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Gene CCDC130TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
357 supporting clones for gene CCDC130 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI913255 brain .a -9 to 890 1 to 900   tiling clone,   900/911
(98 %)
16 diff
(98.3 %id)
TI_57241223   .a -9 to 890 32 to 931       900/942
(95 %)
21 diff
(97.8 %id)
TI_154102466   .a 745 to 1459 802 to 90   AAA   713/781
(91 %)
20 diff
(97.5 %id)
BM982198 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 761 to 1459 717 to 19   tiling clone, AAA   699/699
(100 %)
0 diff
(100 %id)
BQ772075 Chondrosarcoma Grade II, Left Pelvis .a 761 to 1464 721 to 19   AAA   703/703
(100 %)
1 diff
(99.9 %id)
CD367699 Alveolar Macrophage, lung .a 761 to 1457 715 to 19   AAA   697/697
(100 %)
0 diff
(100 %id)
AL548091 placenta, Placenta Cot 25-normalized .a 773 to 1456 1 to 685   fully sequenced,   685/685
(100 %)
2 diff
(99.8 %id)
CK826290 insulinoma, Pancreas .a 798 to 1446 648 to 1       648/648
(100 %)
4 diff
(99.4 %id)
CA432670 cell lines, Chondrosarcoma .a 822 to 1457 654 to 19   AAA   636/636
(100 %)
2 diff
(99.7 %id)
CA307565 Alveolar Macrophage, lung .a 827 to 1457 649 to 19   AAA   631/631
(100 %)
0 diff
(100 %id)
CA309351 Alveolar Macrophage, lung .a 863 to 1457 613 to 19   AAA   595/595
(100 %)
0 diff
(100 %id)
BU733935 eye, Retina Foveal and Macular .a 881 to 1459 597 to 19   AAA   579/579
(100 %)
1 diff
(99.9 %id)
TI_154132137   .a 887 to 1457 683 to 111   AAA   573/815
(70 %)
5 diff
(99.4 %id)
CA423592 cell lines, Chondrosarcoma .a 902 to 1458 575 to 19   AAA   557/557
(100 %)
3 diff
(99.5 %id)
CA445543 Chondrosarcoma, Left Pubic Bone .a 907 to 1459 571 to 19   AAA   553/553
(100 %)
0 diff
(100 %id)
BQ548738 insulinoma, Pancreas .a 908 to 1449 542 to 1       542/542
(100 %)
0 diff
(100 %id)
D52752   .a 917 to 1225 1 to 309       309/309
(100 %)
4 diff
(98.8 %id)
D54139   .a 917 to 1234 1 to 319       319/319
(100 %)
1 diff
(99.7 %id)
AW976896   .a 918 to 1459 545 to 3     Submitted on the opposite strand 543/545
(99 %)
0 diff
(100 %id)
BI012647 lung_tumor .a 923 to 1376 456 to 1       456/456
(100 %)
7 diff
(98.5 %id)
BU608450 Human Lung Epithelial cells, lung .a 923 to 1462 557 to 19   AAA   539/539
(100 %)
1 diff
(99.9 %id)
BF900420 marrow .a 925 to 1088 1 to 160       160/161
(99 %)
13 diff
(92.0 %id)
BF111977 pooled .a 993 to 1459 470 to 4       467/470
(99 %)
0 diff
(100 %id)
AA604119 adrenal adenoma, adrenal gland .a 997 to 1462 469 to 4       466/469
(99 %)
0 diff
(100 %id)
AI814549 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1001 to 1458 458 to 1       458/458
(100 %)
0 diff
(100 %id)
AI623686 adenocarcinoma, Pancreas .a 1003 to 1457 456 to 2       455/456
(99 %)
0 diff
(100 %id)
AI091724 pooled .a 1004 to 1459 459 to 4       456/459
(99 %)
0 diff
(100 %id)
AA604100 adrenal adenoma, adrenal gland .a 1008 to 1462 458 to 4       455/458
(99 %)
0 diff
(100 %id)
BF935643 nervous_tumor .a 1009 to 1356 347 to 1     Submitted on the opposite strand 347/347
(100 %)
3 diff
(99.2 %id)
BF935656 nervous_tumor .a 1009 to 1356 347 to 1     Submitted on the opposite strand 347/347
(100 %)
3 diff
(99.2 %id)
BM695352 eye, optic nerve .a 1014 to 1460 44 to 490       447/490
(91 %)
6 diff
(98.8 %id)
AI583237 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1015 to 1457 450 to 8       443/450
(98 %)
0 diff
(100 %id)
AI056967 liver and spleen .a 1016 to 1457 442 to 1       442/442
(100 %)
0 diff
(100 %id)
AA419083 ovarian tumor, ovary .a 1034 to 1459 1 to 422       422/422
(100 %)
7 diff
(98.4 %id)
DB510629 testis .a 1045 to 1457 1 to 410   AAA Submitted on the opposite strand 410/410
(100 %)
21 diff
(94.9 %id)
AI362867 anaplastic oligodendroglioma, brain .a 1047 to 1457 415 to 5       411/415
(99 %)
0 diff
(100 %id)
AW058643 pooled .a 1053 to 1459 411 to 4       408/411
(99 %)
0 diff
(100 %id)
AW029279 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 1055 to 1458 417 to 14   AAA   404/404
(100 %)
4 diff
(99.1 %id)
AA838355 epithelium (cell line), Prostate .a 1056 to 1458 412 to 11       402/412
(97 %)
0 diff
(100 %id)
AA632880 thyroid .a 1059 to 1260 202 to 1       202/202
(100 %)
0 diff
(100 %id)
AI702057 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1066 to 1460 395 to 1       395/395
(100 %)
0 diff
(100 %id)
AI812087 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1066 to 1457 406 to 15   AAA   392/392
(100 %)
1 diff
(99.8 %id)
AA999958 Kidney .a 1068 to 1460 387 to 1       387/387
(100 %)
6 diff
(98.5 %id)
BM463195 melanotic melanoma, skin .a 1074 to 1457 13 to 396   AAA   384/396
(96 %)
6 diff
(98.5 %id)
BE219574 carcinoid, lung .a 1082 to 1457 376 to 1       376/376
(100 %)
1 diff
(99.8 %id)
AI769033 pooled .a 1086 to 1459 377 to 4       374/377
(99 %)
0 diff
(100 %id)
AL548057 placenta, Placenta Cot 25-normalized .a 1091 to 1422 334 to 1   fully sequenced,   334/334
(100 %)
4 diff
(98.9 %id)
AA479740 ovarian tumor, ovary .a 1091 to 1459 383 to 15   AAA   369/369
(100 %)
0 diff
(100 %id)
AA939093 carcinoid, lung .a 1091 to 1456 373 to 8       366/373
(98 %)
0 diff
(100 %id)
AI248906 liver and spleen .a 1091 to 1457 367 to 1       367/367
(100 %)
0 diff
(100 %id)
AA761353 germinal center B cell .a 1092 to 1260 169 to 1       169/169
(100 %)
2 diff
(98.9 %id)
CN261285 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1094 to 1402 1 to 309       309/309
(100 %)
2 diff
(99.4 %id)
AA843956 parathyroid gland, parathyroid tumor .a 1094 to 1458 391 to 26   AAA   366/366
(100 %)
1 diff
(99.8 %id)
EC516862 Prostate .a 1103 to 1192 21 to 115       95/115
(82 %)
6 diff
(94.8 %id)
BE673169 Prostate .a 1108 to 1459 353 to 2       352/353
(99 %)
0 diff
(100 %id)
BM724906 eye, fetal eye .a 1125 to 1457 1 to 333   AAA   333/333
(100 %)
0 diff
(100 %id)
AA774486 heart .a 1132 to 1457 329 to 4       326/329
(99 %)
0 diff
(100 %id)
AA281789 germinal center B cell .a 1146 to 1459 317 to 1       317/317
(100 %)
4 diff
(98.8 %id)
AW779010 colon, moderately-differentiated adenocarcinoma .a 1158 to 1459 311 to 10       302/313
(96 %)
0 diff
(100 %id)
H45418 breast .a 1166 to 1431 266 to 1       266/266
(100 %)
1 diff
(99.7 %id)
AA716666 heart .a 1168 to 1457 300 to 12   AAA   289/289
(100 %)
1 diff
(99.7 %id)
AA716706 heart .a 1178 to 1457 291 to 12   AAA   280/280
(100 %)
0 diff
(100 %id)
AA411051 ovarian tumor, ovary .a 1178 to 1459 296 to 15   AAA   282/282
(100 %)
0 diff
(100 %id)
AA425907 ovarian tumor, ovary .a 1186 to 1459 288 to 15   AAA   274/274
(100 %)
0 diff
(100 %id)
AI369992   .a 1186 to 1460 282 to 6       277/282
(98 %)
0 diff
(100 %id)
AA480850 ovarian tumor, ovary .a 1187 to 1466 14 to 293   fully sequenced, AAA   280/293
(95 %)
6 diff
(98.0 %id)
BF941286 dorsal root ganglia .a 1224 to 1465 255 to 14   AAA   242/242
(100 %)
1 diff
(99.6 %id)
AI984725 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1253 to 1466 214 to 1       214/214
(100 %)
0 diff
(100 %id)
AW138105   .a 1259 to 1457 216 to 18   AAA   199/199
(100 %)
1 diff
(99.5 %id)
AA457738 ovarian tumor, ovary .a 1266 to 1466 201 to 1   fully sequenced,   201/201
(100 %)
0 diff
(100 %id)
AW473409 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1270 to 1457 188 to 1       188/188
(100 %)
0 diff
(100 %id)
EC441814 Prostate .a 1286 to 1382 1 to 102       102/102
(100 %)
6 diff
(94.2 %id)
AI217261   .a 1297 to 1457 164 to 4       161/164
(98 %)
0 diff
(100 %id)
AA401190 ovarian tumor, ovary .a 1335 to 1466 133 to 1       133/133
(100 %)
1 diff
(99.3 %id)
EC556942 Prostate .a 1370 to 1489 1 to 118   tiling clone,   118/118
(100 %)
6 diff
(95.0 %id)
CR620805 B cells (Ramos cell line) Cot 25-normalized .b 1 to 1857 2 to 1858 exact tiling clone,   1858/1858
(100 %)
0 diff
(100 %id)
AL560878 B cells from Burkitt lymphoma .b 1 to 898 2 to 897   fully sequenced,   897/897
(100 %)
6 diff
(99.4 %id)
BX462428 T cells (Jurkat cell line) .b 7 to 1024 1 to 1012       1012/1030
(98 %)
60 diff
(94.2 %id)
DN994031 brain, whole brain .b 26 to 701 21 to 696       676/703
(96 %)
8 diff
(98.9 %id)
BI517773 pooled colon, kidney, stomach .b 298 to 1132 1 to 828       828/830
(99 %)
12 diff
(98.6 %id)
BM545683 ovary (pool of 3) .b 299 to 1084 112 to 899       788/1159
(67 %)
18 diff
(98.5 %id)
BU174357 ductal carcinoma, cell line, Pancreas .b 299 to 951 8 to 666       659/869
(75 %)
22 diff
(97.5 %id)
BU163382 ductal carcinoma, cell line, Pancreas .b 299 to 1111 15 to 829       815/893
(91 %)
14 diff
(98.5 %id)
BQ687383 ductal carcinoma, cell line, Pancreas .b 299 to 1076 8 to 789       782/844
(92 %)
22 diff
(97.4 %id)
TI_45236174   .b 299 to 1132 70 to 896       827/898
(92 %)
15 diff
(98.4 %id)
BU185636 ductal carcinoma, cell line, Pancreas .b 300 to 1076 8 to 786       779/907
(85 %)
20 diff
(97.8 %id)
BU190802 ductal carcinoma, cell line, Pancreas .b 300 to 1214 8 to 929       922/969
(95 %)
22 diff
(97.8 %id)
BQ894880 ductal carcinoma, cell line, Pancreas .b 300 to 1159 8 to 871       864/1006
(85 %)
26 diff
(97.5 %id)
BQ897071 ductal carcinoma, cell line, Pancreas .b 300 to 1159 8 to 870   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 863/870
(99 %)
20 diff
(97.8 %id)
BU158091 ductal carcinoma, cell line, Pancreas .b 300 to 1076 8 to 788   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 781/905
(86 %)
23 diff
(97.5 %id)
BQ892907 ductal carcinoma, cell line, Pancreas .b 300 to 1154 8 to 869       862/874
(98 %)
20 diff
(97.8 %id)
BQ687037 ductal carcinoma, cell line, Pancreas .b 300 to 1076 8 to 790   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 783/864
(90 %)
19 diff
(97.9 %id)
BQ691274 ductal carcinoma, cell line, Pancreas .b 300 to 1054 8 to 764       757/926
(81 %)
16 diff
(98.3 %id)
BQ691475 ductal carcinoma, cell line, Pancreas .b 300 to 1211 8 to 927       920/927
(99 %)
34 diff
(96.4 %id)
BQ687848 ductal carcinoma, cell line, Pancreas .b 300 to 1192 8 to 909       900/909
(99 %)
45 diff
(95.1 %id)
BU174285 ductal carcinoma, cell line, Pancreas .b 301 to 1027 9 to 745       737/932
(79 %)
51 diff
(94.6 %id)
BQ687277 ductal carcinoma, cell line, Pancreas .b 302 to 1076 10 to 786       777/900
(86 %)
14 diff
(98.5 %id)
BQ878712 ductal carcinoma, cell line, Pancreas .b 304 to 1100 11 to 810       800/860
(93 %)
10 diff
(98.9 %id)
BQ684962 ductal carcinoma, cell line, Pancreas .b 304 to 999 34 to 737   AAA   704/846
(83 %)
19 diff
(97.8 %id)
BQ687055 ductal carcinoma, cell line, Pancreas .b 304 to 1041 1 to 743       743/871
(85 %)
18 diff
(98.0 %id)
BE791831 lung, small cell carcinoma .b 305 to 1068 1 to 755       755/967
(78 %)
15 diff
(98.5 %id)
BU169101 ductal carcinoma, cell line, Pancreas .b 305 to 1132 12 to 842       831/842
(98 %)
18 diff
(97.9 %id)
BQ678874 melanotic melanoma, cell line, skin .b 312 to 1014 1 to 705       705/946
(74 %)
28 diff
(97.1 %id)
BI261570 lymph, lymphoma, cell line .b 341 to 1109 1 to 761       761/768
(99 %)
23 diff
(97.1 %id)
BQ054684 lymph, lymphoma, cell line .b 344 to 1209 1 to 878       878/1050
(83 %)
22 diff
(98.0 %id)
BQ054780 lymph, lymphoma, cell line .b 344 to 1212 1 to 884       882/1073
(82 %)
34 diff
(96.9 %id)
BQ057717 lymph, lymphoma, cell line .b 344 to 1159 1 to 826       826/991
(83 %)
11 diff
(98.9 %id)
BQ064341 lymph, lymphoma, cell line .b 344 to 1194 1 to 858       858/954
(89 %)
16 diff
(98.4 %id)
BQ064899 lymph, lymphoma, cell line .b 344 to 1212 1 to 869       869/994
(87 %)
15 diff
(98.5 %id)
BE019646 carcinoma cell line, cervix .b 469 to 980 1 to 512     Submitted on the opposite strand 512/512
(100 %)
0 diff
(100 %id)
CV026450 mixed .b 503 to 1170 1 to 661       661/672
(98 %)
10 diff
(98.6 %id)
TI_1948126115   .b 505 to 1160 128 to 783   fully sequenced,   656/783
(83 %)
6 diff
(99.3 %id)
TI_1948126261   .b 505 to 1108 130 to 733   fully sequenced,   604/733
(82 %)
6 diff
(99.2 %id)
TI_1948126421   .b 505 to 1004 130 to 629   fully sequenced,   500/629
(79 %)
5 diff
(99.3 %id)
TI_1948126563   .b 505 to 1160 132 to 787   fully sequenced,   656/787
(83 %)
6 diff
(99.3 %id)
CD245645 White Matter .b 619 to 1214 1 to 597       597/915
(65 %)
13 diff
(98.6 %id)
BM745787 stomach .b 682 to 1284 1 to 602       602/602
(100 %)
2 diff
(99.7 %id)
BM753813 stomach .b 682 to 1165 1 to 484       484/484
(100 %)
0 diff
(100 %id)
BM765302 stomach .b 682 to 1335 1 to 653       653/653
(100 %)
1 diff
(99.9 %id)
BM765310 stomach .b 682 to 1378 1 to 696       696/696
(100 %)
1 diff
(99.9 %id)
BM765812 stomach .b 682 to 1286 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
BM765596 stomach .b 682 to 1286 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
BM766091 stomach .b 682 to 1203 1 to 521       521/532
(97 %)
1 diff
(99.9 %id)
BM765960 stomach .b 682 to 1089 1 to 408       408/408
(100 %)
0 diff
(100 %id)
BM771958 stomach .b 682 to 1274 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
BM771599 stomach .b 682 to 1263 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BM771757 stomach .b 698 to 1317 17 to 635       619/635
(97 %)
10 diff
(98.5 %id)
BM834654 stomach .b 712 to 1038 1 to 327       327/327
(100 %)
0 diff
(100 %id)
BM753129 stomach .b 736 to 994 1 to 259       259/259
(100 %)
1 diff
(99.7 %id)
BF970973 adrenal cortex carcinoma, cell line, adrenal gland .b 757 to 1441 1 to 686       686/689
(99 %)
8 diff
(98.9 %id)
BG005355 placenta_normal .b 817 to 1069 1 to 262       262/264
(99 %)
20 diff
(92.5 %id)
AL582215 B cells from Burkitt lymphoma .b 872 to 1857 980 to 1   fully sequenced,   980/980
(100 %)
16 diff
(98.4 %id)
TI_1948126422   .b 974 to 1692 843 to 124   fully sequenced,   720/843
(85 %)
2 diff
(99.8 %id)
TI_1948126262   .b 1078 to 1692 739 to 125   fully sequenced,   615/739
(83 %)
0 diff
(100 %id)
TI_1948126116   .b 1130 to 1692 687 to 125   fully sequenced,   563/687
(81 %)
0 diff
(100 %id)
TI_1948126564   .b 1130 to 1692 687 to 125   fully sequenced,   563/687
(81 %)
0 diff
(100 %id)
BI262198 lymph, lymphoma, cell line .b 1370 to 1844 498 to 25       474/498
(95 %)
0 diff
(100 %id)
TI_57217291   .c 1 to 859 60 to 918   tiling clone, AAA   859/941
(91 %)
10 diff
(99.0 %id)
TI_57243726   .c 5 to 745 24 to 764       741/764
(96 %)
6 diff
(99.3 %id)
BI754793 brain .c 6 to 859 1 to 854       854/891
(95 %)
4 diff
(99.6 %id)
BI917691 brain .c 11 to 745 1 to 735       735/735
(100 %)
0 diff
(100 %id)
BI160125 epithelioid carcinoma cell line, Pancreas .c 16 to 858 1 to 848       848/854
(99 %)
28 diff
(96.8 %id)
AK098262 uterus .c 36 to 1700 1 to 1665 A206V available from FLJ,   1665/1665
(100 %)
1 diff
(100.0 %id)
CR598416 Neuroblastoma Cot 25-normalized .c 44 to 1591 1 to 1548 exact     1548/1548
(100 %)
0 diff
(100 %id)
AL524192 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 44 to 943 1 to 898   fully sequenced,   898/898
(100 %)
1 diff
(99.9 %id)
TI_45235883   .c 47 to 802 59 to 812       754/812
(92 %)
7 diff
(99.2 %id)
BI822913 pooled brain, lung, testis .c 48 to 970 1 to 925       925/1108
(83 %)
24 diff
(97.9 %id)
BI761015 pooled colon, kidney, stomach .c 48 to 942 1 to 895       895/896
(99 %)
20 diff
(97.8 %id)
TI_57202110   .c 48 to 970 34 to 958       925/1141
(81 %)
29 diff
(97.5 %id)
TI_57150815   .c 48 to 942 29 to 923       895/924
(96 %)
25 diff
(97.3 %id)
BI911899 leukocyte .c 50 to 819 28 to 798       771/799
(96 %)
10 diff
(98.8 %id)
TI_57232624   .c 50 to 819 28 to 798       771/799
(96 %)
10 diff
(98.8 %id)
BI517528 pooled colon, kidney, stomach .c 54 to 802 1 to 747       747/747
(100 %)
2 diff
(99.8 %id)
CX753213 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 55 to 828 1 to 766     Submitted on the opposite strand 766/769
(99 %)
13 diff
(98.4 %id)
TI_57243483   .c 55 to 894 28 to 869       842/900
(93 %)
17 diff
(98.2 %id)
BX355460 Neuroblastoma Cot 50-normalized .c 57 to 1179 16 to 1144       1129/1154
(97 %)
38 diff
(96.8 %id)
BI088970 cervix .c 57 to 799 1 to 743       743/743
(100 %)
3 diff
(99.6 %id)
TI_57218126   .c 57 to 888 64 to 896       833/896
(92 %)
18 diff
(98.0 %id)
TI_57181529   .c 57 to 859 65 to 868       804/870
(92 %)
10 diff
(98.9 %id)
BI752378 brain .c 58 to 888 1 to 832       832/832
(100 %)
12 diff
(98.6 %id)
BI768867 pooled lung and spleen .c 58 to 859 1 to 803       803/805
(99 %)
4 diff
(99.6 %id)
BI913914 brain .c 59 to 894 1 to 838       838/869
(96 %)
10 diff
(98.9 %id)
BM921598 pooled brain, lung, testis .c 62 to 991 20 to 960       941/1101
(85 %)
35 diff
(96.9 %id)
AF250306   .c 65 to 1697 1 to 1633 exact tiling clone, AAA   1633/1633
(100 %)
0 diff
(100 %id)
BM909373 lymph, lymphoma, cell line .c 65 to 974 1 to 926       926/1071
(86 %)
25 diff
(97.7 %id)
BQ642569 lymph, lymphoma, cell line .c 65 to 980 1 to 917       917/919
(99 %)
16 diff
(98.3 %id)
BF791684 adrenal cortex carcinoma, cell line, adrenal gland .c 66 to 829 1 to 768       768/1117
(68 %)
11 diff
(99.1 %id)
BM471074 melanotic melanoma, skin .c 66 to 1045 13 to 986       974/986
(98 %)
31 diff
(96.9 %id)
BU197087 ductal carcinoma, cell line, Pancreas .c 66 to 859 2 to 796       795/893
(89 %)
16 diff
(98.3 %id)
BU196599 ductal carcinoma, cell line, Pancreas .c 66 to 991 5 to 939       935/967
(96 %)
37 diff
(96.2 %id)
BQ689362 ductal carcinoma, cell line, Pancreas .c 66 to 960 18 to 916       899/917
(98 %)
28 diff
(97.0 %id)
BC002905 Lung, small cell carcinoma .c 69 to 1700 1 to 1632 exact available from MGC, AAA   1632/1632
(100 %)
0 diff
(100 %id)
F11732 brain, total brain .c 69 to 370 1 to 302       302/302
(100 %)
1 diff
(99.7 %id)
NM_030818.2   .c 69 to 1700 1 to 1632 exact RefSeq, AAA   1632/1632
(100 %)
0 diff
(100 %id)
BU185779 ductal carcinoma, cell line, Pancreas .c 72 to 836 23 to 790       768/895
(85 %)
20 diff
(97.8 %id)
BU196976 ductal carcinoma, cell line, Pancreas .c 72 to 994 21 to 950       930/978
(95 %)
31 diff
(96.9 %id)
BU157520 ductal carcinoma, cell line, Pancreas .c 72 to 862 7 to 803   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 797/931
(85 %)
9 diff
(99.1 %id)
BU146277 ductal carcinoma, cell line, Pancreas .c 72 to 836 25 to 794       770/890
(86 %)
10 diff
(98.9 %id)
BU150561 ductal carcinoma, cell line, Pancreas .c 72 to 862 1 to 793   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 793/907
(87 %)
14 diff
(98.5 %id)
TI_59395010   .c 72 to 859 112 to 905       794/806
(98 %)
13 diff
(98.4 %id)
TI_59395729   .c 72 to 768 61 to 758       698/698
(100 %)
1 diff
(99.9 %id)
TI_59395847   .c 72 to 745 59 to 732       674/674
(100 %)
0 diff
(100 %id)
TI_59395876   .c 72 to 859 60 to 855       796/824
(96 %)
12 diff
(98.6 %id)
BM006350 ductal carcinoma, cell line, Pancreas .c 73 to 859 1 to 793       793/805
(98 %)
13 diff
(98.4 %id)
BM006601 ductal carcinoma, cell line, Pancreas .c 73 to 768 1 to 697       697/697
(100 %)
1 diff
(99.9 %id)
BM006742 ductal carcinoma, cell line, Pancreas .c 73 to 745 1 to 673       673/673
(100 %)
0 diff
(100 %id)
BM006757 ductal carcinoma, cell line, Pancreas .c 73 to 859 1 to 795       795/823
(96 %)
12 diff
(98.6 %id)
BM920684 pooled brain, lung, testis .c 74 to 994 1 to 928       928/1036
(89 %)
10 diff
(99.1 %id)
BU196379 ductal carcinoma, cell line, Pancreas .c 75 to 1079 1 to 1003       1001/1008
(99 %)
10 diff
(99.1 %id)
BU185192 ductal carcinoma, cell line, Pancreas .c 75 to 916 1 to 845       845/1071
(78 %)
23 diff
(97.9 %id)
BU196395 ductal carcinoma, cell line, Pancreas .c 75 to 938 1 to 875       875/1014
(86 %)
13 diff
(98.8 %id)
BU157502 ductal carcinoma, cell line, Pancreas .c 75 to 906 1 to 837       837/841
(99 %)
12 diff
(98.6 %id)
BU180122 ductal carcinoma, cell line, Pancreas .c 75 to 837 1 to 767       767/868
(88 %)
24 diff
(97.3 %id)
BU196902 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 791       791/856
(92 %)
9 diff
(99.0 %id)
BU197078 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 788       788/835
(94 %)
7 diff
(99.2 %id)
BU174644 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 789       789/906
(87 %)
13 diff
(98.6 %id)
BU180437 ductal carcinoma, cell line, Pancreas .c 75 to 850 1 to 783       783/941
(83 %)
17 diff
(98.2 %id)
BU168499 ductal carcinoma, cell line, Pancreas .c 75 to 1055 1 to 992       992/992
(100 %)
37 diff
(96.3 %id)
BU174181 ductal carcinoma, cell line, Pancreas .c 75 to 1062 1 to 1005       1005/1005
(100 %)
33 diff
(96.8 %id)
BQ884054 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 785   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 785/1008
(77 %)
2 diff
(99.9 %id)
BU151665 ductal carcinoma, cell line, Pancreas .c 75 to 994 1 to 930       930/989
(94 %)
26 diff
(97.4 %id)
BU191175 ductal carcinoma, cell line, Pancreas .c 75 to 974 1 to 917       917/917
(100 %)
35 diff
(96.2 %id)
BU157944 ductal carcinoma, cell line, Pancreas .c 75 to 851 1 to 782       782/908
(86 %)
19 diff
(98.0 %id)
BU158036 ductal carcinoma, cell line, Pancreas .c 75 to 787 1 to 716       716/951
(75 %)
21 diff
(97.8 %id)
BU174447 ductal carcinoma, cell line, Pancreas .c 75 to 957 1 to 890       888/892
(99 %)
28 diff
(96.9 %id)
BQ893019 ductal carcinoma, cell line, Pancreas .c 75 to 944 1 to 869       869/870
(99 %)
9 diff
(99.0 %id)
BQ897501 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 786   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 786/885
(88 %)
3 diff
(99.7 %id)
BQ878707 ductal carcinoma, cell line, Pancreas .c 75 to 818 1 to 747       747/873
(85 %)
7 diff
(99.2 %id)
BQ878968 ductal carcinoma, cell line, Pancreas .c 75 to 940 1 to 870       870/870
(100 %)
8 diff
(99.1 %id)
BQ689268 ductal carcinoma, cell line, Pancreas .c 75 to 937 1 to 870       870/870
(100 %)
10 diff
(98.9 %id)
BQ688064 ductal carcinoma, cell line, Pancreas .c 75 to 932 1 to 870   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 866/882
(98 %)
12 diff
(98.7 %id)
BQ890454 ductal carcinoma, cell line, Pancreas .c 75 to 941 1 to 864       864/865
(99 %)
9 diff
(99.0 %id)
BQ688355 ductal carcinoma, cell line, Pancreas .c 75 to 937 1 to 869       869/873
(99 %)
16 diff
(98.2 %id)
BQ879490 ductal carcinoma, cell line, Pancreas .c 75 to 946 1 to 880       880/916
(96 %)
17 diff
(98.2 %id)
BQ689813 ductal carcinoma, cell line, Pancreas .c 75 to 933 1 to 865       865/865
(100 %)
14 diff
(98.4 %id)
BQ688038 ductal carcinoma, cell line, Pancreas .c 75 to 923 1 to 855       855/856
(99 %)
12 diff
(98.6 %id)
BQ687172 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 792       792/870
(91 %)
10 diff
(98.9 %id)
BQ691837 ductal carcinoma, cell line, Pancreas .c 75 to 840 1 to 775       775/966
(80 %)
21 diff
(97.9 %id)
BQ691891 ductal carcinoma, cell line, Pancreas .c 75 to 942 1 to 880       880/885
(99 %)
14 diff
(98.5 %id)
BQ687092 ductal carcinoma, cell line, Pancreas .c 75 to 918 1 to 850       850/853
(99 %)
9 diff
(99.0 %id)
BQ685259 ductal carcinoma, cell line, Pancreas .c 75 to 910 1 to 848       846/859
(98 %)
14 diff
(98.4 %id)
BQ685357 ductal carcinoma, cell line, Pancreas .c 75 to 942 1 to 872       872/884
(98 %)
16 diff
(98.2 %id)
BQ691764 ductal carcinoma, cell line, Pancreas .c 75 to 840 1 to 768       768/857
(89 %)
3 diff
(99.7 %id)
BQ877317 ductal carcinoma, cell line, Pancreas .c 75 to 942 1 to 874   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 874/875
(99 %)
18 diff
(98.0 %id)
BU145236 ductal carcinoma, cell line, Pancreas .c 75 to 932 1 to 869       869/885
(98 %)
22 diff
(97.6 %id)
BU145655 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 791   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 791/891
(88 %)
13 diff
(98.6 %id)
BQ897568 ductal carcinoma, cell line, Pancreas .c 75 to 958 1 to 887       887/889
(99 %)
15 diff
(98.4 %id)
BU146063 ductal carcinoma, cell line, Pancreas .c 75 to 787 1 to 721       721/778
(92 %)
16 diff
(98.0 %id)
BQ687231 ductal carcinoma, cell line, Pancreas .c 75 to 862 1 to 790   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 790/903
(87 %)
9 diff
(99.1 %id)
BQ691777 ductal carcinoma, cell line, Pancreas .c 75 to 793 1 to 722       722/916
(78 %)
11 diff
(98.8 %id)
BQ686375 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 789   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 789/908
(86 %)
14 diff
(98.5 %id)
BQ688238 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 789       789/892
(88 %)
13 diff
(98.6 %id)
BQ878225 ductal carcinoma, cell line, Pancreas .c 75 to 887 1 to 816       816/873
(93 %)
11 diff
(98.8 %id)
BQ685122 ductal carcinoma, cell line, Pancreas .c 75 to 942 1 to 875       873/982
(88 %)
12 diff
(98.8 %id)
BQ691351 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 792   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 792/856
(92 %)
14 diff
(98.4 %id)
BQ685125 ductal carcinoma, cell line, Pancreas .c 75 to 866 1 to 794       794/864
(91 %)
10 diff
(98.9 %id)
BQ685145 ductal carcinoma, cell line, Pancreas .c 75 to 922 1 to 854       854/860
(99 %)
13 diff
(98.5 %id)
BQ687964 ductal carcinoma, cell line, Pancreas .c 75 to 917 1 to 850       850/871
(97 %)
10 diff
(98.9 %id)
BQ689409 ductal carcinoma, cell line, Pancreas .c 75 to 888 1 to 814       814/897
(90 %)
6 diff
(99.4 %id)
BQ688738 ductal carcinoma, cell line, Pancreas .c 75 to 951 1 to 886       886/887
(99 %)
18 diff
(98.0 %id)
BQ691408 ductal carcinoma, cell line, Pancreas .c 75 to 862 1 to 795   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 795/906
(87 %)
23 diff
(97.5 %id)
BQ690482 ductal carcinoma, cell line, Pancreas .c 75 to 942 1 to 878   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 860/885
(97 %)
15 diff
(98.4 %id)
BQ687957 ductal carcinoma, cell line, Pancreas .c 75 to 858 1 to 784   AAA   784/883
(88 %)
7 diff
(99.3 %id)
BQ686654 ductal carcinoma, cell line, Pancreas .c 75 to 970 1 to 900       896/953
(94 %)
8 diff
(99.2 %id)
BQ691567 ductal carcinoma, cell line, Pancreas .c 75 to 946 1 to 882       882/916
(96 %)
20 diff
(97.9 %id)
BQ684778 ductal carcinoma, cell line, Pancreas .c 75 to 970 1 to 905       905/928
(97 %)
16 diff
(98.3 %id)
BQ685861 ductal carcinoma, cell line, Pancreas .c 75 to 994 1 to 922       922/948
(97 %)
17 diff
(98.3 %id)
BQ687828 ductal carcinoma, cell line, Pancreas .c 75 to 994 1 to 927       927/944
(98 %)
18 diff
(98.1 %id)
BQ689582 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 789   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 789/933
(84 %)
8 diff
(99.2 %id)
BQ686116 ductal carcinoma, cell line, Pancreas .c 75 to 990 1 to 921       921/921
(100 %)
15 diff
(98.4 %id)
BQ687497 ductal carcinoma, cell line, Pancreas .c 75 to 859 1 to 786   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 786/891
(88 %)
7 diff
(99.3 %id)
BQ687710 ductal carcinoma, cell line, Pancreas .c 75 to 975 1 to 901       901/905
(99 %)
13 diff
(98.6 %id)
BQ685883 ductal carcinoma, cell line, Pancreas .c 75 to 863 1 to 792       792/909
(87 %)
10 diff
(98.9 %id)
BQ689697 ductal carcinoma, cell line, Pancreas .c 75 to 953 1 to 889       889/890
(99 %)
14 diff
(98.5 %id)
BQ687966 ductal carcinoma, cell line, Pancreas .c 75 to 919 1 to 852       852/947
(89 %)
13 diff
(98.7 %id)
CV809380 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 77 to 859 1 to 786   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 786/882
(89 %)
6 diff
(99.4 %id)
R35538 whole brain .c 80 to 419 1 to 346       344/432
(79 %)
8 diff
(98.2 %id)
CR618784 B cells (Ramos cell line) Cot 25-normalized .c 82 to 1668 1 to 1587 exact     1587/1587
(100 %)
0 diff
(100 %id)
AL583156 B cells from Burkitt lymphoma .c 82 to 806 1 to 725   fully sequenced, AAA   725/725
(100 %)
22 diff
(97.0 %id)
BU157297 ductal carcinoma, cell line, Pancreas .c 82 to 1115 36 to 1078       1043/1081
(96 %)
59 diff
(94.6 %id)
BU157292 ductal carcinoma, cell line, Pancreas .c 84 to 1114 9 to 1054       1046/1057
(98 %)
47 diff
(95.6 %id)
AW403246 lymph .c 100 to 536 1 to 437       437/437
(100 %)
5 diff
(98.9 %id)
BM685953 eye, Retina Foveal and Macular .c 702 to 1164 1 to 462       462/462
(100 %)
5 diff
(99.0 %id)
BM709976 eye, optic nerve .c 709 to 1129 1 to 421   fully sequenced,   421/421
(100 %)
0 diff
(100 %id)
CK429272 eye, lacrimal gland .c 739 to 1348 1 to 610       610/610
(100 %)
0 diff
(100 %id)
CK429283 eye, lacrimal gland .c 739 to 1070 1 to 332       332/332
(100 %)
13 diff
(96.1 %id)
BM796488 Ascites, stomach .c 772 to 1069 1 to 298       298/298
(100 %)
0 diff
(100 %id)
AL583155 B cells from Burkitt lymphoma .c 776 to 1664 888 to 4   fully sequenced,   885/888
(99 %)
7 diff
(99.3 %id)
TI_227713395   .c 805 to 1697 946 to 63   AAA   884/994
(88 %)
18 diff
(98.2 %id)
TI_149297066   .c 883 to 1699 886 to 84   AAA   803/922
(87 %)
18 diff
(98.1 %id)
BI518080 pooled colon, kidney, stomach .c 887 to 1635 769 to 13       757/769
(98 %)
2 diff
(99.8 %id)
TI_45235884   .c 887 to 1635 769 to 13       757/769
(98 %)
2 diff
(99.8 %id)
TI_151771122   .c 893 to 1448 107 to 666       560/1048
(53 %)
13 diff
(98.8 %id)
AL524191 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 913 to 1591 681 to 1   fully sequenced,   681/681
(100 %)
14 diff
(98.0 %id)
BX481230   .c 916 to 1513 1 to 600       600/600
(100 %)
4 diff
(99.4 %id)
BM671122 eye, optic nerve .c 1099 to 1698 618 to 19   fully sequenced, AAA   600/600
(100 %)
0 diff
(100 %id)
AW574701 lymph .c 1166 to 1697 549 to 18   AAA   532/532
(100 %)
0 diff
(100 %id)
BM663516 eye, Retina Foveal and Macular .c 1238 to 1697 477 to 18   AAA   460/460
(100 %)
0 diff
(100 %id)
R51106 whole brain .c 1380 to 1697 329 to 14   AAA   316/316
(100 %)
3 diff
(99.1 %id)
F09391 brain, total brain .c 1393 to 1697 305 to 1       305/305
(100 %)
1 diff
(99.7 %id)
BX375906 Neuroblastoma Cot 25-normalized .d -8 to 257 1 to 265   tiling clone,   265/265
(100 %)
1 diff
(99.7 %id)
CR617165 HeLa cells Cot 25-normalized .d 46 to 1373 1 to 1328 exact tiling clone,   1328/1328
(100 %)
0 diff
(100 %id)
BX354439 Neuroblastoma Cot 25-normalized .d 1074 to 1382 307 to 1   tiling clone,   307/316
(97 %)
5 diff
(98.5 %id)
BI838333 pooled pancreas and spleen .e 1 to 741 1 to 736 G5A V6* tiling clone,   736/736
(100 %)
6 diff
(99.2 %id)
TI_57162972   .e 1 to 741 34 to 769 G5A V6*     736/769
(95 %)
11 diff
(98.6 %id)
BM923750 pooled colon, kidney, stomach .f 1 to 669 1 to 677 L182P N183Q S184Q M185H L186A ... tiling clone,   677/1449
(46 %)
12 diff
(99.2 %id)
CN261287 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 1 to 635 1 to 637 A190G P191S A192S R193P Q195V ... tiling clone,   637/637
(100 %)
3 diff
(99.6 %id)
BX089877 germinal center B cell .h 1 to 701 1 to 703   tiling clone,   703/704
(99 %)
4 diff
(99.5 %id)
AA283141 germinal center B cell .h 1 to 380 1 to 380   tiling clone,   380/380
(100 %)
4 diff
(99.0 %id)
BM686539 eye, optic nerve .h 84 to 649 2 to 567       566/567
(99 %)
7 diff
(98.8 %id)
AA213924 germinal center B cell .h 106 to 395 1 to 292       292/304
(96 %)
14 diff
(95.4 %id)
AA282912 germinal center B cell .h 551 to 1017 478 to 12   tiling clone, AAA   467/468
(99 %)
1 diff
(99.8 %id)
AA213829 germinal center B cell .h 555 to 1019 469 to 5   tiling clone,   465/469
(99 %)
0 diff
(100 %id)
BI753212 brain .i 1 to 690 1 to 692   tiling clone,   692/692
(100 %)
7 diff
(99.0 %id)
TI_57217903   .i 1 to 690 87 to 778       692/778
(88 %)
12 diff
(98.5 %id)
BX422326 fetal liver, Liver .i 85 to 1044 1 to 955 G114X Q154K S155A P156Q A157P ...     955/1056
(90 %)
8 diff
(99.3 %id)
BX445067 brain, fetal brain .i 131 to 1039 1 to 903 Q154K S155A P156Q A157P E158S ...     903/903
(100 %)
18 diff
(98.1 %id)
BI522553 brain .i 147 to 1021 1 to 872 exact     872/874
(99 %)
8 diff
(99.1 %id)
TI_57183816   .i 155 to 1039 30 to 915 K73N K74E K75E V76G N78Q ... AAA   886/915
(96 %)
22 diff
(97.6 %id)
TI_57168356   .i 155 to 957 29 to 833 P138H T140P C141A L142W A144P ...     805/834
(96 %)
15 diff
(98.3 %id)
CR999732 T-Lymphocytes .i 160 to 973 1 to 814 exact tiling clone,   814/814
(100 %)
4 diff
(99.6 %id)
BI767587 pooled lung and spleen .i 161 to 1039 1 to 880 K73N K74E K75E V76G N78Q ... AAA   880/880
(100 %)
16 diff
(98.2 %id)
BI837279 pooled pancreas and spleen .i 161 to 957 1 to 799 P138H T140P C141A L142W A144P ...     799/800
(99 %)
9 diff
(98.9 %id)
CR986710 T-Lymphocytes .i 161 to 908 1 to 750 C141X L142P A144G L145P A146G ...     750/759
(98 %)
3 diff
(99.7 %id)
BI831588 brain, medulla .i 162 to 1009 1 to 859 L147P S148E L149S R150A W151L ...     859/862
(99 %)
14 diff
(98.4 %id)
BI819857 pooled brain, lung, testis .i 165 to 1014 1 to 853 exact     853/854
(99 %)
5 diff
(99.5 %id)
TI_57202951   .i 165 to 1014 48 to 900 exact     853/901
(94 %)
5 diff
(99.5 %id)
BM918535 pooled pancreas and spleen .i 166 to 1040 1 to 881 exact     881/1037
(84 %)
15 diff
(98.6 %id)
CA308080 Alveolar Macrophage, lung .i 675 to 1392 735 to 19   tiling clone, AAA   717/717
(100 %)
2 diff
(99.8 %id)
CR594740 Placenta Cot 25-normalized .j 1 to 1783 1 to 1783 exact tiling clone,   1783/1783
(100 %)
0 diff
(100 %id)
TI_57182823   .j 7 to 791 31 to 842 G2P E3K R4M K5X G6*     812/843
(96 %)
51 diff
(94.0 %id)
AL544060 placenta, Placenta Cot 25-normalized .j 8 to 884 10 to 883 N53X G114X fully sequenced,   874/883
(98 %)
7 diff
(99.3 %id)
BI771435 pooled lung and spleen .j 12 to 791 1 to 807 G2P E3K R4M K5X G6*     807/808
(99 %)
48 diff
(94.1 %id)
DB253817 uterus .j 44 to 602 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BX420381 brain, fetal brain .j 46 to 1040 1 to 983 Q154K S155A P156Q A157P E158S ...     983/983
(100 %)
30 diff
(97.0 %id)
CR594316 fetal brain .j 47 to 1758 1 to 1712 exact     1712/1712
(100 %)
0 diff
(100 %id)
CR618086 Placenta Cot 25-normalized .j 47 to 1782 1 to 1736 exact     1736/1736
(100 %)
0 diff
(100 %id)
AL551404 placenta, Placenta Cot 25-normalized .j 47 to 985 1 to 935 G114X Q154K S155A P156Q A157P ... fully sequenced,   935/935
(100 %)
9 diff
(99.1 %id)
BU539377 adenocarcinoma, cell line, breast .j 51 to 378 1 to 329       329/1252
(26 %)
7 diff
(99.5 %id)
BU558015 adenocarcinoma, cell line, breast .j 51 to 303 1 to 253       253/253
(100 %)
0 diff
(100 %id)
DB445624 testis .j 52 to 478 1 to 426       426/426
(100 %)
14 diff
(96.8 %id)
TI_44184820   .j 57 to 936 25 to 901 exact     877/903
(97 %)
13 diff
(98.6 %id)
BM560100 brain, medulla .j 58 to 688 19 to 653   AAA   635/1031
(61 %)
20 diff
(98.1 %id)
TI_57197427   .j 70 to 782 53 to 766 exact     714/766
(93 %)
6 diff
(99.3 %id)
TI_57150303   .j 70 to 629 62 to 621       560/621
(90 %)
6 diff
(99.1 %id)
BU169039 ductal carcinoma, cell line, Pancreas .j 73 to 575 2 to 505       504/985
(51 %)
11 diff
(98.9 %id)
BI763076 pooled colon, kidney, stomach .j 76 to 629 1 to 554       554/554
(100 %)
0 diff
(100 %id)
BU158059 ductal carcinoma, cell line, Pancreas .j 79 to 688 24 to 633       610/972
(62 %)
2 diff
(99.8 %id)
BU145339 ductal carcinoma, cell line, Pancreas .j 82 to 491 1 to 412       412/1156
(35 %)
3 diff
(99.8 %id)
BQ878281 ductal carcinoma, cell line, Pancreas .j 82 to 522 1 to 441       441/1445
(30 %)
3 diff
(99.8 %id)
BU145391 ductal carcinoma, cell line, Pancreas .j 82 to 672 1 to 594       594/1157
(51 %)
16 diff
(98.7 %id)
BQ888284 ductal carcinoma, cell line, Pancreas .j 82 to 690 1 to 610       610/975
(62 %)
5 diff
(99.5 %id)
BI820752 pooled brain, lung, testis .j 83 to 782 1 to 700 exact     700/700
(100 %)
0 diff
(100 %id)
CR979291 T-Lymphocytes .j 83 to 680 1 to 598       598/598
(100 %)
0 diff
(100 %id)
TI_57172337   .j 89 to 924 44 to 890 L147P S148E L149S R150A W151L ...     847/893
(94 %)
17 diff
(98.1 %id)
BM854607 stomach .j 425 to 859 1 to 435       435/435
(100 %)
0 diff
(100 %id)
CN261286 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .j 478 to 1201 1 to 722       722/722
(100 %)
2 diff
(99.8 %id)
BX445066 brain, fetal brain .j 739 to 1758 1013 to 1       1013/1013
(100 %)
34 diff
(96.7 %id)
AL570292 placenta, Placenta Cot 25-normalized .j 854 to 1783 923 to 1   fully sequenced,   923/923
(100 %)
14 diff
(98.5 %id)
AL574982 placenta, Placenta Cot 25-normalized .j 924 to 1782 854 to 1   fully sequenced,   854/854
(100 %)
6 diff
(99.3 %id)
TI_44184821   .j 997 to 1721 766 to 8       755/956
(78 %)
14 diff
(98.6 %id)
BX394050 Neuroblastoma Cot 25-normalized .k 1 to 1123 1 to 1115 A105P N106T C107A D108T Y109T ... tiling clone,   1115/1139
(97 %)
18 diff
(98.5 %id)
AL516144 brain, neuroblastoma, neuroblastoma cells .k 17 to 895 1 to 879       879/879
(100 %)
6 diff
(99.4 %id)
TI_57179734   .k 66 to 886 69 to 890       822/892
(92 %)
13 diff
(98.6 %id)
BI770464 pooled lung and spleen .k 71 to 886 1 to 818   tiling clone,   818/820
(99 %)
8 diff
(99.1 %id)
AL556665 placenta .k 411 to 1207 1 to 706   fully sequenced,   550/550
(100 %)
37 diff
(93.3 %id)
CR978671 T-Lymphocytes .k 411 to 718 38 to 346       309/348
(88 %)
8 diff
(97.8 %id)
BQ892468 ductal carcinoma, cell line, Pancreas .k 412 to 1012 8 to 608       601/990
(60 %)
14 diff
(98.6 %id)
BE379358 endometrium, adenocarcinoma cell line, uterus .k 413 to 760 52 to 398       347/398
(87 %)
6 diff
(98.5 %id)
BQ548977 insulinoma, Pancreas .k 414 to 1009 1 to 595   tiling clone,   595/595
(100 %)
3 diff
(99.5 %id)
CK826291 insulinoma, Pancreas .k 414 to 1007 1 to 593       593/593
(100 %)
8 diff
(98.7 %id)
BQ057074 lymph, lymphoma, cell line .k 456 to 980 1 to 525       525/1129
(46 %)
8 diff
(99.3 %id)
CN261284 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .k 630 to 932 1 to 303       303/303
(100 %)
0 diff
(100 %id)
CU454640 epidermis .k 672 to 847 186 to 11     Submitted on the opposite strand 176/198
(88 %)
1 diff
(99.5 %id)
BM753576 stomach .k 811 to 966 7 to 164       158/164
(96 %)
7 diff
(95.8 %id)
AL516143 brain, neuroblastoma, neuroblastoma cells .k 1175 to 2100 926 to 1   tiling clone,   928/932
(99 %)
29 diff
(96.9 %id)
AL578877 placenta .k 1177 to 2087 920 to 1   tiling clone, fully sequenced,   920/920
(100 %)
36 diff
(96.1 %id)
BP201074 amygdala .l 1 to 585 1 to 582       582/582
(100 %)
8 diff
(98.7 %id)
BP201107 amygdala .l 1 to 583 1 to 582   tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
AK293927 cerebellum .l 9 to 1003 1 to 995 exact tiling clone,   995/1049
(94 %)
4 diff
(99.7 %id)
DC309094 cerebellum .l 9 to 528 1 to 520       520/520
(100 %)
2 diff
(99.7 %id)
DA112841 cerebellum .l 10 to 433 2 to 427   capped   426/426
(100 %)
11 diff
(97.5 %id)
TI_57176811   .l 18 to 688 65 to 734       670/734
(91 %)
6 diff
(99.2 %id)
BI829552 brain, medulla .l 22 to 688 1 to 666       666/666
(100 %)
2 diff
(99.7 %id)
CD557406 testis .l 279 to 965 27 to 720       694/935
(74 %)
25 diff
(97.4 %id)
TI_154139827   .l 314 to 918 80 to 683       604/604
(100 %)
11 diff
(98.2 %id)
BQ931904 sciatic nerve .l 958 to 1691 1 to 735   tiling clone,   735/996
(73 %)
4 diff
(99.6 %id)
AW751373 colon .l 1205 to 1369 190 to 26       165/190
(86 %)
0 diff
(100 %id)
CB216197 normal endometrium, mid-secretory phase,cycle day 23, uterus .m-u 1 to 621 1 to 621   tiling clone,   621/621
(100 %)
2 diff
(99.7 %id)
BG110672 Bone, osteosarcoma, cell line .m-u 23 to 788 1 to 752   tiling clone,   752/953
(78 %)
21 diff
(97.8 %id)
BE068986 breast .m-u 116 to 270 1 to 155       155/155
(100 %)
1 diff
(99.4 %id)
R83131 breast .m-u 306 to 637 1 to 334       334/413
(80 %)
5 diff
(98.8 %id)
R82940 breast .m-u 924 to 1220 297 to 1   tiling clone,   297/297
(100 %)
9 diff
(97.0 %id)
BX431743 fetal liver, Liver .n 1 to 869 1 to 867 exact tiling clone,   867/880
(98 %)
12 diff
(98.7 %id)
C16011   .n 379 to 822 1 to 446   tiling clone,   446/446
(100 %)
16 diff
(96.5 %id)
CN270924 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .o-u 1 to 412 1 to 412 exact tiling clone,   412/412
(100 %)
2 diff
(99.6 %id)
EC569314 Prostate .p-u 1 to 117 1 to 117 exact tiling clone,   117/119
(98 %)
2 diff
(98.4 %id)
EC451576 Prostate .p-u 2 to 116 1 to 115   tiling clone,   115/116
(99 %)
2 diff
(98.3 %id)
EC538825 Prostate .p-u 2 to 116 1 to 115       115/116
(99 %)
2 diff
(98.3 %id)
BI008266 kidney_tumor .q-u 1 to 102 1 to 102 G2R H3I M6V tiling clone,   102/104
(98 %)
6 diff
(94.3 %id)
BE174879 head_neck Gene CCDC130, variant not shown              
BC047520 Kidney Gene CCDC130, variant not shown       available from MGC, AAA This clone was ignored    
DA945187 Spleen Gene CCDC130, variant not shown       capped      
DB333469 Spleen Gene CCDC130, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n, .o-u, .p-u, .q-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI