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Gene MEP1ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
170 supporting clones for gene MEP1A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
TI_2194628749   .a 1 to 1158 41 to 1184   tiling clone,   1149/1293
(88 %)
21 diff
(98.4 %id)
TI_2194629471   .a 1 to 1026 40 to 1057       1023/1189
(86 %)
18 diff
(98.5 %id)
BC143651 Cerebellum, Uterus, Testis, PCR rescuedclones .a 7 to 2369 1 to 2363 exact tiling clone,   2363/2363
(100 %)
0 diff
(100 %id)
NM_005588.2   .b 1 to 2928 2 to 2929 exact RefSeq, AAA   2929/2929
(100 %)
0 diff
(100 %id)
DA432559 colon .b 1 to 570 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
AK225212 colon .b 10 to 2343 1 to 2334 T606S M634V     2334/2334
(100 %)
3 diff
(99.9 %id)
BP220730 colon .b 10 to 575 1 to 566       566/567
(99 %)
5 diff
(99.2 %id)
DR006409 small intestine .b 22 to 681 1 to 660       660/660
(100 %)
6 diff
(99.1 %id)
BX505878   .b 27 to 750 1 to 726       726/726
(100 %)
5 diff
(99.4 %id)
AU100455   .b 27 to 278 49 to 300       252/300
(84 %)
11 diff
(96.4 %id)
AK315246 colon .b 28 to 2282 1 to 2255 V469L R518Q T726M     2255/2255
(100 %)
8 diff
(99.7 %id)
DA431671 colon .b 28 to 598 2 to 571   capped   570/583
(97 %)
2 diff
(99.7 %id)
BC131714 PCR rescued clones .b 29 to 2481 1 to 2465 V469L R476G     2465/2465
(100 %)
15 diff
(99.4 %id)
DA428243 colon .b 29 to 598 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BP383174 ilea mucosa .b 29 to 599 1 to 572       572/784
(72 %)
10 diff
(98.8 %id)
BP271172 small intestine .b 29 to 616 1 to 588       588/588
(100 %)
3 diff
(99.5 %id)
AK315840 small intestine .b 30 to 2483 1 to 2454 G306E L426P R546S A638V     2454/2454
(100 %)
4 diff
(99.9 %id)
DA431038 colon .b 31 to 494 2 to 466   capped   465/465
(100 %)
1 diff
(99.8 %id)
BP383037 ilea mucosa .b 31 to 706 1 to 676       676/676
(100 %)
2 diff
(99.8 %id)
BP270423 small intestine .b 31 to 613 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP270771 small intestine .b 31 to 613 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA919032 small intestine .b 31 to 595 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
AF478685 small intestine .b 32 to 2928 1 to 2897 G162V tiling clone, AAA   2897/2897
(100 %)
1 diff
(100.0 %id)
AK290282 colon .b 32 to 2561 1 to 2530 exact     2530/2530
(100 %)
0 diff
(100 %id)
DA428760 colon .b 32 to 550 2 to 521   capped   520/520
(100 %)
2 diff
(99.7 %id)
AU076747   .b 32 to 86 1 to 55       55/60
(91 %)
1 diff
(98.4 %id)
BP270017 small intestine .b 32 to 614 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP270441 small intestine .b 32 to 615 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BP270572 small intestine .b 32 to 617 1 to 586       586/586
(100 %)
7 diff
(98.9 %id)
BP270635 small intestine .b 32 to 613 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP271235 small intestine .b 32 to 595 1 to 561       561/584
(96 %)
10 diff
(98.3 %id)
BP271257 small intestine .b 32 to 614 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP271345 small intestine .b 32 to 614 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP330271 rectum .b 32 to 421 1 to 389       389/582
(66 %)
10 diff
(98.3 %id)
DA425768 colon .b 33 to 604 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA426420 colon .b 33 to 598 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA426579 colon .b 33 to 588 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA428113 colon .b 33 to 598 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA429482 colon .b 33 to 598 2 to 567   capped   566/575
(98 %)
7 diff
(98.8 %id)
DA429932 colon .b 33 to 599 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA431497 colon .b 33 to 598 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA431781 colon .b 33 to 572 2 to 542   capped   541/541
(100 %)
3 diff
(99.5 %id)
BP382836 ilea mucosa .b 33 to 394 1 to 362       362/364
(99 %)
3 diff
(99.2 %id)
BP382863 ilea mucosa .b 33 to 558 1 to 528       528/528
(100 %)
7 diff
(98.7 %id)
BP382906 ilea mucosa .b 33 to 818 1 to 788       788/945
(83 %)
11 diff
(98.9 %id)
BP382978 ilea mucosa .b 33 to 852 1 to 817       817/817
(100 %)
13 diff
(98.5 %id)
BP383098 ilea mucosa .b 33 to 516 1 to 485       485/485
(100 %)
5 diff
(99.0 %id)
BP383143 ilea mucosa .b 33 to 603 1 to 569       569/587
(96 %)
59 diff
(90.0 %id)
BP383146 ilea mucosa .b 33 to 595 1 to 569       569/569
(100 %)
4 diff
(99.3 %id)
BP383356 ilea mucosa .b 33 to 494 1 to 462       462/464
(99 %)
2 diff
(99.6 %id)
M82962 jejunum .b 33 to 2923 1 to 2902 Y26H T606S A711S V712A Q713E AAA   2902/2902
(100 %)
17 diff
(99.5 %id)
DA891108 rectum .b 33 to 603 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA919050 small intestine .b 33 to 595 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA920396 small intestine .b 33 to 590 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA924858 small intestine .b 33 to 610 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DB241810 stomach, tumor tissue .b 33 to 594 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BP270367 small intestine .b 34 to 616 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA928189 small intestine .b 34 to 589 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BP271404 small intestine .b 38 to 625 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
DA429045 colon .b 83 to 656 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA431062 colon .b 85 to 596 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
BP382821 ilea mucosa .b 86 to 596 1 to 512       512/516
(99 %)
5 diff
(99.1 %id)
TI_2194631551   .b 124 to 1186 1 to 1064       1064/1076
(98 %)
31 diff
(97.2 %id)
DB242032 stomach, tumor tissue .b 184 to 746 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BP383089 ilea mucosa .b 229 to 896 1 to 670       670/767
(87 %)
14 diff
(98.2 %id)
TI_2194629798   .b 303 to 1342 2 to 1027       1026/1164
(88 %)
22 diff
(98.2 %id)
TI_2194631172   .b 415 to 1526 1110 to 7       1104/1281
(86 %)
22 diff
(98.3 %id)
DA424922 colon .b 463 to 1030 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
TI_2194629646   .b 514 to 1616 1 to 1096       1096/1240
(88 %)
23 diff
(98.2 %id)
TI_2194629888   .b 524 to 1725 6 to 1194       1191/1227
(97 %)
32 diff
(97.4 %id)
BG982311 colon_normal .b 557 to 720 12 to 172       161/183
(87 %)
15 diff
(91.9 %id)
BP221118 colon .b 627 to 1192 1 to 566       566/566
(100 %)
6 diff
(99.0 %id)
T28210 colon, embryo .b 738 to 1078 1 to 345       345/345
(100 %)
4 diff
(98.9 %id)
AW950412   .b 739 to 1387 1 to 651       651/658
(98 %)
14 diff
(97.9 %id)
BP223487 colon mucosa .b 752 to 1463 1 to 718       718/718
(100 %)
12 diff
(98.4 %id)
TI_2194631548   .b 774 to 1823 12 to 1063       1052/1111
(94 %)
14 diff
(98.8 %id)
TI_2194631175   .b 807 to 1924 1121 to 11       1111/1253
(88 %)
18 diff
(98.6 %id)
BP221303 colon .b 815 to 1374 1 to 560       560/560
(100 %)
5 diff
(99.2 %id)
BP331142 rectum .b 823 to 1403 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA428893 colon .b 914 to 1436 2 to 525   capped   524/524
(100 %)
2 diff
(99.7 %id)
TI_2194629889   .b 969 to 2078 11 to 1115       1105/1244
(88 %)
20 diff
(98.4 %id)
TI_2194629887   .b 970 to 2170 9 to 1198       1190/1272
(93 %)
21 diff
(98.4 %id)
TI_2194629642   .b 971 to 1918 9 to 955       947/1201
(78 %)
11 diff
(99.1 %id)
CD620872   .b 1118 to 1676 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
BM798497 Ascites, stomach .b 1140 to 1321 1 to 182       182/182
(100 %)
2 diff
(99.0 %id)
BP270336 small intestine .b 1162 to 1743 1 to 582       582/582
(100 %)
0 diff
(100 %id)
TI_2194629473   .b 1183 to 2312 1189 to 71       1119/1260
(88 %)
29 diff
(97.7 %id)
AV697032 hepatocellular carcinoma .b 1197 to 1545 1 to 342       342/360
(95 %)
4 diff
(98.9 %id)
TI_2194629124   .b 1204 to 2312 1163 to 69       1095/1281
(85 %)
52 diff
(96.0 %id)
TI_2194629470   .b 1208 to 2315 1142 to 42     Submitted on the opposite strand 1101/1250
(88 %)
10 diff
(99.2 %id)
TI_2194628747   .b 1211 to 2315 1129 to 43     Submitted on the opposite strand 1087/1278
(85 %)
13 diff
(99.0 %id)
TI_2194629128   .b 1240 to 2312 1136 to 69       1068/1273
(83 %)
7 diff
(99.5 %id)
BM768857 stomach .b 1242 to 1863 1 to 621       621/621
(100 %)
5 diff
(99.2 %id)
TI_2194629475   .b 1251 to 2312 1104 to 59       1046/1235
(84 %)
20 diff
(98.4 %id)
BQ320128 colon .b 1263 to 1506 1 to 243       243/243
(100 %)
5 diff
(98.0 %id)
BQ320550 colon .b 1263 to 1506 1 to 243       243/243
(100 %)
5 diff
(98.0 %id)
TI_824943026   .b 1291 to 2178 7 to 889   fully sequenced,   883/889
(99 %)
12 diff
(98.7 %id)
BG979024 colon_normal .b 1304 to 1670 371 to 3       369/371
(99 %)
7 diff
(98.2 %id)
DN930353 pooled .b 1308 to 2026 1 to 719       719/719
(100 %)
1 diff
(99.9 %id)
TI_2194629789   .b 1318 to 2305 1 to 1002       1002/1295
(77 %)
39 diff
(97.0 %id)
TI_2194629896   .b 1328 to 2312 15 to 996       982/1226
(80 %)
8 diff
(99.4 %id)
TI_2194629643   .b 1328 to 2291 15 to 976       962/1175
(81 %)
18 diff
(98.5 %id)
TI_2194629795   .b 1330 to 2310 8 to 988       981/1215
(80 %)
10 diff
(99.2 %id)
TI_824942985   .b 1403 to 2232 9 to 839   fully sequenced,   831/839
(99 %)
15 diff
(98.3 %id)
DN831991 pooled .b 1436 to 2139 1 to 704       704/704
(100 %)
6 diff
(99.2 %id)
CK903952 Islets of Langerhans, Pancreas .b 1436 to 2021 1 to 586       586/586
(100 %)
18 diff
(97.0 %id)
BM053025 Islets of Langerhans, Pancreas .b 1452 to 2022 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
CD620873   .b 1484 to 2158 679 to 4       676/679
(99 %)
3 diff
(99.6 %id)
DN831990 pooled .b 1492 to 2191 700 to 1     Submitted on the opposite strand 700/700
(100 %)
4 diff
(99.5 %id)
BP382854 ilea mucosa .b 1494 to 2197 1 to 710       710/1010
(70 %)
20 diff
(98.1 %id)
CD620874   .b 1543 to 2163 623 to 2       622/623
(99 %)
5 diff
(99.2 %id)
DN930354 pooled .b 1549 to 2173 625 to 1     Submitted on the opposite strand 625/625
(100 %)
3 diff
(99.6 %id)
TI_2194629640   .b 1622 to 2315 1 to 694       694/1238
(56 %)
10 diff
(99.2 %id)
TI_2194629893   .b 1627 to 2312 1 to 686       686/1230
(55 %)
3 diff
(99.8 %id)
TI_2194629644   .b 1628 to 2312 8 to 692       685/1220
(56 %)
7 diff
(99.5 %id)
TI_824942986   .b 1632 to 2171 577 to 32       546/759
(71 %)
20 diff
(97.4 %id)
CD620875   .b 1693 to 2163 1 to 473       473/475
(99 %)
17 diff
(96.5 %id)
DN930566 pooled .b 1747 to 2131 421 to 25     Submitted on the opposite strand 407/421
(96 %)
57 diff
(86.5 %id)
AW842473 colon_normal .b 1755 to 1986 1 to 232       232/232
(100 %)
9 diff
(96.2 %id)
TI_824942984   .b 1794 to 2204 417 to 8   fully sequenced,   410/417
(98 %)
1 diff
(99.8 %id)
TI_824943027   .b 1794 to 2181 393 to 9   fully sequenced,   385/393
(97 %)
2 diff
(99.5 %id)
BX480476   .b 1848 to 2401 1 to 566       566/566
(100 %)
10 diff
(98.3 %id)
AA452530   .b 1851 to 2329 1 to 475       475/475
(100 %)
5 diff
(99.0 %id)
BX115819   .b 1852 to 2415 1 to 577       577/577
(100 %)
9 diff
(98.5 %id)
AI699521 pooled germ cell tumors .b 2109 to 2687 581 to 1       581/581
(100 %)
13 diff
(97.8 %id)
CK903951 Islets of Langerhans, Pancreas .b 2123 to 2689 581 to 3       579/589
(98 %)
0 diff
(100 %id)
AA639848 colon, colon tumor RER+ .b 2126 to 2678 564 to 1       564/566
(99 %)
8 diff
(98.6 %id)
BM052748 Islets of Langerhans, Pancreas .b 2154 to 2689 550 to 3       548/550
(99 %)
0 diff
(100 %id)
D25915   .b 2228 to 2583 1 to 361     Submitted on the opposite strand 361/363
(99 %)
7 diff
(98.1 %id)
CA307685 Alveolar Macrophage, lung .b 2255 to 2928 692 to 19   AAA   674/674
(100 %)
2 diff
(99.8 %id)
AA327804   .b 2369 to 2729 1 to 361       361/361
(100 %)
0 diff
(100 %id)
AW960450   .b 2370 to 2920 1 to 549       549/641
(85 %)
2 diff
(99.7 %id)
BF063001 colon, colon tumor, RER+ .b 2461 to 2924 465 to 2       464/465
(99 %)
0 diff
(100 %id)
AA454113   .b 2494 to 2924 436 to 7       430/436
(98 %)
0 diff
(100 %id)
AA622204 colon, colon tumor RER+ .b 2497 to 2923 428 to 2       427/428
(99 %)
0 diff
(100 %id)
AI738922 colon, colon tumor, RER+ .b 2497 to 2921 432 to 8       425/432
(98 %)
0 diff
(100 %id)
AI700401 colon .b 2517 to 2929 415 to 3       413/415
(99 %)
0 diff
(100 %id)
TI_2194629126   .c 1 to 1099 54 to 1144   tiling clone, Submitted on the opposite strand 1096/1288
(85 %)
25 diff
(98.1 %id)
TI_2194629474   .c 1 to 947 44 to 989     Submitted on the opposite strand 951/1221
(77 %)
9 diff
(99.3 %id)
TI_2194631174   .c 6 to 1182 1168 to 8       1161/1270
(91 %)
32 diff
(97.5 %id)
BC143650 Cerebellum, Uterus, Testis, PCR rescuedclones .c 7 to 2447 1 to 2441 exact tiling clone,   2441/2441
(100 %)
0 diff
(100 %id)
TI_2194628745   .d 1 to 1096 42 to 1127 exact tiling clone,   1091/1280
(85 %)
19 diff
(98.6 %id)
TI_2194629469   .d 1 to 1088 39 to 1122 exact     1089/1219
(89 %)
18 diff
(98.6 %id)
BC143649 Cerebellum, Uterus, Testis, PCR rescuedclones .d 7 to 2307 1 to 2301 exact tiling clone,   2301/2301
(100 %)
1 diff
(100.0 %id)
TI_2194629790   .d 283 to 1350 1 to 1056       1056/1196
(88 %)
16 diff
(98.7 %id)
TI_2194629639   .d 485 to 1679 1 to 1178       1121/1219
(91 %)
33 diff
(97.3 %id)
DC417416 trachea .e 1 to 594 1 to 594   tiling clone,   594/594
(100 %)
0 diff
(100 %id)
DC416511 trachea .e 6 to 583 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DC417890 trachea .e 43 to 597 1 to 555       555/555
(100 %)
0 diff
(100 %id)
AK304342 trachea .e 46 to 1045 1 to 1000       1000/1000
(100 %)
0 diff
(100 %id)
NM_001162435.1   .e 46 to 1045 1 to 1000   RefSeq,   1000/1000
(100 %)
0 diff
(100 %id)
DC415514 trachea .e 46 to 605 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC418108 trachea .e 46 to 640 1 to 595       595/595
(100 %)
0 diff
(100 %id)
DN831708 pooled .e 317 to 501 185 to 1     Submitted on the opposite strand 185/186
(99 %)
1 diff
(99.5 %id)
BU608132 Human Lung Epithelial cells, lung .e 340 to 1055 734 to 19   tiling clone, AAA   716/716
(100 %)
1 diff
(99.9 %id)
DN831709 pooled .e 410 to 581 1 to 172       172/181
(95 %)
2 diff
(98.9 %id)
TI_159723931   .e 700 to 1344 727 to 84   AAA   644/650
(99 %)
3 diff
(99.6 %id)
CA944623 Human Lung Epithelial cells, lung .e 710 to 1344 652 to 19   tiling clone, AAA   634/634
(100 %)
2 diff
(99.7 %id)
DT932620 pooled .f 1 to 676 683 to -6   tiling clone, Submitted on the opposite strand 683/694
(98 %)
14 diff
(98.0 %id)
TI_977333782   .f 17 to 727 17 to 728   tiling clone, fully sequenced,   712/728
(97 %)
21 diff
(97.2 %id)
DT932619 pooled .f 20 to 712 1 to 694   tiling clone,   696/694
(100 %)
24 diff
(96.6 %id)
TI_977333781   .f 324 to 689 376 to 11   tiling clone, fully sequenced,   366/376
(97 %)
0 diff
(100 %id)
BP383257 ilea mucosa .g 1 to 590 1 to 591 K41X Q62X R69X H136X Q139X ... tiling clone,   591/592
(99 %)
6 diff
(99.0 %id)
BP271380 small intestine .h 1 to 584 1 to 584 exact tiling clone,   584/584
(100 %)
0 diff
(100 %id)
AK057637 trachea .i 1 to 2550 2 to 2551 exact tiling clone, available from FLJ,   2551/2551
(100 %)
2 diff
(100.0 %id)
DB194828 trachea .i 1 to 510 2 to 511 exact capped   510/510
(100 %)
0 diff
(100 %id)
BF881969 lung_tumor .i 1226 to 1743 12 to 534       523/534
(97 %)
6 diff
(98.9 %id)
DB347990 trachea .i 2006 to 2550 546 to 1       546/546
(100 %)
3 diff
(99.5 %id)
DB096692 testis .j 1 to 553 2 to 554 exact tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
BP383033 ilea mucosa Gene MEP1A, variant not shown         This clone was ignored    
BP270573 small intestine Gene MEP1A, variant not shown         This clone was ignored    
BP271060 small intestine Gene MEP1A, variant not shown         Suspected internal deletion, this clone was ignored    
DA431818 colon Gene MEP1A, variant not shown       capped Suspected internal deletion, this clone was ignored    
T83149 liver and spleen Gene MEP1A, variant not shown         This clone was ignored    
T90623 liver and spleen Gene MEP1A, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI