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Gene LPCAT4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
252 supporting clones for gene LPCAT4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF542964 ovarian .a 1 to 1954 1 to 1953 V198C L199Y F200S P202L E203R ... tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 1953/1953
(100 %)
1 diff
(100.0 %id)
AY734233 testis .a 65 to 1962 1 to 1898 exact     1898/1898
(100 %)
0 diff
(100 %id)
BX441723 brain, fetal brain .a 65 to 923 1 to 854       854/854
(100 %)
31 diff
(96.4 %id)
BC048430 Brain, hypothalamus .a 83 to 1970 1 to 1888 Q35R P48T Q76* available from MGC, AAA   1888/1888
(100 %)
8 diff
(99.6 %id)
DA402631 thalamus .a 84 to 648 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
NM_153613.2   .a 85 to 1992 1 to 1908 exact RefSeq,   1908/1908
(100 %)
0 diff
(100 %id)
AL832237 human endometrium carcinoma cell line .a 88 to 1970 1 to 1883 R362K available from DKFZ, AAA   1883/1883
(100 %)
1 diff
(100.0 %id)
BC092463 Placenta, normal .a 88 to 1970 1 to 1883 exact tiling clone, AAA   1883/1883
(100 %)
0 diff
(100 %id)
CF993928 Human Placenta, placenta .a 88 to 638 28 to 590       563/1328
(42 %)
20 diff
(98.5 %id)
BQ067982 brain .a 92 to 655 13 to 578       566/1245
(45 %)
20 diff
(98.4 %id)
AL537684 brain, fetal brain .a 93 to 979 1 to 886       886/886
(100 %)
12 diff
(98.7 %id)
DB497594 hypothalamus .a 97 to 589 1 to 493       493/493
(100 %)
0 diff
(100 %id)
DC324779 brain .a 103 to 701 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
DA382919 thalamus .a 104 to 728 2 to 626   capped   625/625
(100 %)
1 diff
(99.9 %id)
BU145734 dorsal root ganglia .a 104 to 656 1 to 555       555/1010
(54 %)
9 diff
(99.2 %id)
CD518113 White Matter .a 104 to 743 1 to 646       644/995
(64 %)
19 diff
(98.1 %id)
BP354575   .a 111 to 691 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
AK290273 colon .a 114 to 1970 1 to 1857 exact     1857/1857
(100 %)
0 diff
(100 %id)
DA109394 cerebellum .a 115 to 709 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
DA147616 amygdala .a 115 to 681 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA352799 substantia nigra .a 115 to 691 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA429189 colon .a 115 to 506 2 to 393   capped   392/392
(100 %)
3 diff
(99.3 %id)
DA430206 colon .a 115 to 690 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DN997024 breast cancer, Mammary gland (cancer tissue) .a 121 to 712 1 to 591       591/591
(100 %)
8 diff
(98.7 %id)
DA281451 corpus callosum .a 122 to 672 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
CR617279 Neuroblastoma Cot 25-normalized .a 135 to 1951 1 to 1817 exact     1817/1817
(100 %)
0 diff
(100 %id)
AL526522 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 135 to 1012 1 to 873   fully sequenced,   873/873
(100 %)
5 diff
(99.5 %id)
TI_2194643402   .a 157 to 831 65 to 740     Submitted on the opposite strand 676/805
(83 %)
11 diff
(98.7 %id)
TI_2194645859   .a 157 to 1179 64 to 1089     Submitted on the opposite strand 1026/1273
(80 %)
16 diff
(98.8 %id)
BC144236 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 157 to 1369 1 to 1213       1213/1213
(100 %)
0 diff
(100 %id)
AA315944 colon .a 221 to 657 20 to 455       436/460
(94 %)
8 diff
(98.3 %id)
AF529233 ovary .a 234 to 1954 1 to 1719   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 1719/1719
(100 %)
2 diff
(99.9 %id)
BE747946 adenocarcinoma cell line, ovary .a 241 to 978 7 to 741       737/1020
(72 %)
17 diff
(98.4 %id)
CB163412 Liver .a 249 to 815 1 to 564       564/564
(100 %)
3 diff
(99.5 %id)
AA090326   .a 268 to 470 1 to 204       204/206
(99 %)
4 diff
(98.1 %id)
CR747459 large cell carcinoma, lung .a 285 to 788 11 to 514       504/514
(98 %)
0 diff
(100 %id)
CR747735 large cell carcinoma, lung .a 285 to 764 11 to 490       480/490
(97 %)
0 diff
(100 %id)
BQ225643 large cell carcinoma, lung .a 288 to 1063 1 to 783       781/807
(96 %)
14 diff
(98.3 %id)
CA489450   .a 293 to 1028 1 to 744       742/942
(78 %)
7 diff
(99.3 %id)
TI_2194643394   .a 296 to 1369 1127 to 59     Submitted on the opposite strand 1069/1224
(87 %)
18 diff
(98.6 %id)
AW897062 nervous_normal .a 310 to 648 403 to 62       342/403
(84 %)
1 diff
(99.8 %id)
CN348304 embryonic stem cells, cell lines H1, H7, andH9 .a 320 to 1011 1 to 695       693/695
(99 %)
9 diff
(98.8 %id)
TI_2194645477   .a 342 to 1369 1069 to 53     Submitted on the opposite strand 1017/1246
(81 %)
16 diff
(98.8 %id)
F12197 brain, total brain .a 345 to 640 1 to 296       296/296
(100 %)
1 diff
(99.7 %id)
R55684 whole brain .a 346 to 769 1 to 429     Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 429/449
(95 %)
7 diff
(98.5 %id)
H08045 whole brain .a 346 to 719 1 to 374     Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 374/374
(100 %)
2 diff
(99.5 %id)
T66213 whole brain .a 349 to 889 1 to 532       534/532
(100 %)
16 diff
(97.0 %id)
BP219221 caudate nucleus .a 369 to 954 1 to 587       587/587
(100 %)
5 diff
(99.2 %id)
TI_57183524   .a 372 to 1150 51 to 830       780/868
(89 %)
26 diff
(97.1 %id)
CF552999 Pooled muscle (cardiac and skeletal) .a 378 to 922 1 to 550       550/939
(58 %)
14 diff
(98.6 %id)
CX164451 human embryonic stem cells differentiated toan early endodermal cell type .a 383 to 1209 1 to 827       827/827
(100 %)
0 diff
(100 %id)
R88200 brain .a 385 to 720 1 to 337       337/337
(100 %)
1 diff
(99.8 %id)
BI770616 pooled lung and spleen .a 388 to 1150 1 to 764       764/802
(95 %)
20 diff
(97.6 %id)
AA295772 Pancreas .a 396 to 694 1 to 300       300/301
(99 %)
6 diff
(98.1 %id)
Z45158 brain, total brain .a 422 to 731 1 to 310       310/310
(100 %)
1 diff
(99.7 %id)
R54532 whole brain .a 423 to 890 1 to 484       484/499
(96 %)
14 diff
(97.2 %id)
AA300937 testis .a 430 to 532 1 to 103       103/103
(100 %)
3 diff
(97.1 %id)
CD245800 White Matter .a 430 to 830 1 to 398       396/1019
(38 %)
7 diff
(99.4 %id)
BI032791 nervous_normal .a 450 to 888 439 to 1       439/443
(99 %)
2 diff
(99.6 %id)
BI032788 nervous_normal .a 452 to 791 7 to 343       337/343
(98 %)
5 diff
(98.6 %id)
BG958389 colon .a 493 to 1061 12 to 573       562/573
(98 %)
8 diff
(98.7 %id)
BG958380 colon .a 505 to 1129 22 to 645       624/645
(96 %)
9 diff
(98.7 %id)
H46943 brain .a 570 to 938 1 to 371       367/372
(98 %)
4 diff
(99.0 %id)
AA481006 ovarian tumor, ovary .a 585 to 1154 1 to 562       562/564
(99 %)
9 diff
(98.5 %id)
BE871822 adenocarcinoma, colon .a 607 to 1180 1 to 580       580/729
(79 %)
18 diff
(97.6 %id)
BU158863 large cell carcinoma, lung .a 607 to 1421 1 to 824       824/889
(92 %)
12 diff
(98.7 %id)
CN348303 embryonic stem cells, cell lines H1, H7, andH9 .a 612 to 1208 1 to 597       597/597
(100 %)
0 diff
(100 %id)
BE314852 brain, neuroblastoma .a 637 to 1260 52 to 700       624/738
(84 %)
57 diff
(92.3 %id)
BI917801 brain .a 737 to 1234 1 to 510       510/667
(76 %)
21 diff
(96.9 %id)
CA453462 mixed (pool of 40 RNAs) .a 739 to 1412 1 to 690       687/833
(82 %)
25 diff
(97.0 %id)
BX451625 brain, fetal brain .a 793 to 1711 1 to 909       911/909
(100 %)
19 diff
(98.0 %id)
BX451626 brain, fetal brain .a 793 to 1731 1 to 940       941/940
(100 %)
38 diff
(96.0 %id)
BG676418 skin, squamous cell carcinoma .a 793 to 1600 1 to 809       809/993
(81 %)
27 diff
(97.3 %id)
CN348306 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 802 to 1584 1 to 783       783/783
(100 %)
0 diff
(100 %id)
BF083384 colon .a 851 to 1060 11 to 218       208/218
(95 %)
8 diff
(96.4 %id)
BF083385 colon .a 858 to 1060 1 to 203       203/203
(100 %)
3 diff
(98.6 %id)
AA355247   .a 860 to 1139 1 to 282       282/282
(100 %)
2 diff
(99.3 %id)
AW958468   .a 861 to 1419 1 to 565       565/623
(90 %)
10 diff
(98.4 %id)
CN348310 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 862 to 1518 1 to 656       656/656
(100 %)
3 diff
(99.6 %id)
AA745359 Prostate, stroma .a 898 to 1330 434 to 3       432/434
(99 %)
0 diff
(100 %id)
AA744416 Prostate, stroma .a 899 to 1330 436 to 7       430/436
(98 %)
8 diff
(98.2 %id)
AW820590 stomach .a 908 to 1134 229 to 2       228/231
(98 %)
2 diff
(99.2 %id)
BG026095 Bone, osteosarcoma, cell line .a 909 to 1565 1 to 652   available from MGC,   652/653
(99 %)
10 diff
(98.5 %id)
BG743005 skin .a 910 to 1773 1 to 858       858/859
(99 %)
22 diff
(97.5 %id)
AA745453 Prostate, stroma .a 911 to 1330 425 to 8       418/425
(98 %)
9 diff
(97.9 %id)
BE894483 melanotic melanoma, skin .a 916 to 1453 1 to 538       538/546
(98 %)
0 diff
(100 %id)
BC024892 Bone, osteosarcoma .a 926 to 1954 1 to 1029   available from MGC, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 1029/1029
(100 %)
0 diff
(100 %id)
DN992711 brain, whole brain .a 932 to 1503 1 to 572       572/572
(100 %)
5 diff
(99.2 %id)
H69808 liver and spleen .a 948 to 1194 1 to 247       247/248
(99 %)
4 diff
(98.4 %id)
AL526476 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 949 to 1951 1000 to 1   fully sequenced,   1000/1000
(100 %)
7 diff
(99.3 %id)
BG956478 colon .a 974 to 1264 1 to 286       287/286
(100 %)
11 diff
(96.2 %id)
TI_57152415   .a 999 to 1822 27 to 848       822/848
(96 %)
13 diff
(98.5 %id)
BI765493 pooled colon, kidney, stomach .a 1007 to 1822 1 to 814       814/814
(100 %)
7 diff
(99.2 %id)
AA744390 Prostate, stroma .a 1011 to 1330 324 to 7       318/324
(98 %)
7 diff
(97.9 %id)
BX441722 brain, fetal brain .a 1014 to 1956 942 to 1       699/942
(74 %)
40 diff
(95.8 %id)
BQ933396 large cell carcinoma, lung .a 1080 to 1655 1 to 582       582/1042
(55 %)
27 diff
(97.5 %id)
BM759988 Ascites, stomach .a 1083 to 1391 1 to 309       309/309
(100 %)
0 diff
(100 %id)
BM771866 Ascites, stomach .a 1083 to 1740 1 to 658       658/658
(100 %)
0 diff
(100 %id)
BM906933 brain, hippocampus .a 1122 to 1944 13 to 835       823/1111
(74 %)
31 diff
(97.3 %id)
BG951517 colon .a 1153 to 1588 1 to 435       435/435
(100 %)
9 diff
(98.0 %id)
TI_149297188   .a 1188 to 1954 854 to 88   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 767/959
(79 %)
4 diff
(99.6 %id)
BU633228 cell lines, Chondrosarcoma .a 1188 to 1954 783 to 19   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 765/771
(99 %)
4 diff
(99.5 %id)
BG987067 head_neck .a 1189 to 1614 433 to 7       427/433
(98 %)
12 diff
(97.3 %id)
BM688678 eye, optic nerve .a 1220 to 1660 1 to 439       439/439
(100 %)
5 diff
(98.9 %id)
BF949279 nervous_normal .a 1223 to 1631 1 to 410       410/426
(96 %)
12 diff
(97.2 %id)
BM932070 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1228 to 1608 1 to 381   fully sequenced,   381/381
(100 %)
0 diff
(100 %id)
BM982302 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1252 to 1954 721 to 19   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 703/703
(100 %)
0 diff
(100 %id)
TI_149294331   .a 1271 to 1974 789 to 87   AAA   703/704
(99 %)
7 diff
(99.1 %id)
BM549302 melanotic melanoma, skin .a 1303 to 1971 13 to 681       669/687
(97 %)
8 diff
(98.9 %id)
CA310922 Human Lung Epithelial cells, lung .a 1307 to 1974 686 to 19   AAA   668/668
(100 %)
0 diff
(100 %id)
BU683111 lung .a 1319 to 1974 673 to 19   AAA   655/655
(100 %)
2 diff
(99.7 %id)
AW607215 head_neck .a 1326 to 1646 330 to 10       321/334
(96 %)
11 diff
(96.8 %id)
BF229357 colon_ins .a 1334 to 1712 384 to 7       378/384
(98 %)
0 diff
(100 %id)
BF800593 colon_ins .a 1334 to 1712 384 to 7     Submitted on the opposite strand 378/384
(98 %)
0 diff
(100 %id)
BM725449 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1352 to 1843 1 to 492       492/492
(100 %)
0 diff
(100 %id)
BU860777 mixed (pool of 40 RNAs) .a 1358 to 1969 1 to 611       611/645
(94 %)
4 diff
(99.4 %id)
TI_158431492   .a 1382 to 1970 692 to 100   AAA   593/973
(60 %)
20 diff
(98.0 %id)
R99148 liver and spleen .a 1392 to 1933 1 to 566   fully sequenced,   505/505
(100 %)
23 diff
(95.5 %id)
BE536606 cervix .a 1401 to 1970 1 to 569   AAA   569/569
(100 %)
8 diff
(98.6 %id)
TI_154105368   .a 1406 to 1970 660 to 96   AAA   565/701
(80 %)
3 diff
(99.6 %id)
CA446636 Chondrosarcoma, Left Pubic Bone .a 1406 to 1970 583 to 19   AAA   565/568
(99 %)
3 diff
(99.5 %id)
BM679838 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1427 to 1974 566 to 19   AAA   548/548
(100 %)
0 diff
(100 %id)
BF438023 carcinoid, lung .a 1442 to 1975 534 to 1       534/534
(100 %)
1 diff
(99.9 %id)
BG231782 blood, lymphocyte .a 1452 to 1953 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AI346506 adenocarcinoma, colon .a 1453 to 1974 521 to 1       521/521
(100 %)
1 diff
(99.9 %id)
AI916318 carcinoid, lung .a 1453 to 1971 522 to 6       517/522
(99 %)
0 diff
(100 %id)
AI693629 carcinoid, lung .a 1454 to 1969 515 to 1       515/515
(100 %)
2 diff
(99.7 %id)
AI808371 pooled .a 1458 to 1960 503 to 1       503/503
(100 %)
3 diff
(99.5 %id)
AI698170 carcinoid, lung .a 1459 to 1971 513 to 1       513/513
(100 %)
0 diff
(100 %id)
AI492123 B-cell, chronic lymphotic leukemia .a 1473 to 1954 482 to 1       482/482
(100 %)
1 diff
(99.8 %id)
AI832385 colon .a 1482 to 1954 492 to 17   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 476/476
(100 %)
15 diff
(96.9 %id)
DB568693 hypothalamus .a 1489 to 1974 1 to 485     Submitted on the opposite strand 485/485
(100 %)
5 diff
(99.0 %id)
N78840.
matches multiple genes
lung .a 1495 to 1954 469 to 1     also hits gene SFTPC 469/469
(100 %)
13 diff
(97.3 %id)
AW083792 colon, moderately differentiated adenocarcinoma .a 1497 to 1975 486 to 9       478/486
(98 %)
1 diff
(99.8 %id)
AI860659 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1500 to 1971 477 to 6       472/477
(98 %)
0 diff
(100 %id)
AI298294 carcinoid, lung .a 1506 to 1956 451 to 1       451/451
(100 %)
0 diff
(100 %id)
BE220493 carcinoid, lung .a 1513 to 1971 460 to 2       459/461
(99 %)
0 diff
(100 %id)
H28998 whole brain .a 1514 to 1971 471 to 8       462/477
(96 %)
9 diff
(98.2 %id)
AA774467   .a 1515 to 1957 442 to 1       442/442
(100 %)
3 diff
(99.4 %id)
AI681364 carcinoid, lung .a 1516 to 1969 453 to 1       453/453
(100 %)
2 diff
(99.6 %id)
BM976289 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1516 to 1954 457 to 19   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 439/439
(100 %)
0 diff
(100 %id)
CA424470 cell lines, Chondrosarcoma .a 1520 to 1974 472 to 19   AAA   454/454
(100 %)
3 diff
(99.4 %id)
AI377296 pooled .a 1523 to 1975 460 to 8       453/460
(98 %)
3 diff
(99.4 %id)
AA481745 ovarian tumor, ovary .a 1526 to 1970 443 to 1       443/443
(100 %)
2 diff
(99.6 %id)
AI299866 carcinoid, lung .a 1527 to 1971 445 to 1       445/445
(100 %)
0 diff
(100 %id)
BP397006 pancreatic islet .a 1537 to 1910 1 to 375     Submitted on the opposite strand 375/375
(100 %)
1 diff
(99.8 %id)
AI143985 uterus .a 1541 to 1970 445 to 16   AAA   430/430
(100 %)
5 diff
(98.9 %id)
AA035644 uterus .a 1542 to 1971 435 to 4       432/435
(99 %)
1 diff
(99.8 %id)
AW236811 pooled germ cell tumors .a 1543 to 1954 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
BM685089 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1547 to 1970 442 to 19   fully sequenced, AAA   424/424
(100 %)
0 diff
(100 %id)
AI917565 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1551 to 1956 405 to 1       405/405
(100 %)
4 diff
(99.1 %id)
BX108698 whole brain .a 1555 to 1971 432 to 15   AAA   418/418
(100 %)
3 diff
(99.3 %id)
AA987358 carcinoid, lung .a 1560 to 1971 411 to 1       411/411
(100 %)
1 diff
(99.8 %id)
AI459849 colon .a 1561 to 1954 394 to 1       394/394
(100 %)
6 diff
(98.5 %id)
AI299645 carcinoid, lung .a 1578 to 1971 395 to 2       394/404
(97 %)
0 diff
(100 %id)
BF111588 pooled .a 1578 to 1970 392 to 1       392/393
(99 %)
1 diff
(99.8 %id)
H07939 whole brain .a 1581 to 1954 405 to 13   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 393/396
(99 %)
25 diff
(93.7 %id)
H18288 brain .a 1584 to 1961 1 to 381       381/387
(98 %)
4 diff
(99.0 %id)
H51338 brain .a 1585 to 1761 1 to 177       177/177
(100 %)
0 diff
(100 %id)
AA975345 carcinoid, lung .a 1588 to 1970 383 to 1       383/383
(100 %)
3 diff
(99.3 %id)
AI122963 pooled .a 1590 to 1959 370 to 1       370/370
(100 %)
0 diff
(100 %id)
AA987223 carcinoid, lung .a 1590 to 1970 380 to 1       380/380
(100 %)
2 diff
(99.5 %id)
BX376640 Neuroblastoma Cot 50-normalized .a 1598 to 1973 1 to 376       376/378
(99 %)
2 diff
(99.5 %id)
AW136153   .a 1598 to 1970 390 to 18   AAA   373/373
(100 %)
0 diff
(100 %id)
BM987090 mixed .a 1601 to 1970 388 to 19   AAA   370/370
(100 %)
1 diff
(99.8 %id)
R55685 whole brain .a 1605 to 1954 361 to 12   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 350/352
(99 %)
3 diff
(99.2 %id)
AA992883   .a 1605 to 1971 372 to 6       367/372
(98 %)
0 diff
(100 %id)
F09827 brain, total brain .a 1611 to 1954 344 to 1       344/344
(100 %)
0 diff
(100 %id)
AW418590 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1625 to 1954 330 to 1       330/330
(100 %)
2 diff
(99.4 %id)
H48447 liver and spleen .a 1637 to 1962 336 to 1   fully sequenced,   336/336
(100 %)
8 diff
(97.7 %id)
AW844220 colon_normal .a 1645 to 1862 221 to 4       218/236
(92 %)
0 diff
(100 %id)
R42403 whole brain .a 1652 to 1954 320 to 13   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 308/315
(97 %)
15 diff
(95.3 %id)
AW192055 adenocarcinoma, Pancreas .a 1652 to 1954 303 to 1       303/303
(100 %)
0 diff
(100 %id)
R54435 whole brain .a 1653 to 1970 337 to 11   AAA   327/327
(100 %)
11 diff
(96.7 %id)
AA827984 colon, colon tumor .a 1657 to 1961 304 to 1       304/304
(100 %)
5 diff
(98.4 %id)
AI745480 ovary, tumor, 5 pooled (see description) .a 1660 to 1971 320 to 9       312/320
(97 %)
0 diff
(100 %id)
BG232019 blood, lymphocyte .a 1660 to 1962 304 to 2       303/304
(99 %)
0 diff
(100 %id)
AW593289 pooled .a 1661 to 1975 318 to 4       315/318
(99 %)
0 diff
(100 %id)
CN348311 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1662 to 1963 302 to 1     Submitted on the opposite strand 302/302
(100 %)
0 diff
(100 %id)
AA972155 pooled .a 1662 to 1957 296 to 1       296/296
(100 %)
0 diff
(100 %id)
AW294367   .a 1676 to 1970 309 to 18   AAA   292/292
(100 %)
4 diff
(98.7 %id)
F04052 brain, total brain .a 1678 to 1970 293 to 1       293/293
(100 %)
0 diff
(100 %id)
T29943 Pancreas .a 1683 to 2031 1 to 349       349/349
(100 %)
6 diff
(98.3 %id)
AW964267   .a 1684 to 2262 1 to 579   tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 579/579
(100 %)
1 diff
(99.9 %id)
T07816   .a 1688 to 1974 289 to 1       289/291
(99 %)
4 diff
(98.7 %id)
AL047550 uterus .a 1700 to 1954 1 to 255   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 255/255
(100 %)
0 diff
(100 %id)
BG116453 duodenal adenocarcinoma, cell line, small intestine .a 1702 to 1954 1 to 253   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 253/253
(100 %)
0 diff
(100 %id)
AI984917 Kidney .a 1710 to 1907 198 to 1       198/198
(100 %)
0 diff
(100 %id)
AI382544 anaplastic oligodendroglioma, brain .a 1713 to 1955 240 to 1       240/240
(100 %)
4 diff
(98.4 %id)
AI290682 carcinoid, lung .a 1733 to 1970 266 to 29   AAA   238/238
(100 %)
1 diff
(99.6 %id)
AA508768 colon .a 1752 to 1954 226 to 24   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 203/203
(100 %)
0 diff
(100 %id)
AA508781 colon .a 1752 to 1954 226 to 24   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 203/203
(100 %)
0 diff
(100 %id)
F11088 brain, total brain .a 1774 to 1954 181 to 1       181/181
(100 %)
1 diff
(99.5 %id)
AW844121 colon_normal .a 1781 to 1895 1 to 115       115/131
(87 %)
7 diff
(94.7 %id)
BU727047 eye, optic nerve .a 1811 to 1974 182 to 19   AAA   164/164
(100 %)
0 diff
(100 %id)
R20497 whole brain .b 1 to 341 1 to 349   tiling clone,   349/349
(100 %)
14 diff
(96.0 %id)
R45317 whole brain .b 1262 to 1738 487 to 1   tiling clone,   485/490
(98 %)
17 diff
(96.6 %id)
BQ067441 pooled brain, lung, testis .c 1 to 577 1 to 579   tiling clone,   579/1270
(45 %)
6 diff
(99.6 %id)
TI_57182901   .c 542 to 1294 31 to 782   tiling clone,   752/782
(96 %)
7 diff
(99.2 %id)
BI771510 pooled lung and spleen .c 546 to 1294 1 to 748   tiling clone,   748/748
(100 %)
1 diff
(99.9 %id)
AK308910 brain .d 1 to 915 1 to 915 exact tiling clone,   915/915
(100 %)
1 diff
(99.9 %id)
DA243099 brain .d 810 to 1393 2 to 585   tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
CN348307 embryonic stem cells, cell lines H1, H7, andH9 .d 1119 to 1697 1 to 579   tiling clone,   579/579
(100 %)
1 diff
(99.9 %id)
AW890525 nervous_tumor .d 1176 to 1455 288 to 14       275/289
(95 %)
0 diff
(100 %id)
AF007155 brain .d 1619 to 2976 11 to 1369   tiling clone, AAA   1360/1369
(99 %)
7 diff
(99.5 %id)
BG698851 skin .d 1698 to 2599 1 to 890   tiling clone,   888/894
(99 %)
39 diff
(95.7 %id)
TI_149302305   .d 2071 to 2976 985 to 84   AAA   902/980
(92 %)
15 diff
(98.5 %id)
TI_149301906   .d 2171 to 2976 890 to 90   AAA   801/951
(84 %)
10 diff
(99.0 %id)
TI_149300152   .d 2189 to 2960 818 to 57   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 762/803
(94 %)
31 diff
(96.2 %id)
BM980186 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 2329 to 2976 666 to 19   AAA   648/648
(100 %)
0 diff
(100 %id)
BM980527 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 2335 to 2976 660 to 19   AAA   642/642
(100 %)
0 diff
(100 %id)
T77104 whole brain .e 1 to 198 1 to 195   tiling clone,   195/198
(98 %)
6 diff
(97.0 %id)
CN348305 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 2 to 660 9 to 668 D154R tiling clone,   660/668
(98 %)
7 diff
(99.0 %id)
R38173 whole brain .e 537 to 847 322 to 8   tiling clone,   315/349
(90 %)
0 diff
(100 %id)
BC028209 Blood, adult leukocytes .f 1 to 607 607 to 1   tiling clone, available from MGC, Submitted on the opposite strand 607/607
(100 %)
0 diff
(100 %id)
BI908731 leukocyte .f 3 to 607 619 to 1   available from MGC, Submitted on the opposite strand 617/623
(99 %)
16 diff
(97.5 %id)
TI_57234653   .f 3 to 554 652 to 91     Submitted on the opposite strand 562/731
(76 %)
10 diff
(98.7 %id)
CN282845 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 530 to 900 1 to 371   tiling clone,   371/371
(100 %)
2 diff
(99.5 %id)
DA094736 cerebellum .g 1 to 558 2 to 559   tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
BQ323815 colon_ins .g 148 to 633 551 to 70   tiling clone,   482/551
(87 %)
17 diff
(97.0 %id)
DA552451   .g 567 to 1140 2 to 575 exact tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
TI_57243920   .g 635 to 1267 38 to 704       581/704
(82 %)
38 diff
(94.7 %id)
CN348309 embryonic stem cells, cell lines H1, H7, andH9 .g 1007 to 1532 1 to 526       526/526
(100 %)
2 diff
(99.7 %id)
CU445212 epidermis .g 1012 to 1713 709 to 8   tiling clone, Submitted on the opposite strand 702/720
(97 %)
7 diff
(99.1 %id)
CU453531 epidermis .g 1012 to 1713 709 to 8     Submitted on the opposite strand 702/720
(97 %)
6 diff
(99.2 %id)
BI041204 nervous_tumor .g 1223 to 1510 1 to 288       288/288
(100 %)
0 diff
(100 %id)
AA322954 brain, cerebellum .g 1357 to 1715 1 to 361       361/361
(100 %)
3 diff
(99.2 %id)
AA324434 brain, cerebellum .g 1357 to 1715 1 to 363       363/364
(99 %)
5 diff
(98.7 %id)
BM805330 brain, hippocampus .g 1368 to 2064 75 to 777   tiling clone,   703/1220
(57 %)
16 diff
(98.7 %id)
BF883409 lung_tumor .g 1713 to 2237 10 to 538   tiling clone,   529/538
(98 %)
6 diff
(98.9 %id)
AA702500 liver and spleen .g 2087 to 2686 600 to 1       600/600
(100 %)
9 diff
(98.5 %id)
BX095795 heart .g 2125 to 2534 1 to 410       410/410
(100 %)
2 diff
(99.6 %id)
DB318398   .g 2133 to 2688 558 to 1       558/558
(100 %)
4 diff
(99.3 %id)
AW131840 brain, medulloblastoma .g 2214 to 2693 481 to 2   tiling clone,   480/481
(99 %)
0 diff
(100 %id)
AI127423 heart .g 2234 to 2688 454 to 1       454/454
(100 %)
1 diff
(99.8 %id)
AI935614 Kidney .g 2277 to 2691 415 to 1       415/423
(98 %)
27 diff
(93.7 %id)
AI889513 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 1 to 602 602 to 1 exact tiling clone,   602/602
(100 %)
0 diff
(100 %id)
T07314   .i-u 1 to 383 1 to 389 P100X P102X R108K V110S G111X ... tiling clone,   389/389
(100 %)
7 diff
(98.3 %id)
CN348308 embryonic stem cells, cell lines H1, H7, andH9 .i-u 308 to 990 1 to 683   tiling clone,   683/683
(100 %)
2 diff
(99.8 %id)
AI679759 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .i-u 914 to 1517 619 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (25/28 A in genome downstream of last aligned base) 604/604
(100 %)
9 diff
(98.6 %id)
DN992146 brain, whole brain .j 1 to 575 1 to 575 exact tiling clone,   575/575
(100 %)
5 diff
(99.2 %id)
DA116466 cerebellum .k 1 to 579 2 to 581   tiling clone, capped   580/580
(100 %)
2 diff
(99.7 %id)
DA098200 cerebellum .k 24 to 568 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA106472 cerebellum .k 24 to 587 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB107631 thymus .k 24 to 591 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB108617 thymus .k 24 to 575 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA199736 brain .k 55 to 595 2 to 542   tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
DA244399 brain .k 207 to 797 2 to 592   tiling clone, capped   591/591
(100 %)
0 diff
(100 %id)
AW297858   .k 382 to 788 1 to 407     Submitted on the opposite strand 407/407
(100 %)
1 diff
(99.8 %id)
CB146465 Liver .k 741 to 924 1 to 184       184/184
(100 %)
9 diff
(95.2 %id)
CB147582 Liver .k 741 to 1236 1 to 496   tiling clone,   496/496
(100 %)
3 diff
(99.4 %id)
CD642684 Embryonic Stem cells .k 863 to 1612 10 to 757   tiling clone,   748/769
(97 %)
6 diff
(99.3 %id)
DB155909 thymus .k 886 to 1484 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA331518 hippocampus .k 893 to 1449 2 to 558   capped   557/557
(100 %)
3 diff
(99.5 %id)
DB110831 thymus .k 1050 to 1512 2 to 464   capped   463/463
(100 %)
1 diff
(99.8 %id)
DA156449 amygdala .k 1226 to 1789 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA112369 cerebellum .k 1314 to 1857 2 to 545 exact tiling clone, capped   544/544
(100 %)
0 diff
(100 %id)
DB343074 thymus .k 1698 to 2282 585 to 1   tiling clone,   585/585
(100 %)
0 diff
(100 %id)
BF801923 colon_ins .k 1852 to 2190 1 to 340       340/340
(100 %)
7 diff
(98.0 %id)
BG255923 adenocarcinoma, cell line, Prostate .k 1890 to 2299 1 to 413   tiling clone,   413/413
(100 %)
5 diff
(98.8 %id)
AK001119 whole embryo, mainly body .l-u 1 to 1349 1 to 1349 exact tiling clone, available from FLJ,   1349/1349
(100 %)
0 diff
(100 %id)
AU120537 whole embryo, mainly body .l-u 2 to 804 2 to 803   capped   802/803
(99 %)
12 diff
(98.6 %id)
BF801913 colon_ins .l-u 654 to 1085 17 to 449 G15W R16Q T17D V18C C19V ...     433/449
(96 %)
6 diff
(98.7 %id)
AU146575 whole embryo, mainly body .l-u 805 to 1349 544 to 1       544/545
(99 %)
8 diff
(98.6 %id)
AW848479 colon .m-u 1 to 163 163 to 1 exact tiling clone,   163/163
(100 %)
0 diff
(100 %id)
R38093 whole brain Gene LPCAT4, variant not shown       AAA This clone was ignored    
T77013 whole brain Gene LPCAT4, variant not shown         This clone was ignored    
AW006462 colon Gene LPCAT4, variant not shown         Suspected internal deletion, this clone was ignored    
N84369   Gene LPCAT4, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u, .j, .k, .l-u, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C