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Gene MFAP3LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
169 supporting clones for gene MFAP3L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DR003540 hippocampus .a 1 to 555 9 to 563   tiling clone,   555/563
(98 %)
7 diff
(98.8 %id)
AK290041 hippocampus .a 69 to 1856 1 to 1788 exact     1788/1788
(100 %)
0 diff
(100 %id)
DA336458 hippocampus .a 70 to 664 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
AB014526 brain .a 131 to 6314 1 to 6184 exact tiling clone, available from KIAA,   6184/6184
(100 %)
0 diff
(100 %id)
NM_021647.6   .a 131 to 6317 1 to 6187 exact RefSeq, AAA   6187/6187
(100 %)
0 diff
(100 %id)
BG108921 retina, Retinal Pigment Epithelium sheets .a 190 to 518 1 to 329       329/330
(99 %)
8 diff
(97.6 %id)
AY391838 testis .a 198 to 1542 1 to 1345 D362N     1345/1345
(100 %)
1 diff
(100.0 %id)
CV025132 mixed .a 309 to 467 1 to 159       159/159
(100 %)
5 diff
(96.9 %id)
BI832198 brain, medulla .a 605 to 1204 79 to 679       601/680
(88 %)
4 diff
(99.5 %id)
TI_57175253   .a 605 to 1204 79 to 679       601/680
(88 %)
4 diff
(99.5 %id)
BF948870 nervous_normal .a 743 to 1069 14 to 339       326/339
(96 %)
6 diff
(98.3 %id)
AL703848 human skeletal muscle .a 745 to 1345 1 to 601       601/601
(100 %)
2 diff
(99.7 %id)
DA320747 hippocampus .a 853 to 1401 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
ES312647 beard hair, skin .a 1031 to 1163 1 to 133       133/133
(100 %)
0 diff
(100 %id)
AA770268   .a 1060 to 1572 510 to 2       509/512
(99 %)
0 diff
(100 %id)
BX485548   .a 1308 to 1980 42 to 714       673/714
(94 %)
7 diff
(99.1 %id)
DA320103 hippocampus .a 1371 to 1929 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
AA426379.
matches multiple genes
  .a 1474 to 1933 462 to 3     also hits gene seydeebu 460/462
(99 %)
0 diff
(100 %id)
BX106796   .a 1516 to 1752 1 to 240       240/240
(100 %)
4 diff
(98.4 %id)
AA293849   .a 1516 to 1904 1 to 389       389/389
(100 %)
0 diff
(100 %id)
BP201607 amygdala .a 1618 to 2198 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
AI784092 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1714 to 2038 325 to 1       325/325
(100 %)
0 diff
(100 %id)
AW572927 pooled .a 1970 to 2454 486 to 2       485/486
(99 %)
0 diff
(100 %id)
DA107327 cerebellum .a 1979 to 2508 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
AI208994   .a 2033 to 2455 433 to 12   AAA   422/422
(100 %)
9 diff
(97.9 %id)
AA398341   .a 2073 to 2452 380 to 1       380/380
(100 %)
0 diff
(100 %id)
AI001804   .a 2092 to 2456 368 to 4       365/368
(99 %)
0 diff
(100 %id)
AW510734 pooled .a 2107 to 2454 349 to 2       348/349
(99 %)
0 diff
(100 %id)
DA245754 brain .a 2116 to 2714 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
AI214333   .a 2174 to 2458 293 to 9       285/293
(97 %)
0 diff
(100 %id)
DB067332 testis .a 2181 to 2716 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
CU456632 epidermis .a 2231 to 2623 11 to 403       393/405
(97 %)
4 diff
(99.1 %id)
AL044769 testis .a 2312 to 2802 1 to 491       491/491
(100 %)
3 diff
(99.4 %id)
BG954062 colon .a 2380 to 2639 1 to 260       260/269
(96 %)
6 diff
(97.8 %id)
DA340266 hippocampus .a 2407 to 2981 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DA335436 hippocampus .a 2457 to 3045 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA248215 brain .a 2481 to 3079 2 to 600   capped   599/599
(100 %)
2 diff
(99.7 %id)
DA412024 thalamus .a 2508 to 3053 2 to 548   capped   547/558
(98 %)
3 diff
(99.5 %id)
DA211610 brain .a 2744 to 3292 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA108059 cerebellum .a 2905 to 3466 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA117741 cerebellum .a 2982 to 3553 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB089997 testis .a 2985 to 3549 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA355538 subthalamic nucleus .a 3048 to 3613 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BU186177 eye, retinoblastoma .a 3111 to 3970 1 to 869       869/896
(96 %)
17 diff
(98.2 %id)
AV721436 hypothalamus .a 3230 to 3845 1 to 619       619/810
(76 %)
26 diff
(96.8 %id)
DA410030 thalamus .a 3232 to 3748 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
BG619417 placenta .a 3334 to 4059 1 to 734       734/895
(82 %)
19 diff
(97.9 %id)
BX956011   .a 3370 to 4051 1 to 682       682/682
(100 %)
1 diff
(99.9 %id)
DA168444 amygdala .a 3833 to 4419 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
AL134746 brain .a 3844 to 4381 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DA159145 amygdala .a 3892 to 4465 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
CU453793 epidermis .a 4002 to 4767 1 to 766       766/766
(100 %)
8 diff
(99.0 %id)
DA300682 hippocampus .a 4051 to 4625 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA293479 hippocampus .a 4061 to 4636 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
H01160 placenta .a 4216 to 4640 1 to 440       440/440
(100 %)
20 diff
(95.5 %id)
DA356791 subthalamic nucleus .a 4239 to 4799 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
DA176187 amygdala .a 4244 to 4819 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BE047958 brain, tumor, 5 pooled (see description) .a 4255 to 4808 10 to 563       554/563
(98 %)
6 diff
(99.0 %id)
DA174676 amygdala .a 4273 to 4804 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
AL079736 testis .a 4417 to 5022 1 to 606       606/606
(100 %)
0 diff
(100 %id)
BG429867 Kidney .a 4418 to 4978 1 to 562       562/873
(64 %)
6 diff
(99.4 %id)
CU444899 epidermis .a 4522 to 5333 823 to 12     Submitted on the opposite strand 812/823
(98 %)
0 diff
(100 %id)
CU453642 epidermis .a 4522 to 5341 822 to 3     Submitted on the opposite strand 820/822
(99 %)
0 diff
(100 %id)
CU447637 epidermis .a 4530 to 5341 814 to 3     Submitted on the opposite strand 812/814
(99 %)
0 diff
(100 %id)
CD104070 Pooled-Skin .a 4537 to 5316 1 to 782       782/791
(98 %)
7 diff
(99.2 %id)
BU569928 testis .a 4549 to 5344 1 to 794       794/794
(100 %)
6 diff
(99.3 %id)
CU455699 epidermis .a 4552 to 5341 792 to 3     Submitted on the opposite strand 790/792
(99 %)
0 diff
(100 %id)
CU444873 epidermis .a 4553 to 5341 791 to 3     Submitted on the opposite strand 789/791
(99 %)
0 diff
(100 %id)
CU446385 epidermis .a 4572 to 5341 772 to 3     Submitted on the opposite strand 770/772
(99 %)
0 diff
(100 %id)
CU444034 epidermis .a 4581 to 5341 763 to 3     Submitted on the opposite strand 761/763
(99 %)
0 diff
(100 %id)
H04203 placenta .a 4725 to 5124 1 to 414       414/430
(96 %)
14 diff
(96.8 %id)
DA368398 subthalamic nucleus .a 4786 to 5345 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BG286748 bladder, transitional cell papilloma, cell line .a 5038 to 5725 1 to 686       686/686
(100 %)
5 diff
(99.3 %id)
CF456082 peripheral nervous system .a 5239 to 6024 26 to 805       780/806
(96 %)
7 diff
(99.2 %id)
DA094641 cerebellum .a 5345 to 5924 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
BE073870 breast .a 5346 to 5788 66 to 508       443/517
(85 %)
7 diff
(98.7 %id)
BE073871 breast .a 5346 to 5783 85 to 522       438/522
(83 %)
6 diff
(98.9 %id)
H25874 breast .a 5441 to 5822 1 to 390       390/396
(98 %)
10 diff
(97.5 %id)
R50221 breast .a 5443 to 5804 1 to 371       371/387
(95 %)
12 diff
(96.9 %id)
H01381 placenta .a 5516 to 5845 1 to 332       332/419
(79 %)
6 diff
(98.6 %id)
AI190873   .a 5530 to 5793 266 to 3       264/266
(99 %)
0 diff
(100 %id)
AI648390 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 5603 to 5798 196 to 1       196/196
(100 %)
0 diff
(100 %id)
CB146847 Liver .a 5609 to 6190 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
H87815 eye, retina .a 5682 to 6067 1 to 391   fully sequenced,   391/391
(100 %)
10 diff
(97.5 %id)
BF439144 pooled .a 5717 to 6310 595 to 2       594/595
(99 %)
0 diff
(100 %id)
N78462 multiple sclerosis lesions .a 5722 to 5917 1 to 196       196/200
(98 %)
2 diff
(99.0 %id)
AW300352 Kidney .a 5764 to 6307 544 to 1       544/544
(100 %)
0 diff
(100 %id)
AI634872 Kidney .a 5766 to 6314 549 to 1       549/549
(100 %)
0 diff
(100 %id)
AW072429 pooled .a 5779 to 6310 540 to 9       532/540
(98 %)
0 diff
(100 %id)
DB551562 hippocampus .a 5819 to 6310 1 to 493     Submitted on the opposite strand 493/493
(100 %)
2 diff
(99.6 %id)
BE464267 Kidney .a 5822 to 6311 493 to 4       490/493
(99 %)
0 diff
(100 %id)
AI741894 pooled .a 5825 to 6313 492 to 4       489/492
(99 %)
0 diff
(100 %id)
AI690251 carcinoid, lung .a 5826 to 6318 493 to 1       493/493
(100 %)
2 diff
(99.6 %id)
BF434755 Kidney .a 5836 to 6319 488 to 5       484/488
(99 %)
0 diff
(100 %id)
BE468177 carcinoid, lung .a 5863 to 6318 456 to 1       456/456
(100 %)
0 diff
(100 %id)
AI672329 Kidney .a 5864 to 6312 466 to 18   AAA   449/449
(100 %)
4 diff
(99.2 %id)
AI373050 Kidney .a 5867 to 6319 454 to 2   tiling clone,   453/454
(99 %)
0 diff
(100 %id)
AI564122 Kidney .a 5868 to 6319 453 to 2       452/453
(99 %)
0 diff
(100 %id)
DB546276 hippocampus .a 5884 to 6310 1 to 428     Submitted on the opposite strand 428/428
(100 %)
1 diff
(99.8 %id)
BU752876 placenta .a 5884 to 6310 444 to 18   AAA   427/427
(100 %)
4 diff
(99.1 %id)
BQ023915 placenta .a 5905 to 6313 427 to 19   AAA   409/409
(100 %)
0 diff
(100 %id)
AW015769   .a 5908 to 6317 428 to 18   AAA   411/411
(100 %)
4 diff
(99.1 %id)
AI478496 Kidney .a 5926 to 6312 411 to 25   AAA   387/387
(100 %)
5 diff
(98.8 %id)
AW591260 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 5942 to 6310 369 to 1       369/369
(100 %)
1 diff
(99.8 %id)
AI478244 Kidney .a 5963 to 6310 349 to 2       348/349
(99 %)
0 diff
(100 %id)
AI433470 Kidney .a 5970 to 6314 369 to 7       363/369
(98 %)
0 diff
(100 %id)
H01161 placenta .a 5995 to 6290 306 to 1       306/314
(97 %)
12 diff
(96.2 %id)
H87765 eye, retina .a 6037 to 6300 269 to 1   fully sequenced,   269/269
(100 %)
11 diff
(96.0 %id)
BM552945 brain, medulla .b 1 to 1061 21 to 1098 I212N A213C I214H K215P V216G ... tiling clone,   1078/1140
(94 %)
50 diff
(95.7 %id)
NM_001009554.2   .b 1 to 5825 1 to 5825 exact RefSeq, AAA   5825/5825
(100 %)
0 diff
(100 %id)
AK308263 testis .b 3 to 1534 1 to 1532 E289*     1532/1532
(100 %)
1 diff
(100.0 %id)
BP369391 testis .b 3 to 581 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DB034124 testis .b 4 to 577 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB443636.
