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Gene MCM10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
170 supporting clones for gene MCM10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_182751.2   .a 1 to 4540 2 to 4541 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 4541/4541
(100 %)
0 diff
(100 %id)
DA024424   .a 1 to 564 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DA038514   .a 7 to 581 2 to 576   capped   575/577
(99 %)
2 diff
(99.7 %id)
DA474026   .a 7 to 573 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA483937 brain .a 8 to 525 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA918371 small intestine .a 8 to 566 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AK292701 thymus .a 25 to 3181 1 to 3157 K134R     3157/3157
(100 %)
2 diff
(100.0 %id)
DA019603   .a 25 to 581 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DW430762 Liver .a 25 to 278 18 to 271       254/271
(93 %)
6 diff
(97.8 %id)
DA665848   .a 26 to 573 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DB154714 thymus .a 26 to 588 2 to 564   capped   563/563
(100 %)
4 diff
(99.3 %id)
AK055695   .a 27 to 2167 1 to 2141   available from FLJ,   2141/2141
(100 %)
2 diff
(100.0 %id)
BM833978 stomach .a 27 to 465 1 to 439       439/439
(100 %)
0 diff
(100 %id)
DA604375   .a 28 to 541 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
BC101727 Liver, PCR rescued clones .a 31 to 2793 1 to 2763 K669R tiling clone,   2763/2763
(100 %)
1 diff
(100.0 %id)
TI_927047571   .a 31 to 1067 54 to 1086       1033/1138
(90 %)
11 diff
(99.1 %id)
TI_927047866   .a 31 to 1164 47 to 1172       1126/1225
(91 %)
33 diff
(97.4 %id)
TI_927047872   .a 31 to 1064 46 to 1074       1029/1185
(86 %)
18 diff
(98.5 %id)
DA759232   .a 37 to 496 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
BM466246 embryonal carcinoma, cell line, testis .a 38 to 895 1 to 864       864/1186
(72 %)
11 diff
(99.1 %id)
CN255973 embryonic stem cells, cell lines H1, H7, andH9 .a 52 to 237 1 to 186       186/186
(100 %)
2 diff
(99.0 %id)
AV759891 bone marrow .a 79 to 592 515 to 1     Submitted on the opposite strand 515/584
(88 %)
7 diff
(98.9 %id)
CN255968 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 83 to 581 1 to 499       499/500
(99 %)
0 diff
(100 %id)
TI_927045650   .a 140 to 1098 973 to 19       955/1091
(87 %)
7 diff
(99.4 %id)
BP238338 Liver .a 319 to 843 1 to 524       524/619
(84 %)
22 diff
(96.5 %id)
TI_927045653   .a 380 to 1489 1111 to 5       1107/1215
(91 %)
6 diff
(99.6 %id)
BI860489 breast, mammary adenocarcinoma, cell line .a 416 to 1021 28 to 640       613/640
(95 %)
19 diff
(97.1 %id)
TI_57189445   .a 416 to 1021 77 to 689       613/641
(95 %)
20 diff
(96.9 %id)
TI_927044351   .a 443 to 1640 10 to 1198       1189/1265
(93 %)
23 diff
(98.2 %id)
BE018388 cervix .a 537 to 1028 1 to 492       492/492
(100 %)
0 diff
(100 %id)
BM794417 Ascites, stomach .a 637 to 1136 1 to 500       500/500
(100 %)
3 diff
(99.4 %id)
TI_927044352   .a 719 to 1868 1 to 1148       1148/1260
(91 %)
18 diff
(98.6 %id)
TI_2194577938   .a 720 to 1871 1 to 1145       1145/1225
(93 %)
27 diff
(97.8 %id)
DN913173   .a 721 to 1287 31 to 597       567/597
(94 %)
8 diff
(98.7 %id)
DN914503   .a 721 to 1221 8 to 508       501/508
(98 %)
11 diff
(97.9 %id)
BF797760 lymph, lymphoma, cell line .a 727 to 1501 1 to 783       781/1171
(66 %)
39 diff
(96.7 %id)
TI_2194577725   .a 728 to 1875 9 to 1156       1148/1253
(91 %)
16 diff
(98.8 %id)
TI_927044575   .a 729 to 1868 11 to 1137       1127/1203
(93 %)
30 diff
(97.6 %id)
BE536223 cervix .a 738 to 1467 1 to 745       745/831
(89 %)
46 diff
(94.5 %id)
BE206240 carcinoma cell line, cervix .a 760 to 1195 1 to 436     Submitted on the opposite strand 436/436
(100 %)
24 diff
(94.5 %id)
BC009108 Placenta, choriocarcinoma .a 785 to 3758 1 to 2975   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 2975/2975
(100 %)
7 diff
(99.8 %id)
AA312197   .a 847 to 1103 1 to 257       257/257
(100 %)
1 diff
(99.7 %id)
BE536858 cervix .a 893 to 1432 105 to 671   available from MGC,   565/1110
(50 %)
34 diff
(97.0 %id)
TI_927045652   .a 908 to 2099 1192 to 6       1187/1250
(94 %)
21 diff
(98.4 %id)
DR159406 human embryonic stem cells differentiated toan early endodermal cell type .a 955 to 1754 1 to 800       800/800
(100 %)
0 diff
(100 %id)
BQ230201 embryonal carcinoma, cell line, testis .a 966 to 1818 1 to 856       856/857
(99 %)
4 diff
(99.6 %id)
TI_2194577726   .a 979 to 2102 10 to 1130       1121/1246
(89 %)
21 diff
(98.4 %id)
TI_2194577939   .a 990 to 2096 1 to 1101       1101/1196
(92 %)
32 diff
(97.4 %id)
CN255967 embryonic stem cells, DMSO-treated H9 cellline .a 998 to 1432 1 to 436       436/436
(100 %)
6 diff
(98.7 %id)
BY995510   .a 998 to 1637 33 to 673       641/673
(95 %)
7 diff
(99.0 %id)
TI_927044353   .a 1000 to 2116 32 to 1142       1111/1262
(88 %)
20 diff
(98.5 %id)
BM781561 Ascites, stomach .a 1078 to 1702 1 to 625       625/625
(100 %)
0 diff
(100 %id)
BM781578 Ascites, stomach .a 1078 to 1723 1 to 646       646/646
(100 %)
0 diff
(100 %id)
BC004876 Lymph, Burkitt lymphoma .a 1085 to 3343 1 to 2259   available from MGC, AAA   2259/2259
(100 %)
1 diff
(100.0 %id)
BE268770 Burkitt lymphoma, lymph .a 1104 to 1730 1 to 625       625/684
(91 %)
15 diff
(97.9 %id)
BE397209 Burkitt lymphoma, lymph .a 1104 to 1809 1 to 699       700/717
(97 %)
17 diff
(97.7 %id)
TI_927046915   .a 1115 to 1819 716 to 8       709/716
(99 %)
3 diff
(99.6 %id)
CK000876 mixed .a 1144 to 1925 8 to 789       782/789
(99 %)
8 diff
(99.0 %id)
TI_927046277   .a 1185 to 1801 637 to 19       619/637
(97 %)
3 diff
(99.6 %id)
CN255969 embryonic stem cells, cell lines H1, H7, andH9 .a 1306 to 1619 13 to 326       314/326
(96 %)
7 diff
(97.9 %id)
TI_927046222   .a 1351 to 1813 478 to 15       464/518
(89 %)
5 diff
(99.1 %id)
EC460444 Prostate .a 1364 to 1462 1 to 99       99/99
(100 %)
1 diff
(99.0 %id)
TI_927044345   .a 1378 to 2598 1 to 1213       1213/1275
(95 %)
19 diff
(98.6 %id)
TI_2194577718   .a 1390 to 2605 14 to 1212       1199/1268
(94 %)
19 diff
(98.6 %id)
TI_2194577931   .a 1398 to 2485 13 to 1112       1098/1308
(83 %)
31 diff
(97.7 %id)
TI_927044568   .a 1402 to 2460 10 to 1073       1064/1314
(80 %)
26 diff
(98.1 %id)
DA727456   .a 1553 to 2192 2 to 640   capped   639/639
(100 %)
3 diff
(99.6 %id)
DB320027   .a 1611 to 2167 557 to 1       557/557
(100 %)
0 diff
(100 %id)
TI_927047666   .a 1659 to 2801 1209 to 67       1141/1215
(93 %)
21 diff
(98.3 %id)
BG942019 blood .a 1663 to 1867 1 to 205       205/205
(100 %)
0 diff
(100 %id)
AF119869 Liver .a 1674 to 3284 11 to 1621   AAA   1611/1621
(99 %)
6 diff
(99.7 %id)
AI133628 Liver .a 1674 to 2246 11 to 583       573/583
(98 %)
6 diff
(99.0 %id)
TI_2194579931   .a 1681 to 2795 1166 to 64       1103/1216
(90 %)
25 diff
(98.0 %id)
CV029690 mixed .a 1694 to 2107 1 to 415       415/416
(99 %)
13 diff
(96.9 %id)
TI_1948076172   .a 1694 to 2751 136 to 1186   fully sequenced,   1051/1186
(88 %)
28 diff
(97.7 %id)
TI_1948076353   .a 1694 to 2399 137 to 842   fully sequenced,   706/842
(83 %)
6 diff
(99.3 %id)
TI_1948076532   .a 1694 to 2399 138 to 843   fully sequenced,   706/843
(83 %)
6 diff
(99.3 %id)
TI_1948076711   .a 1694 to 2399 139 to 844   fully sequenced,   706/844
(83 %)
6 diff
(99.3 %id)
BI023355 marrow .a 1709 to 2140 434 to 2       433/434
(99 %)
3 diff
(99.4 %id)
BG777950 adenocarcinoma, Prostate .a 1719 to 1791 1 to 73       73/73
(100 %)
0 diff
(100 %id)
TI_2194576475   .a 1727 to 2795 1128 to 67       1062/1257
(84 %)
8 diff
(99.4 %id)
TI_927047884   .a 1745 to 2801 1110 to 63       1048/1231
(85 %)
17 diff
(98.7 %id)
CB143720 Liver .a 1751 to 2131 1 to 381       381/381
(100 %)
0 diff
(100 %id)
TI_927044346   .a 1752 to 2801 10 to 1055       1046/1252
(83 %)
16 diff
(98.8 %id)
TI_2194579937   .a 1753 to 2795 1102 to 67       1036/1204
(86 %)
11 diff
(99.1 %id)
CN255966 embryonic stem cells, cell lines H1, H7, andH9 .a 1756 to 2466 1 to 711       711/711
(100 %)
4 diff
(99.5 %id)
TI_2194577719   .a 1757 to 2795 12 to 1048       1037/1257
(82 %)
9 diff
(99.3 %id)
TI_927044569   .a 1764 to 2795 8 to 1044       1037/1239
(83 %)
14 diff
(98.9 %id)
TI_927047878   .a 1766 to 2801 1088 to 59       1030/1213
(84 %)
15 diff
(98.8 %id)
TI_2194577932   .a 1769 to 2795 12 to 1040       1029/1193
(86 %)
22 diff
(98.2 %id)
BI086715 cervix .a 1862 to 2626 1 to 765       765/765
(100 %)
7 diff
(99.1 %id)
TI_2194577933   .a 1870 to 2795 1 to 925       923/1041
(88 %)
7 diff
(99.4 %id)
TI_2194577720   .a 1876 to 2795 8 to 927       920/1236
(74 %)
7 diff
(99.5 %id)
TI_927044347   .a 1877 to 2801 10 to 934       925/1244
(74 %)
12 diff
(99.1 %id)
TI_927044570   .a 1877 to 2792 8 to 922       915/1277
(71 %)
9 diff
(99.3 %id)
AI078425 liver and spleen .a 1964 to 2412 449 to 1       449/449
(100 %)
0 diff
(100 %id)
AI636632 pooled germ cell tumors .a 1990 to 2413 424 to 1       424/424
(100 %)
0 diff
(100 %id)
AA305452 colon .a 1991 to 2480 1 to 487       487/487
(100 %)
11 diff
(97.8 %id)
DW413947 Liver .a 1999 to 2300 17 to 318       302/318
(94 %)
7 diff
(97.8 %id)
AI962581 pooled germ cell tumors .a 2036 to 2423 390 to 3   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 388/390
(99 %)
1 diff
(99.8 %id)
DA728139   .a 2083 to 2962 2 to 876   capped   875/876
(99 %)
12 diff
(98.7 %id)
TI_2194577721   .a 2198 to 2795 8 to 603       596/1288
(46 %)
3 diff
(99.8 %id)
TI_927044348   .a 2200 to 2801 12 to 613       602/1258
(47 %)
11 diff
(99.2 %id)
TI_927044571   .a 2205 to 2801 17 to 612       596/1243
(47 %)
11 diff
(99.2 %id)
CU449263 epidermis .a 2228 to 2725 9 to 506       498/525
(94 %)
7 diff
(98.7 %id)
TI_1948076354   .a 2338 to 2757 541 to 122   fully sequenced,   420/541
(77 %)
0 diff
(100 %id)
TI_1948076533   .a 2338 to 2757 542 to 123   fully sequenced,   420/542
(77 %)
0 diff
(100 %id)
TI_1948076712   .a 2338 to 2757 540 to 121   fully sequenced,   420/540
(77 %)
0 diff
(100 %id)
EL593356 epidermis, skin .a 2370 to 2725 383 to 26     Submitted on the opposite strand 358/400
(89 %)
3 diff
(99.3 %id)
BM465842 eye, retinoblastoma .a 2407 to 3295 11 to 906   AAA   896/975
(91 %)
22 diff
(97.8 %id)
AA091854   .a 2439 to 2760 1 to 308       308/310
(99 %)
22 diff
(93.0 %id)
BQ432059 melanotic melanoma, skin .a 2446 to 3224 48 to 835       788/903
(87 %)
21 diff
(97.7 %id)
TI_1948076173   .a 2452 to 2757 428 to 123   fully sequenced,   306/428
(71 %)
0 diff
(100 %id)
CR620605 B cells (Ramos cell line) Cot 25-normalized .a 2459 to 3290 1 to 832       832/832
(100 %)
0 diff
(100 %id)
BX346400   .a 2459 to 3290 1 to 831       831/831
(100 %)
11 diff
(98.7 %id)
BE890219 leiomyosarcoma, uterus .a 2468 to 2964 1 to 494       494/498
(99 %)
9 diff
(98.2 %id)
BU542039 carcinoma, cell line, Prostate .a 2470 to 3246 27 to 807       781/940
(83 %)
9 diff
(99.1 %id)
BU542210 carcinoma, cell line, Prostate .a 2471 to 3285 1 to 815   AAA   815/815
(100 %)
2 diff
(99.8 %id)
BQ929138 carcinoma, cell line, Prostate .a 2482 to 3284 12 to 815   AAA   804/815
(98 %)
9 diff
(98.9 %id)
BM755471 stomach .a 2562 to 3097 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
T97047 liver and spleen .a 2626 to 3035 8 to 431       424/432
(98 %)
28 diff
(93.6 %id)
BU618352 Cell Line, Chondrosarcoma .a 2677 to 3343 685 to 19   AAA   667/667
(100 %)
2 diff
(99.8 %id)
BU615340 Bone, Human Chondrosarcoma Cell Line .a 2678 to 3286 625 to 19   AAA   607/607
(100 %)
3 diff
(99.6 %id)
BF664754 brain, primitive neuroectoderm .a 2740 to 3413 1 to 676       676/677
(99 %)
13 diff
(98.1 %id)
BE302000 cervix .a 2752 to 3284 534 to 1       534/534
(100 %)
8 diff
(98.6 %id)
DA609524   .a 2755 to 3280 2 to 529   capped   528/529
(99 %)
5 diff
(99.1 %id)
BG057301 blood, lymphocyte .a 2868 to 3286 421 to 3       419/421
(99 %)
0 diff
(100 %id)
AA583783 larynx .a 2896 to 3343 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AA352852   .a 2937 to 3227 10 to 300       291/300
(97 %)
6 diff
(98.0 %id)
BM852335 Ascites, stomach .a 2998 to 3490 1 to 493       493/493
(100 %)
0 diff
(100 %id)
AI750443 Bone, Hip .a 3013 to 3326 320 to 8       313/320
(97 %)
0 diff
(100 %id)
BP432137   .a 3051 to 3445 1 to 396       396/396
(100 %)
6 diff
(98.5 %id)
BE748318 bone marrow, from acute myelogenous leukemia .a 3224 to 3632 300 to 726       686/741
(92 %)
31 diff
(95.9 %id)
AW081092 colon, moderately differentiated adenocarcinoma .a 3319 to 3758 464 to 24   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 441/441
(100 %)
4 diff
(99.1 %id)
T96938 liver and spleen .a 3369 to 3752 390 to 1       390/392
(99 %)
9 diff
(97.8 %id)
NM_018518.4   .b 1 to 4537 2 to 4538 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/18 A in genome downstream of last aligned base) 4538/4538
(100 %)
0 diff
(100 %id)
CN255972 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 25 to 805 1 to 781   tiling clone,   781/781
(100 %)
1 diff
(99.9 %id)
DA022504   .b 26 to 589 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA052526   .b 26 to 597 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA644085   .b 26 to 585 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BX324498 Neuroblastoma Cot 25-normalized .b 27 to 963 1 to 936       936/936
(100 %)
8 diff
(99.2 %id)
BP246686 Kidney .b 31 to 613 1 to 583       583/587
(99 %)
1 diff
(99.9 %id)
BP359743 mammary gland .b 31 to 613 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
AB042719   .b 33 to 3753 1 to 3721 exact tiling clone,   3721/3721
(100 %)
0 diff
(100 %id)
BP244816 Kidney .b 34 to 635 1 to 603       603/603
(100 %)
1 diff
(99.9 %id)
BC143490 Liver, PCR rescued clones .b 35 to 2790 1 to 2756 exact     2756/2756
(100 %)
0 diff
(100 %id)
TI_2194576094   .b 35 to 1183 46 to 1185       1140/1252
(91 %)
26 diff
(98.0 %id)
TI_2194579919   .b 35 to 1061 47 to 1069       1023/1210
(84 %)
13 diff
(99.0 %id)
TI_2194579925   .b 35 to 1219 46 to 1224       1179/1239
(95 %)
34 diff
(97.3 %id)
BP315449 mammary gland .b 35 to 610 1 to 576       576/582
(98 %)
3 diff
(99.5 %id)
DN999751   .b 39 to 676 4 to 641       638/641
(99 %)
6 diff
(99.1 %id)
CN255965 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 59 to 817 1 to 759       759/759
(100 %)
2 diff
(99.8 %id)
CN255971 embryonic stem cells, cell lines H1, H7, andH9 .b 74 to 740 1 to 667       667/667
(100 %)
0 diff
(100 %id)
CN255970 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 80 to 786 1 to 707       707/707
(100 %)
0 diff
(100 %id)
CX872794 embryonic stem .b 413 to 1154 18 to 757       740/757
(97 %)
7 diff
(99.1 %id)
AI005288 pooled .b 429 to 912 482 to 1       482/482
(100 %)
1 diff
(99.8 %id)
TI_2194577724   .b 437 to 1543 6 to 1107       1102/1262
(87 %)
13 diff
(99.0 %id)
CB120985 Liver .b 469 to 884 1 to 416       416/416
(100 %)
4 diff
(99.1 %id)
AI750442 Bone, Hip .b 487 to 809 48 to 368       321/368
(87 %)
8 diff
(97.9 %id)
BX324497 Neuroblastoma Cot 25-normalized .b 2335 to 3327 993 to 1       993/993
(100 %)
7 diff
(99.3 %id)
AL136840 testis .c 1 to 4594 4 to 4598 A194P T540S tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 4598/4598
(100 %)
5 diff
(99.9 %id)
BF214594 bone marrow, from acute myelogenous leukemia .c 3394 to 3827 1 to 431       431/876
(49 %)
16 diff
(98.2 %id)
T99128 liver and spleen .c 3457 to 3750 1 to 306       306/308
(99 %)
16 diff
(94.9 %id)
H70527 liver and spleen .c 3457 to 3810 1 to 356       356/361
(98 %)
5 diff
(98.7 %id)
AI695143 colon .c 3514 to 3813 300 to 1       300/300
(100 %)
0 diff
(100 %id)
BM806348 leiomyosarcoma, uterus .c 3542 to 3803 272 to 12     Submitted on the opposite strand 261/290
(90 %)
0 diff
(100 %id)
FN107256 breast carcinoma .c 3876 to 3980 106 to 1     Submitted on the opposite strand 106/109
(97 %)
2 diff
(98.2 %id)
BG496053 lung, mucoepidermoid carcinoma .c 4010 to 4584 1 to 579   AAA   579/615
(94 %)
18 diff
(97.1 %id)
BG687315 lung, mucoepidermoid carcinoma .c 4010 to 4609 1 to 596       596/630
(94 %)
8 diff
(98.8 %id)
CA338015 1st pharyngeal arch (pooled) .c 4338 to 4608 1 to 271       271/319
(84 %)
1 diff
(99.7 %id)
BM454580 embryonal carcinoma, cell line, testis .c 4460 to 4603 15 to 158       144/171
(84 %)
1 diff
(99.5 %id)
BE561621 Burkitt lymphoma, lymph .d 1 to 805 1 to 799 L6T V7R A8P H9G X11* tiling clone, available from MGC,   803/970
(82 %)
29 diff
(97.1 %id)
CA488245   .e 1 to 877 1 to 887 K71R G217X P241S A242C tiling clone,   887/916
(96 %)
14 diff
(98.5 %id)
BX099770 germinal center B cell .f 1 to 467 1 to 467 exact tiling clone,   467/467
(100 %)
0 diff
(100 %id)
CN255964 embryonic stem cells, cell lines H1, H7, andH9 .g 1 to 618 1 to 618 exact tiling clone,   618/618
(100 %)
1 diff
(99.9 %id)
DB146460 thymus .h 1 to 468 2 to 469 Q43X tiling clone, capped   468/468
(100 %)
0 diff
(100 %id)
DN913174   Gene MCM10, variant not shown         Suspected internal deletion, this clone was ignored    
H69558 liver and spleen Gene MCM10, variant not shown         Suspected internal deletion, this clone was ignored    
H70014 liver and spleen Gene MCM10, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI