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Gene MEF2BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
354 supporting clones for gene MEF2B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX473246   .a 1 to 519 1 to 520   tiling clone,   520/520
(100 %)
4 diff
(99.3 %id)
NR_027307.1   .a 26 to 2266 1 to 2241 exact RefSeq, tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 2241/2241
(100 %)
0 diff
(100 %id)
AK301086 Spleen .a 459 to 2081 1 to 1623 K284R     1623/1623
(100 %)
2 diff
(99.9 %id)
AK316328 Spleen .a 459 to 2121 1 to 1663 K284R     1663/1663
(100 %)
2 diff
(99.9 %id)
AA284341 germinal center B cell .a 1030 to 1463 1 to 429       429/429
(100 %)
5 diff
(98.9 %id)
AW404767 lymph .a 1144 to 1800 1 to 655       655/655
(100 %)
6 diff
(99.1 %id)
TI_154141819   .a 1150 to 1838 77 to 763       687/688
(99 %)
7 diff
(99.0 %id)
BG755367 B-cells, primary B-cells from tonsils (cell line) .a 1169 to 1751 1 to 581       581/835
(69 %)
12 diff
(98.6 %id)
BE561186 Burkitt lymphoma, lymph .a 1251 to 1725 1 to 476       476/1069
(44 %)
3 diff
(99.8 %id)
BE268084 Burkitt lymphoma, lymph .a 1252 to 1730 1 to 485       483/660
(73 %)
12 diff
(98.2 %id)
BE270194 Burkitt lymphoma, lymph .a 1252 to 1734 1 to 484       484/562
(86 %)
5 diff
(99.2 %id)
BE561201 Burkitt lymphoma, lymph .a 1252 to 1743 1 to 491       491/505
(97 %)
9 diff
(98.3 %id)
BE559732 Burkitt lymphoma, lymph .a 1252 to 1983 1 to 729       727/1043
(69 %)
40 diff
(96.2 %id)
BX424129 B cells (Ramos cell line) .a 1389 to 2239 847 to 1       847/847
(100 %)
29 diff
(96.6 %id)
AI660597 colon, colonic mucosa from 5 ulcerative colitispatients .a 1466 to 2264 804 to 17   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 788/808
(97 %)
36 diff
(95.6 %id)
AI678102 pooled .a 1564 to 2232 666 to 1       666/666
(100 %)
19 diff
(97.2 %id)
BM455425 lymph, lymphoma, cell line .a 1572 to 2107 1 to 537       537/1182
(45 %)
19 diff
(98.4 %id)
AI692179 pooled .a 1608 to 2266 672 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 654/659
(99 %)
25 diff
(96.3 %id)
BX413879 B cells (Ramos cell line) .a 1691 to 2265 569 to 1       569/652
(87 %)
13 diff
(98.1 %id)
BX435836.
matches multiple genes
B cells (Ramos cell line) .a 1696 to 2265 569 to 1     also hits gene ARMC6 569/574
(99 %)
4 diff
(99.4 %id)
CA310450 cell lines, Chondrosarcoma .a 1708 to 2266 580 to 17   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 564/564
(100 %)
5 diff
(99.2 %id)
TI_154002752   .a 1748 to 2267 615 to 96       520/615
(84 %)
5 diff
(99.2 %id)
CA424956 cell lines, Chondrosarcoma .a 1765 to 2266 521 to 17   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 505/505
(100 %)
4 diff
(99.3 %id)
AA284342 germinal center B cell .a 1852 to 2268 413 to 1       413/415
(99 %)
16 diff
(96.2 %id)
CB045636 colon, juvenile granulosa tumor .b 1 to 536 12 to 547   tiling clone, Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 536/547
(97 %)
6 diff
(99.0 %id)
CB045635 colon, juvenile granulosa tumor .b 1171 to 1652 502 to 20   tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 483/483
(100 %)
3 diff
(99.4 %id)
AL556789 placenta .c 1 to 696 1 to 719   tiling clone, fully sequenced,   650/650
(100 %)
14 diff
(97.9 %id)
AA017612 eye, retina .c 39 to 481 1 to 448   tiling clone,   448/448
(100 %)
5 diff
(98.9 %id)
AL578962 placenta .c 666 to 1415 852 to 90   tiling clone, fully sequenced,   763/852
(89 %)
25 diff
(97.1 %id)
AA017555 eye, retina .c 1250 to 1534 285 to 1   tiling clone,   285/287
(99 %)
4 diff
(98.7 %id)
DA877398 Prostate .d 1 to 575 2 to 576   tiling clone, capped   575/575
(100 %)
2 diff
(99.7 %id)
BC136457 Testicle, PCR rescued clones .d 311 to 1592 1 to 1282 exact tiling clone,   1282/1282
(100 %)
0 diff
(100 %id)
BC171767 Brain, cerebellum, PCR rescued clones .d 311 to 1591 1 to 1281 exact     1281/1281
(100 %)
0 diff
(100 %id)
TI_2194645727   .d 311 to 1359 61 to 1102     Submitted on the opposite strand 1042/1263
(82 %)
21 diff
(98.4 %id)
TI_2194646301   .d 311 to 1396 66 to 1137     Submitted on the opposite strand 1072/1137
(94 %)
32 diff
(97.2 %id)
CR593081 B cells (Ramos cell line) Cot 25-normalized .e 1 to 1429 1 to 1429 exact tiling clone,   1429/1429
(100 %)
0 diff
(100 %id)
BX349315   .e 483 to 1371 1 to 890       890/900
(98 %)
22 diff
(97.6 %id)
BF589773 sciatic nerve .e 969 to 1299 331 to 1       331/331
(100 %)
16 diff
(95.2 %id)
AI090438 B-cell, chronic lymphotic leukemia .e 978 to 1434 450 to 1   tiling clone,   450/450
(100 %)
62 diff
(86.3 %id)
AA721334 germinal center B cell .e 993 to 1430 454 to 21   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 434/436
(99 %)
20 diff
(95.5 %id)
AW006240 pooled germ cell tumors .e 1000 to 1431 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
AI990516 pooled germ cell tumors .e 1000 to 1431 432 to 1       432/432
(100 %)
2 diff
(99.6 %id)
AA808236 germinal center B cell .e 1004 to 1430 449 to 24   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 426/426
(100 %)
10 diff
(97.7 %id)
AI017635 pooled .e 1009 to 1431 425 to 3       423/429
(98 %)
0 diff
(100 %id)
