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Gene MEGF10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
115 supporting clones for gene MEGF10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA240513 brain .a 1 to 596 2 to 597   tiling clone, capped   596/596
(100 %)
0 diff
(100 %id)
DR003715 hippocampus .a 1 to 649 9 to 657       649/657
(98 %)
9 diff
(98.7 %id)
DA026964   .a 37 to 599 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA299107 hippocampus .a 64 to 634 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
CR749437 retina .a 66 to 7631 1 to 7563 D543G tiling clone, available from DKFZ, AAA   7563/7563
(100 %)
13 diff
(99.9 %id)
DA213604 brain .a 79 to 623 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA323882 hippocampus .a 81 to 629 2 to 550   capped   549/563
(97 %)
1 diff
(99.9 %id)
DA400735 thalamus .a 82 to 613 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
CN367742 embryonic stem cells, cell lines H1, H7, andH9 .a 86 to 429 1 to 343       343/346
(99 %)
5 diff
(98.6 %id)
CN367743 embryonic stem cells, cell lines H1, H7, andH9 .a 95 to 355 1 to 261       261/262
(99 %)
5 diff
(98.1 %id)
DA811649 brain .a 153 to 714 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
TI_1971555197   .a 182 to 1208 84 to 1102       1019/1306
(78 %)
28 diff
(97.9 %id)
DA268719 caudate nucleus .a 278 to 849 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AK123568 tongue, tumor tissue .b 1 to 7797 2 to 2952   tiling clone, available from FLJ, Suspected internal deletion 2952/2952
(100 %)
1 diff
(100.0 %id)
DA441225 tongue, tumor tissue .b 1 to 574 2 to 575   capped Suspected internal deletion 574/574
(100 %)
0 diff
(100 %id)
DB313720 tongue, tumor tissue .b 2423 to 7797 530 to 1   tiling clone, Suspected internal deletion 530/530
(100 %)
1 diff
(99.9 %id)
NM_032446.2   .c 1 to 7688 2 to 7689 exact RefSeq,   7689/7689
(100 %)
0 diff
(100 %id)
DA318663 hippocampus .c 28 to 592 2 to 567   tiling clone, capped   566/566
(100 %)
2 diff
(99.7 %id)
DA241943 brain .c 81 to 660 2 to 581   tiling clone, capped   580/580
(100 %)
1 diff
(99.9 %id)
BG828819 muscle, rhabdomyosarcoma .c 95 to 773 1 to 680   available from MGC,   680/755
(90 %)
6 diff
(99.3 %id)
AB058676 hippocampus .c 159 to 7682 1 to 7522 exact tiling clone, available from KIAA,   7522/7522
(100 %)
7 diff
(100.0 %id)
BC152478 Clones donated by Kazusa DNA Research Inst. .c 159 to 7682 1 to 7522 exact AAA   7522/7522
(100 %)
7 diff
(100.0 %id)
BP311016 brain .c 296 to 878 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
CD633970   .c 825 to 1338 8 to 521       514/522
(98 %)
8 diff
(98.5 %id)
CD633971   .c 825 to 1338 514 to 1       514/521
(98 %)
0 diff
(100 %id)
CD633972   .c 825 to 1338 8 to 520       513/521
(98 %)
7 diff
(98.7 %id)
CD633973   .c 825 to 1338 514 to 1       514/521
(98 %)
0 diff
(100 %id)
CD633974   .c 825 to 1338 515 to 1       515/522
(98 %)
2 diff
(99.7 %id)
CD633975   .c 825 to 1338 8 to 521       514/522
(98 %)
7 diff
(98.7 %id)
CD633976   .c 825 to 1338 8 to 521       514/522
(98 %)
7 diff
(98.7 %id)
CD633977   .c 825 to 1338 514 to 1       514/521
(98 %)
0 diff
(100 %id)
DA738723   .c 1778 to 2334 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
CD633978   .c 1895 to 2076 182 to 1       182/184
(98 %)
0 diff
(100 %id)
CD633980   .c 1895 to 2076 182 to 1       182/184
(98 %)
0 diff
(100 %id)
CD633979   .c 1903 to 2076 1 to 174       174/175
(99 %)
3 diff
(98.3 %id)
CD633981   .c 1903 to 2076 1 to 173       173/174
(99 %)
2 diff
(98.9 %id)
CD633962   .c 2438 to 2515 8 to 85       78/86
(90 %)
7 diff
(91.9 %id)
CD633963   .c 2438 to 2515 78 to 1       78/85
(91 %)
0 diff
(100 %id)
CD633964   .c 2438 to 2515 8 to 85       78/86
(90 %)
7 diff
(91.9 %id)
CD633965   .c 2438 to 2515 78 to 1       78/85
(91 %)
0 diff
(100 %id)
CD633967   .c 2438 to 2514 8 to 84       77/85
(90 %)
7 diff
(91.8 %id)
CD633968   .c 2438 to 2515 8 to 85       78/86
(90 %)
7 diff
(91.9 %id)
CD633969   .c 2438 to 2515 78 to 1       78/85
(91 %)
0 diff
(100 %id)
CD633982   .c 2781 to 3039 259 to 1       259/259
(100 %)
0 diff
(100 %id)
CD633983   .c 2782 to 3039 1 to 254       254/255
(99 %)
9 diff
(96.5 %id)
BY798513 eye .c 2873 to 3321 1 to 449       449/449
(100 %)
0 diff
(100 %id)
H15471 whole brain .c 2987 to 3460 1 to 487       487/488
(99 %)
27 diff
(94.5 %id)
DA246758 brain .c 2990 to 3581 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DA231657 brain .c 2992 to 3522 2 to 535   capped   534/534
(100 %)
6 diff
(98.9 %id)
DB180600 kidney, tumor tissue .c 2994 to 3561 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
Z43452 brain, total brain .c 3000 to 3265 1 to 265       265/265
(100 %)
4 diff
(98.5 %id)
DA333226 hippocampus .c 3005 to 3586 2 to 584   capped   583/583
(100 %)
3 diff
(99.5 %id)
DA221530 brain .c 3096 to 3649 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA319091 hippocampus .c 3192 to 3675 2 to 487   capped   486/486
(100 %)
2 diff
(99.6 %id)
DA184696 amygdala .c 3348 to 3852 2 to 507   capped   506/506
(100 %)
3 diff
(99.5 %id)
DA188817 amygdala .c 3586 to 4130 2 to 546   tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
DA329149 hippocampus .c 3622 to 4287 2 to 666   capped   665/665
(100 %)
4 diff
(99.4 %id)
AW900673 nervous_normal .c 3673 to 4033 368 to 9       360/368
(97 %)
0 diff
(100 %id)
DB087690 testis .c 3972 to 4520 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DA102152 cerebellum .c 4009 to 4597 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DA408544 thalamus .c 4071 to 4631 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA238870 brain .c 4135 to 4726 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
BQ446234 Knee, Osteoarthritic Cartilage .c 4358 to 5062 715 to 11   AAA   705/705
(100 %)
1 diff
(99.9 %id)
DA290505 hippocampus .c 4434 to 5007 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA257316 caudate nucleus .c 4437 to 4959 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DB324579   .c 4523 to 5082 559 to 1       559/559
(100 %)
3 diff
(99.5 %id)
DA136529 alzheimer cortex .c 4538 to 5083 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BX110055 whole brain .c 4552 to 5084 546 to 15   AAA   532/532
(100 %)
1 diff
(99.9 %id)
AI968440 pooled germ cell tumors .c 4576 to 5083 509 to 2       508/509
(99 %)
0 diff
(100 %id)
BF057268 pooled germ cell tumors .c 4617 to 5083 468 to 2       467/468
(99 %)
0 diff
(100 %id)
DA505994 brain .c 4634 to 5164 2 to 534   capped   533/533
(100 %)
3 diff
(99.5 %id)
H15416 whole brain .c 4679 to 5084 426 to 12   AAA   415/421
(98 %)
16 diff
(96.2 %id)
TI_1971555287   .c 4684 to 5703 1121 to 116       1006/1224
(82 %)
0 diff
(100 %id)
R41241 whole brain .c 4692 to 5084 416 to 12   AAA   405/409
(99 %)
30 diff
(92.7 %id)
Z39528 brain, total brain .c 4779 to 5084 306 to 1       306/306
(100 %)
0 diff
(100 %id)
T26970   .c 4848 to 5084 237 to 1       237/237
(100 %)
0 diff
(100 %id)
DB176155 kidney, tumor tissue .c 4910 to 5473 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA257982 caudate nucleus .c 4941 to 5532 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DA341154 substantia nigra .c 4942 to 5486 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
BM721175 eye, fetal eye .c 4982 to 5757 1 to 776       776/776
(100 %)
2 diff
(99.8 %id)
AW594678 pooled germ cell tumors .c 4995 to 5080 90 to 5       399/483
(82 %)
11 diff
(97.8 %id)
EB385786 eye, optic nerve .c 5061 to 5809 1 to 750       750/750
(100 %)
1 diff
(99.9 %id)
BQ932678 sciatic nerve .c 5089 to 5627 1 to 542       542/1439
(37 %)
16 diff
(98.9 %id)
DB176821 kidney, tumor tissue .c 5109 to 5654 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
AL118579 amygdala .c 5187 to 5887 1 to 699       699/701
(99 %)
4 diff
(99.5 %id)
DB166670 kidney, tumor tissue .c 5240 to 5787 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DA171686 amygdala .c 5355 to 5878 2 to 525   capped   524/524
(100 %)
4 diff
(99.3 %id)
AV721635 hypothalamus .c 5385 to 5772 1 to 384       384/391
(98 %)
5 diff
(98.8 %id)
DR761394 embryonic stem .c 5852 to 6580 1 to 729       729/729
(100 %)
2 diff
(99.8 %id)
AK021631 whole embryo, mainly head .c 5981 to 7682 1 to 1702   tiling clone, available from FLJ,   1702/1702
(100 %)
2 diff
(99.9 %id)
AU118297 whole embryo, mainly head .c 5982 to 6843 2 to 864   capped   863/863
(100 %)
3 diff
(99.7 %id)
AV729371 hypothalamus .c 6980 to 7556 1 to 579       579/610
(94 %)
10 diff
(98.4 %id)
CA411720 Chondrosarcoma Grade II, Left Pelvis .c 7013 to 7682 686 to 19   AAA   668/668
(100 %)
5 diff
(99.3 %id)
DB310120 substantia nigra .c 7135 to 7682 548 to 1       548/548
(100 %)
5 diff
(99.1 %id)
DB306563 caudate nucleus .c 7137 to 7682 545 to 1       545/545
(100 %)
4 diff
(99.3 %id)
DB303286 amygdala .c 7138 to 7682 544 to 1       544/544
(100 %)
3 diff
(99.5 %id)
AU144892 whole embryo, mainly head .c 7140 to 7682 543 to 1       543/546
(99 %)
7 diff
(98.8 %id)
AI148353 heart .c 7215 to 7688 473 to 2       472/488
(96 %)
0 diff
(100 %id)
AA704670 pineal gland .c 7249 to 7542 292 to 1       292/292
(100 %)
2 diff
(99.4 %id)
AW970065   .c 7253 to 7682 110 to 537   AAA   428/537
(79 %)
6 diff
(98.9 %id)
AA483199 alveolar rhabdomyosarcoma .c 7262 to 7688 432 to 6       427/432
(98 %)
0 diff
(100 %id)
AA482705 alveolar rhabdomyosarcoma .c 7264 to 7688 1 to 423   tiling clone,   423/425
(99 %)
3 diff
(99.3 %id)
AA664961 alveolar rhabdomyosarcoma .c 7394 to 7688 1 to 296       296/306
(96 %)
9 diff
(97.1 %id)
DA186892 amygdala .d 1 to 541 2 to 542   tiling clone, capped   541/541
(100 %)
1 diff
(99.9 %id)
DB303175 amygdala .d 3464 to 4012 548 to 1   tiling clone,   548/548
(100 %)
4 diff
(99.3 %id)
BC020198 Muscle, rhabdomyosarcoma .e 1 to 2237 1 to 2237 exact tiling clone, available from MGC, AAA   2237/2237
(100 %)
2 diff
(100.0 %id)
AK307919 thalamus .f 1 to 2366 1 to 2366 W520* tiling clone,   2366/2366
(100 %)
6 diff
(99.8 %id)
BP229964 brain .g 1 to 583 1 to 583 I108N K166Q C187* tiling clone,   583/583
(100 %)
4 diff
(99.4 %id)
BM719978 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h 1 to 565 1 to 565 exact tiling clone,   565/565
(100 %)
0 diff
(100 %id)
BP398177 pancreatic islet .i 1 to 598 1 to 598 exact tiling clone, Submitted on the opposite strand 598/598
(100 %)
0 diff
(100 %id)
DB307521 corpus callosum .i 535 to 1021 1 to 487   tiling clone, Submitted on the opposite strand 487/488
(99 %)
12 diff
(97.6 %id)
DA223528 brain .j-u 1 to 555 2 to 556   tiling clone, to resequence, capped   555/555
(100 %)
0 diff
(100 %id)
DA103014 cerebellum .j-u 1201 to 1739 2 to 540   tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
DA318567 hippocampus .j-u 1889 to 2442 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DA304703 hippocampus .j-u 2715 to 3297 2 to 585   tiling clone, capped   584/584
(100 %)
1 diff
(99.9 %id)
DA177614 amygdala .j-u 2819 to 3344 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DA792639 brain .j-u 2898 to 3454 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB170985 kidney, tumor tissue .j-u 3131 to 3724 2 to 595 exact tiling clone, capped   594/594
(100 %)
0 diff
(100 %id)
BI024467 marrow .j-u 3606 to 3924 332 to 13   tiling clone,   320/332
(96 %)
0 diff
(100 %id)
DR763424 embryonic stem .j-u 3764 to 4614 1 to 851   tiling clone,   851/851
(100 %)
1 diff
(99.9 %id)
DB308954 hippocampus .j-u 4914 to 5471 558 to 1   tiling clone,   558/558
(100 %)
0 diff
(100 %id)
DB299281 cerebellum .j-u 4920 to 5474 559 to 1       559/559
(100 %)
6 diff
(99.0 %id)
DB308182 hippocampus .j-u 4947 to 5479 533 to 1   tiling clone,   533/533
(100 %)
0 diff
(100 %id)
DB305095 brain .j-u 4955 to 5474 525 to 6   to resequence,   520/525
(99 %)
0 diff
(100 %id)
AA232643 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j-u 5137 to 5458 1 to 322   fully sequenced,   322/322
(100 %)
0 diff
(100 %id)
AA233710 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j-u 5340 to 5473 134 to 1   fully sequenced,   134/134
(100 %)
0 diff
(100 %id)
CD654798 Embryonic Stem cells .k-u 1 to 770 8 to 767 exact tiling clone,   760/806
(94 %)
19 diff
(97.7 %id)
DB454315.
matches multiple genes
testis .l 1 to 463 1 to 463 exact tiling clone, also hits gene pawsnoybu 463/463
(100 %)
2 diff
(99.6 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k-u, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI