BE560491 Burkitt lymphoma, lymph .a 357 to 1007 1 to 650       650/796
(81 %)
19 diff
(97.7 %id)
AW294431   .a 465 to 911 1 to 446     Submitted on the opposite strand 446/460
(96 %)
2 diff
(99.6 %id)
BE671490 carcinoid, lung .a 467 to 934 1 to 468     Submitted on the opposite strand 468/468
(100 %)
0 diff
(100 %id)
AI654040 Kidney .a 473 to 981 1 to 509     Submitted on the opposite strand 509/509
(100 %)
2 diff
(99.7 %id)
AI768811 2 pooled tumors (clear cell type), Kidney .a 473 to 892 1 to 419     Submitted on the opposite strand 419/419
(100 %)
7 diff
(98.4 %id)
BE999993 colon, colon tumor, RER+ .a 473 to 1011 1 to 540     Submitted on the opposite strand 540/540
(100 %)
3 diff
(99.5 %id)
AI190721   .a 482 to 934 1 to 453     Submitted on the opposite strand 453/453
(100 %)
1 diff
(99.8 %id)
AI334995 2 pooled tumors (clear cell type), Kidney .a 482 to 958 1 to 475     Submitted on the opposite strand 475/475
(100 %)
3 diff
(99.4 %id)
AI701521 carcinoid, lung .a 489 to 931 1 to 443     Submitted on the opposite strand 443/443
(100 %)
4 diff
(99.1 %id)
AW515939 lymph node, lymphoma, follicular mixed small and largecell .a 491 to 930 1 to 440     Submitted on the opposite strand 440/440
(100 %)
1 diff
(99.8 %id)
AA918122 adenocarcinoma, colon .a 502 to 972 10 to 481     Submitted on the opposite strand 472/481
(98 %)
7 diff
(98.6 %id)
AA136616 uterus .a 505 to 894 1 to 389     Submitted on the opposite strand 389/389
(100 %)
1 diff
(99.8 %id)
AA136536 uterus .a 505 to 893 1 to 391     Submitted on the opposite strand 391/391
(100 %)
2 diff
(99.5 %id)
AA156825 uterus .a 505 to 933 1 to 427     Submitted on the opposite strand 427/427
(100 %)
7 diff
(98.4 %id)
AA283819 germinal center B cell .a 505 to 957 1 to 453     Submitted on the opposite strand 453/453
(100 %)
0 diff
(100 %id)
AA910701 carcinoid, lung .a 505 to 863 1 to 359     Submitted on the opposite strand 359/359
(100 %)
0 diff
(100 %id)
AA905142 pooled .a 505 to 906 1 to 399     Submitted on the opposite strand 399/399
(100 %)
20 diff
(95.0 %id)
AA907617 pooled .a 505 to 868 1 to 360     Submitted on the opposite strand 360/360
(100 %)
3 diff
(99.2 %id)
AA935936 carcinoid, lung .a 505 to 883 1 to 379     Submitted on the opposite strand 379/379
(100 %)
2 diff
(99.5 %id)
AA973142 pooled .a 505 to 871 1 to 367     Submitted on the opposite strand 367/367
(100 %)
1 diff
(99.8 %id)
AI018315 pooled .a 505 to 874 1 to 370     Submitted on the opposite strand 370/370
(100 %)
7 diff
(98.2 %id)
AI376080 uterus .a 505 to 949 1 to 445     Submitted on the opposite strand 445/445
(100 %)
2 diff
(99.6 %id)
AI419599 brain, glioblastoma (pooled) .a 505 to 814 1 to 309     Submitted on the opposite strand 309/309
(100 %)
1 diff
(99.7 %id)
AI768296 pooled .a 505 to 992 1 to 488     Submitted on the opposite strand 488/488
(100 %)
4 diff
(99.2 %id)
AI739519 colon, colon tumor, RER+ .a 505 to 879 1 to 375     Submitted on the opposite strand 375/375
(100 %)
0 diff
(100 %id)
AI924590 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 505 to 930 1 to 426     Submitted on the opposite strand 426/426
(100 %)
0 diff
(100 %id)
AW665618 pooled .a 505 to 981 1 to 477     Submitted on the opposite strand 477/477
(100 %)
2 diff
(99.6 %id)
BE551257 carcinoid, lung .a 505 to 882 1 to 378     Submitted on the opposite strand 378/378
(100 %)
0 diff
(100 %id)
BF002403 colon, colon tumor, RER+ .a 505 to 983 1 to 479     Submitted on the opposite strand 479/479
(100 %)
0 diff
(100 %id)
BF109294 pooled .a 505 to 959 1 to 455     Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
AI694656 carcinoid, lung .a 506 to 969 1 to 459     Submitted on the opposite strand 459/459
(100 %)
10 diff
(97.9 %id)
BU567503 testis .a 510 to 1334 1 to 826 L130S V203C F204V W205L A206G ...     826/826
(100 %)
21 diff
(97.5 %id)
CV026406 mixed .a 532 to 1159 1 to 628       628/628
(100 %)
1 diff
(99.9 %id)
TI_1948100994   .a 532 to 799 128 to 395       268/294
(91 %)
6 diff
(98.0 %id)
TI_1948101141   .a 532 to 877 132 to 477       346/374
(92 %)
6 diff
(98.4 %id)
TI_1948101423   .a 532 to 967 126 to 561   fully sequenced,   436/561
(77 %)
6 diff
(99.0 %id)
AA828548 germinal center B cell .a 549 to 975 1 to 427     Submitted on the opposite strand 427/427
(100 %)
0 diff
(100 %id)
C03474 heart .a 593 to 895 1 to 303       303/303
(100 %)
2 diff
(99.4 %id)
AL709356 human skeletal muscle .a 717 to 1437 1 to 718       718/718
(100 %)
4 diff
(99.5 %id)
BF541222 hypernephroma, Kidney .a 746 to 1440 1 to 681       681/791
(86 %)
30 diff
(96.3 %id)
CN261798 embryonic stem cells, DMSO-treated H9 cellline .a 752 to 1150 1 to 399       399/399
(100 %)
3 diff
(99.3 %id)
BG289792 bladder, transitional cell papilloma, cell line .a 774 to 1437 1 to 650       650/928
(70 %)
14 diff
(98.5 %id)
BU607528 Human Lung Epithelial cells, lung .a 787 to 1527 756 to 19   AAA   738/738
(100 %)
5 diff
(99.4 %id)
BM760364 lymph node, stomach .a 810 to 1362 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BM838646 lymph node, stomach .a 810 to 1380 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
BG620435 placenta .a 821 to 1525 1 to 720       716/745
(96 %)
56 diff
(92.5 %id)
BG165127 hypernephroma, cell line, Kidney .a 823 to 1565 1 to 724       724/912
(79 %)
36 diff
(96.1 %id)
TI_151751203   .a 829 to 1501 671 to 1       671/673
(99 %)
15 diff
(97.8 %id)
CB243252 Human Lung Epithelial cells, lung .a 858 to 1527 688 to 19   AAA   670/670
(100 %)
0 diff
(100 %id)
CN261796 embryonic stem cells, cell lines H1, H7, andH9 .a 867 to 1241 1 to 375       375/375
(100 %)
0 diff
(100 %id)
TI_1948101424   .a 906 to 1274 481 to 114   fully sequenced,   368/481
(76 %)
0 diff
(100 %id)
BF211746 bone marrow, from chronic myelogenous leukemia .a 926 to 1597 1 to 669       669/894
(74 %)
30 diff
(96.7 %id)
BG164463 hypernephroma, cell line, Kidney .a 930 to 1579 1 to 648       648/907
(71 %)
9 diff
(99.1 %id)
N54968 liver and spleen .a 933 to 1404 480 to 1       480/530
(90 %)
9 diff
(98.4 %id)
BG217194   .a 937 to 1527 11 to 598   AAA   588/598
(98 %)
8 diff
(98.7 %id)
BI870714 adenocarcinoma, cell line, Liver .a 939 to 1827 1 to 895       895/960
(93 %)
41 diff
(95.8 %id)
TI_57228449   .a 939 to 1827 54 to 948       895/960
(93 %)
41 diff
(95.8 %id)
AA286996 germinal center B cell .a 946 to 1365 1 to 420       420/420
(100 %)
2 diff
(99.6 %id)
BF673132 muscle (skeletal) .a 947 to 1682 1 to 740       740/798
(92 %)
37 diff
(95.4 %id)
BE000179 breast_normal .a 953 to 1177 42 to 266       225/266
(84 %)
6 diff
(97.8 %id)
BF698558 brain, primitive neuroectoderm .a 961 to 1522 1 to 561       561/782
(71 %)
15 diff
(98.1 %id)
BF664615 brain, primitive neuroectoderm .a 964 to 1658 1 to 701       701/798
(87 %)
41 diff
(94.9 %id)
BF031179 hypernephroma, Kidney .a 973 to 1608 1 to 635       635/812
(78 %)
20 diff
(97.6 %id)
TI_1948101289   .a 1024 to 1274 364 to 115       250/269
(92 %)
0 diff
(100 %id)
N24988 melanocyte .a 1026 to 1508 490 to 1     Submitted on the opposite strand 490/495
(98 %)
12 diff
(97.6 %id)
TI_1948101142   .a 1029 to 1274 359 to 115       245/264
(92 %)
0 diff
(100 %id)
CN261792 embryonic stem cells, DMSO-treated H9 cellline .a 1035 to 1517 486 to 4     Submitted on the opposite strand 483/486
(99 %)
2 diff
(99.6 %id)
BG036183 adenocarcinoma, cell line, Prostate .a 1047 to 1709 1 to 666       666/894
(74 %)
9 diff
(99.0 %id)
TI_1948100995   .a 1049 to 1274 339 to 115       225/244
(92 %)
0 diff
(100 %id)
BP243560 Liver .a 1057 to 1638 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
CB123129 Liver .a 1062 to 1487 1 to 426       426/426
(100 %)
1 diff
(99.8 %id)
BI496922 cochlea, ear .a 1078 to 1527 8 to 457   AAA   450/457
(98 %)
6 diff
(98.7 %id)
BE565502 bladder, carcinoma, cell line .a 1087 to 1715 1 to 637       637/637
(100 %)
26 diff
(96.0 %id)
BU929690 placenta .a 1090 to 1874 1 to 793       793/793
(100 %)
12 diff
(98.5 %id)
FN083617 breast carcinoma .a 1091 to 1191 100 to 1     Submitted on the opposite strand 100/104
(96 %)
1 diff
(99.1 %id)
BF107009 placenta .a 1105 to 1524 1 to 415   AAA   415/415
(100 %)
13 diff
(96.9 %id)
AA715376 Ewing's sarcoma .a 1114 to 1527 414 to 1       414/414
(100 %)
1 diff
(99.8 %id)
BG213432   .a 1125 to 1916 1 to 787       787/788
(99 %)
6 diff
(99.3 %id)
AI469999 pooled .a 1129 to 1615 493 to 7       487/495
(98 %)
0 diff
(100 %id)
AI867360 colon, colon tumor, RER+ .a 1134 to 1527 394 to 1       394/399
(98 %)
3 diff
(99.3 %id)
CD677683 eye, Trabecular meshwork .a 1140 to 1716 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
BX643633   .a 1145 to 1834 1 to 689       689/690
(99 %)
4 diff
(99.5 %id)
BX643644   .a 1145 to 1824 1 to 679       679/679
(100 %)
2 diff
(99.8 %id)
AW264839 lung, two pooled squamous cell carcinomas .a 1149 to 1529 388 to 8       381/388
(98 %)
0 diff
(100 %id)
AW517648 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 1157 to 1529 380 to 4       377/383
(98 %)
0 diff
(100 %id)
AI635716 Kidney .a 1161 to 1529 370 to 2       369/370
(99 %)
0 diff
(100 %id)
AA284221 germinal center B cell .a 1202 to 1528 327 to 1     Submitted on the opposite strand 327/327
(100 %)
0 diff
(100 %id)
BG777571 adenocarcinoma, Prostate .a 1214 to 1812 1 to 598       598/600
(99 %)
2 diff
(99.7 %id)
BF572137 melanotic melanoma, high MDR, skin .a 1228 to 1912 1 to 674       674/873
(77 %)
56 diff
(93.6 %id)
DA714277   .a 1231 to 1782 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
FN048796 breast carcinoma .a 1238 to 1349 1 to 112       112/112
(100 %)
1 diff
(99.2 %id)
BF028462 bladder, carcinoma, cell line .a 1245 to 1912 1 to 661       661/795
(83 %)
18 diff
(97.8 %id)
D20239   .a 1265 to 1529 1 to 265     Submitted on the opposite strand 265/266
(99 %)
1 diff
(99.7 %id)
TI_149283108   .a 1272 to 1527 340 to 85   AAA   256/822
(31 %)
1 diff
(99.9 %id)
BM983996 lung, Primary Lung Epithelial Cells .a 1272 to 1527 274 to 19   AAA   256/264
(96 %)
1 diff
(99.7 %id)
BM788892 stomach .a 1328 to 1527 1 to 200   AAA   200/200
(100 %)
0 diff
(100 %id)
AI079991 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1349 to 1785 438 to 2       437/438
(99 %)
0 diff
(100 %id)
AU279719   .a 1432 to 1992 1 to 562       562/564
(99 %)
2 diff
(99.7 %id)
BF132615 lung, mucoepidermoid carcinoma .a 1464 to 1993 1 to 523       523/812
(64 %)
34 diff
(95.9 %id)
FN054091 breast carcinoma .a 1603 to 1694 93 to 1     Submitted on the opposite strand 93/103
(90 %)
1 diff
(99.1 %id)
DB379598 placenta .a 1638 to 2225 588 to 1       588/588
(100 %)
23 diff
(96.1 %id)
DB377879 placenta .a 1665 to 2228 564 to 1       564/567
(99 %)
9 diff
(98.5 %id)
BJ991042 hepatoblastoma .a 1669 to 2208 540 to 1       540/540
(100 %)
0 diff
(100 %id)
DB384509   .a 1683 to 2225 544 to 1       544/558
(97 %)
3 diff
(99.5 %id)
DB378582 placenta .a 1703 to 2228 527 to 1       527/531
(99 %)
9 diff
(98.4 %id)
BF817789 colon_ins .a 1863 to 2340 6 to 477       472/477
(98 %)
6 diff
(98.8 %id)
DB373597 placenta .a 1875 to 2223 349 to 1       349/354
(98 %)
0 diff
(100 %id)
BF244819 brain, glioblastoma .a 1878 to 2645 1 to 758       758/761
(99 %)
56 diff
(92.7 %id)
DA811797 ovary, tumor tissue .a 1890 to 2709 2 to 822   capped   821/822
(99 %)
5 diff
(99.4 %id)
FN111359 breast carcinoma .a 1899 to 1996 98 to 1     Submitted on the opposite strand 98/99
(98 %)
2 diff
(98.0 %id)
BP259019 heart .a 1908 to 2392 1 to 487       487/554
(87 %)
14 diff
(97.5 %id)
DR762180 embryonic stem .a 1923 to 2818 1 to 895   tiling clone,   895/895
(100 %)
1 diff
(99.9 %id)
AA136779 uterus .a 1945 to 2226 283 to 2     Submitted on the opposite strand 282/283
(99 %)
0 diff
(100 %id)
CD171772 testis .a 1951 to 2750 7 to 811       805/883
(91 %)
15 diff
(98.4 %id)
AI911943 adenocarcinoma, Pancreas .a 1957 to 2465 509 to 1       509/509
(100 %)
0 diff
(100 %id)
AI880440 colon .a 1962 to 2224 267 to 5       263/267
(98 %)
0 diff
(100 %id)
AA126686 uterus .a 1991 to 2226 239 to 2     Submitted on the opposite strand 238/241
(98 %)
0 diff
(100 %id)
DA571094 whole embryo, mainly head .a 2001 to 2839 2 to 835   capped   834/837
(99 %)
9 diff
(99.0 %id)
BX111023 melanocyte .a 2063 to 2666 1 to 605       605/605
(100 %)
2 diff
(99.7 %id)
AI500107 lymph node, lymphoma, follicular mixed small and largecell .a 2102 to 2225 145 to 22   AAA   124/124
(100 %)
3 diff
(97.6 %id)
N36495 melanocyte .a 2106 to 2678 1 to 568       568/571
(99 %)
19 diff
(96.7 %id)
CA942153 Pancreas, Purified pancreatic islet .a 2113 to 2581 1 to 469       469/469
(100 %)
0 diff
(100 %id)
CR738166 whole brain .a 2477 to 3241 1 to 765       765/765
(100 %)
0 diff
(100 %id)
AI742065 pooled .a 2486 to 3035 551 to 2       550/551
(99 %)
0 diff
(100 %id)
BE149198 head_neck .a 2570 to 2729 1 to 158       158/172
(91 %)
6 diff
(96.6 %id)
BF111712 pooled .a 2577 to 3029 453 to 1       453/453
(100 %)
1 diff
(99.8 %id)
DB556864 hypothalamus .a 2601 to 3037 1 to 438     Submitted on the opposite strand 438/438
(100 %)
6 diff
(98.7 %id)
CN268014 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2675 to 3325 1 to 651   tiling clone,   651/651
(100 %)
0 diff
(100 %id)
AI142756 pooled .a 2688 to 3029 342 to 1       342/343
(99 %)
0 diff
(100 %id)
AI767926 2 pooled tumors (clear cell type), Kidney .a 2696 to 3003 310 to 3       308/310
(99 %)
0 diff
(100 %id)
BF946579 nervous_normal .a 2725 to 2961 251 to 17       235/270
(87 %)
0 diff
(100 %id)
AA897583 pooled .a 2742 to 3030 289 to 1       289/289
(100 %)
2 diff
(99.4 %id)
BF946571 nervous_normal .a 2768 to 2947 184 to 9       176/195
(90 %)
0 diff
(100 %id)
BE707283 head_neck .a 2830 to 2958 128 to 1       128/155
(82 %)
1 diff
(99.4 %id)
CN274333 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2935 to 3578 644 to 1     Submitted on the opposite strand 644/644
(100 %)
3 diff
(99.6 %id)
DB371031 ovary, tumor tissue .a 2982 to 3568 581 to 1       581/594
(97 %)
22 diff
(96.3 %id)
DB357920 whole embryo, mainly head .a 2988 to 3568 573 to 1       573/576
(99 %)
25 diff
(95.7 %id)
N25784 melanocyte .a 3004 to 3568 566 to 1       566/566
(100 %)
15 diff
(97.4 %id)
CA941871 Pancreas, Purified pancreatic islet .a 3008 to 3568 561 to 1       561/561
(100 %)
9 diff
(98.4 %id)
AI076765   .a 3042 to 3572 531 to 1       531/531
(100 %)
5 diff
(99.1 %id)
BG260318 bladder, transitional cell papilloma, cell line .a 3051 to 3568 1 to 518   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 518/518
(100 %)
4 diff
(99.3 %id)
BQ229351 melanotic melanoma, skin .a 3073 to 3594 550 to 22   tiling clone, Submitted on the opposite strand 529/1027
(51 %)
0 diff
(100 %id)
DB577579 hypothalamus .a 3079 to 3568 1 to 490     Submitted on the opposite strand 490/490
(100 %)
18 diff
(96.4 %id)
DB573094 hypothalamus .a 3085 to 3568 1 to 484     Submitted on the opposite strand 484/484
(100 %)
18 diff
(96.3 %id)
AI079278   .a 3094 to 3572 479 to 1   tiling clone,   479/479
(100 %)
0 diff
(100 %id)
DB571024 hypothalamus .a 3107 to 3568 1 to 462     Submitted on the opposite strand 462/462
(100 %)
18 diff
(96.2 %id)
DB576539 hypothalamus .a 3109 to 3568 1 to 460     Submitted on the opposite strand 460/460
(100 %)
1 diff
(99.8 %id)
CN261791 embryonic stem cells, cell lines H1, H7, andH9 .b 1 to 670 7 to 676   tiling clone,   676/676
(100 %)
4 diff
(99.5 %id)
BE898276 adenocarcinoma cell line, ovary .b 1 to 774 3 to 766       766/773
(99 %)
11 diff
(98.6 %id)
BE395589 endometrium, adenocarcinoma cell line, uterus .b 22 to 700 1 to 674       674/682
(98 %)
16 diff
(97.7 %id)
BU928419 brain, glioblastoma .b 562 to 1287 1 to 732   tiling clone,   732/810
(90 %)
19 diff
(97.7 %id)
BE737736 brain, glioblastoma .b 585 to 1176 1 to 570   tiling clone,   570/814
(70 %)
30 diff
(96.4 %id)
BE737910 brain, glioblastoma .b 585 to 1255 1 to 665   tiling clone,   665/831
(80 %)
27 diff
(96.8 %id)
BF978230 melanotic melanoma, high MDR, skin .b 591 to 1166 1 to 575   tiling clone,   575/830
(69 %)
23 diff
(97.3 %id)
T51661 fetal spleen, Spleen .c 1 to 416 1 to 416   tiling clone,   416/420
(99 %)
20 diff
(95.3 %id)
BE742425 adenocarcinoma cell line, ovary .c 156 to 955 1 to 794 F19L V20S S21P S22Q A23Q ... tiling clone,   794/849
(93 %)
23 diff
(97.3 %id)
AA884494 pooled .c 192 to 763 1 to 570     Submitted on the opposite strand 570/571
(99 %)
3 diff
(99.5 %id)
BF063578 colon, colon tumor, RER+ .c 192 to 712 1 to 521   tiling clone, Submitted on the opposite strand 521/521
(100 %)
0 diff
(100 %id)
AA287791 germinal center B cell .c 315 to 810 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
W28275 eye, retina .c 317 to 816 1 to 502   tiling clone,   502/552
(90 %)
13 diff
(97.7 %id)
BG682213 skin, squamous cell carcinoma .c 409 to 673 1 to 265       265/265
(100 %)
0 diff
(100 %id)
T51514 fetal spleen, Spleen .c 763 to 1074 314 to 1   tiling clone,   314/316
(99 %)
4 diff
(98.8 %id)
AA885304 pooled .d 1 to 471 1 to 469     Submitted on the opposite strand 469/469
(100 %)
3 diff
(99.4 %id)
AA947288 pooled .d 1 to 457 1 to 457 I117M L120V tiling clone, Submitted on the opposite strand 457/457
(100 %)
2 diff
(99.6 %id)
AI094457 pooled .d 1 to 346 1 to 342     Submitted on the opposite strand 342/342
(100 %)
4 diff
(98.9 %id)
DA572920 whole embryo, mainly body .d 386 to 749 321 to 684   tiling clone, capped   364/683
(53 %)
6 diff
(99.2 %id)
BG496322 lung, mucoepidermoid carcinoma .d 459 to 1222 1 to 762       762/762
(100 %)
14 diff
(98.2 %id)
BQ101107 Islets of Langerhans, Pancreas .d 486 to 989 1 to 504   tiling clone, fully sequenced,   504/504
(100 %)
0 diff
(100 %id)
CF272237 Brain glioblastoma .d 514 to 1394 897 to 8     Submitted on the opposite strand 890/899
(98 %)
0 diff
(100 %id)
BP265058 brain .d 560 to 1231 1 to 679       679/867
(78 %)
23 diff
(97.4 %id)
CV811945 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .d 566 to 1380 840 to 24   AAA Submitted on the opposite strand 817/857
(95 %)
29 diff
(96.7 %id)
CF243175 Brain glioblastoma .d 570 to 1392 854 to 26   AAA Submitted on the opposite strand 829/830
(99 %)
11 diff
(98.7 %id)
BQ420652 embryonal carcinoma, cell line, testis .d 579 to 1395 878 to 43   AAA Submitted on the opposite strand 836/842
(99 %)
28 diff
(96.7 %id)
R24221 placenta .d 598 to 920 1 to 329       329/339
(97 %)
7 diff
(98.0 %id)
BG619786 placenta .d 628 to 1243 1 to 620       620/620
(100 %)
4 diff
(99.4 %id)
BU608699 Human Lung Epithelial cells, lung .d 641 to 1398 774 to 19   AAA   756/767
(98 %)
3 diff
(99.7 %id)
BE778924 eye, retinoblastoma .d 684 to 1385 709 to 1     Submitted on the opposite strand 709/1003
(70 %)
32 diff
(96.9 %id)
BG112280 Bone, osteosarcoma, cell line .d 693 to 1397 1 to 701       701/780
(89 %)
9 diff
(98.9 %id)
BF571881 melanotic melanoma, high MDR, skin .d 704 to 1235 1 to 525       525/777
(67 %)
7 diff
(99.1 %id)
BF978383 melanotic melanoma, high MDR, skin .d 704 to 1374 1 to 675       675/972
(69 %)
34 diff
(96.6 %id)
BP292905 lung .d 746 to 1327 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AU253829 neuroblastoma .d 781 to 1396 618 to 5       614/618
(99 %)
0 diff
(100 %id)
BE738495 brain, glioblastoma .d 788 to 1571 783 to 3   tiling clone,   781/928
(84 %)
0 diff
(100 %id)
ES309694 occipital hair of pubic hypotrichosispatient, skin .d 810 to 1389 606 to 29     Submitted on the opposite strand 578/707
(81 %)
0 diff
(100 %id)
DB360031 whole embryo, mainly body .d 819 to 1395 578 to 1       578/580
(99 %)
7 diff
(98.8 %id)
BE738367 brain, glioblastoma .d 820 to 1567 772 to 1       772/862
(89 %)
14 diff
(98.4 %id)
CN261790 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 851 to 1353 503 to 1     Submitted on the opposite strand 503/503
(100 %)
0 diff
(100 %id)
AW316843 adenocarcinoma, Pancreas .d 851 to 1396 546 to 3       544/546
(99 %)
0 diff
(100 %id)
BP326400 prostata .d 892 to 1343 1 to 449       449/576
(77 %)
13 diff
(97.8 %id)
DB575758 hypothalamus .d 907 to 1398 1 to 492     Submitted on the opposite strand 492/492
(100 %)
1 diff
(99.8 %id)
DB522152 testis .d 913 to 1395 1 to 483     Submitted on the opposite strand 483/483
(100 %)
0 diff
(100 %id)
AI554076 pooled .d 915 to 1394 480 to 1       480/480
(100 %)
0 diff
(100 %id)
DB574335 hypothalamus .d 923 to 1380 1 to 458     Submitted on the opposite strand 458/458
(100 %)
0 diff
(100 %id)
DB543221 hippocampus .d 924 to 1398 1 to 475     Submitted on the opposite strand 475/475
(100 %)
1 diff
(99.8 %id)
BM144777 leukopheresis .d 934 to 1395 478 to 17   AAA   462/462
(100 %)
0 diff
(100 %id)
C05729   .d 959 to 1362 404 to 1       404/404
(100 %)
4 diff
(99.1 %id)
BQ100815 Islets of Langerhans, Pancreas .d 959 to 1498 540 to 1   tiling clone, fully sequenced,   540/540
(100 %)
0 diff
(100 %id)
AW572456 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 962 to 1395 434 to 1       434/434
(100 %)
0 diff
(100 %id)
BE894981 melanotic melanoma, skin .d 967 to 1660 1 to 695   tiling clone,   695/879
(79 %)
20 diff
(97.8 %id)
BE139521 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 970 to 1393 437 to 14   AAA   424/424
(100 %)
0 diff
(100 %id)
BP277047 Kidney .d 990 to 1394 1 to 405       405/562
(72 %)
3 diff
(99.5 %id)
AA283121 ovarian tumor, ovary .d 993 to 1393 401 to 1       401/401
(100 %)
0 diff
(100 %id)
AA223546 brain, neuroepithelial cells .d 1002 to 1249 248 to 1       248/248
(100 %)
0 diff
(100 %id)
AA136748 uterus .d 1013 to 1396 390 to 2     Submitted on the opposite strand 389/395
(98 %)
0 diff
(100 %id)
AA287059 germinal center B cell .d 1019 to 1393 375 to 1       375/375
(100 %)
0 diff
(100 %id)
R24222 placenta .d 1106 to 1399 307 to 7       301/308
(97 %)
0 diff
(100 %id)
AW976780   .e 1 to 401 7 to 407 C110W tiling clone,   401/408
(98 %)
2 diff
(99.6 %id)
AW977142   .e 1 to 493 7 to 498 D95I N96T K97S P98H L99S ...     492/505
(97 %)
4 diff
(99.3 %id)
AI827565 pooled .e 42 to 585 1 to 544   tiling clone, Submitted on the opposite strand 544/544
(100 %)
1 diff
(99.9 %id)
AA749381 germinal center B cell .e 50 to 331 1 to 282     Submitted on the opposite strand 282/282
(100 %)
0 diff
(100 %id)
R85502 eye, retina .e 56 to 460 1 to 419     Submitted on the opposite strand 419/420
(99 %)
21 diff
(95.0 %id)
AA731933 germinal center B cell .e 86 to 317 1 to 234     Submitted on the opposite strand 234/234
(100 %)
4 diff
(98.3 %id)
AA814421 germinal center B cell .e 153 to 393 1 to 241     Submitted on the opposite strand 241/241
(100 %)
3 diff
(98.8 %id)
BI599259 brain, hypothalamus .f 1 to 755 6 to 762 G43W D44R I46Y K47Q E48R ... tiling clone,   757/765
(98 %)
29 diff
(96.3 %id)
TI_45212109   .f 1 to 755 90 to 846 G43W D44R I46Y K47Q E48R ...     757/849
(89 %)
32 diff
(96.3 %id)
BF211831 bone marrow, from chronic myelogenous leukemia .f 322 to 895 1 to 570   tiling clone,   570/864
(65 %)
16 diff
(98.2 %id)
CR737593 liver and spleen .g 1 to 532 1 to 530 D16T F17S T18P F19L V20S ... tiling clone,   530/542
(97 %)
3 diff
(99.5 %id)
W05176 liver and spleen .g 1 to 358 1 to 355   fully sequenced,   355/355
(100 %)
12 diff
(96.7 %id)
AV656854 corresponding non cancerous liver tissue .g 3 to 405 1 to 403     Submitted on the opposite strand 403/403
(100 %)
3 diff
(99.3 %id)
DA488159 brain .g 7 to 259 2 to 255   capped   254/254
(100 %)
1 diff
(99.7 %id)
DA547845   .g 7 to 281 2 to 276   capped   275/275
(100 %)
0 diff
(100 %id)
DA662260   .g 7 to 382 2 to 377   capped   376/378
(99 %)
2 diff
(99.5 %id)
CB123136 Liver .g 8 to 386 1 to 379       379/379
(100 %)
0 diff
(100 %id)
BQ100705 Islets of Langerhans, Pancreas .g 14 to 117 104 to 1       104/110
(94 %)
3 diff
(97.3 %id)
BQ100982 Islets of Langerhans, Pancreas .g 20 to 152 1 to 133       133/133
(100 %)
0 diff
(100 %id)
CK823051 Islets of Langerhans, Pancreas .g 20 to 152 1 to 133       133/133
(100 %)
0 diff
(100 %id)
AI738476 colon, colon tumor, RER+ .g 27 to 160 134 to 1       134/134
(100 %)
0 diff
(100 %id)
CN261797 embryonic stem cells, cell lines H1, H7, andH9 .g 31 to 395 1 to 365   tiling clone,   365/365
(100 %)
0 diff
(100 %id)
BF594359 colon, colon tumor, RER+ .g 33 to 159 127 to 1       127/127
(100 %)
0 diff
(100 %id)
BF063810 colon, colon tumor, RER+ .g 194 to 456 1 to 263     Submitted on the opposite strand 263/327
(80 %)
12 diff
(96.4 %id)
N75944 liver and spleen .g 328 to 788 467 to 1   tiling clone, fully sequenced,   465/465
(100 %)
11 diff
(97.7 %id)
BG434235 placenta .h-u 1 to 271 1 to 271 exact tiling clone, AAA   271/271
(100 %)
0 diff
(100 %id)
DB301325 amygdala Gene YIPF4, variant not shown         This clone was ignored    
DA143825 amygdala Gene YIPF4, variant not shown       capped This clone was ignored    
AV692078 hepatocellular carcinoma Gene YIPF4, variant not shown         Suspected internal deletion, this clone was ignored    
AV657226 corresponding non cancerous liver tissue Gene YIPF4, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
DB360044.
matches multiple genes
whole embryo, mainly body Gene YIPF4, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene jofa    
DB360044.
matches multiple genes
whole embryo, mainly body Gene jofa, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene jofa    
DA572930.
matches multiple genes
whole embryo, mainly body Gene YIPF4, variant not shown       capped Suspected internal deletion, this clone was ignored, also hits gene jofa    
DA572930.
matches multiple genes
whole embryo, mainly body Gene jofa, variant not shown       capped Suspected internal deletion, this clone was ignored, also hits gene jofa    
N70879 lung Gene YIPF4, variant not shown         This clone was ignored    
W06881 lung Gene YIPF4, variant not shown         This clone was ignored    
AA775400 whole brain Gene YIPF4, variant not shown         This clone was ignored    
AA670303 whole brain Gene YIPF4, variant not shown         Suspected internal deletion, suspected internal deletion, suspected internal deletion, this clone was ignored    
BM802858.
matches multiple genes
eye, retinoblastoma Gene YIPF4, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene jofa    
BM802858.
matches multiple genes
eye, retinoblastoma Gene jofa, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene jofa    
BQ777606 Pancreas, Purified pancreatic islet Gene YIPF4, variant not shown       fully sequenced, This clone was ignored    
BQ777907 Pancreas, Purified pancreatic islet Gene YIPF4, variant not shown       fully sequenced, This clone was ignored    
CD172353 White Matter Gene YIPF4, variant not shown         This clone was ignored    
CK001676.
matches multiple genes
brain/CNS, Bulk tissue from Human Spinal cord Gene YIPF4, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene jofa    
CK001676.
matches multiple genes
brain/CNS, Bulk tissue from Human Spinal cord Gene jofa, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene jofa    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI