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Gene MDM2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
347 supporting clones for gene MDM2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BQ672178 epidermoid carcinoma, cell line, salivary gland .a 1 to 601 1 to 604   tiling clone,   604/847
(71 %)
6 diff
(99.3 %id)
BC013887 Placenta, choriocarcinoma .a 3 to 2035 10 to 2042 exact AAA   2033/3838
(52 %)
4 diff
(99.9 %id)
M92424 colon .a 6 to 2371 1 to 2372 exact tiling clone,   2372/2372
(100 %)
11 diff
(99.6 %id)
NM_002392.3   .a 6 to 7374 1 to 7369 exact RefSeq,   7369/7369
(100 %)
4 diff
(100.0 %id)
Z12020   .a 6 to 2371 1 to 2372 exact     2372/2372
(100 %)
11 diff
(99.6 %id)
BE296905 muscle, rhabdomyosarcoma .a 22 to 577 1 to 555       555/555
(100 %)
3 diff
(99.5 %id)
BE900427 choriocarcinoma, placenta .a 23 to 767 1 to 747       747/778
(96 %)
16 diff
(98.0 %id)
BE300019 muscle, rhabdomyosarcoma .a 34 to 823 1 to 794   available from MGC,   794/964
(82 %)
42 diff
(95.7 %id)
AK290341 tongue, tumor tissue .a 37 to 2026 1 to 1990 exact     1990/1990
(100 %)
0 diff
(100 %id)
DA453226 tongue, tumor tissue .a 38 to 631 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
BE019522 muscle, rhabdomyosarcoma .a 59 to 468 1 to 408       408/437
(93 %)
12 diff
(97.3 %id)
TI_158434821   .a 88 to 651 51 to 614     Submitted on the opposite strand 564/1325
(42 %)
15 diff
(98.9 %id)
BF057574 fibrotheoma, ovary .a 106 to 813 1 to 708     Submitted on the opposite strand 708/709
(99 %)
4 diff
(99.5 %id)
AA214617 germinal center B cell .a 126 to 552 1 to 427     Submitted on the opposite strand 427/427
(100 %)
1 diff
(99.8 %id)
AI339173 pooled germ cell tumors .a 126 to 459 1 to 335     Submitted on the opposite strand 335/335
(100 %)
8 diff
(97.7 %id)
BE676440 B-cell, chronic lymphotic leukemia .a 126 to 601 1 to 476     Submitted on the opposite strand 476/476
(100 %)
3 diff
(99.4 %id)
R80235 placenta .a 128 to 509 2 to 392     Submitted on the opposite strand 391/456
(85 %)
14 diff
(97.0 %id)
DR006283 Prostate .a 137 to 895 1 to 759       759/759
(100 %)
7 diff
(99.1 %id)
AA810037 germinal center B cell .a 145 to 532 1 to 393     Submitted on the opposite strand 391/412
(94 %)
19 diff
(95.4 %id)
AA687987 germinal center B cell .a 239 to 365 1 to 128     Submitted on the opposite strand 128/128
(100 %)
2 diff
(98.5 %id)
R80343 placenta .a 306 to 734 432 to 1     Submitted on the opposite strand 432/482
(89 %)
6 diff
(98.8 %id)
BE765314 nervous_tumor .a 308 to 644 9 to 345       337/345
(97 %)
11 diff
(96.9 %id)
BC152384 Clones donated by HIP .a 308 to 1780 1 to 1473       1473/1473
(100 %)
3 diff
(99.8 %id)
BC152390 Clones donated by HIP .a 308 to 1780 1 to 1473       1473/1473
(100 %)
3 diff
(99.8 %id)
AJ491701   .a 311 to 454 1 to 144       144/153
(94 %)
1 diff
(99.4 %id)
BT007258   .a 311 to 1786 1 to 1476       1476/1476
(100 %)
0 diff
(100 %id)
EL736173 mixed .a 311 to 945 1 to 635       635/635
(100 %)
0 diff
(100 %id)
AI902188 breast .a 337 to 796 457 to 1       459/518
(88 %)
13 diff
(97.5 %id)
CN409877 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 390 to 790 1 to 400       400/400
(100 %)
2 diff
(99.5 %id)
AW500514 lymph .a 506 to 1117 1 to 612       612/612
(100 %)
5 diff
(99.2 %id)
AW500516 lymph .a 506 to 1076 1 to 571       571/571
(100 %)
5 diff
(99.2 %id)
TI_154154742   .a 512 to 1142 79 to 709       631/631
(100 %)
4 diff
(99.4 %id)
TI_154154791   .a 512 to 1152 79 to 719       641/642
(99 %)
1 diff
(99.9 %id)
AW176629 colon .a 517 to 1088 1 to 572       572/573
(99 %)
5 diff
(99.2 %id)
BX482386   .a 612 to 900 12 to 300       289/300
(96 %)
6 diff
(98.0 %id)
AW999946 breast_normal .a 848 to 995 148 to 1     Submitted on the opposite strand 148/148
(100 %)
0 diff
(100 %id)
DA723121   .a 1081 to 1659 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
BF081983 amnion_normal .a 1130 to 1356 1 to 227       227/227
(100 %)
5 diff
(97.8 %id)
BF350973 head_neck .a 1146 to 1356 10 to 221       212/221
(95 %)
6 diff
(97.3 %id)
BU150642 epidermoid carcinoma, cell line, salivary gland .a 1199 to 2060 3 to 875       873/892
(97 %)
25 diff
(97.2 %id)
BF949018 nervous_normal .a 1225 to 1356 16 to 147       132/147
(89 %)
6 diff
(96.0 %id)
BF949413 nervous_normal .a 1225 to 1356 16 to 147       132/147
(89 %)
6 diff
(96.0 %id)
AI927905 Kidney .a 1287 to 2029 743 to 2       742/743
(99 %)
0 diff
(100 %id)
CB162955 Liver .a 1326 to 1993 1 to 667       667/670
(99 %)
2 diff
(99.8 %id)
BE935243 marrow .a 1517 to 1958 469 to 28       442/469
(94 %)
0 diff
(100 %id)
BF155177 breast .a 1517 to 1893 1 to 377       377/377
(100 %)
0 diff
(100 %id)
DA726036   .a 1521 to 2086 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BF336925 colon .a 1645 to 1878 243 to 10       234/253
(92 %)
0 diff
(100 %id)
H13638 placenta .a 1771 to 2081 1 to 317       317/319
(99 %)
8 diff
(97.5 %id)
AA568852 liposarcoma .a 1917 to 2275 8 to 366       359/366
(98 %)
6 diff
(98.4 %id)
DA471055   .a 1946 to 2507 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA095099 cerebellum .a 1999 to 2548 2 to 551   tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
BG751134 eye, normal pigmented retinal epithelium .a 2270 to 2798 1 to 523   tiling clone,   523/842
(62 %)
14 diff
(98.4 %id)
BX485283   .a 2292 to 2782 70 to 560       491/560
(87 %)
6 diff
(99.0 %id)
BX491664   .a 2293 to 2536 1 to 244       244/244
(100 %)
0 diff
(100 %id)
CN265389 embryonic stem cells, cell lines H1, H7, andH9 .a 2296 to 2615 1 to 322       322/322
(100 %)
11 diff
(96.6 %id)
CD242030 Blood vessels - aorta, basilar and artery .a 2325 to 2546 10 to 231       222/236
(94 %)
6 diff
(97.5 %id)
BX476588   .a 2348 to 2959 1 to 607   tiling clone,   607/607
(100 %)
3 diff
(99.6 %id)
CD656174 Embryonic Stem cells .a 2822 to 3590 10 to 768       759/798
(95 %)
17 diff
(97.9 %id)
BU941461 mixed (pool of 40 RNAs) .a 2831 to 3427 1 to 614   tiling clone,   614/735
(83 %)
32 diff
(95.7 %id)
AA788913 schizophrenic brain S-11 frontal lobe .a 2901 to 3338 439 to 1       439/439
(100 %)
4 diff
(99.1 %id)
BQ952318 sciatic nerve .a 2977 to 3764 1 to 796       796/936
(85 %)
16 diff
(98.3 %id)
BG036141 adenocarcinoma, cell line, Liver .a 3003 to 3774 1 to 770       770/928
(82 %)
25 diff
(97.4 %id)
BQ001500 lung, Metastatic Chondrosarcoma .a 3006 to 3705 718 to 19   tiling clone, AAA   700/700
(100 %)
3 diff
(99.6 %id)
DA705930   .a 3010 to 3577 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
AA278542 germinal center B cell .a 3035 to 3560 1 to 526       526/526
(100 %)
8 diff
(98.5 %id)
DA816235   .a 3058 to 3627 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA829817 placenta .a 3097 to 3884 2 to 798   capped   797/836
(95 %)
16 diff
(98.1 %id)
DA021068   .a 3111 to 3683 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
BE393709 endometrium, adenocarcinoma cell line, uterus .a 3133 to 3771 1 to 628       628/633
(99 %)
23 diff
(96.4 %id)
CB269619 adipose .a 3149 to 3529 1 to 381       381/381
(100 %)
0 diff
(100 %id)
AW361153 colon .a 3164 to 3632 16 to 484       469/484
(96 %)
6 diff
(98.8 %id)
DA549465   .a 3191 to 3757 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
BX481770   .a 3239 to 3862 1 to 622       622/622
(100 %)
7 diff
(98.9 %id)
CD108521 brain, Pituitary .a 3288 to 4122 20 to 863       844/907
(93 %)
16 diff
(98.3 %id)
DA021143   .a 3290 to 3841 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
CB962090 Blood vessels - aorta, basilar and artery .a 3307 to 3677 1 to 371       371/389
(95 %)
2 diff
(99.5 %id)
DN993276 brain, whole brain .a 3323 to 3932 1 to 609       609/609
(100 %)
6 diff
(99.1 %id)
BP238877 Liver .a 3347 to 3936 1 to 590       590/590
(100 %)
6 diff
(99.0 %id)
BP244101 Liver .a 3398 to 3945 1 to 548       548/550
(99 %)
5 diff
(99.1 %id)
DA473632   .a 3404 to 3833 2 to 433   capped   432/432
(100 %)
3 diff
(99.4 %id)
DA153599 amygdala .a 3423 to 3996 2 to 575   capped   574/575
(99 %)
1 diff
(99.9 %id)
AW382106 head_neck .a 3425 to 3963 1 to 543       543/565
(96 %)
23 diff
(96.0 %id)
BC107414 Bladder, carcinoma .a 3443 to 5313 1 to 1872   AAA   1872/1872
(100 %)
5 diff
(99.8 %id)
BE568877 bladder, carcinoma, cell line .a 3466 to 4139 1 to 659       659/706
(93 %)
34 diff
(95.2 %id)
DA020832   .a 3488 to 4058 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
AW896456 nervous_normal .a 3545 to 4032 1 to 488       488/488
(100 %)
4 diff
(99.2 %id)
EH315264   .a 3595 to 3654 1 to 60       60/61
(98 %)
1 diff
(98.4 %id)
BC006795 Placenta, choriocarcinoma .a 3596 to 4549 1 to 957   available from MGC, AAA   957/957
(100 %)
1 diff
(99.9 %id)
BE018851 cervix .a 3599 to 4062 1 to 464   available from MGC,   464/464
(100 %)
0 diff
(100 %id)
AK312105   .a 3659 to 3864 1 to 206       206/206
(100 %)
0 diff
(100 %id)
DA676938   .a 3660 to 4237 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BP292129 lung .a 3667 to 4250 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
BC065505 Kidney, hypernephroma .a 3692 to 6120 1 to 2429   tiling clone, available from MGC, AAA   2429/2429
(100 %)
7 diff
(99.8 %id)
BG167913 hypernephroma, cell line, Kidney .a 3692 to 4462 11 to 784   available from MGC,   774/893
(86 %)
29 diff
(96.8 %id)
DA732666   .a 3700 to 4449 2 to 751   capped   750/750
(100 %)
4 diff
(99.5 %id)
DA730919   .a 3749 to 4530 2 to 780   capped   779/780
(99 %)
8 diff
(99.0 %id)
BE535320 cervix .a 3772 to 4529 1 to 771       771/778
(99 %)
31 diff
(96.1 %id)
BG504144 embryonal carcinoma, testis .a 3786 to 4415 1 to 634       634/636
(99 %)
10 diff
(98.5 %id)
AW630683 2 pooled high-grade transitional celltumors, genitourinary tract .a 3789 to 4191 1 to 403       403/403
(100 %)
0 diff
(100 %id)
Z28463 leg muscle, skeletal muscle .a 3795 to 3965 1 to 173       173/173
(100 %)
2 diff
(98.9 %id)
BE887601 leiomyosarcoma, uterus .a 3858 to 4580 1 to 725       725/818
(88 %)
20 diff
(97.6 %id)
BX498898 Liver .a 3873 to 4123 1 to 251       251/251
(100 %)
5 diff
(98.1 %id)
BE550872 carcinoid, lung .a 3901 to 4434 534 to 1       534/534
(100 %)
1 diff
(99.9 %id)
CB151943 cervix, Uterine .a 3915 to 4584 1 to 670       670/670
(100 %)
0 diff
(100 %id)
BF184223 bone marrow, from chronic myelogenous leukemia .a 3926 to 4569 1 to 641       641/883
(72 %)
16 diff
(98.2 %id)
BI086559 cervix .a 3941 to 4699 11 to 782       772/829
(93 %)
41 diff
(95.1 %id)
CB178521 Pancreas, Purified pancreatic islet .a 3943 to 4473 1 to 531       531/531
(100 %)
2 diff
(99.7 %id)
CB178483 Pancreas, Purified pancreatic islet .a 3943 to 4432 1 to 490       490/490
(100 %)
2 diff
(99.6 %id)
BE960642 melanotic melanoma, high MDR, skin .a 3954 to 4634 1 to 676       676/714
(94 %)
19 diff
(97.4 %id)
BF214104 bone marrow, from acute myelogenous leukemia .a 3965 to 4687 1 to 732       732/766
(95 %)
78 diff
(89.9 %id)
BQ050655 leiomyosarcoma, uterus .a 3982 to 4898 24 to 956       933/1023
(91 %)
40 diff
(96.1 %id)
BM457237 embryonal carcinoma, cell line, testis .a 4001 to 4740 23 to 766       744/1083
(68 %)
28 diff
(97.5 %id)
BI090977 cervix .a 4031 to 4657 1 to 628   AAA   628/628
(100 %)
2 diff
(99.7 %id)
BE018739 cervix .a 4032 to 4535 1 to 507       507/507
(100 %)
1 diff
(99.9 %id)
BQ014357 Chondrosarcoma, Left Pubic Bone .a 4062 to 4746 703 to 19   AAA   685/685
(100 %)
0 diff
(100 %id)
BE895518 melanotic melanoma, skin .a 4068 to 4770 1 to 705       705/972
(72 %)
37 diff
(96.2 %id)
DB374746 placenta .a 4086 to 4553 464 to 1       464/515
(90 %)
14 diff
(97.3 %id)
CB134330 Liver .a 4090 to 4676 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DA730582   .a 4102 to 4929 2 to 832   capped   831/838
(99 %)
10 diff
(98.9 %id)
BE302411 cervix .a 4110 to 4550 445 to 2   available from MGC,   444/445
(99 %)
0 diff
(100 %id)
BE468241 carcinoid, lung .a 4130 to 4552 423 to 1       423/423
(100 %)
0 diff
(100 %id)
C18743 placenta .a 4141 to 4613 15 to 484       470/486
(96 %)
14 diff
(97.2 %id)
AA321304 bone marrow .a 4164 to 4442 1 to 279       279/279
(100 %)
0 diff
(100 %id)
BE672506 carcinoid, lung .a 4212 to 4748 541 to 4       538/541
(99 %)
0 diff
(100 %id)
AA844554 parathyroid gland, parathyroid tumor .a 4226 to 4661 439 to 4       436/439
(99 %)
0 diff
(100 %id)
BG235894 blood, lymphocyte .a 4229 to 4781 553 to 1       553/553
(100 %)
0 diff
(100 %id)
AA469050 colon .a 4230 to 4544 315 to 1       315/315
(100 %)
0 diff
(100 %id)
BE550894 carcinoid, lung .a 4270 to 4747 479 to 1       479/479
(100 %)
1 diff
(99.8 %id)
CA391872 eye, RPE/choroid .a 4301 to 4722 1 to 422       422/422
(100 %)
0 diff
(100 %id)
N50744 multiple sclerosis lesions .a 4306 to 4746 449 to 1       449/453
(99 %)
14 diff
(97.0 %id)
AA825908 germinal center B cell .a 4306 to 4657 389 to 38   AAA   352/352
(100 %)
0 diff
(100 %id)
BE540675 cervix .a 4328 to 4963 1 to 625       625/877
(71 %)
39 diff
(95.6 %id)
BG533730 Liver .a 4351 to 4976 1 to 619       619/623
(99 %)
14 diff
(97.8 %id)
BM476807 leiomyosarcoma, uterus .a 4406 to 5233 1 to 825   AAA   825/825
(100 %)
9 diff
(99.0 %id)
BI088815 cervix .a 4472 to 5018 21 to 565       545/710
(76 %)
42 diff
(94.1 %id)
BX479230   .a 4480 to 4978 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
BE542187 cervix .a 4487 to 5070 29 to 607       579/726
(79 %)
6 diff
(99.2 %id)
D29140   .a 4490 to 4715 1 to 225       225/225
(100 %)
5 diff
(97.8 %id)
BG290542 bladder, transitional cell papilloma, cell line .a 4542 to 5239 1 to 697       697/697
(100 %)
15 diff
(97.9 %id)
BE539564 cervix .a 4545 to 5242 1 to 699       699/880
(79 %)
30 diff
(96.6 %id)
TI_149302260   .a 4549 to 5313 849 to 89   AAA   761/932
(81 %)
11 diff
(98.9 %id)
BE536283 cervix .a 4561 to 5201 1 to 637       637/637
(100 %)
22 diff
(96.6 %id)
AA470116   .a 4579 to 5015 1 to 437       437/437
(100 %)
0 diff
(100 %id)
BF244913 brain, glioblastoma .a 4580 to 5248 1 to 672       672/832
(80 %)
32 diff
(96.2 %id)
BF217940 brain, glioblastoma .a 4580 to 5258 1 to 675       675/875
(77 %)
44 diff
(95.0 %id)
BF219365 brain, glioblastoma .a 4580 to 5226 1 to 660       660/660
(100 %)
28 diff
(95.8 %id)
BF217440 brain, glioblastoma .a 4581 to 5277 1 to 688       688/808
(85 %)
56 diff
(93.1 %id)
CB134101 Liver .a 4585 to 5176 1 to 591       591/591
(100 %)
2 diff
(99.7 %id)
BM980488 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 4624 to 5313 707 to 19   AAA   689/689
(100 %)
1 diff
(99.9 %id)
BG616415 embryonal carcinoma, testis .a 4684 to 4945 1 to 262       262/262
(100 %)
0 diff
(100 %id)
FN146925 breast carcinoma .a 4857 to 4931 1 to 74       74/77
(96 %)
2 diff
(97.5 %id)
BE738867 hypernephroma, Kidney .a 4861 to 5431 1 to 577       577/582
(99 %)
51 diff
(91.3 %id)
AI075391 senescent fibroblast .a 4987 to 5313 357 to 33   AAA   325/325
(100 %)
15 diff
(95.4 %id)
AW609899 stomach .a 5018 to 5242 49 to 274       226/282
(80 %)
15 diff
(94.7 %id)
BM838208 Ascites, stomach .a 5031 to 5653 1 to 628       628/628
(100 %)
14 diff
(97.8 %id)
EH313888   .a 5085 to 5141 1 to 57       57/57
(100 %)
0 diff
(100 %id)
EH325459   .a 5085 to 5141 1 to 56       56/56
(100 %)
1 diff
(98.3 %id)
BF218455 brain, glioblastoma .a 5097 to 5166 529 to 599       572/701
(81 %)
30 diff
(95.8 %id)
BE925020 amnion_normal .a 5126 to 5496 371 to 1       371/371
(100 %)
6 diff
(98.4 %id)
BM474311 eye, retinoblastoma .a 5172 to 5986 14 to 839       826/1045
(79 %)
39 diff
(96.3 %id)
BX099355 liver and spleen .a 5189 to 5652 10 to 473       464/473
(98 %)
6 diff
(98.8 %id)
H58372 liver and spleen .a 5189 to 5570 8 to 392       385/398
(96 %)
5 diff
(98.8 %id)
AA769560 germinal center B cell .a 5191 to 5568 394 to 17   tiling clone, AAA   378/378
(100 %)
0 diff
(100 %id)
AA469946   .a 5223 to 5570 351 to 4       348/351
(99 %)
0 diff
(100 %id)
DB362926   .a 5227 to 5792 564 to 1       564/567
(99 %)
11 diff
(98.1 %id)
BG163554 hypernephroma, cell line, Kidney .a 5252 to 6026 1 to 778       778/858
(90 %)
28 diff
(96.8 %id)
BF344750 brain, glioblastoma with EGFR amplification .a 5286 to 5981 1 to 708       708/788
(89 %)
43 diff
(94.6 %id)
BI712625 Pancreas, Purified pancreatic islet .a 5286 to 5904 1 to 619       619/619
(100 %)
2 diff
(99.7 %id)
CK820839 Pancreas, Purified pancreatic islet .a 5330 to 5688 1 to 359     Submitted on the opposite strand 359/359
(100 %)
0 diff
(100 %id)
BF086638 placenta_normal .a 5369 to 5728 366 to 10       357/367
(97 %)
0 diff
(100 %id)
BE739311 hypernephroma, Kidney .a 5412 to 6072 670 to 2       732/767
(95 %)
14 diff
(98.2 %id)
BQ674958 epidermoid carcinoma, cell line, salivary gland .a 5427 to 5933 79 to 589       511/1410
(36 %)
24 diff
(98.3 %id)
BE542005 cervix .a 5450 to 6104 1 to 646       646/658
(98 %)
17 diff
(97.5 %id)
CA311623 Human Lung Epithelial cells, lung .a 5454 to 6120 685 to 19   AAA   667/667
(100 %)
7 diff
(99.0 %id)
CB243631 Human Lung Epithelial cells, lung .a 5492 to 6117 644 to 19   AAA   626/635
(98 %)
7 diff
(98.9 %id)
TI_149307223   .a 5493 to 6125 728 to 93   AAA   636/979
(64 %)
9 diff
(99.1 %id)
BU686729 lung, Primary Lung Epithelial Cells .a 5493 to 6125 651 to 16   AAA   636/637
(99 %)
9 diff
(98.6 %id)
CK820840 Pancreas, Purified pancreatic islet .a 5553 to 6125 607 to 35   tiling clone, AAA Submitted on the opposite strand 573/573
(100 %)
0 diff
(100 %id)
AA364152 pineal body .a 5560 to 5714 1 to 155       155/155
(100 %)
5 diff
(96.8 %id)
AI492435 Kidney .a 5626 to 6122 508 to 12   AAA   497/497
(100 %)
3 diff
(99.4 %id)
DB362467   .a 5630 to 6122 491 to 1       491/491
(100 %)
5 diff
(99.0 %id)
AW383478 head_neck .a 5631 to 6097 473 to 9       465/491
(94 %)
0 diff
(100 %id)
AW383528 head_neck .a 5631 to 6102 471 to 1       471/487
(96 %)
7 diff
(98.6 %id)
BE706819 head_neck .a 5631 to 6102 470 to 1       470/492
(95 %)
8 diff
(98.4 %id)
AI141965 pooled .a 5677 to 6122 458 to 12   AAA   447/449
(99 %)
7 diff
(98.5 %id)
BF195923 Kidney .a 5685 to 6120 436 to 1       436/436
(100 %)
3 diff
(99.4 %id)
AI984276 Prostate .a 5687 to 6130 446 to 1       446/451
(98 %)
6 diff
(98.7 %id)
DB364248   .a 5694 to 6130 435 to 1       435/443
(98 %)
10 diff
(97.8 %id)
BF110127 carcinoid, lung .a 5697 to 6124 429 to 2       428/429
(99 %)
0 diff
(100 %id)
AW383489 head_neck .a 5698 to 6080 391 to 1       391/400
(97 %)
27 diff
(93.3 %id)
CB178767 Pancreas, Purified pancreatic islet .a 5717 to 6125 409 to 1       409/409
(100 %)
0 diff
(100 %id)
BF740078 brain, glioblastoma (pooled) .a 5720 to 6200 481 to 1       481/481
(100 %)
1 diff
(99.8 %id)
AI420596 Prostate .a 5733 to 6130 398 to 1       398/398
(100 %)
0 diff
(100 %id)
AI804945 Prostate .a 5733 to 6130 398 to 1       398/398
(100 %)
0 diff
(100 %id)
CB178722 Pancreas, Purified pancreatic islet .a 5739 to 6125 387 to 1       387/387
(100 %)
0 diff
(100 %id)
CA444345 Fibrosarcoma .a 5739 to 6122 402 to 19   AAA   384/384
(100 %)
3 diff
(99.3 %id)
C15098   .a 5742 to 6122 380 to 1       380/380
(100 %)
1 diff
(99.8 %id)
AI824182 2 pooled tumors (clear cell type), Kidney .a 5742 to 6117 379 to 4       376/379
(99 %)
0 diff
(100 %id)
AI373062 Kidney .a 5750 to 6130 396 to 16   AAA   381/381
(100 %)
0 diff
(100 %id)
AI630005 blood .a 5751 to 5974 224 to 1       224/226
(99 %)
0 diff
(100 %id)
AW628147 2 pooled high-grade transitional celltumors, genitourinary tract .a 5752 to 6117 369 to 4       366/369
(99 %)
0 diff
(100 %id)
BM463523 leiomyosarcoma, uterus .a 5754 to 6763 8 to 1035       1028/1047
(98 %)
76 diff
(92.8 %id)
BI712392 Pancreas, Purified pancreatic islet .a 5758 to 6125 382 to 15   AAA   368/368
(100 %)
2 diff
(99.5 %id)
AA430124   .a 5771 to 6119 353 to 5       349/353
(98 %)
0 diff
(100 %id)
AW612168 carcinoid, lung .a 5782 to 6121 341 to 1       341/341
(100 %)
4 diff
(98.9 %id)
AA731886 germinal center B cell .a 5787 to 6125 350 to 11   AAA   340/340
(100 %)
1 diff
(99.8 %id)
CN272511 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 5788 to 6124 1 to 337       337/337
(100 %)
0 diff
(100 %id)
AI161216 brain, glioblastoma (pooled) .a 5789 to 6200 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
AW517645 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 5809 to 6127 321 to 2       320/321
(99 %)
0 diff
(100 %id)
AA358723 lung .a 5814 to 6125 1 to 314       314/317
(99 %)
17 diff
(94.7 %id)
AW962984   .a 5815 to 6125 1 to 307   AAA   307/307
(100 %)
7 diff
(97.8 %id)
BE541674 cervix .a 5821 to 6130 1 to 310   AAA   310/310
(100 %)
2 diff
(99.4 %id)
BE175114 head_neck .a 5826 to 6045 220 to 1     Submitted on the opposite strand 220/220
(100 %)
2 diff
(99.1 %id)
AA368086 placenta .a 5841 to 6117 280 to 1       280/281
(99 %)
4 diff
(98.6 %id)
AA732765   .a 5845 to 6118 278 to 5       274/278
(98 %)
0 diff
(100 %id)
BG165010 hypernephroma, cell line, Kidney .a 5849 to 6211 1 to 362       362/409
(88 %)
4 diff
(99.1 %id)
AI580816   .a 5864 to 6124 264 to 3       262/267
(98 %)
0 diff
(100 %id)
AA588635 normal prostate, Prostate .a 5870 to 6208 339 to 1       339/339
(100 %)
6 diff
(98.3 %id)
AI928306 2 pooled tumors (clear cell type), Kidney .a 5883 to 6132 251 to 2       250/282
(88 %)
0 diff
(100 %id)
AI123032 pooled .a 5889 to 6204 319 to 4       316/319
(99 %)
0 diff
(100 %id)
AI611205 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 5889 to 6132 245 to 3       243/245
(99 %)
0 diff
(100 %id)
AI928316 2 pooled tumors (clear cell type), Kidney .a 5921 to 6132 213 to 2       212/213
(99 %)
0 diff
(100 %id)
CX871690 embryonic stem .a 5945 to 6705 1 to 761       761/761
(100 %)
2 diff
(99.8 %id)
BI093227 cervix .a 5978 to 6677 1 to 714       714/811
(88 %)
38 diff
(95.4 %id)
CB106555 Liver .a 5999 to 6127 1 to 128       128/131
(97 %)
2 diff
(98.5 %id)
AA974899 2 pooled tumors (clear cell type), Kidney .a 6024 to 6122 128 to 30   AAA   99/99
(100 %)
0 diff
(100 %id)
BI090072 cervix .a 6104 to 7041 1 to 933   tiling clone,   933/935
(99 %)
44 diff
(95.3 %id)
BF934058 nervous_tumor .a 6153 to 6311 175 to 14     Submitted on the opposite strand 162/175
(92 %)
0 diff
(100 %id)
H67034 nose, olfactory epithelium .a 6161 to 6501 1 to 345       345/345
(100 %)
7 diff
(98.0 %id)
H57721 liver and spleen .a 6186 to 6585 404 to 1       404/404
(100 %)
8 diff
(98.1 %id)
H58373 liver and spleen .a 6237 to 6585 354 to 2       353/412
(85 %)
0 diff
(100 %id)
CU442835 epidermis .a 6318 to 7021 15 to 717       703/717
(98 %)
6 diff
(99.2 %id)
CU454712 epidermis .a 6318 to 6955 15 to 651       637/651
(97 %)
6 diff
(99.1 %id)
AI186124 lung .a 6329 to 6584 256 to 1       256/256
(100 %)
1 diff
(99.7 %id)
BU163783 epidermoid carcinoma, cell line, salivary gland .a 6459 to 7025 25 to 599   tiling clone,   575/1096
(52 %)
15 diff
(98.7 %id)
BE733987 choriocarcinoma, placenta .a 6488 to 7163 1 to 673       673/673
(100 %)
23 diff
(96.6 %id)
BE732830 choriocarcinoma, placenta .a 6490 to 7165 1 to 670       670/670
(100 %)
12 diff
(98.3 %id)
TI_154036554   .a 6588 to 7368 895 to 126   AAA   770/907
(84 %)
24 diff
(97.4 %id)
BX106935 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 6911 to 7364 462 to 15   tiling clone, AAA   448/448
(100 %)
2 diff
(99.6 %id)
AI805609 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 6913 to 7364 446 to 1       446/446
(100 %)
2 diff
(99.6 %id)
BU615243 Bone, Human Chondrosarcoma Cell Line .a 6971 to 7370 410 to 17   AAA   394/394
(100 %)
3 diff
(99.3 %id)
AA708958 uterus .a 7022 to 7369 353 to 6       348/353
(98 %)
0 diff
(100 %id)
H68116 nose, olfactory epithelium .a 7039 to 7358 322 to 1       322/323
(99 %)
6 diff
(98.2 %id)
BF381136 uterus_tumor .a 7040 to 7482 7 to 447       441/463
(95 %)
9 diff
(98.1 %id)
BF381110 uterus_tumor .a 7049 to 7481 1 to 433       433/443
(97 %)
11 diff
(97.6 %id)
BF381128 uterus_tumor .a 7070 to 7481 1 to 410       410/422
(97 %)
5 diff
(98.9 %id)
BU963654 mixed (pool of 40 RNAs) .a 7106 to 7368 1 to 263   tiling clone, AAA   263/263
(100 %)
0 diff
(100 %id)
BE930512 placenta_normal .a 7108 to 7604 7 to 499   tiling clone,   493/500
(98 %)
6 diff
(98.8 %id)
CB129553 Liver .a 7116 to 7369 1 to 248       248/252
(98 %)
8 diff
(96.9 %id)
GQ848196   .b 1 to 1401 1 to 1401 S370F S382C tiling clone,   1401/1401
(100 %)
2 diff
(99.9 %id)
AF092844   .c 1 to 1361 1 to 1361 exact tiling clone,   1361/1361
(100 %)
0 diff
(100 %id)
AW975448   .d 1 to 670 7 to 674   tiling clone,   668/674
(99 %)
12 diff
(98.3 %id)
AF092845   .d 192 to 1583 1 to 1391 exact tiling clone,   1391/1391
(100 %)
1 diff
(100.0 %id)
EU076748   .e 1 to 505 1 to 505   tiling clone,   505/505
(100 %)
2 diff
(99.7 %id)
AA095566   .e 28 to 137 1 to 110       110/110
(100 %)
3 diff
(97.3 %id)
U33201 primary ovarian tumor .e 75 to 1040 1 to 966 exact tiling clone,   966/966
(100 %)
0 diff
(100 %id)
AF385325 rhabdomyosarcoma tumor .f 1 to 1056 1 to 1057 exact tiling clone,   1057/1057
(100 %)
1 diff
(100.0 %id)
U33199 primary ovarian tumor .g 1 to 891 1 to 891 exact tiling clone,   891/891
(100 %)
0 diff
(100 %id)
EU076749   .h 1 to 845 1 to 845   tiling clone,   845/845
(100 %)
0 diff
(100 %id)
BM479400 eye, retinoblastoma .h 11 to 798 12 to 803       792/970
(81 %)
20 diff
(98.0 %id)
AL698123 human skeletal muscle .h 758 to 1620 862 to 1   tiling clone, Submitted on the opposite strand 862/862
(100 %)
9 diff
(99.0 %id)
DB221878 trachea .h 1021 to 1599 2 to 580   tiling clone, capped   579/579
(100 %)
2 diff
(99.7 %id)
AF201370   .i 1 to 798 1 to 798 exact tiling clone,   798/798
(100 %)
0 diff
(100 %id)
EU076747   .j 1 to 834 1 to 834 exact tiling clone,   834/842
(99 %)
3 diff
(99.7 %id)
AL704062 human skeletal muscle .j 8 to 400 1 to 393   tiling clone,   393/393
(100 %)
1 diff
(99.8 %id)
AJ278975 malignant fibrous histiocytoma .k 1 to 732 1 to 732 exact tiling clone,   732/732
(100 %)
0 diff
(100 %id)
U33200 primary ovarian tumor .l 1 to 657 1 to 657 exact tiling clone,   657/657
(100 %)
0 diff
(100 %id)
BF683210 leiomyosarcoma cell line, uterus .m 1 to 653 1 to 655 K129T Q166H E172S L173A Q174S ... tiling clone,   655/1008
(64 %)
8 diff
(99.3 %id)
AI274906 adenocarcinoma, colon .n 1 to 432 437 to 6 exact tiling clone,   432/437
(98 %)
0 diff
(100 %id)
AA937920 adenocarcinoma, colon .n 15 to 432 423 to 6 exact     418/423
(98 %)
0 diff
(100 %id)
AI346140 adenocarcinoma, colon .n 15 to 432 423 to 6 exact     418/423
(98 %)
0 diff
(100 %id)
AI336475 adenocarcinoma, colon .n 21 to 438 421 to 4 D121Y AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 418/421
(99 %)
0 diff
(100 %id)
AI246037 adenocarcinoma, colon .n 23 to 432 415 to 6 L20X Q62L     410/415
(98 %)
1 diff
(99.8 %id)
AI281316 adenocarcinoma, colon .n 23 to 432 415 to 6 exact     410/415
(98 %)
0 diff
(100 %id)
AJ278977 neurogenic sarcoma .o 1 to 393 1 to 393 exact tiling clone,   393/393
(100 %)
0 diff
(100 %id)
EU076746   .p 1 to 427 1 to 427 exact tiling clone,   427/427
(100 %)
2 diff
(99.6 %id)
BF089387 head_neck .q 1 to 388 31 to 414 R4G A5V S6V C7L F8P ... tiling clone,   384/414
(92 %)
7 diff
(98.4 %id)
BF435301 pooled .r 1 to 577 1 to 578 A19C V20C T21N T22H S23L ... tiling clone, Submitted on the opposite strand 578/578
(100 %)
2 diff
(99.7 %id)
BF435134 pooled .r 30 to 541 1 to 512 exact tiling clone, Submitted on the opposite strand 512/512
(100 %)
1 diff
(99.9 %id)
BF114786 pooled .r 30 to 537 1 to 507 exact   Submitted on the opposite strand 507/507
(100 %)
6 diff
(98.9 %id)
AW070956 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .s 1 to 486 1 to 486 L88X tiling clone, Submitted on the opposite strand 486/486
(100 %)
0 diff
(100 %id)
BQ011316 placenta .t 1 to 426 437 to 14   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 424/437
(97 %)
13 diff
(97.1 %id)
AI830622 2 pooled tumors (clear cell type), Kidney .t 231 to 636 402 to 2 S6G S50R R51I I52C C53F ... tiling clone,   397/402
(98 %)
7 diff
(98.3 %id)
AW451013   .t 253 to 624 389 to 18 exact tiling clone, AAA   372/376
(98 %)
1 diff
(99.8 %id)
AA358722 lung .t 316 to 626 311 to 1       311/311
(100 %)
8 diff
(97.5 %id)
AI478408 Kidney .t 371 to 634 264 to 1   tiling clone,   264/264
(100 %)
0 diff
(100 %id)
AA902480 pooled germ cell tumors .u 1 to 502 502 to 1 exact tiling clone,   502/502
(100 %)
2 diff
(99.7 %id)
AF201371   .va 1 to 692 1 to 692 exact tiling clone,   692/692
(100 %)
0 diff
(100 %id)
BI870852 adenocarcinoma, cell line, Liver .vb 1 to 635 1 to 635 P19A H20T N21Q N22* tiling clone,   635/635
(100 %)
16 diff
(97.5 %id)
TI_57230058   .vb 1 to 635 92 to 726 P19A H20T N21Q N22*     635/635
(100 %)
16 diff
(97.5 %id)
BF675829 Prostate .vb 274 to 822 1 to 563 L7W F9L V11C W12G V13F ... tiling clone,   563/781
(72 %)
65 diff
(91.7 %id)
CB054172 brain, glioblastoma (pooled) .vb 336 to 979 669 to 25   tiling clone, AAA   645/645
(100 %)
3 diff
(99.6 %id)
CV572277 cornea, eye .vb 347 to 984 638 to 1   tiling clone, Submitted on the opposite strand 638/638
(100 %)
8 diff
(98.8 %id)
CB131863 Liver .vb 470 to 981 515 to 3     Submitted on the opposite strand 513/515
(99 %)
8 diff
(98.5 %id)
AF385322 rhabdomyosarcoma tumor .vc 1 to 897 1 to 897 exact tiling clone,   897/897
(100 %)
0 diff
(100 %id)
AI886196 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .vd-u 1 to 440 439 to 1 S3P S5P F6* tiling clone,   439/439
(100 %)
9 diff
(98.0 %id)
CT000980 T-Lymphocytes .ve 1 to 250 1 to 250 T2A tiling clone, AAA   250/250
(100 %)
2 diff
(99.2 %id)
BC009893.
matches multiple genes
muscle, Muscle, rhabdomyosarcoma, rhabdomyosarcoma Gene C20orf117, variant not shown       AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS, this clone was ignored, also hits gene C20orf117    
BC009893.
matches multiple genes
muscle, Muscle, rhabdomyosarcoma, rhabdomyosarcoma Gene MDM2, variant not shown       AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS, this clone was ignored, also hits gene C20orf117    
BE208134.
matches multiple genes
muscle, Muscle, rhabdomyosarcoma, rhabdomyosarcoma Gene C20orf117, variant not shown         Internal priming: the 3' end of the oligo dT primed clone lies in the CDS, this clone was ignored, also hits gene C20orf117    
BE208134.
matches multiple genes
muscle, Muscle, rhabdomyosarcoma, rhabdomyosarcoma Gene MDM2, variant not shown         Internal priming: the 3' end of the oligo dT primed clone lies in the CDS, this clone was ignored, also hits gene C20orf117    
AF092843   Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AF385323 rhabdomyosarcoma tumor Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AF385324 rhabdomyosarcoma tumor Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AF385326 rhabdomyosarcoma tumor Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AF385327 rhabdomyosarcoma tumor Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ276888   Gene MDM2, variant not shown         This clone was ignored    
AJ278976 synovial sarcoma Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ278978 rhabdomyosarcoma Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ430612 Lymphocytes Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ430613 Lymphocytes Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ430614 Kidney Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ491698   Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ491699 intestine Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ491700 lung Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ550516   Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ550517   Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ550518   Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ550519   Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AJ550520   Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AW805567 uterus Gene MDM2, variant not shown         This clone was ignored    
AW816566 stomach Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AW816929 stomach Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
AW894819 nervous_normal Gene MDM2, variant not shown              
BF379684 uterus_tumor Gene MDM2, variant not shown              
BG004281 placenta_normal Gene MDM2, variant not shown              
CR743261 adenocarcinoma, colon Gene MDM2, variant not shown              
BX491680   Gene MDM2, variant not shown              
DN914286   Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
DT220838 brain Gene MDM2, variant not shown         This clone was ignored    
DA547457   Gene MDM2, variant not shown       capped Suspected internal deletion, this clone was ignored    
N49725 liver and spleen Gene MDM2, variant not shown              
N49830 liver and spleen Gene MDM2, variant not shown              
AA513307 breast Gene MDM2, variant not shown         This clone was ignored    
AA810218 germinal center B cell Gene MDM2, variant not shown         This clone was ignored    
AI090108 uterus Gene MDM2, variant not shown         This clone was ignored    
AI572270 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene MDM2, variant not shown         This clone was ignored    
AW028090 brain, glioblastoma (pooled) Gene MDM2, variant not shown         This clone was ignored    
AI952357 brain, three pooled meningiomas Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
BF516195   Gene MDM2, variant not shown       AAA This clone was ignored    
BE539677 cervix Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
BF059367 pooled germ cell tumors Gene MDM2, variant not shown         This clone was ignored    
BE566197 bladder, carcinoma, cell line Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
BE784041 eye, retinoblastoma Gene MDM2, variant not shown              
BF028138 bladder, carcinoma, cell line Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
BF130185 hypernephroma, Kidney Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
BF695009 muscle (skeletal) Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
BF978380 melanotic melanoma, high MDR, skin Gene MDM2, variant not shown         This clone was ignored    
BG532258 embryonal carcinoma, testis Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
BG571131 placenta Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
BG533074 embryonal carcinoma, testis Gene MDM2, variant not shown         This clone was ignored    
BG614376 embryonal carcinoma, testis Gene MDM2, variant not shown         This clone was ignored    
BM557395 melanotic melanoma, skin Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
DB324097   Gene MDM2, variant not shown         This clone was ignored    
TI_149276586   Gene MDM2, variant not shown       AAA Suspected internal deletion, this clone was ignored    
U33202 primary ovarian tumor Gene MDM2, variant not shown         This clone was ignored    
U33203 primary ovarian tumor Gene MDM2, variant not shown         Suspected internal deletion, this clone was ignored    
BU677277 lung, Primary Lung Epithelial Cells Gene MDM2, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BM714181 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene MDM2, variant not shown         This clone was ignored    
BU738868 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene MDM2, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd-u, .ve Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI