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Gene MEGF11TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
85 supporting clones for gene MEGF11 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_032445.2   .a 1 to 5914 1 to 5914 exact RefSeq,   5914/5914
(100 %)
0 diff
(100 %id)
TI_1520874347   .a 77 to 1250 44 to 1220   tiling clone,   1177/1259
(93 %)
34 diff
(97.3 %id)
TI_1520874913   .a 77 to 1187 45 to 1157       1113/1249
(89 %)
19 diff
(98.5 %id)
TI_1320133195   .a 77 to 908 243 to 1073     Submitted on the opposite strand 831/1086
(76 %)
8 diff
(99.3 %id)
BC117419 Brain, cerebral cortex and lung, PCR rescuedclones .a 81 to 3376 1 to 3296   tiling clone,   3296/3296
(100 %)
3 diff
(100.0 %id)
BC126313 Brain, cerebral cortex and lung, PCR rescuedclones .a 81 to 3376 1 to 3296       3296/3296
(100 %)
3 diff
(100.0 %id)
AB300051 brain .a 142 to 3276 1 to 3135   tiling clone,   3135/3135
(100 %)
2 diff
(100.0 %id)
DR003506 hippocampus .a 152 to 647 9 to 504       496/504
(98 %)
10 diff
(98.1 %id)
TI_1520877711   .a 535 to 958 425 to 3       423/687
(61 %)
7 diff
(99.0 %id)
BG702195 brain, hippocampus .a 535 to 947 311 to 727       417/732
(56 %)
23 diff
(96.9 %id)
TI_1520876245   .a 609 to 1429 8 to 829       822/1053
(78 %)
10 diff
(99.1 %id)
TI_1320129942   .a 673 to 1212 642 to 1172       531/594
(89 %)
19 diff
(96.9 %id)
TI_1320129944   .a 673 to 1042 640 to 1006       367/498
(73 %)
15 diff
(97.0 %id)
TI_1320133201   .a 784 to 1923 8 to 1149       1140/1150
(99 %)
27 diff
(97.7 %id)
CD633960   .a 816 to 1317 503 to 1       503/503
(100 %)
5 diff
(99.1 %id)
TI_1520877707   .a 1003 to 1714 721 to 10       712/721
(98 %)
1 diff
(99.9 %id)
TI_1320131995   .a 1064 to 2084 1016 to 3       1014/1141
(88 %)
25 diff
(97.9 %id)
TI_1520877709   .a 1126 to 1925 805 to 8       798/805
(99 %)
9 diff
(98.9 %id)
TI_1520877713   .a 1251 to 2082 840 to 8       833/847
(98 %)
15 diff
(98.3 %id)
BF529240 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1282 to 2064 1 to 776       776/779
(99 %)
14 diff
(98.3 %id)
CD633956   .a 1378 to 1963 1 to 586       586/629
(93 %)
5 diff
(99.3 %id)
EL955149 eyeball .a 1423 to 2019 1 to 595       593/595
(99 %)
6 diff
(99.0 %id)
TI_1520874957   .a 1470 to 2227 805 to 44     Submitted on the opposite strand 762/809
(94 %)
24 diff
(97.1 %id)
CD633957   .a 1577 to 2282 704 to 1       704/704
(100 %)
10 diff
(98.6 %id)
CD633958   .a 1594 to 1876 285 to 2       284/285
(99 %)
0 diff
(100 %id)
CD633959   .a 1594 to 1883 1 to 290       290/291
(99 %)
7 diff
(97.6 %id)
TI_1320130063   .a 1847 to 3072 1 to 1212       1212/1258
(96 %)
22 diff
(98.3 %id)
TI_1520874959   .a 2156 to 3206 21 to 1058       1038/1200
(86 %)
16 diff
(98.7 %id)
TI_1320129948   .a 2357 to 2755 1081 to 688       394/482
(81 %)
8 diff
(98.4 %id)
TI_1320130133   .a 2733 to 3376 1 to 643       643/1268
(50 %)
8 diff
(99.4 %id)
TI_1320130065   .a 3054 to 3376 11 to 333       323/1262
(25 %)
7 diff
(99.5 %id)
TI_1320130064   .a 3115 to 3376 718 to 979       262/538
(48 %)
1 diff
(99.9 %id)
DA156943 amygdala .a 3182 to 3754 2 to 574   tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