matches multiple genes
testis .b 6 to 455 1 to 449     also hits gene bugy 449/449
(100 %)
8 diff
(98.3 %id)
BG717786 testis .b 14 to 592 1 to 579       579/579
(100 %)
5 diff
(99.2 %id)
BI461126 testis .b 16 to 713 6 to 704       699/704
(99 %)
10 diff
(98.6 %id)
AF327560 testis .b 18 to 1962 12 to 1956 exact tiling clone,   1945/1961
(99 %)
8 diff
(99.6 %id)
DB443232.
matches multiple genes
testis .b 18 to 496 1 to 481     also hits gene bugy 481/481
(100 %)
16 diff
(96.7 %id)
BI464030 testis .b 19 to 821 1 to 808       808/1049
(77 %)
21 diff
(98.0 %id)
DB037038 testis .b 19 to 599 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
AA424228   .b 22 to 494 1 to 473       473/473
(100 %)
0 diff
(100 %id)
BC066912 testis .b 24 to 1958 1 to 1935 exact tiling clone, available from MGC, AAA   1935/1935
(100 %)
4 diff
(99.8 %id)
TI_57176419   .b 29 to 714 29 to 719       691/719
(96 %)
14 diff
(98.1 %id)
BP369421 testis .b 29 to 599 1 to 569       569/579
(98 %)
3 diff
(99.5 %id)
DB035549 testis .b 30 to 574 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB036052 testis .b 30 to 617 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DB053907 testis .b 30 to 543 2 to 516   capped   515/516
(99 %)
2 diff
(99.7 %id)
BI829852 brain, medulla .b 31 to 714 1 to 689       689/689
(100 %)
8 diff
(98.9 %id)
TI_57173632   .b 36 to 714 69 to 747       679/747
(90 %)
7 diff
(99.1 %id)
DB041563 testis .b 40 to 594 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB057427 testis .b 40 to 559 2 to 523   capped   522/522
(100 %)
4 diff
(99.3 %id)
DB059354 testis .b 40 to 575 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BI826153 brain, medulla .b 41 to 714 1 to 674       674/674
(100 %)
1 diff
(99.9 %id)
BP369154 testis .b 44 to 622 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
BM559711 brain, medulla .b 45 to 1042 21 to 1035       1015/1089
(93 %)
49 diff
(95.6 %id)
DB037617 testis .b 45 to 629 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DB455363.
matches multiple genes
testis .b 46 to 522 1 to 477     also hits gene bugy 477/477
(100 %)
0 diff
(100 %id)
BX092863 liver and spleen .c 1 to 725 1 to 725   tiling clone,   725/725
(100 %)
2 diff
(99.8 %id)
T95392 liver and spleen .c 1 to 375 1 to 376       376/376
(100 %)
7 diff
(98.2 %id)
R02208 liver and spleen .c 1 to 334 1 to 332       332/332
(100 %)
6 diff
(98.2 %id)
DB520487 testis .c 932 to 1391 1 to 460   tiling clone, Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
T95311 liver and spleen .c 955 to 1393 455 to 10   tiling clone,   446/456
(97 %)
0 diff
(100 %id)
R02095 liver and spleen .c 1076 to 1389 315 to 1       315/315
(100 %)
6 diff
(98.1 %id)
AI744744 ovary, tumor, 5 pooled (see description) .c 1183 to 1391 209 to 1       209/209
(100 %)
0 diff
(100 %id)
BC001279 Cervix, carcinoma .d 1 to 1298 1 to 1298 exact tiling clone, available from MGC, AAA   1298/1298
(100 %)
0 diff
(100 %id)
BE895313 melanotic melanoma, skin .d 9 to 777 1 to 778       778/852
(91 %)
47 diff
(94.5 %id)
BE547112 cervical carcinoma cell line, cervix .d 23 to 772 1 to 757   available from MGC,   757/757
(100 %)
21 diff
(97.3 %id)
AI563909 anaplastic oligodendroglioma, brain .d 493 to 965 1 to 473 exact   Submitted on the opposite strand 473/473
(100 %)
1 diff
(99.8 %id)
BI459190 testis .e 1 to 812 1 to 820 M62H V63G L64P N65Q I66Y ... tiling clone,   820/821
(99 %)
21 diff
(97.5 %id)
DB026038 testis .e 46 to 595 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB023505 testis .e 57 to 600 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB023511 testis .e 57 to 601 2 to 546   tiling clone, capped   545/545
(100 %)
0 diff
(100 %id)
DB455079 testis .f 1 to 496 2 to 497 exact tiling clone,   497/497
(100 %)
1 diff
(99.8 %id)
DB477675 hippocampus .f 1 to 483 1 to 483 E9Q     483/483
(100 %)
4 diff
(99.2 %id)
DB482711 hippocampus .f 1 to 499 1 to 499 E9Q     499/499
(100 %)
4 diff
(99.2 %id)
AA936265 pooled .f 39 to 251 1 to 213     Submitted on the opposite strand 213/213
(100 %)
9 diff
(95.8 %id)
TI_154066736   .f 39 to 510 59 to 532     Submitted on the opposite strand 474/581
(81 %)
45 diff
(92.3 %id)
BF057779 pooled germ cell tumors .f 57 to 662 1 to 607     Submitted on the opposite strand 607/614
(98 %)
9 diff
(98.6 %id)
AW003206 pooled germ cell tumors .f 79 to 676 1 to 599   tiling clone, Submitted on the opposite strand 599/599
(100 %)
7 diff
(98.9 %id)
BG718733 testis .g 1 to 565 1 to 565 L22X tiling clone, available from MGC, AAA   565/565
(100 %)
5 diff
(99.2 %id)
BC031941 testis .g 6 to 565 1 to 560   available from MGC, AAA   560/560
(100 %)
1 diff
(99.9 %id)
BX112039 pooled .g 33 to 559 1 to 527   AAA   527/527
(100 %)
0 diff
(100 %id)
BQ438469 testis .g 40 to 557 1 to 518       518/520
(99 %)
2 diff
(99.7 %id)
AA897457 pooled .g 205 to 562 358 to 1       358/358
(100 %)
0 diff
(100 %id)
AA709191   .g 332 to 563 231 to 3       229/231
(99 %)
0 diff
(100 %id)
DA412844 thalamus .h 1 to 563 2 to 565 C22V V23C A24G S25F N26* tiling clone, capped   564/564
(100 %)
2 diff
(99.7 %id)
AA988443 carcinoid, lung .h 15 to 122 1 to 108     Submitted on the opposite strand 108/108
(100 %)
2 diff
(98.2 %id)
DA228319 brain .i 1 to 550 2 to 551 exact tiling clone, capped   550/550
(100 %)
1 diff
(99.9 %id)
AI809945 pooled .j 1 to 548 553 to 6 exact tiling clone,   548/553
(99 %)
0 diff
(100 %id)
DA324165 hippocampus .k 1 to 480 2 to 482 R6X R7A P8A P9T E10* tiling clone, capped   481/481
(100 %)
1 diff
(99.8 %id)
BI024565 marrow .l-u 1 to 388 1 to 388 exact tiling clone,   388/388
(100 %)
1 diff
(99.8 %id)
BI027723 marrow .l-u 11 to 388 1 to 378 exact     378/378
(100 %)
0 diff
(100 %id)
DB058539 testis .m 1 to 219 2 to 220 exact tiling clone, capped   219/219
(100 %)
0 diff
(100 %id)
BP370271 testis Gene MFAP3L, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C