AW050593 colon, colonic mucosa from 3 patients with Crohn'sdisease .e 1019 to 1430 436 to 26   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 411/415
(99 %)
16 diff
(96.2 %id)
BG152649 brain, glioblastoma without EGFR amplification .e 1059 to 1431 373 to 1       373/373
(100 %)
2 diff
(99.5 %id)
BG284220 adenocarcinoma, cell line, Prostate .e 1071 to 1430 1 to 360   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 360/360
(100 %)
0 diff
(100 %id)
H38850 eye, retina .e 1072 to 1296 225 to 1       225/226
(99 %)
15 diff
(93.4 %id)
AA720697 germinal center B-cells, tonsil .e 1072 to 1428 368 to 14   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 355/357
(99 %)
4 diff
(98.9 %id)
AA761632 germinal center B cell .e 1072 to 1430 382 to 25   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 358/425
(84 %)
7 diff
(98.4 %id)
AA808677 germinal center B cell .e 1072 to 1131 60 to 1       60/61
(98 %)
1 diff
(98.4 %id)
CR621883 B cells (Ramos cell line) Cot 25-normalized .e 1073 to 1428 1 to 356       356/356
(100 %)
0 diff
(100 %id)
BX363568   .e 1073 to 1427 1 to 356   fully sequenced,   356/356
(100 %)
2 diff
(99.5 %id)
AA824639 germinal center B cell .e 1076 to 1430 400 to 46   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 355/355
(100 %)
7 diff
(98.1 %id)
BF222757 pooled germ cell tumors .e 1078 to 1431 355 to 1       355/355
(100 %)
4 diff
(98.9 %id)
BX352570   .e 1118 to 1428 310 to 1   fully sequenced,   310/310
(100 %)
2 diff
(99.4 %id)
AA282642 germinal center B cell .e 1135 to 1429 13 to 300       288/300
(96 %)
6 diff
(98.0 %id)
BF507426   .e 1205 to 1430 241 to 16   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 226/226
(100 %)
5 diff
(97.8 %id)
AA737035 germinal center B cell .e 1206 to 1430 238 to 16   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 223/223
(100 %)
5 diff
(97.8 %id)
CK819803 Islets of Langerhans, Pancreas .e 1227 to 1428 1 to 202   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 202/204
(99 %)
2 diff
(99.1 %id)
BM141975 Islets of Langerhans, Pancreas .e 1243 to 1430 1 to 188   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 188/188
(100 %)
0 diff
(100 %id)
BM141750 Islets of Langerhans, Pancreas .e 1299 to 1431 146 to 14       133/146
(91 %)
0 diff
(100 %id)
AI499707 anaplastic oligodendroglioma, brain .e 1321 to 1430 132 to 23   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 110/110
(100 %)
0 diff
(100 %id)
AA748817 germinal center B cell .e 1357 to 1430 98 to 26   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 73/73
(100 %)
2 diff
(97.3 %id)
BF436666 fibrotheoma, ovary .f 1 to 444 444 to 1       444/444
(100 %)
6 diff
(98.7 %id)
AW024265 thymus, pooled .f 4 to 444 441 to 1   tiling clone,   441/441
(100 %)
2 diff
(99.6 %id)
AW771576 Kidney .f 23 to 477 455 to 1   tiling clone,   455/455
(100 %)
2 diff
(99.6 %id)
AW295697   .f 179 to 513 335 to 1   tiling clone,   335/335
(100 %)
2 diff
(99.5 %id)
NM_001145785.1   .f 498 to 1947 1 to 1450 exact RefSeq, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1450/1450
(100 %)
0 diff
(100 %id)
BP224933   .f 524 to 1105 1 to 582   tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
BP225011   .f 526 to 1107 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP224468   .f 530 to 1111 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
AW405512 lymph .f 535 to 952 1 to 418       418/418
(100 %)
5 diff
(98.9 %id)
BQ065807 lymph, lymphoma, cell line .f 539 to 1150 1 to 613       613/1162
(52 %)
2 diff
(99.9 %id)
BQ642075 lymph, lymphoma, cell line .f 539 to 1379 1 to 856       856/964
(88 %)
29 diff
(97.0 %id)
BE562206 Burkitt lymphoma, lymph .f 540 to 1200 47 to 700       657/704
(93 %)
19 diff
(97.4 %id)
BG398463 B-cells, primary B-cells from tonsils (cell line) .f 540 to 1279 1 to 725       726/837
(86 %)
27 diff
(96.8 %id)
BG341468 B-cells, primary B-cells from tonsils (cell line) .f 540 to 1257 1 to 701       670/725
(92 %)
22 diff
(97.0 %id)
BX385342   .f 541 to 1208 1 to 669       669/669
(100 %)
4 diff
(99.5 %id)
TI_154142717   .f 541 to 1150 78 to 688       611/628
(97 %)
23 diff
(96.4 %id)
CR609526 B cells (Ramos cell line) .f 542 to 1946 1 to 1405 exact tiling clone,   1405/1405
(100 %)
0 diff
(100 %id)
BX421130 B cells (Ramos cell line) .f 542 to 1484 1 to 935       935/940
(99 %)
18 diff
(98.1 %id)
BX424130 B cells (Ramos cell line) .f 542 to 1347 1 to 806       806/806
(100 %)
12 diff
(98.6 %id)
BG340853 B-cells, primary B-cells from tonsils (cell line) .f 542 to 1155 1 to 608       608/758
(80 %)
13 diff
(98.3 %id)
BQ057040 lymph, lymphoma, cell line .f 542 to 1378 1 to 840       840/1020
(82 %)
9 diff
(99.2 %id)
BQ058931 lymph, lymphoma, cell line .f 542 to 1490 1 to 962       962/1065
(90 %)
10 diff
(99.1 %id)
BQ055861 lymph, lymphoma, cell line .f 545 to 1377 1 to 835       835/1073
(77 %)
11 diff
(99.0 %id)
BQ057946 lymph, lymphoma, cell line .f 545 to 1378 1 to 841       841/1083
(77 %)
13 diff
(98.8 %id)
BQ058984 lymph, lymphoma, cell line .f 545 to 1379 1 to 837       837/1084
(77 %)
7 diff
(99.4 %id)
BQ059644 lymph, lymphoma, cell line .f 545 to 1290 1 to 754       754/1078
(69 %)
18 diff
(98.4 %id)
AW404294 lymph .f 548 to 816 1 to 269       269/269
(100 %)
4 diff
(98.6 %id)
BI224996 Burkitt lymphoma, lymph .f 549 to 968 1 to 419       419/419
(100 %)
7 diff
(98.4 %id)
BF796290 lymph, lymphoma, cell line .f 551 to 1285 1 to 733       733/818
(89 %)
14 diff
(98.3 %id)
BQ057183 lymph, lymphoma, cell line .f 554 to 1150 1 to 599       599/899
(66 %)
18 diff
(98.0 %id)
BQ059304 lymph, lymphoma, cell line .f 558 to 1377 1 to 824       824/1064
(77 %)
8 diff
(99.3 %id)
BQ642927 lymph, lymphoma, cell line .f 558 to 1283 1 to 733       733/948
(77 %)
14 diff
(98.6 %id)
BQ055511 lymph, lymphoma, cell line .f 561 to 1447 1 to 895       895/993
(90 %)
19 diff
(98.1 %id)
BX283196 lymph, lymphoma, cell line .f 563 to 1063 1 to 501       501/501
(100 %)
1 diff
(99.9 %id)
BI261426 lymph, lymphoma, cell line .f 563 to 1106 1 to 541       541/736
(73 %)
9 diff
(98.8 %id)
BQ058774 lymph, lymphoma, cell line .f 566 to 1291 1 to 730       730/1052
(69 %)
11 diff
(99.0 %id)
BQ064126 lymph, lymphoma, cell line .f 566 to 1377 1 to 811       811/1006
(80 %)
3 diff
(99.8 %id)
BE559649 Burkitt lymphoma, lymph .f 567 to 1291 1 to 718       719/987
(72 %)
15 diff
(98.5 %id)
BI262050 lymph, lymphoma, cell line .f 1372 to 1897 531 to 2       530/574
(92 %)
16 diff
(97.3 %id)
NM_005919.3   .g 1 to 1951 1 to 1951   RefSeq, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1951/1951
(100 %)
0 diff
(100 %id)
DA440390 tongue, tumor tissue .g 2 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
DA067046 cerebellum .g 19 to 597 2 to 580   tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
DB029190 testis .g 19 to 620 2 to 603   capped   602/602
(100 %)
1 diff
(99.9 %id)
TI_57176664   .g 447 to 1194 68 to 813       746/813
(91 %)
9 diff
(98.9 %id)
BI829979 brain, medulla .g 448 to 1194 1 to 745       745/745
(100 %)
3 diff
(99.6 %id)
BM172386 melanotic melanoma, high MDR (cell line), skin .g 453 to 621 9 to 178       170/194
(87 %)
19 diff
(90.3 %id)
TI_57236797   .g 460 to 1089 29 to 655       627/656
(95 %)
9 diff
(98.7 %id)
BI908493 leukocyte .g 462 to 1089 1 to 626       626/627
(99 %)
5 diff
(99.3 %id)
X68502 heart & skeletal muscle .g 479 to 1951 1 to 1473   tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1473/1473
(100 %)
1 diff
(100.0 %id)
BI256973 cervical carcinoma cell line, cervix .g 484 to 1265 1 to 781       781/841
(92 %)
5 diff
(99.5 %id)
BU152937 epithelioid carcinoma, Pancreas .g 488 to 1368 1 to 895       894/897
(99 %)
25 diff
(97.3 %id)
NR_027308.1   .h 1 to 2129 1 to 2129   RefSeq, tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 2129/2129
(100 %)
0 diff
(100 %id)
DB164793 thymus .h 4 to 596 2 to 598   capped   597/597
(100 %)
4 diff
(99.4 %id)
BM682278 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h 32 to 393 384 to 23       362/392
(92 %)
0 diff
(100 %id)
H26825 breast .h 34 to 249 1 to 216       216/221
(97 %)
2 diff
(99.1 %id)
DB489224 hypothalamus .h 392 to 862 1 to 472       472/472
(100 %)
4 diff
(99.2 %id)
R82529 placenta .h 416 to 800 15 to 410       396/426
(92 %)
24 diff
(94.4 %id)
DA937376 Spleen .h 435 to 1012 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA938564 Spleen .h 435 to 997 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB007885 cervix, tumor tissue .h 447 to 1020 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA958650 Spleen .h 451 to 948 2 to 500   capped   499/499
(100 %)
1 diff
(99.8 %id)
BI838206 pooled pancreas and spleen .h 452 to 1267 1 to 815       815/816
(99 %)
6 diff
(99.3 %id)
TI_57162843   .h 452 to 1267 31 to 845       815/846
(96 %)
12 diff
(98.6 %id)
BM797691 Ascites, stomach .h 452 to 791 1 to 340       340/340
(100 %)
1 diff
(99.8 %id)
TI_57199780   .h 460 to 1289 98 to 929       832/929
(89 %)
20 diff
(97.9 %id)
BI820070 pooled brain, lung, testis .h 461 to 1289 1 to 831       831/831
(100 %)
14 diff
(98.4 %id)
AL707724 human skeletal muscle .h 462 to 785 1 to 323       323/323
(100 %)
2 diff
(99.4 %id)
TI_57220817   .h 464 to 1298 29 to 862       834/926
(90 %)
11 diff
(98.9 %id)
X63380 placenta .h 464 to 2128 1 to 1665       1665/1671
(99 %)
3 diff
(99.9 %id)
BI758224 brain .h 472 to 1298 1 to 826       826/890
(92 %)
5 diff
(99.5 %id)
CV030071 mixed .h 475 to 833 1 to 360       360/453
(79 %)
3 diff
(99.4 %id)
T81538 liver and spleen .h 488 to 800 1 to 318       318/332
(95 %)
8 diff
(97.6 %id)
T29821 testis .h 510 to 707 1 to 198       198/198
(100 %)
0 diff
(100 %id)
CN294697 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .h 526 to 710 1 to 185       185/185
(100 %)
0 diff
(100 %id)
BC126245 Brain, cerebellum, PCR rescued clones .h 756 to 2113 1 to 1358       1358/1358
(100 %)
0 diff
(100 %id)
TI_1520877625   .h 756 to 1340 593 to 9       585/728
(80 %)
0 diff
(100 %id)
BE560647 Burkitt lymphoma, lymph .h 871 to 1576 1 to 698       698/700
(99 %)
24 diff
(96.6 %id)
BP382681 adipose tissue .h 876 to 1430 1 to 555       555/555
(100 %)
5 diff
(99.1 %id)
CB105672 Liver .h 892 to 1289 1 to 398       398/398
(100 %)
0 diff
(100 %id)
BI518696 leukocyte .h 902 to 1560 1 to 659       659/659
(100 %)
1 diff
(99.9 %id)
TI_44459896   .h 902 to 1560 30 to 688       659/688
(95 %)
7 diff
(99.0 %id)
BF794983 lymph, lymphoma, cell line .h 907 to 1677 1 to 764       764/886
(86 %)
15 diff
(98.4 %id)
BM455926 lymph, lymphoma, cell line .h 913 to 1201 12 to 300       289/300
(96 %)
6 diff
(98.0 %id)
H13976   .h 960 to 1128 1 to 169       169/169
(100 %)
7 diff
(95.9 %id)
BI000600 head_normal .h 998 to 1434 18 to 457       440/457
(96 %)
21 diff
(95.5 %id)
AW968469   .h 1011 to 1483 1 to 474       474/474
(100 %)
2 diff
(99.6 %id)
AA459471 germinal center B cell .h 1011 to 1541 1 to 530       530/530
(100 %)
16 diff
(97.0 %id)
AA287257 germinal center B cell .h 1058 to 1414 1 to 356       356/356
(100 %)
4 diff
(98.9 %id)
BE939842 uterus_tumor .h 1106 to 1390 1 to 285       285/289
(98 %)
4 diff
(98.7 %id)
AW406055 lymph .h 1116 to 1447 1 to 332       332/332
(100 %)
6 diff
(98.2 %id)
BI868835 adenocarcinoma, cell line, Liver .h 1145 to 1658 1 to 514       514/514
(100 %)
0 diff
(100 %id)
TI_57227730   .h 1145 to 1658 49 to 562       514/514
(100 %)
0 diff
(100 %id)
AA280551 germinal center B cell .h 1169 to 1408 1 to 238       238/238
(100 %)
2 diff
(99.2 %id)
BF762438 colon_est .h 1179 to 1360 183 to 4     Submitted on the opposite strand 180/183
(98 %)
0 diff
(100 %id)
BF762441 colon_est .h 1179 to 1352 182 to 10     Submitted on the opposite strand 173/182
(95 %)
0 diff
(100 %id)
BF762404 colon_est .h 1193 to 1361 180 to 9     Submitted on the opposite strand 172/185
(92 %)
6 diff
(96.8 %id)
TI_1520875691   .h 1529 to 2113 643 to 60     Submitted on the opposite strand 584/643
(90 %)
2 diff
(99.7 %id)
TI_2194646296   .h 1529 to 2114 645 to 60     Submitted on the opposite strand 586/645
(90 %)
0 diff
(100 %id)
TI_2194645348   .h 1546 to 2114 624 to 55     Submitted on the opposite strand 570/1314
(43 %)
9 diff
(99.4 %id)
TI_1520877623   .h 1653 to 1820 172 to 4       169/208
(81 %)
0 diff
(100 %id)
AI077337 B-cell, chronic lymphotic leukemia .h 1659 to 2129 482 to 12   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 471/471
(100 %)
1 diff
(99.8 %id)
DA488022 brain .i 1 to 588 2 to 589   tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
BP224848   .i 25 to 606 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CR598286 B cells (Ramos cell line) .i 39 to 1296 1 to 1258 exact tiling clone,   1258/1258
(100 %)
0 diff
(100 %id)
AL560146 B cells (Ramos cell line), B cells from Burkitt lymphoma .i 39 to 655 1 to 617   fully sequenced,   617/617
(100 %)
0 diff
(100 %id)
AL581641 B cells (Ramos cell line), B cells from Burkitt lymphoma .i 594 to 1296 702 to 1   fully sequenced,   702/702
(100 %)
2 diff
(99.8 %id)
AK057210 synovial membrane tissue from rheumatioidarthritis .j 1 to 1682 2 to 1683 exact tiling clone, available from FLJ,   1683/1683
(100 %)
1 diff
(100.0 %id)
DA971861 synovial membrane tissue from rheumatioidarthritis .j 1 to 495 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DB334808 synovial membrane tissue from rheumatioidarthritis .j 1160 to 1682 524 to 1       524/524
(100 %)
2 diff
(99.7 %id)
BE281215 choriocarcinoma, placenta .k 1 to 516 1 to 528   tiling clone,   528/886
(59 %)
25 diff
(97.2 %id)
BE279724 choriocarcinoma, placenta .k 23 to 560 1 to 538       538/538
(100 %)
1 diff
(99.9 %id)
BE278707 choriocarcinoma, placenta .k 23 to 628 1 to 611   tiling clone,   611/687
(88 %)
11 diff
(98.4 %id)
BE731078 choriocarcinoma, placenta .k 25 to 718 1 to 687       687/695
(98 %)
11 diff
(98.5 %id)
DA374724 thalamus .k 169 to 731 2 to 565   tiling clone, capped   564/564
(100 %)
3 diff
(99.5 %id)
BE267880 Burkitt lymphoma, lymph .l 1 to 643 1 to 637 Q164R S165A R166A P167I P169F ... tiling clone,   637/645
(98 %)
19 diff
(97.1 %id)
BE396961 Burkitt lymphoma, lymph .l 20 to 377 20 to 378       361/378
(95 %)
6 diff
(98.5 %id)
BC073957 Testis, embryonal carcinoma .m 1 to 1668 1 to 1204   tiling clone, available from MGC, AAA Suspected internal deletion 1204/1204
(100 %)
0 diff
(100 %id)
BQ216127 embryonal carcinoma, cell line, testis .m 2 to 1357 1 to 893   tiling clone, available from MGC, Suspected internal deletion 893/900
(99 %)
11 diff
(98.8 %id)
BM920556 pooled lung and spleen .n-u 1 to 1082 14 to 1118 P6X Y7L R8P H9P Q10P ... tiling clone,   1105/1119
(98 %)
43 diff
(96.2 %id)
AA262009 germinal center B cell .n-u 353 to 761 1 to 408   tiling clone,   408/408
(100 %)
8 diff
(98.1 %id)
BI911649 leukocyte .o 1 to 557 1 to 558 W83L T84D H85P S87L C88L ... tiling clone,   558/558
(100 %)
4 diff
(99.3 %id)
TI_57233274   .o 1 to 557 1 to 558 W83L T84D H85P S87L C88L ...     558/558
(100 %)
4 diff
(99.3 %id)
BI762549 pooled colon, kidney, stomach .p 1 to 878 1 to 885 exact tiling clone,   885/887
(99 %)
18 diff
(98.0 %id)
TI_57150924   .p 1 to 878 31 to 915 exact     885/917
(96 %)
24 diff
(97.4 %id)
DB113471 thymus .q 1 to 578 2 to 580 R40X R41S S42L L43P E45R ... tiling clone, capped   579/579
(100 %)
2 diff
(99.7 %id)
DB134032 thymus .r 1 to 541 2 to 543 R34X L35A Q36A E37G H38A ... tiling clone, capped   542/542
(100 %)
1 diff
(99.9 %id)
BM546342 ovary (pool of 3) .r 8 to 945 13 to 967 E2D E5L Q7L K9* available from MGC,   955/1061
(90 %)
46 diff
(95.7 %id)
DB154488 thymus .r 11 to 589 2 to 580 V30A tiling clone, capped   579/579
(100 %)
1 diff
(99.9 %id)
BC064537 Ovary, pooled from 3 adults .r 12 to 2878 1 to 2866 Q61R tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 2866/2866
(100 %)
21 diff
(99.3 %id)
DA634523 Kidney .r 25 to 580 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
TI_57164148   .r 259 to 772 29 to 568       538/896
(60 %)
44 diff
(95.1 %id)
BI834511 pooled pancreas and spleen .r 267 to 772 1 to 532       530/860
(61 %)
39 diff
(95.5 %id)
BF741862 bocio_tumor .r 353 to 847 16 to 509       494/510
(96 %)
4 diff
(99.3 %id)
DA583208 lung .r 425 to 1011 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA931832 Spleen .r 693 to 1242 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA627730 Kidney .r 909 to 1447 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
BF758377 colon .r 1454 to 1703 1 to 253       253/353
(71 %)
8 diff
(97.8 %id)
BF870927 lung_tumor .r 1966 to 2157 1 to 190       190/262
(72 %)
7 diff
(97.4 %id)
CV379319 bladder_tumor .r 2245 to 2671 433 to 9   tiling clone, Submitted on the opposite strand 425/433
(98 %)
13 diff
(97.0 %id)
NM_001145784.1   .s 1 to 1433 1 to 1433 exact RefSeq, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 1433/1433
(100 %)
0 diff
(100 %id)
H44375 breast .s 34 to 462 1 to 430   tiling clone,   430/430
(100 %)
10 diff
(97.7 %id)
BP244311 Kidney .s 412 to 993 1 to 579 exact tiling clone,   579/583
(99 %)
10 diff
(98.3 %id)
BG832073 epithelioid carcinoma cell line, Pancreas .s 421 to 1335 1 to 894 G62E A63P I64S Y65T T66L ...     894/901
(99 %)
27 diff
(97.1 %id)
BM804899 ovary (pool of 3) .s 423 to 1368 27 to 976 exact     950/976
(97 %)
14 diff
(98.6 %id)
BF668885 brain, primitive neuroectoderm .s 439 to 1072 1 to 619 G62E A63P I64S Y65T T66L ... available from MGC,   619/828
(74 %)
23 diff
(97.3 %id)
BC010931 Brain, primitive neuroectodermal .s 440 to 1426 5 to 991 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 987/987
(100 %)
1 diff
(99.9 %id)
DA037446   .s 441 to 896 2 to 457 exact capped   456/456
(100 %)
0 diff
(100 %id)
DA261831 caudate nucleus .s 441 to 994 2 to 555 exact capped   554/554
(100 %)
1 diff
(99.9 %id)
R66253 placenta .s 452 to 876 1 to 435 R41X S42L L43P E45R L46A ...     435/488
(89 %)
20 diff
(96.0 %id)
BF571755 melanotic melanoma, high MDR, skin .s 452 to 1037 1 to 598 V67C E68G Y69V A70R C71L ...     598/664
(90 %)
39 diff
(94.2 %id)
BG032626 breast, mammary adenocarcinoma, cell line .s 452 to 1080 1 to 625 G107A H108T S109A P110R E111R ...     625/627
(99 %)
4 diff
(99.4 %id)
AA143607 Pancreas .s 455 to 911 1 to 460 L32H Y33V R34P L35A Q36A ...     460/460
(100 %)
8 diff
(98.3 %id)
DA712034   .s 457 to 1021 2 to 566 exact capped   565/565
(100 %)
1 diff
(99.9 %id)
BX955539   .s 470 to 901 1 to 436 A25G N26Q E27R P28A S29I ...     436/436
(100 %)
4 diff
(99.1 %id)
TI_57218297   .s 471 to 1191 11 to 731 E3F P4R E5D     721/731
(98 %)
7 diff
(99.1 %id)
BQ680841 melanotic melanoma, cell line, skin .s 477 to 1291 1 to 820       820/950
(86 %)
21 diff
(97.8 %id)
BG830306 epithelioid carcinoma cell line, Pancreas .s 484 to 1207 1 to 726       726/726
(100 %)
3 diff
(99.6 %id)
T96207 liver and spleen .s 488 to 800 1 to 312       312/379
(82 %)
3 diff
(99.3 %id)
BI753525 brain .s 490 to 1191 1 to 702       702/702
(100 %)
2 diff
(99.8 %id)
BG284384 adenocarcinoma, cell line, Prostate .s 492 to 1391 1 to 901       901/981
(91 %)
46 diff
(95.4 %id)
BE890690 melanotic melanoma, skin .s 498 to 1005 1 to 508       508/508
(100 %)
4 diff
(99.3 %id)
DN991669 brain, whole brain .s 515 to 1133 1 to 619       619/619
(100 %)
1 diff
(99.9 %id)
CB121023 Liver .s 582 to 1094 1 to 513       513/513
(100 %)
3 diff
(99.5 %id)
BM824764 Ascites, stomach .s 635 to 1112 1 to 478       478/478
(100 %)
0 diff
(100 %id)
BQ939973 epidermoid carcinoma, cell line, lung .s 687 to 1427 772 to 32   AAA Submitted on the opposite strand 741/898
(82 %)
25 diff
(97.3 %id)
BE888573 leiomyosarcoma, uterus .s 691 to 1406 1 to 717       717/717
(100 %)
4 diff
(99.5 %id)
CA421006 Bone, Enchondroma cell line .s 746 to 1433 707 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 689/689
(100 %)
7 diff
(99.0 %id)
BG538455 lung .s 770 to 1205 1 to 440       440/861
(51 %)
11 diff
(98.8 %id)
AW610518 uterus .s 813 to 937 1 to 125       125/125
(100 %)
7 diff
(94.4 %id)
BU753518 placenta .s 838 to 1427 606 to 18   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 589/589
(100 %)
3 diff
(99.5 %id)
AW610490 uterus .s 954 to 1067 1 to 114       114/119
(95 %)
3 diff
(97.5 %id)
R67595 placenta .s 988 to 1399 424 to 2       423/429
(98 %)
0 diff
(100 %id)
T96125 liver and spleen .s 1089 to 1431 343 to 2       342/343
(99 %)
0 diff
(100 %id)
AA146609 Pancreas .s 1104 to 1426 327 to 1       327/327
(100 %)
15 diff
(95.5 %id)
H44376 breast .s 1105 to 1420 323 to 8       316/326
(96 %)
0 diff
(100 %id)
AI886604 ovary, tumor, 5 pooled (see description) .s 1187 to 1427 245 to 1       245/245
(100 %)
7 diff
(97.2 %id)
BP246468 Kidney .t 1 to 590 1 to 588 L24P A70T tiling clone,   588/588
(100 %)
7 diff
(98.9 %id)
DA009304 adrenal gland .t 6 to 556 2 to 552 exact tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DA760557   .t 16 to 515 2 to 499 Q7X capped   498/498
(100 %)
1 diff
(99.8 %id)
DB141067 thymus .t 16 to 528 2 to 514 exact capped   513/513
(100 %)
0 diff
(100 %id)
AK128256 thymus .t 526 to 4208 1 to 3686   tiling clone, available from FLJ,   3686/3686
(100 %)
38 diff
(99.0 %id)
DB131958 thymus .t 527 to 1078 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
AK057161 stomach .t 1135 to 3236 1 to 2102   tiling clone, available from FLJ,   2102/2106
(99 %)
22 diff
(99.0 %id)
DA962236 stomach .t 1136 to 1934 2 to 794   capped   793/795
(99 %)
29 diff
(96.4 %id)
DB334308 stomach .t 2740 to 3236 504 to 5       500/508
(98 %)
0 diff
(100 %id)
AL732280 breast .t 2976 to 3249 1 to 274   tiling clone,   274/300
(91 %)
14 diff
(95.4 %id)
DB344677 thymus .t 3838 to 4223 387 to 1   tiling clone,   387/387
(100 %)
4 diff
(99.0 %id)
NM_001145783.1   .u 1 to 1496 1 to 1496 exact RefSeq, AAA   1496/1496
(100 %)
0 diff
(100 %id)
TI_2016726549   .u 168 to 932 815 to 52 exact   Submitted on the opposite strand 764/1286
(59 %)
5 diff
(99.7 %id)
TI_2016726561   .u 168 to 932 61 to 824 exact tiling clone, Submitted on the opposite strand 764/1270
(60 %)
6 diff
(99.6 %id)
TI_2016730335   .u 168 to 932 815 to 52 exact   Submitted on the opposite strand 764/1315
(58 %)
5 diff
(99.7 %id)
TI_2016730629   .u 168 to 932 816 to 53 exact   Submitted on the opposite strand 764/1289
(59 %)
6 diff
(99.6 %id)
TI_2194698653   .u 178 to 932 63 to 817 exact     755/891
(84 %)
7 diff
(99.3 %id)
TI_2194698667   .u 178 to 932 819 to 65 exact     755/1120
(67 %)
0 diff
(100 %id)
TI_2194699375   .u 178 to 932 54 to 808 exact     755/1295
(58 %)
7 diff
(99.5 %id)
TI_2194699755   .u 178 to 932 816 to 62 exact     755/1291
(58 %)
0 diff
(100 %id)
BC171829 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .u 178 to 924 9 to 755 exact     747/755
(98 %)
6 diff
(99.3 %id)
BC157837 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .u 178 to 924 9 to 755 exact     747/755
(98 %)
6 diff
(99.3 %id)
BC157868 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .u 388 to 858 1 to 471 exact     471/471
(100 %)
0 diff
(100 %id)
TI_2194699916   .u 388 to 858 50 to 520 exact     471/1255
(37 %)
7 diff
(99.5 %id)
TI_2194700120   .u 388 to 858 50 to 520 exact     471/1255
(37 %)
7 diff
(99.5 %id)
TI_2016726625   .u 388 to 858 530 to 60 exact   Submitted on the opposite strand 471/1283
(36 %)
0 diff
(100 %id)
BC171869 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .u 388 to 850 1 to 463 exact     463/463
(100 %)
0 diff
(100 %id)
BC010178 Lung, small cell carcinoma .u 443 to 1494 1 to 1052 exact available from MGC, AAA   1052/1052
(100 %)
2 diff
(99.9 %id)
AI816339 brain, frontal lobe .u 444 to 864 1 to 421 exact     421/421
(100 %)
0 diff
(100 %id)
BG709444 brain, hypothalamus .u 448 to 1173 1 to 726 exact     726/726
(100 %)
4 diff
(99.5 %id)
BE798263 lung, small cell carcinoma .u 449 to 1268 29 to 841 L32C Y33T R34G L35C Q36R ... available from MGC,   813/842
(96 %)
19 diff
(97.8 %id)
CR624446 Neuroblastoma Cot 10-normalized .u 451 to 1491 1 to 1041 exact     1041/1041
(100 %)
0 diff
(100 %id)
AL519561 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .u 451 to 655 1 to 205   fully sequenced,   205/205
(100 %)
0 diff
(100 %id)
BX458898 placenta .u 452 to 1457 1 to 999 exact     999/1003
(99 %)
12 diff
(98.9 %id)
AW248255 lung, small cell carcinoma .u 452 to 997 10 to 555 exact available from MGC,   546/555
(98 %)
8 diff
(98.6 %id)
BC000489 Lung, small cell carcinoma .u 452 to 1494 1 to 1043 exact tiling clone, available from MGC, AAA   1043/1043
(100 %)
0 diff
(100 %id)
BC004449 Lung, small cell carcinoma .u 452 to 1494 1 to 1043 exact available from MGC, AAA   1043/1043
(100 %)
0 diff
(100 %id)
DB491567 hypothalamus .u 453 to 862 1 to 410 V30R A31G L32P Y33V R34P ...     410/410
(100 %)
8 diff
(98.1 %id)
DB505100 hypothalamus .u 453 to 904 1 to 452 exact     452/452
(100 %)
0 diff
(100 %id)
CN294696 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .u 461 to 1156 1 to 696 exact     696/696
(100 %)
5 diff
(99.3 %id)
BQ650245 hepatocellular carcinoma, cell line, Liver .u 466 to 1183 11 to 733 exact     723/948
(76 %)
22 diff
(97.7 %id)
CR620251 B cells (Ramos cell line) Cot 25-normalized .u 469 to 1490 1 to 1022 exact     1022/1022
(100 %)
0 diff
(100 %id)
AL560934 B cells from Burkitt lymphoma .u 469 to 1490 1 to 1019 Q7X L8G K9S G10R K11G ... fully sequenced,   1019/1019
(100 %)
7 diff
(99.4 %id)
N99343 whole brain .u 471 to 1325 1 to 855 E2H P4A AAA   855/1121
(76 %)
12 diff
(99.0 %id)
BF220134 lung, small cell carcinoma .u 471 to 1130 1 to 661 exact available from MGC,   661/661
(100 %)
1 diff
(99.9 %id)
BE263700 lung, small cell carcinoma .u 476 to 1135 1 to 660       660/694
(95 %)
6 diff
(99.2 %id)
F07960 brain, total brain .u 484 to 779 1 to 296       296/296
(100 %)
2 diff
(99.4 %id)
F05384 brain, total brain .u 485 to 773 1 to 289       289/289
(100 %)
0 diff
(100 %id)
F05385 brain, total brain .u 485 to 694 1 to 210       210/210
(100 %)
0 diff
(100 %id)
W37621 parathyroid gland, parathyroid tumor .u 485 to 1018 1 to 535   fully sequenced,   535/535
(100 %)
9 diff
(98.4 %id)
R15197 whole brain .u 486 to 912 1 to 436       436/437
(99 %)
26 diff
(94.1 %id)
BE798187 lung, small cell carcinoma .u 492 to 1327 19 to 847       829/1016
(81 %)
28 diff
(97.3 %id)
BE798079 lung, small cell carcinoma .u 506 to 1280 37 to 801       765/985
(77 %)
20 diff
(98.0 %id)
BE797579 lung, small cell carcinoma .u 510 to 1296 42 to 849       810/1041
(77 %)
33 diff
(96.9 %id)
TI_153987805   .u 510 to 920 520 to 110   AAA   411/582
(70 %)
8 diff
(98.7 %id)
BE793953 lung, small cell carcinoma .u 512 to 1295 1 to 783       783/869
(90 %)
12 diff
(98.7 %id)
BE794093 lung, small cell carcinoma .u 513 to 1200 1 to 683       683/683
(100 %)
8 diff
(98.9 %id)
BE795333 lung, small cell carcinoma .u 513 to 1188 1 to 676       676/676
(100 %)
2 diff
(99.8 %id)
TI_149278324   .u 527 to 1497 1067 to 103       965/1178
(81 %)
22 diff
(98.2 %id)
AW204127   .u 573 to 920 365 to 18   AAA   348/348
(100 %)
4 diff
(98.9 %id)
AL519560 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .u 594 to 1426 851 to 18   fully sequenced,   834/851
(98 %)
2 diff
(99.8 %id)
AL560904 B cells from Burkitt lymphoma .u 642 to 1473 839 to 4   fully sequenced,   836/839
(99 %)
2 diff
(99.8 %id)
BX412325.
matches multiple genes
placenta .u 767 to 1494 734 to 1     also hits gene ATP6V1G2andBAT1andSNORD84 734/825
(88 %)
26 diff
(96.9 %id)
BU678406 lung .u 883 to 1496 631 to 19   AAA   613/613
(100 %)
2 diff
(99.7 %id)
BQ017649 Chondrosarcoma, Left Pubic Bone .u 944 to 1496 569 to 17   AAA   553/568
(97 %)
1 diff
(99.9 %id)
BF338710 brain, glioblastoma with EGFR amplification .u 962 to 1496 8 to 537   AAA   530/537
(98 %)
6 diff
(98.9 %id)
W37622 parathyroid gland, parathyroid tumor .u 1004 to 1496 517 to 14   fully sequenced, AAA   504/504
(100 %)
16 diff
(96.9 %id)
AI816258 brain, frontal lobe .u 1010 to 1495 494 to 8       487/494
(98 %)
0 diff
(100 %id)
DB540664 hippocampus .u 1016 to 1496 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
DB576371 hypothalamus .u 1036 to 1496 1 to 461     Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
DB562087 hypothalamus .u 1077 to 1496 1 to 420     Submitted on the opposite strand 420/420
(100 %)
9 diff
(97.9 %id)
AI590562 brain, tumor, 5 pooled (see description) .u 1079 to 1495 417 to 1       417/417
(100 %)
1 diff
(99.8 %id)
AI620727 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .u 1085 to 1494 410 to 1       410/410
(100 %)
0 diff
(100 %id)
BM727433 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .u 1088 to 1212 1 to 125   fully sequenced,   125/125
(100 %)
0 diff
(100 %id)
BM931520 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .u 1088 to 1496 1 to 409   AAA   409/409
(100 %)
0 diff
(100 %id)
BM931564 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .u 1088 to 1207 1 to 120   fully sequenced,   120/120
(100 %)
0 diff
(100 %id)
BE045357 carcinoid, lung .u 1091 to 1495 407 to 3       405/407
(99 %)
0 diff
(100 %id)
AW160805 brain, frontal lobe .u 1104 to 1293 1 to 189   fully sequenced,   189/189
(100 %)
0 diff
(100 %id)
BF508951   .u 1104 to 1492 19 to 407     Submitted on the opposite strand 389/416
(93 %)
6 diff
(98.6 %id)
AW264142 brain, three pooled meningiomas .u 1107 to 1496 390 to 1       390/390
(100 %)
6 diff
(98.5 %id)
AI694762 carcinoid, lung .u 1112 to 1308 1 to 197     Submitted on the opposite strand 197/197
(100 %)
0 diff
(100 %id)
AI279877 placenta .u 1116 to 1496 394 to 14   AAA   381/381
(100 %)
1 diff
(99.8 %id)
AW073589 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .u 1116 to 1494 398 to 19   AAA   380/380
(100 %)
7 diff
(98.2 %id)
AA768314 germinal center B cell .u 1119 to 1494 397 to 22   AAA   376/376
(100 %)
0 diff
(100 %id)
R41645 whole brain .u 1121 to 1496 397 to 11   AAA   387/387
(100 %)
11 diff
(97.2 %id)
AA683112 germinal center B cell .u 1130 to 1494 410 to 46   AAA   365/365
(100 %)
0 diff
(100 %id)
BF949938 nervous_normal .u 1135 to 1282 150 to 5       146/165
(88 %)
0 diff
(100 %id)
BF194774 fibrotheoma, ovary .u 1139 to 1496 371 to 14   AAA   358/358
(100 %)
1 diff
(99.8 %id)
BM684021 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .u 1177 to 1496 336 to 17   fully sequenced, AAA   320/320
(100 %)
0 diff
(100 %id)
BU740895 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .u 1182 to 1496 331 to 17   fully sequenced, AAA   315/315
(100 %)
0 diff
(100 %id)
BQ186686 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .u 1188 to 1496 1 to 309   AAA   309/309
(100 %)
0 diff
(100 %id)
AI276811 adenocarcinoma, colon .u 1220 to 1496 291 to 15   AAA   277/277
(100 %)
3 diff
(99.0 %id)
AW615385 Kidney .u 1222 to 1495 278 to 5       274/278
(98 %)
0 diff
(100 %id)
Z41032 brain, total brain .u 1224 to 1496 273 to 1       273/273
(100 %)
0 diff
(100 %id)
AI648565 ovary, tumor, 5 pooled (see description) .u 1243 to 1496 254 to 1       254/256
(99 %)
0 diff
(100 %id)
F01637 brain, total brain .u 1244 to 1489 246 to 1       246/246
(100 %)
1 diff
(99.6 %id)
AA782479 parathyroid gland, parathyroid tumor .u 1258 to 1497 244 to 6   tiling clone,   239/244
(97 %)
0 diff
(100 %id)
DB529077 hippocampus .u 1262 to 1496 1 to 239     Submitted on the opposite strand 239/239
(100 %)
8 diff
(96.7 %id)
AW161637 brain, frontal lobe .u 1263 to 1503 242 to 2   fully sequenced,   241/242
(99 %)
5 diff
(98.0 %id)
F01638 brain, total brain .u 1294 to 1496 203 to 1       203/203
(100 %)
0 diff
(100 %id)
AI625228 adenocarcinoma, Pancreas .va 1 to 424 426 to 1 M48N Q49A R50A W51L E52G ... tiling clone,   426/426
(100 %)
2 diff
(99.6 %id)
BG764632 melanotic melanoma, high MDR (cell line), skin .vb 1 to 801 1 to 801 exact tiling clone,   801/823
(97 %)
10 diff
(98.8 %id)
BI037201 nervous_tumor .vb 210 to 642 1 to 433       433/433
(100 %)
29 diff
(93.4 %id)
TI_154092816   .vb 246 to 797 628 to 76   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 553/1080
(51 %)
50 diff
(95.4 %id)
BM825754 Ascites, stomach .vb 295 to 718 1 to 425   tiling clone,   425/425
(100 %)
4 diff
(99.1 %id)
AI066526 pooled germ cell tumors .vb 322 to 796 477 to 1       477/477
(100 %)
5 diff
(99.0 %id)
BE501337 pooled germ cell tumors .vb 323 to 797 476 to 1       476/476
(100 %)
4 diff
(99.2 %id)
BU609160 Human Lung Epithelial cells, lung .vb 324 to 797 492 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 474/497
(95 %)
1 diff
(99.8 %id)
BM708903 eye, RPE and Choroid .vb 348 to 797 1 to 451       451/451
(100 %)
4 diff
(99.2 %id)
DB558601 hypothalamus .vb 352 to 797 1 to 446     Submitted on the opposite strand 446/446
(100 %)
3 diff
(99.4 %id)
AI767718 Kidney .vb 359 to 803 446 to 1       446/446
(100 %)
4 diff
(99.2 %id)
BF939355 Prostate .vb 428 to 799 373 to 1       373/373
(100 %)
5 diff
(98.7 %id)
BE645617 Prostate .vb 452 to 799 348 to 1   tiling clone,   348/348
(100 %)
4 diff
(98.9 %id)
AA767602 germinal center B cell .vb 454 to 803 359 to 10   tiling clone,   350/359
(97 %)
0 diff
(100 %id)
AI949254 2 pooled tumors (clear cell type), Kidney .vb 465 to 803 345 to 7       339/345
(98 %)
0 diff
(100 %id)
R66715.
matches multiple genes
placenta .vb 469 to 769 303 to 1     also hits gene darsheyby 303/303
(100 %)
12 diff
(96.1 %id)
AI916170 colon, colon tumor, RER+ .vb 478 to 798 322 to 1       322/322
(100 %)
6 diff
(98.2 %id)
CA306505 Alveolar Macrophage, lung .vb 513 to 797 304 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 286/286
(100 %)
4 diff
(98.7 %id)
AI638481 pooled germ cell tumors .vb 533 to 747 215 to 1       215/215
(100 %)
2 diff
(99.1 %id)
AI655131 pooled germ cell tumors .vb 533 to 746 214 to 1       214/214
(100 %)
2 diff
(99.1 %id)
AI955086 pooled germ cell tumors .vb 533 to 746 214 to 1       214/214
(100 %)
2 diff
(99.1 %id)
BF592878 pooled germ cell tumors .vb 533 to 746 214 to 1       214/214
(100 %)
2 diff
(99.1 %id)
AA936141 pooled germ cell tumors .vb 534 to 746 213 to 1       213/213
(100 %)
2 diff
(99.1 %id)
AW134515   .vc 1 to 455 473 to 18 exact tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 456/456
(100 %)
4 diff
(99.2 %id)
AW137316   .vc 179 to 455 295 to 18   tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 278/278
(100 %)
6 diff
(97.9 %id)
DA991078 synovial membrane tissue from rheumatioidarthritis .vd-u 1 to 558 2 to 562 G14W R16Q G17R L18A K20E ... tiling clone, capped   561/561
(100 %)
3 diff
(99.5 %id)
DB487200.
matches multiple genes
hypothalamus .vd-u 10 to 681 1 to 668 exact tiling clone, also hits gene woychor 668/673
(99 %)
9 diff
(98.7 %id)
DA313726 hippocampus .vd-u 424 to 876 2 to 454   tiling clone, capped   453/453
(100 %)
6 diff
(98.7 %id)
AW951612   Gene MEF2B, variant not shown         This clone was ignored    
DA044562 bladder Gene MEF2B, variant not shown       capped This clone was ignored    
DB463225 hippocampus Gene MEF2B, variant not shown         Suspected internal deletion, this clone was ignored    
DB471912 hippocampus Gene MEF2B, variant not shown         Suspected internal deletion, this clone was ignored    
AA258214 germinal center B cell Gene MEF2B, variant not shown       fully sequenced, This clone was ignored    
AA259018 germinal center B cell Gene MEF2B, variant not shown       fully sequenced, This clone was ignored    
BG106511 lymph, lymphoma, cell line Gene MEF2B, variant not shown         Suspected internal deletion, this clone was ignored    
BG685409 B-cells, primary B-cells from tonsils (cell line) Gene MEF2B, variant not shown         Suspected internal deletion, this clone was ignored    
BI517881 pooled colon, kidney, stomach Gene MEF2B, variant not shown         This clone was ignored    
BM477956 lymph, lymphoma, cell line Gene MEF2B, variant not shown         This clone was ignored    
TI_45236085   Gene MEF2B, variant not shown         This clone was ignored    
DB106214 thymus Gene MEF2B, variant not shown       capped This clone was ignored    
DB342921 thymus Gene MEF2B, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI