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Gene MDGA2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
62 supporting clones for gene MDGA2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK309211 thalamus MDGA2.a 1 to 3526 2 to 3527 G50S E526Q R548K N573S V999I tiling clone,   3527/3527
(100 %)
7 diff
(99.9 %id)
DA403317 thalamus MDGA2.a 1 to 440 2 to 441   capped   440/549
(80 %)
3 diff
(99.5 %id)
NM_001113498.2   MDGA2.a 3 to 5546 1 to 5544 exact RefSeq,   5544/5544
(100 %)
0 diff
(100 %id)
DR000245 fetal brain MDGA2.a 172 to 807 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
AY369208   MDGA2.a 207 to 3854 1 to 3648   tiling clone,   3648/3648
(100 %)
0 diff
(100 %id)
AY358125   MDGA2.a 439 to 3384 20 to 2962       2943/2962
(99 %)
8 diff
(99.8 %id)
DN991225 brain, whole brain MDGA2.a 440 to 1028 13 to 601       589/601
(98 %)
6 diff
(99.1 %id)
DB081148 testis MDGA2.a 841 to 1354 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
AY328482   MDGA2.a 1370 to 3526 1 to 2157   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 2157/2157
(100 %)
0 diff
(100 %id)
BF726138 eye, lens MDGA2.a 1370 to 2059 1 to 690     Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 690/690
(100 %)
0 diff
(100 %id)
H05369 whole brain MDGA2.a 2352 to 2756 1 to 414       414/553
(74 %)
11 diff
(98.1 %id)
BG203954   MDGA2.a 2399 to 3039 21 to 661       641/798
(80 %)
32 diff
(96.0 %id)
BG185372   MDGA2.a 2413 to 3043 21 to 654       634/792
(80 %)
26 diff
(96.8 %id)
CR735175 melanotic melanoma, high MDR, skin MDGA2.a 2441 to 2838 1 to 398       398/398
(100 %)
1 diff
(99.8 %id)
BF977913 melanotic melanoma, high MDR, skin MDGA2.a 2441 to 3043 1 to 603       603/913
(66 %)
4 diff
(99.6 %id)
AL700554 human skeletal muscle MDGA2.a 2586 to 3132 1 to 547       547/547
(100 %)
0 diff
(100 %id)
W27378 eye, retina MDGA2.a 2776 to 3146 10 to 380       371/420
(88 %)
3 diff
(99.3 %id)
BM677591 eye, fetal eye MDGA2.a 2827 to 3544 718 to 1       718/718
(100 %)
0 diff
(100 %id)
DB340839 testis MDGA2.a 2909 to 3453 545 to 1       545/545
(100 %)
1 diff
(99.9 %id)
AI828162 anaplastic oligodendroglioma, brain MDGA2.a 2912 to 3122 211 to 1       211/211
(100 %)
10 diff
(95.3 %id)
AI859192 anaplastic oligodendroglioma, brain MDGA2.a 2912 to 3356 445 to 1       445/445
(100 %)
2 diff
(99.6 %id)
BF726137 eye, lens MDGA2.a 3254 to 3543 309 to 20   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 290/290
(100 %)
0 diff
(100 %id)
BX538065 human fetal brain MDGA2.a 3292 to 5076 1 to 1786   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 1786/1786
(100 %)
6 diff
(99.7 %id)
F07150 brain, total brain MDGA2.a 3411 to 3747 1 to 339       339/339
(100 %)
1 diff
(99.8 %id)
T78302 whole brain MDGA2.a 3411 to 3526 1 to 115     Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 115/115
(100 %)
3 diff
(97.4 %id)
R12082 whole brain MDGA2.a 3412 to 3526 1 to 115     Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 115/115
(100 %)
0 diff
(100 %id)
R19534 whole brain MDGA2.a 3412 to 3526 1 to 115       115/115
(100 %)
0 diff
(100 %id)
H10594 whole brain MDGA2.a 3412 to 3527 1 to 116     Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 116/116
(100 %)
0 diff
(100 %id)
H16708 whole brain MDGA2.a 3412 to 3854 1 to 451       451/451
(100 %)
15 diff
(96.7 %id)
AA234855 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus MDGA2.a 3577 to 3929 1 to 353       353/353
(100 %)
16 diff
(95.5 %id)
C15383   MDGA2.a 3658 to 4015 1 to 357   tiling clone,   357/361
(98 %)
4 diff
(98.9 %id)
C15417   MDGA2.a 3658 to 4029 1 to 371       371/371
(100 %)
4 diff
(99.0 %id)
D80597 brain MDGA2.a 3658 to 4007 1 to 347       347/348
(99 %)
7 diff
(98.0 %id)
D61241   MDGA2.a 3658 to 4031 1 to 373       373/373
(100 %)
2 diff
(99.5 %id)
C15449   MDGA2.a 3970 to 4375 1 to 405       405/405
(100 %)
1 diff
(99.8 %id)
BX099388 whole brain MDGA2.a 4548 to 5076 544 to 15   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 530/530
(100 %)
2 diff
(99.7 %id)
AW470823 2 pooled tumors (clear cell type), Kidney MDGA2.a 4590 to 5077 490 to 3   tiling clone,   488/490
(99 %)
0 diff
(100 %id)
H10387 whole brain MDGA2.a 4666 to 5076 440 to 18   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 423/425
(99 %)
21 diff
(95.1 %id)
R43887 whole brain MDGA2.a 4749 to 5072 331 to 1       331/333
(99 %)
11 diff
(96.7 %id)
R36875 whole brain MDGA2.a 4752 to 5076 351 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 333/333
(100 %)
14 diff
(95.8 %id)
H16709 whole brain MDGA2.a 4753 to 5086 350 to 9       342/350
(97 %)
0 diff
(100 %id)
R37942 whole brain MDGA2.a 4780 to 5076 317 to 18   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 300/300
(100 %)
4 diff
(98.7 %id)
Z40254 brain, total brain MDGA2.a 4843 to 5076 234 to 1       234/234
(100 %)
1 diff
(99.6 %id)
D51315   MDGA2.a 4868 to 5231 1 to 367       367/368
(99 %)
4 diff
(99.0 %id)
DB167157 kidney, tumor tissue MDGA2.a 4931 to 5493 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BU619918 cell lines, Chondrosarcoma MDGA2.a 4976 to 5756 792 to 12   tiling clone,   781/792
(98 %)
0 diff
(100 %id)
DA705966   MDGA2.a 4995 to 5546 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
NM_182830.3   MDGA2.b 1 to 5238 2 to 5239 exact RefSeq,   5239/5239
(100 %)
0 diff
(100 %id)
BI827613 brain, medulla MDGA2.b 43 to 731 1 to 687   tiling clone, available from MGC,   687/687
(100 %)
3 diff
(99.6 %id)
TI_57171508   MDGA2.b 43 to 731 70 to 756       687/756
(90 %)
7 diff
(99.1 %id)
BC142947 Clones donated by RIKEN MDGA2.c 1 to 3652 1 to 3652 V27I E420Q tiling clone, AAA   3652/3652
(100 %)
6 diff
(99.9 %id)
DB461014 testis MDGA2.c 4 to 661 1 to 658   tiling clone,   658/658
(100 %)
3 diff
(99.6 %id)
DB526422 testis MDGA2.c 2998 to 3652 1 to 655     Submitted on the opposite strand 655/655
(100 %)
2 diff
(99.7 %id)
BC028193 Brain, adult medulla MDGA2.d 1 to 1899 1 to 1899 K384E tiling clone, available from MGC, AAA   1899/1899
(100 %)
3 diff
(99.9 %id)
DB095976 testis MDGA2.e 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
DB041561 testis MDGA2.e 14 to 570 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB076303 testis MDGA2.e 22 to 577 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB050093 testis MDGA2.e 38 to 599 12 to 574   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DB337886 testis MDGA2.e 1324 to 1836 515 to 1   tiling clone,   515/515
(100 %)
2 diff
(99.7 %id)
CN430206 embryonic stem cells, cell lines H1, H7, andH9 MDGA2.f 1 to 759 1 to 759 exact tiling clone,   759/759
(100 %)
2 diff
(99.8 %id)
BU634335 cell lines, Chondrosarcoma MDGA2.g 1 to 742 759 to 19 S10I L11F S12P N13M E14K ... tiling clone, AAA   741/741
(100 %)
1 diff
(99.9 %id)
BG203457   MDGA2.h 1 to 607 5 to 610 G2D Q3S Q4S R5A W6G ... tiling clone, AAA   610/610
(100 %)
8 diff
(98.7 %id)
AK123307 amygdala MDGA2.i 1 to 2415 2 to 2415 A117T tiling clone, available from FLJ,   2415/2415
(100 %)
5 diff
(99.8 %id)
DA178678 amygdala MDGA2.i 1 to 563 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB302848 amygdala MDGA2.i 1831 to 2415 585 to 1       585/585
(100 %)
1 diff
(99.9 %id)
DB049469 testis MDGA2.j 1 to 567 8 to 574 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
DB074137 testis MDGA2.j 18 to 557 11 to 550   capped   540/540
(100 %)
2 diff
(99.7 %id)
DB075977 testis MDGA2.j 18 to 552 11 to 545   capped   535/535
(100 %)
2 diff
(99.7 %id)
DB347188 kidney, tumor tissue MDGA2.k-u 1 to 547 548 to 1 exact tiling clone,   548/548
(100 %)
1 diff
(99.9 %id)
AW593266 pooled MDGA2.l 1 to 494 495 to 2 exact tiling clone,   494/512
(96 %)
0 diff
(100 %id)
AA609150   MDGA2.l 118 to 494 379 to 3       377/379
(99 %)
0 diff
(100 %id)
N22833 melanocyte Gene MDGA2, variant not shown         This clone was ignored    
N28641 melanocyte Gene MDGA2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC