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Gene MAT1ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
136 supporting clones for gene MAT1A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA703325 liver and spleen .a 1 to 441 436 to 1   tiling clone,   436/439
(99 %)
5 diff
(98.9 %id)
AA678398 liver and spleen .a 25 to 441 413 to 1   tiling clone,   413/413
(100 %)
4 diff
(99.1 %id)
BJ993365 hepatoblastoma .a 427 to 877 1 to 457   tiling clone,   457/457
(100 %)
4 diff
(99.2 %id)
BJ993366 hepatoblastoma .a 1994 to 2440 447 to 1   tiling clone,   447/447
(100 %)
0 diff
(100 %id)
DB063992 testis .b 1 to 550 2 to 558   tiling clone, capped   557/557
(100 %)
5 diff
(99.2 %id)
AL557936 T cells from T cell leukemia .b 298 to 1283 1 to 986   tiling clone,   986/989
(99 %)
20 diff
(98.0 %id)
AL579877 T cells from T cell leukemia .b 1287 to 2264 980 to 5   tiling clone,   854/980
(87 %)
17 diff
(98.3 %id)
BX365507   .c 1 to 823 1 to 828   tiling clone,   828/828
(100 %)
5 diff
(99.4 %id)
BM738684 stomach .c 125 to 731 1 to 613       613/613
(100 %)
5 diff
(99.2 %id)
NM_000429.2   .c 131 to 3533 1 to 3403 exact RefSeq, AAA   3403/3403
(100 %)
0 diff
(100 %id)
BX495853 Liver .c 149 to 301 1 to 153       153/162
(94 %)
5 diff
(97.0 %id)
BX495857 Liver .c 149 to 657 1 to 512       512/512
(100 %)
5 diff
(99.1 %id)
BX496548 Liver .c 150 to 789 1 to 643       643/643
(100 %)
3 diff
(99.6 %id)
BX495906 Liver .c 150 to 850 1 to 708       708/708
(100 %)
7 diff
(99.1 %id)
BX496320 Liver .c 150 to 672 1 to 528       528/528
(100 %)
6 diff
(98.9 %id)
BX496326 Liver .c 150 to 693 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
BX496374 Liver .c 150 to 655 1 to 512       512/512
(100 %)
4 diff
(99.3 %id)
DA035010 breast .c 151 to 728 2 to 584   capped   583/583
(100 %)
4 diff
(99.4 %id)
DA036942 breast .c 152 to 723 2 to 579   capped   578/578
(100 %)
5 diff
(99.2 %id)
DB084382 testis .c 152 to 701 2 to 557   capped   556/556
(100 %)
4 diff
(99.3 %id)
DA636962 Liver .c 154 to 825 2 to 679   capped   678/678
(100 %)
7 diff
(99.0 %id)
DA637103 Liver .c 154 to 641 2 to 495   capped   494/494
(100 %)
5 diff
(99.0 %id)
DA640635 Liver .c 154 to 702 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DB188493 liver, tumor tissue .c 155 to 700 2 to 553   capped   552/552
(100 %)
4 diff
(99.3 %id)
DA641830 Liver .c 157 to 825 2 to 676   capped   675/675
(100 %)
5 diff
(99.3 %id)
DB183687 liver, tumor tissue .c 157 to 724 2 to 575   capped   574/575
(99 %)
6 diff
(99.0 %id)
BX422457 fetal liver, Liver .c 163 to 1017 1 to 859       859/885
(97 %)
25 diff
(97.2 %id)
BX448301 fetal liver, Liver .c 163 to 1150 1 to 983       983/983
(100 %)
24 diff
(97.6 %id)
T69355 Liver .c 169 to 309 1 to 140       140/140
(100 %)
2 diff
(98.6 %id)
BF796277 lymph, lymphoma, cell line .c 169 to 902 1 to 735       735/739
(99 %)
18 diff
(97.6 %id)
BC018359 Lymph, lymphoma .c 170 to 3533 1 to 3370 exact available from MGC, AAA   3370/3370
(100 %)
10 diff
(99.8 %id)
BF796302 lymph, lymphoma, cell line .c 170 to 791 1 to 633       633/1038
(60 %)
8 diff
(99.3 %id)
DB186032 liver, tumor tissue .c 192 to 756 2 to 574   capped   573/573
(100 %)
6 diff
(99.0 %id)
BX496258 Liver .c 233 to 632 1 to 406       406/406
(100 %)
6 diff
(98.6 %id)
DB140791 thymus .c 241 to 758 2 to 519   tiling clone, capped   518/518
(100 %)
0 diff
(100 %id)
DB187545 liver, tumor tissue .c 241 to 804 2 to 572   capped   571/571
(100 %)
5 diff
(99.2 %id)
BI836692 pooled pancreas and spleen .c 260 to 975 1 to 723       723/723
(100 %)
6 diff
(99.2 %id)
TI_57167644   .c 260 to 975 31 to 753       723/753
(96 %)
8 diff
(99.0 %id)
BX497382 Liver .c 268 to 791 1 to 527       527/532
(99 %)
5 diff
(99.1 %id)
DA637069 Liver .c 273 to 799 2 to 535   capped   534/534
(100 %)
4 diff
(99.3 %id)
DB186802 liver, tumor tissue .c 273 to 832 2 to 567   capped   566/567
(99 %)
6 diff
(99.0 %id)
X69078 Liver .c 315 to 3533 1 to 3217 exact tiling clone, AAA   3217/3217
(100 %)
7 diff
(99.8 %id)
CV569229 cornea, eye .c 321 to 803 9 to 491       483/483
(100 %)
0 diff
(100 %id)
DR003855 Liver .c 339 to 1053 17 to 731       715/731
(97 %)
7 diff
(99.1 %id)
CB115401 Liver .c 346 to 858 1 to 512       512/512
(100 %)
3 diff
(99.5 %id)
D49357 Liver .c 368 to 1854 1 to 1487 G272A G273A     1487/1487
(100 %)
8 diff
(99.5 %id)
CV023844 mixed .c 386 to 1005 1 to 620       620/620
(100 %)
1 diff
(99.9 %id)
BX496046 Liver .c 676 to 1302 1 to 627       627/627
(100 %)
7 diff
(98.9 %id)
BU188637 melanotic melanoma, skin .c 690 to 1458 1 to 773       773/836
(92 %)
7 diff
(99.2 %id)
DA637767 Liver .c 1170 to 1715 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DB183152 liver, tumor tissue .c 1522 to 2079 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BM905307 melanotic melanoma, skin .c 1677 to 2606 1 to 948       948/1053
(90 %)
24 diff
(97.8 %id)
R10853 liver and spleen .c 1688 to 2050 1 to 379       379/430
(88 %)
26 diff
(94.0 %id)
CD608529   .c 1732 to 2085 1 to 353       353/357
(98 %)
3 diff
(99.2 %id)
CD608527   .c 1748 to 2085 1 to 337       337/341
(98 %)
5 diff
(98.6 %id)
AA451788.
matches multiple genes
  .c 1874 to 2366 1 to 491     also hits gene spoyspee 491/491
(100 %)
2 diff
(99.6 %id)
AA451787   .c 1885 to 2219 47 to 380       334/380
(87 %)
6 diff
(98.5 %id)
H47171 liver and spleen .c 1896 to 2286 1 to 398       398/398
(100 %)
7 diff
(98.3 %id)
CR600407 fetal liver .c 1998 to 3504 1 to 1507   tiling clone,   1507/1507
(100 %)
0 diff
(100 %id)
BX448255 fetal liver, Liver .c 1998 to 2975 1 to 977   fully sequenced,   977/977
(100 %)
4 diff
(99.6 %id)
T73550 Liver .c 2062 to 2394 1 to 340       340/351
(96 %)
8 diff
(97.8 %id)
W23542 liver and spleen .c 2073 to 2514 1 to 445       445/445
(100 %)
4 diff
(99.2 %id)
BQ644439 hepatocellular carcinoma, cell line, Liver .c 2105 to 2682 1 to 585       585/1206
(48 %)
24 diff
(98.1 %id)
H71432 liver and spleen .c 2169 to 2657 1 to 493       493/502
(98 %)
21 diff
(95.9 %id)
N73161 liver and spleen .c 2191 to 2722 1 to 539       539/539
(100 %)
13 diff
(97.6 %id)
N99511 liver and spleen .c 2235 to 2686 1 to 452       452/452
(100 %)
2 diff
(99.6 %id)
R96684 liver and spleen .c 2239 to 2623 1 to 389       389/469
(82 %)
8 diff
(98.3 %id)
AA001252 liver and spleen .c 2240 to 2846 1 to 606       606/607
(99 %)
5 diff
(99.2 %id)
N50000 liver and spleen .c 2245 to 2742 1 to 499       499/501
(99 %)
5 diff
(99.1 %id)
N77390 multiple sclerosis lesions .c 2291 to 2784 1 to 492       492/492
(100 %)
5 diff
(99.0 %id)
CD608526   .c 2301 to 2800 503 to 8       496/503
(98 %)
0 diff
(100 %id)
CD608528   .c 2301 to 2800 504 to 8       497/504
(98 %)
0 diff
(100 %id)
R93441 liver and spleen .c 2328 to 2694 1 to 369       369/424
(87 %)
5 diff
(98.9 %id)
R93454 liver and spleen .c 2328 to 2785 1 to 459       459/462
(99 %)
7 diff
(98.5 %id)
W00808 liver and spleen .c 2347 to 2788 1 to 442       442/442
(100 %)
3 diff
(99.4 %id)
R01407 liver and spleen .c 2355 to 2736 1 to 388       388/390
(99 %)
13 diff
(96.7 %id)
W88504 liver and spleen .c 2355 to 2786 1 to 436       436/436
(100 %)
6 diff
(98.7 %id)
BG617167 Liver .c 2379 to 3103 1 to 724       724/724
(100 %)
6 diff
(99.2 %id)
H64789 liver and spleen .c 2386 to 2772 40 to 422       383/422
(90 %)
6 diff
(98.6 %id)
BU165924 melanotic melanoma, skin .c 2400 to 3288 1 to 899       899/899
(100 %)
23 diff
(97.5 %id)
T67968 Liver .c 2423 to 2786 1 to 378       378/379
(99 %)
17 diff
(95.6 %id)
BX448300 fetal liver, Liver .c 2456 to 3521 1074 to 1       1074/1118
(96 %)
21 diff
(98.2 %id)
AA001248 liver and spleen .c 2477 to 3071 1 to 598       598/599
(99 %)
16 diff
(97.4 %id)
BX507407 Liver .c 2482 to 3077 1 to 597       597/597
(100 %)
2 diff
(99.7 %id)
T85947 liver and spleen .c 2510 to 2894 1 to 396       396/403
(98 %)
17 diff
(95.8 %id)
H78095 liver and spleen .c 2511 to 2858 1 to 349       349/349
(100 %)
1 diff
(99.8 %id)
H51051 liver and spleen .c 2522 to 2982 1 to 460       460/461
(99 %)
8 diff
(98.3 %id)
N76813 liver and spleen .c 2550 to 2984 1 to 436       436/436
(100 %)
2 diff
(99.6 %id)
BG031941 breast, mammary adenocarcinoma, cell line .c 2587 to 3361 1 to 773       773/1071
(72 %)
24 diff
(97.8 %id)
BX365506   .c 2635 to 3506 882 to 1       882/882
(100 %)
9 diff
(99.0 %id)
W04417 liver and spleen .c 2643 to 2888 1 to 245       245/245
(100 %)
2 diff
(99.2 %id)
TI_159723957   .c 2741 to 3533 861 to 80   AAA   782/976
(80 %)
15 diff
(98.5 %id)
AV653407 corresponding non cancerous liver tissue .c 2821 to 3258 1 to 449     Submitted on the opposite strand 449/451
(99 %)
26 diff
(94.3 %id)
BX119626 liver and spleen .c 2834 to 3438 1 to 615       615/615
(100 %)
8 diff
(98.7 %id)
W02357 liver and spleen .c 2834 to 3120 1 to 301   fully sequenced,   301/301
(100 %)
11 diff
(96.4 %id)
AV659089 corresponding non cancerous liver tissue .c 2840 to 3240 1 to 411     Submitted on the opposite strand 411/413
(99 %)
15 diff
(96.4 %id)
H62314 liver and spleen .c 2869 to 3175 1 to 308   fully sequenced,   308/308
(100 %)
12 diff
(96.2 %id)
CA944644 Human Lung Epithelial cells, lung .c 2925 to 3533 627 to 19   AAA   609/609
(100 %)
2 diff
(99.7 %id)
BX448254 fetal liver, Liver .c 2945 to 3504 561 to 1   fully sequenced,   561/561
(100 %)
56 diff
(90.1 %id)
AA704805 liver and spleen .c 2992 to 3529 548 to 1       548/548
(100 %)
10 diff
(98.2 %id)
W73761 heart .c 3017 to 3527 1 to 520   fully sequenced,   520/520
(100 %)
9 diff
(98.3 %id)
AA682837 liver and spleen .c 3049 to 3529 490 to 1       490/490
(100 %)
10 diff
(98.0 %id)
AA699812 liver and spleen .c 3049 to 3529 492 to 1       492/492
(100 %)
55 diff
(88.9 %id)
N49897 liver and spleen .c 3065 to 3533 481 to 1       481/481
(100 %)
10 diff
(98.0 %id)
DB321139 Liver .c 3074 to 3533 461 to 1       461/533
(86 %)
7 diff
(98.7 %id)
BF001548 colon, colon tumor, RER+ .c 3082 to 3531 452 to 3       450/453
(99 %)
0 diff
(100 %id)
AI808037 pooled .c 3083 to 3534 466 to 5       462/466
(99 %)
0 diff
(100 %id)
N72709 liver and spleen .c 3090 to 3533 456 to 1   fully sequenced,   456/456
(100 %)
10 diff
(97.9 %id)
N55440 liver and spleen .c 3110 to 3533 433 to 1       433/435
(99 %)
7 diff
(98.4 %id)
AI144381 heart .c 3114 to 3531 428 to 1       428/428
(100 %)
7 diff
(98.4 %id)
AA002206 liver and spleen .c 3115 to 3534 431 to 1       431/431
(100 %)
8 diff
(98.2 %id)
AA002202 liver and spleen .c 3118 to 3524 418 to 1       418/419
(99 %)
8 diff
(98.1 %id)
N71481 liver and spleen .c 3123 to 3533 434 to 1       434/434
(100 %)
12 diff
(97.3 %id)
N69999 liver and spleen .c 3124 to 3534 427 to 6       422/427
(98 %)
0 diff
(100 %id)
AI040981   .c 3149 to 3534 388 to 3   tiling clone,   386/388
(99 %)
0 diff
(100 %id)
T28566 Spleen .c 3158 to 3533 376 to 1       376/376
(100 %)
0 diff
(100 %id)
T73481 Liver .c 3168 to 3525 375 to 8       368/490
(75 %)
0 diff
(100 %id)
T67817 Liver .c 3168 to 3518 368 to 18       351/383
(91 %)
0 diff
(100 %id)
H51052 liver and spleen .c 3168 to 3533 375 to 10       366/441
(82 %)
0 diff
(100 %id)
R93396 liver and spleen .c 3168 to 3502 338 to 1       338/408
(82 %)
3 diff
(99.3 %id)
R96637 liver and spleen .c 3168 to 3499 333 to 1       333/374
(89 %)
1 diff
(99.8 %id)
N72701 liver and spleen .c 3168 to 3533 367 to 1       367/384
(95 %)
3 diff
(99.3 %id)
AI018328 pooled .c 3168 to 3534 371 to 5       367/394
(93 %)
0 diff
(100 %id)
AI242113 pooled .c 3168 to 3534 369 to 3       367/398
(92 %)
0 diff
(100 %id)
H62218 liver and spleen .c 3169 to 3534 373 to 3   fully sequenced,   371/373
(99 %)
0 diff
(100 %id)
H78096 liver and spleen .c 3176 to 3534 370 to 3       368/444
(82 %)
0 diff
(100 %id)
H71433 liver and spleen .c 3188 to 3518 335 to 1       335/340
(98 %)
7 diff
(98.0 %id)
AI184830 heart .c 3189 to 3530 342 to 1       342/342
(100 %)
0 diff
(100 %id)
AV697325 hepatocellular carcinoma .c 3199 to 3533 1 to 335   AAA   335/335
(100 %)
9 diff
(97.4 %id)
AA453988   .c 3224 to 3534 316 to 6       311/316
(98 %)
0 diff
(100 %id)
T73575 Liver .c 3247 to 3533 295 to 3       293/295
(99 %)
0 diff
(100 %id)
AW450708   .c 3258 to 3533 293 to 18   AAA   276/286
(96 %)
2 diff
(99.4 %id)
AI201376   .c 3264 to 3534 275 to 4       272/275
(98 %)
0 diff
(100 %id)
AV682077 hepatocellular carcinoma .c 3266 to 3533 1 to 268   AAA   268/268
(100 %)
2 diff
(99.3 %id)
N52430 liver and spleen .c 3372 to 3534 170 to 8       163/187
(87 %)
0 diff
(100 %id)
N75999 liver and spleen .c 3396 to 3533 148 to 11   AAA   138/139
(99 %)
2 diff
(98.6 %id)
W73594 heart .c 3424 to 3533 112 to 1   fully sequenced,   112/112
(100 %)
0 diff
(100 %id)
C21287   .c 3442 to 3533 1 to 92       92/92
(100 %)
0 diff
(100 %id)
H40262 liver and spleen .c 3449 to 3528 81 to 2       80/81
(98 %)
0 diff
(100 %id)
BX444210 fetal liver, Liver .d-u 1 to 960 1 to 955   tiling clone,   955/1038
(92 %)
29 diff
(97.3 %id)
BX410177 fetal liver, Liver .d-u 770 to 1694 1 to 919 G139V P158S G160X N165K W166L ... tiling clone,   919/919
(100 %)
19 diff
(98.0 %id)
BQ352481 head_neck .e 1 to 438 1 to 438   tiling clone,   438/438
(100 %)
3 diff
(99.4 %id)
DB183498 liver, tumor tissue .e 59 to 601 2 to 545   tiling clone, capped   544/544
(100 %)
2 diff
(99.7 %id)
AK026931   .f 1 to 2656 1 to 2656 exact tiling clone, available from FLJ, AAA   2656/2656
(100 %)
5 diff
(99.9 %id)
DB053541 testis .f 77 to 639 2 to 564   capped   563/563
(100 %)
3 diff
(99.5 %id)
TI_57174819   .f 108 to 642 32 to 571       540/763
(70 %)
11 diff
(98.6 %id)
BI827281 brain, medulla .f 109 to 642 1 to 539       539/731
(73 %)
8 diff
(99.0 %id)
TI_57170514   .g 1 to 753 34 to 793 D10M A11R G12V V13S T14L ... tiling clone,   760/918
(82 %)
26 diff
(97.2 %id)
BI825456 brain, medulla .g 2 to 753 1 to 759 D10M A11R G12V V13S T14L ... tiling clone,   759/884
(85 %)
20 diff
(97.8 %id)
AV686333 hepatocellular carcinoma .h 1 to 407 1 to 402 exact tiling clone,   402/403
(99 %)
3 diff
(99.3 %id)
AK290820 Liver Gene MAT1A, variant not shown         Suspected internal deletion, this clone was ignored    
BX646738 Liver Gene MAT1A, variant not shown         This clone was ignored    
BX646739 Liver Gene MAT1A, variant not shown       AAA This clone was ignored    
AV689522 hepatocellular carcinoma Gene MAT1A, variant not shown         Suspected internal deletion, this clone was ignored    
AV692680 hepatocellular carcinoma Gene MAT1A, variant not shown         Suspected internal deletion, this clone was ignored    
AV657120 corresponding non cancerous liver tissue Gene MAT1A, variant not shown       AAA Submitted on the opposite strand, submitted on the opposite strand    
BJ993164 hepatoblastoma Gene MAT1A, variant not shown         Suspected internal deletion, this clone was ignored    
BJ993502 hepatoblastoma Gene MAT1A, variant not shown         Suspected internal deletion, this clone was ignored    
BJ993503 hepatoblastoma Gene MAT1A, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1948126073   Gene MAT1A, variant not shown       fully sequenced, This clone was ignored    
TI_1948126074   Gene MAT1A, variant not shown       fully sequenced, This clone was ignored    
TI_1948126225   Gene MAT1A, variant not shown       fully sequenced, This clone was ignored    
TI_1948126226   Gene MAT1A, variant not shown       fully sequenced, This clone was ignored    
TI_1948126381   Gene MAT1A, variant not shown       fully sequenced, This clone was ignored    
TI_1948126382   Gene MAT1A, variant not shown       fully sequenced, This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f, .g, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC