cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AK001910 | placenta | .l-u | 234 to 2234 | 1 to 1996 | tiling clone, available from FLJ, | 1996/1996 (100 %) | 7 diff (99.7 %id) | ||
AK027809 | placenta | .j | 758 to 2631 | 1 to 1874 | exact | tiling clone, available from FLJ, | 1874/1874 (100 %) | 1 diff (100.0 %id) | |
AK075131 | placenta | .a | 1479 to 3432 | 1 to 1954 | available from FLJ, | 1954/1954 (100 %) | 2 diff (99.9 %id) | ||
AK291655 | placenta | .a | 1 to 3238 | 2 to 3239 | L54S L689F | tiling clone, | 3239/3239 (100 %) | 7 diff (99.8 %id) | |
AY560010 | .a | 126 to 3432 | 1 to 3307 | R13H L54S P374S | tiling clone, | 3307/3307 (100 %) | 12 diff (99.7 %id) | ||
BC068560 | Placenta, normal | .b | 1 to 3306 | 1 to 3306 | L54S | tiling clone, available from MGC, AAA | 3306/3306 (100 %) | 5 diff (99.9 %id) | |
BC109022 | PCR rescued clones | .a | 150 to 3333 | 1 to 3184 | L54S L689F | 3184/3184 (100 %) | 6 diff (99.9 %id) | ||
BC109023 | PCR rescued clones | .a | 150 to 3333 | 1 to 3184 | L54S L689F | 3184/3184 (100 %) | 6 diff (99.9 %id) | ||
BE929699 | placenta_normal | .a | 3884 to 4221 | 338 to 1 | 338/338 (100 %) | 8 diff (97.7 %id) | |||
BF085726 | placenta_normal | .a | 3740 to 4274 | 535 to 1 | 535/535 (100 %) | 0 diff (100 %id) | |||
BF085727 | placenta_normal | .a | 3761 to 4274 | 514 to 1 | 514/514 (100 %) | 0 diff (100 %id) | |||
BF367501 | placenta_normal | .a | 3528 to 3786 | 1 to 259 | 259/259 (100 %) | 12 diff (95.4 %id) | |||
BF369246 | placenta_normal | .j | 1 to 434 | 1 to 431 | tiling clone, | 431/431 (100 %) | 5 diff (98.9 %id) | ||
BF993117 | placenta_normal | .i | 209 to 597 | 1 to 392 | tiling clone, | 392/392 (100 %) | 20 diff (94.9 %id) | ||
BF993938 | placenta_normal | .a | 330 to 698 | 24 to 400 | tiling clone, | 377/401 (94 %) | 28 diff (93.1 %id) | ||
BG206189 | .g | 1 to 620 | 622 to 4 | K5N L6F F7L V8* | tiling clone, | Submitted on the opposite strand | 619/622 (99 %) | 12 diff (98.1 %id) | |
BG208666 | .g | 1 to 602 | 4 to 607 | K42E L157S H158P T159H K160Q ... | tiling clone, | 607/607 (100 %) | 13 diff (97.9 %id) | ||
BG211371 | .h | 1 to 804 | 1 to 801 | S2H | tiling clone, | 801/805 (99 %) | 10 diff (98.8 %id) | ||
BI057666 | placenta_normal | .f | 3040 to 3557 | 548 to 30 | 519/572 (90 %) | 0 diff (100 %id) | |||
BX096521 | uterus | .a | 3650 to 4217 | 1 to 568 | AAA | 568/568 (100 %) | 0 diff (100 %id) | ||
BX281252 | testis | .a | 2981 to 3426 | 474 to 29 | AAA | Submitted on the opposite strand | 446/447 (99 %) | 2 diff (99.6 %id) | |
CR608077 | Placenta Cot 25-normalized | .c-u | 1 to 1754 | 1 to 1754 | exact | tiling clone, | 1754/1754 (100 %) | 0 diff (100 %id) | |
AL543134 | placenta, Placenta Cot 25-normalized | .c-u | 1 to 804 | 1 to 832 | fully sequenced, | 832/832 (100 %) | 24 diff (97.2 %id) | ||
AL569786 | placenta, Placenta Cot 25-normalized | .c-u | 774 to 1754 | 976 to 1 | fully sequenced, | 976/976 (100 %) | 21 diff (97.9 %id) | ||
DN930361 | pooled | .i | 88 to 317 | 1 to 230 | 230/230 (100 %) | 1 diff (99.6 %id) | |||
DN930362 | pooled | .i | 12 to 206 | 195 to 1 | Submitted on the opposite strand | 195/195 (100 %) | 0 diff (100 %id) | ||
DN930567 | pooled | .i | 6 to 203 | 197 to 1 | Submitted on the opposite strand | 197/197 (100 %) | 3 diff (98.5 %id) | ||
DR731442 | pooled | .i | 53 to 324 | 1 to 272 | 272/371 (73 %) | 5 diff (98.7 %id) | |||
DR731443 | pooled | .i | 1 to 256 | 256 to 1 | tiling clone, | Submitted on the opposite strand | 256/474 (54 %) | 0 diff (100 %id) | |
DT932734 | pooled | .k | 1 to 606 | 604 to 1 | I26F | tiling clone, | Submitted on the opposite strand | 479/604 (79 %) | 13 diff (97.9 %id) |
EL737152 | mixed | .a | 1627 to 2191 | 1 to 564 | 564/564 (100 %) | 1 diff (99.9 %id) | |||
DB452308 | testis | .f | 7 to 485 | 1 to 479 | 479/479 (100 %) | 1 diff (99.8 %id) | |||
DB517871 | testis | .a | 2996 to 3436 | 1 to 441 | Submitted on the opposite strand | 441/441 (100 %) | 1 diff (99.8 %id) | ||
BP418776 | small intestine | .l-u | 1 to 450 | 1 to 450 | exact | tiling clone, | Submitted on the opposite strand | 450/450 (100 %) | 1 diff (99.8 %id) |
R65871 | placenta | .a | 3860 to 4207 | 1 to 355 | 355/362 (98 %) | 11 diff (97.0 %id) | |||
N58022 | liver and spleen | .f | 3500 to 3667 | 168 to 1 | 168/168 (100 %) | 0 diff (100 %id) | |||
AA203555 | liver and spleen | .a | 3655 to 4334 | 1 to 673 | 673/864 (77 %) | 13 diff (98.5 %id) | |||
AA044442 | uterus | .a | 3839 to 4217 | 381 to 1 | 381/381 (100 %) | 3 diff (99.3 %id) | |||
AA042985 | uterus | .a | 3986 to 4220 | 235 to 1 | fully sequenced, | 235/235 (100 %) | 1 diff (99.6 %id) | ||
AA043040 | uterus | .a | 3649 to 4016 | 1 to 372 | fully sequenced, | 372/372 (100 %) | 0 diff (100 %id) | ||
AA418273 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .f | 3293 to 3666 | 1 to 374 | Submitted on the opposite strand | 374/374 (100 %) | 0 diff (100 %id) | ||
AA453164 | .l-u | 1890 to 2235 | 348 to 4 | tiling clone, | 345/348 (99 %) | 0 diff (100 %id) | |||
AA458616 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .f | 3303 to 3648 | 1 to 346 | 346/346 (100 %) | 5 diff (98.6 %id) | |||
AA453771 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .f | 3398 to 3667 | 270 to 1 | fully sequenced, | 270/270 (100 %) | 0 diff (100 %id) | ||
AA453854 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .f | 3247 to 3661 | 1 to 415 | fully sequenced, | 415/415 (100 %) | 3 diff (99.3 %id) | ||
AA883856 | pooled | .a | 3994 to 4217 | 236 to 13 | AAA | 224/224 (100 %) | 0 diff (100 %id) | ||
AI093739 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .f | 3286 to 3663 | 382 to 5 | 378/382 (98 %) | 0 diff (100 %id) | |||
AI089327 | uterus | .f | 3201 to 3665 | 467 to 3 | 465/467 (99 %) | 0 diff (100 %id) | |||
AI089453 | uterus | .a | 3757 to 4219 | 466 to 4 | 463/466 (99 %) | 0 diff (100 %id) | |||
AI146989 | uterus | .f | 3275 to 3666 | 424 to 33 | AAA | 392/392 (100 %) | 1 diff (99.8 %id) | ||
AI222989 | pooled | .b | 2706 to 3072 | 367 to 1 | 367/367 (100 %) | 0 diff (100 %id) | |||
AI246369 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .f | 3261 to 3666 | 430 to 25 | AAA | 406/406 (100 %) | 1 diff (99.8 %id) | ||
AI333894 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .a | 4038 to 4447 | 422 to 13 | AAA | 410/410 (100 %) | 0 diff (100 %id) | ||
AI760049 | pooled | .a | 3687 to 4211 | 545 to 20 | AAA | 526/526 (100 %) | 0 diff (100 %id) | ||
AI761854 | pooled | .f | 3201 to 3664 | 465 to 2 | 464/465 (99 %) | 0 diff (100 %id) | |||
BF436157 | pooled | .f | 3292 to 3669 | 382 to 4 | 379/387 (97 %) | 0 diff (100 %id) | |||
BF438793 | pooled | .a | 4065 to 4448 | 383 to 1 | tiling clone, | 383/383 (100 %) | 2 diff (99.5 %id) | ||
BG435438 | placenta | .a | 3530 to 4201 | 1 to 679 | tiling clone, | 679/691 (98 %) | 21 diff (97.0 %id) | ||
BG622690 | placenta | .n-u | 1 to 774 | 1 to 779 | T2D T3Q P4A I5Y E6G ... | tiling clone, | 779/780 (99 %) | 22 diff (97.2 %id) | |
BG623101 | placenta | .a | 995 to 1680 | 1 to 692 | 692/693 (99 %) | 17 diff (97.6 %id) | |||
BC094716 | testis | .f | 7 to 3666 | 1 to 3660 | exact | AAA | 3660/3660 (100 %) | 3 diff (100.0 %id) | |
BG719375 | testis | .f | 1 to 762 | 1 to 763 | tiling clone, | 763/766 (99 %) | 17 diff (97.8 %id) | ||
BC045809 | testis | .e | -9 to 2035 | 1 to 2045 | exact | tiling clone, available from MGC, AAA | 2045/2045 (100 %) | 4 diff (99.9 %id) | |
BG720834 | testis | .f | 22 to 704 | 1 to 683 | available from MGC, | 683/683 (100 %) | 12 diff (98.3 %id) | ||
BI829157 | brain, medulla | .j | 204 to 1077 | 1 to 871 | tiling clone, | 871/876 (99 %) | 22 diff (97.5 %id) | ||
BC070028 | testis | .f | 7 to 3666 | 1 to 3660 | exact | tiling clone, available from MGC, AAA | 3660/3660 (100 %) | 3 diff (100.0 %id) | |
BI459634 | testis | .f | 3 to 750 | 1 to 743 | available from MGC, | 743/743 (100 %) | 20 diff (97.4 %id) | ||
BC036440 | testis | .d | 1 to 2338 | 6 to 2343 | L206F | tiling clone, available from MGC, AAA | 2338/2338 (100 %) | 4 diff (99.9 %id) | |
BI461332 | testis | .f | 2 to 671 | 1 to 671 | available from MGC, | 671/671 (100 %) | 9 diff (98.7 %id) | ||
BQ717669 | sympathetic trunk | .a | 3204 to 4073 | 1 to 874 | tiling clone, | 874/874 (100 %) | 14 diff (98.4 %id) | ||
BU929399 | placenta | .a | 4186 to 4447 | 1 to 262 | 262/300 (87 %) | 2 diff (99.4 %id) | |||
CB990454 | Human Placenta, placenta | .a | 14 to 758 | 28 to 776 | 749/776 (96 %) | 6 diff (99.3 %id) | |||
CK004350 | brain/CNS, Human Brain - Cerebellar Cortex | .f | 3022 to 3675 | 1 to 646 | 646/653 (98 %) | 10 diff (98.5 %id) | |||
TI_57175888 | .j | 202 to 1077 | 70 to 942 | tiling clone, | 873/947 (92 %) | 23 diff (97.6 %id) | |||
NM_173800.4 | .a | 14 to 4633 | 1 to 4620 | exact | RefSeq, AAA | 4620/4620 (100 %) | 0 diff (100 %id) | ||
DA830114 | placenta | .a | 1480 to 2213 | 2 to 748 | capped | 744/828 (89 %) | 17 diff (98.0 %id) | ||
DB375140 | placenta | .a | 2933 to 3432 | 498 to 1 | 498/523 (95 %) | 7 diff (98.7 %id) | |||
AU136544 | placenta | .l-u | 235 to 918 | 2 to 690 | capped | 689/850 (81 %) | 9 diff (99.0 %id) | ||
AU156772 | placenta | .l-u | 1748 to 2234 | 484 to 1 | tiling clone, | 484/486 (99 %) | 11 diff (97.8 %id) | ||
DA830679 | placenta | .j | 759 to 1374 | 2 to 619 | R87X | capped | 618/618 (100 %) | 13 diff (97.9 %id) | |
DB375962 | placenta | .j | 2086 to 2631 | 547 to 1 | 547/547 (100 %) | 15 diff (97.3 %id) | |||
DB379390 | placenta | .m | 149 to 699 | 541 to 4 | tiling clone, | 538/579 (92 %) | 20 diff (96.6 %id) | ||
DA849628 | placenta | .a | 36 to 606 | 2 to 572 | capped | 571/572 (99 %) | 5 diff (99.2 %id) | ||
DA853860 | placenta | .a | 1 to 561 | 2 to 562 | capped | 561/561 (100 %) | 4 diff (99.3 %id) | ||
DA855843 | placenta | .a | 135 to 706 | 2 to 573 | capped | 572/572 (100 %) | 4 diff (99.4 %id) | ||
DA855882 | placenta | .a | 36 to 589 | 2 to 555 | capped | 554/554 (100 %) | 4 diff (99.3 %id) | ||
DA857941 | placenta | .a | 104 to 647 | 2 to 545 | capped | 544/544 (100 %) | 3 diff (99.5 %id) | ||
DA858167 | placenta | .a | 304 to 873 | 2 to 571 | capped | 570/570 (100 %) | 3 diff (99.5 %id) | ||
DA858803 | placenta | .a | 36 to 523 | 2 to 489 | capped | 488/488 (100 %) | 4 diff (99.2 %id) | ||
DA862145 | placenta | .a | 36 to 584 | 2 to 551 | capped | 550/550 (100 %) | 5 diff (99.1 %id) | ||
DA863864 | placenta | .a | 36 to 605 | 2 to 572 | capped | 571/571 (100 %) | 5 diff (99.2 %id) | ||
DR004704 | placenta | .a | 1998 to 2702 | 13 to 718 | 706/718 (98 %) | 9 diff (98.8 %id) | |||
DR005072 | placenta | .a | 112 to 766 | 1 to 655 | 655/655 (100 %) | 6 diff (99.1 %id) | |||
DB087781 | testis | .f | 37 to 600 | 2 to 566 | tiling clone, capped | 565/565 (100 %) | 2 diff (99.7 %id) | ||
DB215198 | trachea | .m | 1 to 538 | 2 to 540 | tiling clone, to resequence, capped | 539/539 (100 %) | 1 diff (99.9 %id) | ||
DB349020 | trachea | .m | 1418 to 1959 | 542 to 1 | exact | tiling clone, to resequence, | 542/542 (100 %) | 2 diff (99.7 %id) | |
CA414217 | Knee, Osteoarthritic Cartilage | .a | 3881 to 4447 | 581 to 14 | tiling clone, AAA | 568/585 (97 %) | 1 diff (99.9 %id) | ||
TI_891526434 | .i | 26 to 319 | 1 to 292 | tiling clone, fully sequenced, | 292/292 (100 %) | 8 diff (97.3 %id) | |||
TI_891526435 | .i | 83 to 287 | 208 to 6 | fully sequenced, | 203/208 (97 %) | 0 diff (100 %id) | |||
BC060869 | Placenta, normal | .a | 304 to 873 | 2 to 571 | available from MGC, AAA | Suspected internal deletion, this clone was ignored | 570/570 (100 %) | 3 diff (99.5 %id) | |
BX109576 | .a | 36 to 523 | 2 to 489 | This clone was ignored | 488/488 (100 %) | 4 diff (99.2 %id) | |||
CR740194 | liver and spleen | .a | 36 to 584 | 2 to 551 | Suspected internal deletion, this clone was ignored | 550/550 (100 %) | 5 diff (99.1 %id) | ||
CB960804 | Human Placenta, placenta | .a | 36 to 605 | 2 to 572 | Suspected internal deletion, this clone was ignored | 571/571 (100 %) | 5 diff (99.2 %id) | ||
CB959553 | Human Placenta, placenta | .a | 1998 to 2702 | 13 to 718 | Suspected internal deletion, this clone was ignored | 706/718 (98 %) | 9 diff (98.8 %id) | ||
DR005072 | placenta | .a | 112 to 766 | 1 to 655 | 655/655 (100 %) | 6 diff (99.1 %id) | |||
DB087781 | testis | .f | 37 to 600 | 2 to 566 | tiling clone, capped | 565/565 (100 %) | 2 diff (99.7 %id) | ||
DB215198 | trachea | .m | 1 to 538 | 2 to 540 | tiling clone, to resequence, capped | 539/539 (100 %) | 1 diff (99.9 %id) | ||
DB349020 | trachea | .m | 1418 to 1959 | 542 to 1 | exact | tiling clone, to resequence, | 542/542 (100 %) | 2 diff (99.7 %id) | |
CA414217 | Knee, Osteoarthritic Cartilage | .a | 3881 to 4447 | 581 to 14 | tiling clone, AAA | 568/585 (97 %) | 1 diff (99.9 %id) | ||
CA414217 | Knee, Osteoarthritic Cartilage | .a | 3881 to 4447 | 581 to 14 | tiling clone, AAA | 568/585 (97 %) | 1 diff (99.9 %id) | ||
TI_891526434 | .i | 26 to 319 | 1 to 292 | tiling clone, fully sequenced, | 292/292 (100 %) | 8 diff (97.3 %id) | |||
TI_891526435 | .i | 83 to 287 | 208 to 6 | fully sequenced, | 203/208 (97 %) | 0 diff (100 %id) |