BF529771 anaplastic oligodendroglioma with 1p/19qloss, brain .a 3250 to 4040 1 to 793       793/834
(95 %)
24 diff
(97.2 %id)
DA335680 hippocampus .a 3582 to 4154 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BF529317 anaplastic oligodendroglioma with 1p/19qloss, brain .a 3653 to 4129 162 to 637       476/637
(74 %)
6 diff
(99.1 %id)
AI936445 pooled .a 3689 to 4053 1 to 364     Submitted on the opposite strand 364/364
(100 %)
3 diff
(99.2 %id)
DB333653 Spleen .a 3690 to 4255 1 to 566   tiling clone, Submitted on the opposite strand 566/566
(100 %)
1 diff
(99.9 %id)
BX115072 pooled .a 3693 to 4086 393 to 1     Submitted on the opposite strand 393/393
(100 %)
1 diff
(99.8 %id)
DA150188 amygdala .a 3814 to 4378 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
AK090663 cerebellum .a 3867 to 5914 1 to 2048   tiling clone, available from FLJ,   2048/2048
(100 %)
2 diff
(100.0 %id)
DA057234 cerebellum .a 3868 to 4471 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
DA055073 cerebellum .a 3996 to 4556 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
AW131768 brain, medulloblastoma .a 4291 to 4850 560 to 1       560/560
(100 %)
0 diff
(100 %id)
BM723031 eye, fetal eye .a 4742 to 5356 1 to 615   tiling clone, fully sequenced,   615/615
(100 %)
0 diff
(100 %id)
DA119637 cerebellum .a 4860 to 5422 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
AW293834   .a 5312 to 5909 616 to 18   AAA   599/599
(100 %)
4 diff
(99.4 %id)
BM677486 eye, fetal eye .a 5326 to 5909 602 to 19   fully sequenced, AAA   584/584
(100 %)
0 diff
(100 %id)
DB296678 cerebellum .a 5359 to 5914 556 to 1       556/556
(100 %)
0 diff
(100 %id)
DB301964 amygdala .a 5372 to 5909 538 to 1       538/538
(100 %)
1 diff
(99.9 %id)
CR747004 anaplastic oligodendroglioma with 1p/19qloss, brain .b 1 to 469 12 to 480       477/480
(99 %)
0 diff
(100 %id)
BC029999 Brain, anaplastic oligodendroglioma with1p/19q loss .b 1 to 3146 1 to 3146   tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 3146/3162
(99 %)
3 diff
(100.0 %id)
BF347336 anaplastic oligodendroglioma with 1p/19qloss, brain .b 132 to 564 133 to 566   available from MGC,   434/876
(49 %)
11 diff
(98.8 %id)
DA128180 cerebellum .b 3159 to 3721 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DA167819 amygdala .b 3353 to 3922 2 to 571   tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
AB058677 brain .c 1 to 5702 1 to 5702 H242R L786F tiling clone, available from KIAA,   5702/5702
(100 %)
5 diff
(100.0 %id)
AL044960 testis .d 1 to 333 1 to 333   tiling clone,   333/333
(100 %)
1 diff
(99.7 %id)
AL834326 testis .d 24 to 3242 14 to 3232   tiling clone, available from DKFZ, AAA   3219/3219
(100 %)
2 diff
(100.0 %id)
AA621772   .d 2840 to 3248 408 to 1       408/408
(100 %)
2 diff
(99.6 %id)
BI829828 brain, medulla .e 1 to 764 1 to 779 G18V H70R H169Q S170Q I171H ... tiling clone,   777/784
(99 %)
28 diff
(96.5 %id)
TI_57176394   .e 1 to 764 68 to 846 G18V H70R H169Q S170Q I171H ...     777/851
(91 %)
34 diff
(96.1 %id)
BM563529 brain, medulla .f 1 to 864 1 to 867 H21R C169L T170Y C171L K172Q ... tiling clone,   865/1123
(77 %)
27 diff
(97.6 %id)
BF528338 anaplastic oligodendroglioma with 1p/19qloss, brain .g 1 to 455 177 to 630 P115A A129L E130R P131H H132T ... tiling clone,   454/654
(69 %)
18 diff
(97.3 %id)
AW293880   .h 1 to 444 462 to 18 L51I A55G H58T S59L P60T ... tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 445/462
(96 %)
4 diff
(99.2 %id)
AY358226   .i 1 to 909 1 to 909 exact tiling clone,   909/909
(100 %)
0 diff
(100 %id)
AA496109   .i 1 to 543 1 to 541   fully sequenced, to resequence,   541/541
(100 %)
2 diff
(99.7 %id)
AA496110   .i 491 to 910 423 to 4   fully sequenced, to resequence,   420/423
(99 %)
0 diff
(100 %id)
DA401974 thalamus .i 903 to 1480 2 to 579   tiling clone, capped   578/578
(100 %)
0 diff
(100 %id)
DB312208 thalamus .i 2138 to 2701 564 to 1   tiling clone,   564/564
(100 %)
2 diff
(99.7 %id)
BX090443   .j 1 to 524 1 to 523 S2I tiling clone,   523/523
(100 %)
2 diff
(99.7 %id)
AA861104   .j 473 to 1008 540 to 4   tiling clone,   537/540
(99 %)
1 diff
(99.9 %id)
DW460922 Liver .k 1 to 118 133 to 16   tiling clone,   118/133
(88 %)
0 diff
(100 %id)
DA110984 cerebellum .k 19 to 595 3 to 579 exact tiling clone, capped   577/578
(99 %)
0 diff
(100 %id)
AW103176 pooled .l 1 to 301 313 to 13 S40F tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 301/313
(96 %)
0 diff
(100 %id)
CR736859   .m 1 to 747 1 to 748 C3W G4W P6A A7C T8H ... tiling clone,   748/748
(100 %)
2 diff
(99.8 %id)
BF515086   .n 1 to 277 294 to 18 R11G R16S tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 277/294
(94 %)
2 diff
(99.4 %id)
DB454624 testis .o 1 to 472 1 to 472 exact tiling clone,   472/472
(100 %)
0 diff
(100 %id)
BG723164 testis .p 1 to 765 1 to 758 P54A G74D H75I L76W A77P ... tiling clone,   758/758
(100 %)
19 diff
(97.5 %id)
DA214792 brain .q-u 1 to 544 2 to 545 exact tiling clone, capped   544/544
(100 %)
0 diff
(100 %id)
DB520037 testis .r 1 to 454 1 to 454 exact tiling clone, Submitted on the opposite strand 454/454
(100 %)
1 diff
(99.8 %id)
BG819765 anaplastic oligodendroglioma with 1p/19qloss, brain .r 192 to 457 1 to 266   tiling clone, AAA   266/266
(100 %)
0 diff
(100 %id)
AI027310   .s-u 1 to 422 423 to 2 exact tiling clone,   422/423
(99 %)
0 diff
(100 %id)
AI937692 anaplastic oligodendroglioma, brain .s-u 92 to 420 330 to 1       330/330
(100 %)
3 diff
(99.1 %id)
AI919451 anaplastic oligodendroglioma, brain .s-u 253 to 440 207 to 20   tiling clone, AAA   188/188
(100 %)
1 diff
(99.5 %id)
TI_1520876243   Gene MEGF11, variant not shown         This clone was ignored    
CD633961   Gene MEGF11, variant not shown         This clone was ignored    
CV346630 uterus Gene MEGF11, variant not shown              
DB317335 brain Gene MEGF11, variant not shown         This clone was ignored    
DA523483 brain Gene MEGF11, variant not shown       capped This clone was ignored    
AA293781   Gene MEGF11, variant not shown         This clone was ignored    
AA398355   Gene MEGF11, variant not shown       AAA This clone was ignored    
DB036891 testis Gene MEGF11, variant not shown       capped This clone was ignored    
DB337510 testis Gene MEGF11, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q-u, .r, .s-u, .t-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI