To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene MAST1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
122 supporting clones for gene MAST1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_014975.2   .a 1 to 4921 2 to 4922 exact RefSeq, AAA   4922/4922
(100 %)
0 diff
(100 %id)
DA769770 brain .a 1 to 237 2 to 238   tiling clone, capped   237/237
(100 %)
0 diff
(100 %id)
BX385790.
matches multiple genes
Placenta Cot 25-normalized .a 28 to 827 1 to 799     also hits gene GPR180 801/799
(100 %)
17 diff
(97.9 %id)
BX362136   .a 28 to 902 1 to 874       876/874
(100 %)
8 diff
(99.1 %id)
AL523869 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 46 to 1073 1 to 1012       1017/1024
(99 %)
31 diff
(97.0 %id)
AB023190 brain .a 89 to 4921 1 to 4833 exact tiling clone, available from KIAA,   4833/4833
(100 %)
3 diff
(100.0 %id)
DA518567 brain .a 97 to 632 2 to 537   capped   536/536
(100 %)
5 diff
(99.1 %id)
DA521063 brain .a 97 to 664 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BM754236 Ascites, stomach .a 109 to 405 1 to 303       300/303
(99 %)
21 diff
(93.1 %id)
BQ189590 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 257 to 668 1 to 414       414/414
(100 %)
11 diff
(97.4 %id)
BE260905 brain, neuroblastoma .a 288 to 1034 1 to 752   available from MGC,   750/1185
(63 %)
11 diff
(99.1 %id)
BF307291 muscle, rhabdomyosarcoma .a 398 to 1143 1 to 744   tiling clone,   744/744
(100 %)
14 diff
(98.2 %id)
BE255562 eye, retinoblastoma .a 669 to 1247 1 to 579   tiling clone,   579/580
(99 %)
3 diff
(99.5 %id)
BG914241 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1289 to 1950 35 to 696   available from MGC,   660/696
(94 %)
9 diff
(98.8 %id)
BC027985 Brain, anaplastic oligodendroglioma with1p/19q loss .a 1293 to 4917 12 to 3636   available from MGC, AAA   3625/3625
(100 %)
0 diff
(100 %id)
BQ345270 nervous_tumor .a 1335 to 1815 483 to 4       480/483
(99 %)
0 diff
(100 %id)
BQ340739 nervous_normal .a 1377 to 1595 1 to 218       216/218
(99 %)
7 diff
(96.8 %id)
TI_57242429   .a 1595 to 2374 43 to 820       778/820
(94 %)
10 diff
(98.8 %id)
BI917139 brain .a 1606 to 2374 1 to 767       767/767
(100 %)
2 diff
(99.8 %id)
TI_1948149455   .a 1648 to 2674 134 to 1151       1018/1332
(76 %)
42 diff
(96.9 %id)
TI_1948149456   .a 1648 to 2452 128 to 934       807/1406
(57 %)
48 diff
(96.6 %id)
TI_1948149750   .a 1648 to 2438 134 to 920       787/1370
(57 %)
24 diff
(98.3 %id)
TI_1948149751   .a 1648 to 2267 126 to 748       623/1468
(42 %)
18 diff
(98.8 %id)
TI_1948150039   .a 1648 to 2693 133 to 1172       1040/1354
(76 %)
48 diff
(96.5 %id)
TI_1948150040   .a 1648 to 2269 128 to 754       627/1414
(44 %)
33 diff
(97.7 %id)
TI_1948150335   .a 1648 to 2692 131 to 1171       1041/1337
(77 %)
35 diff
(97.4 %id)
TI_1948150336   .a 1648 to 2269 130 to 751       622/1485
(41 %)
9 diff
(99.4 %id)
CV030423 mixed .a 1649 to 2285 1 to 637       637/637
(100 %)
2 diff
(99.7 %id)
TI_1948150637   .a 1650 to 2213 123 to 688       566/1460
(38 %)
40 diff
(97.3 %id)
CN364484 embryonic stem cells, cell lines H1, H7, andH9 .a 1675 to 2017 1 to 341       341/341
(100 %)
2 diff
(99.5 %id)
BE260434 brain, neuroblastoma .a 1765 to 2512 1 to 740       740/770
(96 %)
11 diff
(98.6 %id)
BQ638586 eye, retina .a 2488 to 3102 1 to 615       615/615
(100 %)
0 diff
(100 %id)
CN364483 embryonic stem cells, cell lines H1, H7, andH9 .a 2708 to 3413 1 to 706       706/706
(100 %)
6 diff
(99.2 %id)
DA532104 brain .a 2711 to 3313 2 to 604   capped   603/603
(100 %)
1 diff
(99.9 %id)
TI_57220529   .a 2772 to 3685 29 to 931       903/939
(96 %)
26 diff
(97.3 %id)
BI757317 brain .a 2773 to 3685 1 to 902       902/910
(99 %)
18 diff
(98.1 %id)
AA047838 eye, retina .a 2855 to 3312 1 to 461       461/473
(97 %)
10 diff
(97.9 %id)
CA398146 eye, RPE/choroid .a 2878 to 3424 1 to 547       547/547
(100 %)
0 diff
(100 %id)
R84814 eye, retina .a 2901 to 3253 1 to 360       360/379
(94 %)
12 diff
(96.9 %id)
AA193616 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2945 to 3517 1 to 575       573/575
(99 %)
25 diff
(95.7 %id)
BM726659 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2945 to 3375 1 to 431       431/431
(100 %)
0 diff
(100 %id)
BX420067 brain, fetal brain .a 2988 to 4109 1 to 1107       1107/1136
(97 %)
27 diff
(97.7 %id)
AW904991 nervous_normal .a 3003 to 3453 1 to 451       451/451
(100 %)
4 diff
(99.2 %id)
AW904998 nervous_normal .a 3003 to 3480 1 to 478       478/478
(100 %)
3 diff
(99.4 %id)
AW905005 nervous_normal .a 3003 to 3494 1 to 492       492/492
(100 %)
3 diff
(99.4 %id)
AW905007 nervous_normal .a 3003 to 3571 1 to 569       569/569
(100 %)
7 diff
(98.8 %id)
AW905009 nervous_normal .a 3003 to 3452 1 to 450       450/450
(100 %)
3 diff
(99.4 %id)
BQ929571 leiomyosarcoma, uterus .a 3043 to 3933 1 to 898       898/903
(99 %)
16 diff
(98.3 %id)
H14890 whole brain .a 3057 to 3377 1 to 325       325/325
(100 %)
7 diff
(97.9 %id)
DA088708 cerebellum .a 3103 to 3643 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA072016 cerebellum .a 3125 to 3694 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA085413 cerebellum .a 3125 to 3687 2 to 564   capped   563/563
(100 %)
5 diff
(99.2 %id)
BY799344 eye .a 3137 to 3716 1 to 580       580/580
(100 %)
0 diff
(100 %id)
AA077576 brain .a 3297 to 3535 1 to 237       237/237
(100 %)
3 diff
(98.8 %id)
BQ721496 sympathetic trunk .a 3319 to 4259 1 to 964       964/964
(100 %)
48 diff
(95.1 %id)
CN364485 embryonic stem cells, cell lines H1, H7, andH9 .a 3358 to 3610 1 to 253       253/253
(100 %)
0 diff
(100 %id)
DA064569 cerebellum .a 3545 to 4103 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AL523868 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 4041 to 4900 867 to 6       862/978
(88 %)
0 diff
(100 %id)
BM681304 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4270 to 4921 669 to 19   tiling clone, AAA   651/651
(100 %)
1 diff
(99.9 %id)
CA398145 eye, RPE/choroid .a 4386 to 4917 555 to 24   AAA   532/532
(100 %)
0 diff
(100 %id)
BX418331 brain, fetal brain .b 1 to 990 1 to 991   tiling clone,   991/991
(100 %)
11 diff
(98.9 %id)
BM805212 brain, hippocampus .b 509 to 1228 66 to 792   tiling clone,   727/1232
(59 %)
25 diff
(98.0 %id)
BX434520 brain, fetal brain .b 3206 to 3983 784 to 1   tiling clone,   784/839
(93 %)
28 diff
(96.7 %id)
BM908015 brain, medulla .c 1 to 943 9 to 961   tiling clone,   953/1028
(92 %)
26 diff
(97.5 %id)
BQ639245 eye, retina .c 72 to 680 1 to 609       609/609
(100 %)
0 diff
(100 %id)
CD251272 brain, Pituitary .c 118 to 954 1 to 840       840/844
(99 %)
10 diff
(98.9 %id)
BQ222625 brain .c 147 to 1041 1 to 903       903/906
(99 %)
12 diff
(98.7 %id)
AA189153   .c 253 to 637 382 to 1       382/428
(89 %)
29 diff
(93.3 %id)
BQ068371 brain, neuroblastoma, cell line .c 257 to 888 78 to 723       646/1269
(50 %)
54 diff
(95.8 %id)
BG910319 anaplastic oligodendroglioma with 1p/19qloss, brain .c 387 to 1164 17 to 795       779/796
(97 %)
6 diff
(99.3 %id)
BX279911 anaplastic oligodendroglioma with 1p/19qloss, brain .c 394 to 829 1 to 436       436/436
(100 %)
0 diff
(100 %id)
BC026709.
matches multiple genes
anaplastic oligodendroglioma with 1p/19qloss, brain, Brain, anaplastic oligodendroglioma with1p/19q loss .c 394 to 1601 25 to 1232   tiling clone, available from MGC, AAA also hits gene SLC8A3 1208/1208
(100 %)
0 diff
(100 %id)
BM796429 Ascites, stomach .c 394 to 734 1 to 341       341/341
(100 %)
1 diff
(99.8 %id)
BX452131 brain, fetal brain .c 478 to 1115 47 to 684       638/933
(68 %)
28 diff
(97.0 %id)
TI_1948149457   .c 593 to 1524 1069 to 120       950/1315
(72 %)
0 diff
(100 %id)
TI_1948150338   .c 597 to 1524 1048 to 121       928/1313
(70 %)
0 diff
(100 %id)
TI_1948150042   .c 651 to 1524 992 to 124       869/1304
(66 %)
0 diff
(100 %id)
TI_1948149458   .c 657 to 1524 992 to 124       869/1289
(67 %)
0 diff
(100 %id)
TI_1948150041   .c 713 to 1524 944 to 118       827/1364
(60 %)
0 diff
(100 %id)
TI_1948150337   .c 744 to 1524 908 to 119       790/1411
(55 %)
0 diff
(100 %id)
TI_1948149753   .c 800 to 1524 871 to 132       740/1480
(50 %)
0 diff
(100 %id)
TI_1948149752   .c 806 to 1524 852 to 121       732/1385
(52 %)
0 diff
(100 %id)
BG910826 anaplastic oligodendroglioma with 1p/19qloss, brain .c 842 to 1019 1 to 178       178/178
(100 %)
2 diff
(98.9 %id)
TI_151782103   .c 845 to 1602 68 to 825   AAA   758/758
(100 %)
18 diff
(97.7 %id)
AA984056 schizophrenic brain S-11 frontal lobe .c 957 to 1493 1 to 533     Submitted on the opposite strand 533/533
(100 %)
14 diff
(97.4 %id)
BM712892 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 996 to 1147 1 to 152   fully sequenced,   152/152
(100 %)
0 diff
(100 %id)
AI955275 brain, four pooled pituitary adenomas .c 1056 to 1601 557 to 12   AAA   546/546
(100 %)
5 diff
(99.1 %id)
AW149601 brain, medulloblastoma .c 1107 to 1597 491 to 1       491/491
(100 %)
30 diff
(93.9 %id)
BM673746 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1117 to 1601 504 to 19   fully sequenced, AAA   486/486
(100 %)
2 diff
(99.6 %id)
AI934632 anaplastic oligodendroglioma, brain .c 1157 to 1602 448 to 3       446/459
(97 %)
0 diff
(100 %id)
BF475950 sciatic nerve .c 1194 to 1602 411 to 3   tiling clone,   409/411
(99 %)
0 diff
(100 %id)
AA284675 ovarian tumor, ovary .c 1241 to 1585 1 to 343       343/343
(100 %)
7 diff
(98.0 %id)
AA477008 ovarian tumor, ovary .c 1241 to 1599 1 to 358       358/359
(99 %)
5 diff
(98.7 %id)
BU742659 eye, fetal eye .c 1261 to 1601 359 to 19   AAA   341/341
(100 %)
5 diff
(98.6 %id)
BF111963 pooled .c 1275 to 1515 241 to 1       241/241
(100 %)
5 diff
(98.0 %id)
D61343   .c 1367 to 1582 1 to 222       222/241
(92 %)
18 diff
(92.6 %id)
BE539862 cervix .c 1407 to 1597 1 to 191       191/191
(100 %)
0 diff
(100 %id)
CR622253 HeLa cells Cot 25-normalized .d 1 to 1496 1 to 1496 exact tiling clone,   1496/1496
(100 %)
0 diff
(100 %id)
BX384543   .d 1 to 810 1 to 807   fully sequenced,   809/809
(100 %)
6 diff
(99.3 %id)
BC017485 Brain, neuroblastoma .d 146 to 1552 1 to 1406   available from MGC, AAA   1406/1406
(100 %)
1 diff
(100.0 %id)
BM697004 eye, lens .d 565 to 1193 1 to 629   fully sequenced,   629/629
(100 %)
3 diff
(99.6 %id)
BX362135   .d 595 to 1514 921 to 5       919/925
(99 %)
11 diff
(98.9 %id)
BU527028 epidermoid carcinoma, cell line, lung .d 668 to 1522 868 to 5     Submitted on the opposite strand 864/933
(92 %)
15 diff
(98.4 %id)
BX385789.
matches multiple genes
Placenta Cot 25-normalized .d 702 to 1516 813 to 1     also hits gene GPR180 815/813
(100 %)
11 diff
(98.7 %id)
BX363292   .d 749 to 1496 746 to 1   fully sequenced,   746/746
(100 %)
2 diff
(99.8 %id)
BU171055 eye, retinoblastoma .d 780 to 1534 1 to 755   AAA   755/755
(100 %)
0 diff
(100 %id)
BU628948 cell lines, Chondrosarcoma .d 924 to 1601 696 to 19   AAA   678/678
(100 %)
0 diff
(100 %id)
BM668037 eye, lens .d 1132 to 1552 439 to 19   fully sequenced, AAA   421/421
(100 %)
0 diff
(100 %id)
BX508266   .d 1452 to 2224 1 to 774   tiling clone,   774/782
(98 %)
10 diff
(98.8 %id)
AL558582 T cells from T cell leukemia .e 1 to 971 1 to 954 L7X L8X P9X L31C Q32R ... tiling clone,   956/954
(100 %)
55 diff
(94.3 %id)
BX365491   .e 1 to 828 1 to 825   tiling clone,   827/825
(100 %)
6 diff
(99.3 %id)
BI913022 brain .f 1 to 928 1 to 925 S197K K198Q K199E R200A S201Q ... tiling clone,   923/949
(97 %)
17 diff
(98.3 %id)
TI_57238529   .f 1 to 928 28 to 952 S197K K198Q K199E R200A S201Q ...     923/976
(94 %)
23 diff
(97.7 %id)
TI_151733917   .g 1 to 564 605 to 42 S2R P187A tiling clone,   564/1021
(55 %)
4 diff
(99.7 %id)
AA825150 carcinoid, lung .h 1 to 399 1 to 395   tiling clone, Submitted on the opposite strand 395/395
(100 %)
10 diff
(97.5 %id)
AW589400 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h 148 to 579 432 to 1   tiling clone,   432/432
(100 %)
12 diff
(97.3 %id)
CR609181 T cells (Jurkat cell line) Cot10-normalized .i 1 to 1717 1 to 1717 exact tiling clone,   1717/1717
(100 %)
0 diff
(100 %id)
BX362389   .i 1 to 834 1 to 834 R81X P82X H83X S84X P94X ... fully sequenced,   834/834
(100 %)
6 diff
(99.3 %id)
AL580368 T cells from T cell leukemia .i 731 to 1670 977 to 53     Submitted on the opposite strand 925/1061
(87 %)
0 diff
(100 %id)
BX362388   .i 804 to 1717 919 to 1   fully sequenced,   919/919
(100 %)
20 diff
(97.9 %id)
AL134803 brain .j 1 to 619 1 to 619 exact tiling clone,   619/619
(100 %)
0 diff
(100 %id)
AA663748 schizophrenic brain S-11 frontal lobe .j 22 to 377 1 to 354     Submitted on the opposite strand 354/354
(100 %)
8 diff
(97.8 %id)
BF957815 nervous_normal .j 552 to 1099 1 to 548   tiling clone,   548/548
(100 %)
11 diff
(98.0 %id)
BF945276 nervous_normal .j 797 to 1266 470 to 1   tiling clone, Submitted on the opposite strand 470/470
(100 %)
1 diff
(99.8 %id)
BF513449   .k 1 to 406 406 to 1 exact tiling clone,   406/406
(100 %)
1 diff
(99.8 %id)
AW901029 nervous_normal .l-u 1 to 368 1 to 371 H23Q N26D S27L Y28L D29S ... tiling clone,   371/371
(100 %)
13 diff
(96.5 %id)
AK297553 brain Gene MAST1, variant not shown         Suspected internal deletion, this clone was ignored    
AL520607 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized Gene MAST1, variant not shown         Suspected internal deletion, this clone was ignored    
DB317220 brain Gene MAST1, variant not shown         This clone was ignored    
DA521139 brain Gene MAST1, variant not shown       capped This clone was ignored    
BQ218903 epithelioid carcinoma, Pancreas Gene MAST1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI